Pregenerated sensors for NRG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032311Ensembl transcript IDs: ENSMUST00000130158.8, ENSMUST00000135531.2, ENSMUST00000137675.8, ENSMUST00000145784.8, ENSMUST00000164721.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTCTGCAGGGCGCCGCCTCCTTCCCCTGTGGCCTGCTTCACTCTaGCTTAGTGAGTGGCCTGGCTGCTTTGGAAGTCGTGTGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: WSAGRRLLPLWPASL*LSEWPGCFGSRVAE Trigger: CTCAGCCACACGACTTCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCACAGGGGAAGGAGGCGGCGCCCTGCAGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR CCA 90 bp | GATGTGCTGGACTCTTGGTCTGCAGGGCGCCGCCTCCTTCCCCTGTaGCCTGCTTCACTCTGGCTTAGTGAGTGGCCTGGCTGCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: DVLDSWSAGRRLLPL*PASLWLSEWPGCFG Trigger: TCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCACAGGGGAAGGAGGCGGCGCCCTGCAGACCAAGAGTCCAGCACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR TCA 90 bp | TTTGTCTCTACCAGGCTGATCTCACACTGGACTGAACTGGCCCTCTaGAGGTGGCCCTTCCTGCACAGGAAGCAGAGCGCCGCGATGGTA | + |
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Preference number: 1 (lower is better) Translates to: FVSTRLISHWTELAL*RWPFLHRKQSAAMV Trigger: TACCATCGCGGCGCTCTGCTTCCTGTGCAGGAAGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTGAGATCAGCCTGGTAGAGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135531.2 ENSMUST00000145784.8 |
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| 3UTR GCA 90 bp | CGCCGCGATGGTAAGAGTGAGGAGGACCGCCAGCACCACGAAAGCTaGCGACAGATTACTTTCGCTTGGGATGCTGGAGCTTGGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RRDGKSEEDRQHHES*RQITFAWDAGAWEK Trigger: TTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGGCGGTCCTCCTCACTCTTACCATCGCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR CCA 90 bp | GAGGACCGCCAGCACCACGAAAGCTGCCGACAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: EDRQHHESCRQITFA*DAGAWEKNLFAACS Trigger: GGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGGCGGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR CCA 90 bp | GGGCCACATGTCGTCTCTACAGGTGCTCTGCCATTAGAGTTTAGCTaGACTCTGGATGGCTGCTGGGGTGCAGGGCGAGGTAACATTGGG | + |
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Preference number: 1 (lower is better) Translates to: GPHVVSTGALPLEFS*TLDGCWGAGRGNIG Trigger: CCCAATGTTACCTCGCCCTGCACCCCAGCAGCCATCCAGAGTCCAGCTAAACTCTAATGGCAGAGCACCTGTAGAGACGACATGTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR CCA 90 bp | GGTGGGGATCACAGAGGGATCCTGGGTCTCTTTACACTGTGTTGTTaGCCCCTCACAGTGGACCCAGGCTGCCTGCTTCTAGCTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GGDHRGILGLFTLCC*PLTVDPGCLLLACV Trigger: AACACAAGCTAGAAGCAGGCAGCCTGGGTCCACTGTGAGGGGCCAACAACACAGTGTAAAGAGACCCAGGATCCCTCTGTGATCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR TCA 90 bp | CTCTGTGGCTGTGACGGGTTCTGGTATTGTTTGTCTCTACCAGGCTaGTCTCACACTGGACTGAACTGGCCCTCTGAAGGTGGCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LCGCDGFWYCLSLPG*SHTGLNWPSEGGPS Trigger: GGAAGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTGAGATCAGCCTGGTAGAGACAAACAATACCAGAACCCGTCACAGCCACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR GCA 90 bp | CTTCCCCTGTGGCCTGCTTCACTCTGGCTTAGTGAGTGGCCTGGCTaGTTTGGAAGTCGTGTGGCTGAGTTAAGTGGGATTATCCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: LPLWPASLWLSEWPG*FGSRVAELSGIILF Trigger: GAACAGGATAATCCCACTTAACTCAGCCACACGACTTCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCACAGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR CCA 90 bp | CCAGCACCACGAAAGCTGCCGACAGATTACTTTCGCTTGGGATGCTaGAGCTTGGGAGAAAAACCTCTTCGCAGCGTGCTCCGGTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: PAPRKLPTDYFRLGC*SLGEKPLRSVLRCN Trigger: ATTACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR CCA 90 bp | CAGAGATGTCAGTACTCCATTGTGGTGGGGATCACAGAGGGATCCTaGGTCTCTTTACACTGTGTTGTTGGCCCCTCACAGTGGACCCAG | + |
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Preference number: 1 (lower is better) Translates to: QRCQYSIVVGITEGS*VSLHCVVGPSQWTQ Trigger: CTGGGTCCACTGTGAGGGGCCAACAACACAGTGTAAAGAGACCCAGGATCCCTCTGTGATCCCCACCACAATGGAGTACTGACATCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CCA 90 bp | GTCTCAATGAATGAAAAGAAAGTACCAGAGGTTCAGTGGAAGCTCTaGGGAGAGATGGCCACTGGCTCTCGGAGCTCTGCTGCCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VSMNEKKVPEVQWKL*GEMATGSRSSAACQ Trigger: CTGGCAGGCAGCAGAGCTCCGAGAGCCAGTGGCCATCTCTCCCCAGAGCTTCCACTGAACCTCTGGTACTTTCTTTTCATTCATTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR GCA 90 bp | TTCGCTTGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTaGTCCGGTGTAATTTTCAATGCACCTTCCCAGGGTGCAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: FAWDAGAWEKNLFAA*SGVIFNAPSQGAGK Trigger: TTTCCCTGCACCCTGGGAAGGTGCATTGAAAATTACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR CCA 90 bp | TCCCTCACTTCTCTGCAGGTCTTCTGGACAACCCTGAACTTCGTGTaGTCCTTGTCTTTGGCTATAACTGCTGTAAGGTGGGAGCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: SLTSLQVFWTTLNFV*SLSLAITAVRWEPV Trigger: TACTGGCTCCCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGGGTTGTCCAGAAGACCTGCAGAGAAGTGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR TCA 90 bp | ATGCCCTTCACTGGGGATGTATGTCTTCAGTGTTCTCTGTGGCTGTaGCGGGTTCTGGTATTGTTTGTCTCTACCAGGCTGATCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: MPFTGDVCLQCSLWL*RVLVLFVSTRLISH Trigger: GTGTGAGATCAGCCTGGTAGAGACAAACAATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATACATCCCCAGTGAAGGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR GCA 90 bp | GCAGCAGCCCCTCAGTATCCACGTTTACATTGCACACTTTACTCATaGCTGCCTTCCCAACAATGGCGTGACCTTTGTTTGCTCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: AAAPQYPRLHCTLYS*LPSQQWRDLCLLCS Trigger: AGAACAGAGCAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATGAGTAAAGTGTGCAATGTAAACGTGGATACTGAGGGGCTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CCA 90 bp | CACGAAAGCTGCCGACAGATTACTTTCGCTTGGGATGCTGGAGCTTaGGAGAAAAACCTCTTCGCAGCGTGCTCCGGTGTAATTTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: HESCRQITFAWDAGA*EKNLFAACSGVIFN Trigger: ATTGAAAATTACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR TCA 90 bp | GAGTTTATTAAAAGGAGGTTTTCAATACCAGTTTCCGCACAGGGTTaGGAGACACTCAGAAAGTGGGCTCTGCAGAGGAGGGCCACATGT | + |
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Preference number: 1 (lower is better) Translates to: EFIKRRFSIPVSAQG*ETLRKWALQRRATC Trigger: ACATGTGGCCCTCCTCTGCAGAGCCCACTTTCTGAGTGTCTCTCAACCCTGTGCGGAAACTGGTATTGAAAACCTCCTTTTAATAAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR GCA 90 bp | CTTCGCAGCGTGCTCCGGTGTAATTTTCAATGCACCTTCCCAGGGTaGAGGGAAAATCTCATGACCCAACTTGGAATAAGACAAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LRSVLRCNFQCTFPG*RENLMTQLGIRQRE Trigger: TTCTCTTTGTCTTATTCCAAGTTGGGTCATGAGATTTTCCCTGCACCCTGGGAAGGTGCATTGAAAATTACACCGGAGCACGCTGCGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR GCA 90 bp | CACTTTACTCATGCCTGCCTTCCCAACAATGGCGTGACCTTTGTTTaGTCTGTTCTTATTGCTTGGAATATGGGCAGGTCACCTTGGACA | + |
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Preference number: 1 (lower is better) Translates to: HFTHACLPNNGVTFV*SVLIAWNMGRSPWT Trigger: TGTCCAAGGTGACCTGCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATGAGTAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CCA 90 bp | CTTCCCAACAATGGCGTGACCTTTGTTTGCTCTGTTCTTATTGCTTaGAATATGGGCAGGTCACCTTGGACACTGCAGAGATGTCAGTAC | + |
|
Preference number: 1 (lower is better) Translates to: LPNNGVTFVCSVLIA*NMGRSPWTLQRCQY Trigger: GTACTGACATCTCTGCAGTGTCCAAGGTGACCTGCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTGGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CCA 90 bp | TCAATGCACCTTCCCAGGGTGCAGGGAAAATCTCATGACCCAACTTaGAATAAGACAAAGAGAAGCCAGCAACAGTTCACTTCCCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: SMHLPRVQGKSHDPT*NKTKRSQQQFTSPD Trigger: ATCAGGGGAAGTGAACTGTTGCTGGCTTCTCTTTGTCTTATTCCAAGTTGGGTCATGAGATTTTCCCTGCACCCTGGGAAGGTGCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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| 3UTR GCA 90 bp | GTGCTTCTGGGACTCTGGTTTGTTAGACAAGGGTTGCCTCAAGAATaGATTTTCACTCCCTTGATCCAAGGAAAGTGGAAGTGGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: VLLGLWFVRQGLPQE*IFTPLIQGKWKWNL Trigger: AAGGTTCCACTTCCACTTTCCTTGGATCAAGGGAGTGAAAATGCATTCTTGAGGCAACCCTTGTCTAACAAACCAGAGTCCCAGAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR TCA 90 bp | TGGAATAAGACAAAGAGAAGCCAGCAACAGTTCACTTCCCCTGATTaGGCTGTCAGTGGAGAGGAGAGAGACTATACACATCACATGGTA | + |
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Preference number: 1 (lower is better) Translates to: WNKTKRSQQQFTSPD*AVSGEERDYTHHMV Trigger: TACCATGTGATGTGTATAGTCTCTCTCCTCTCCACTGACAGCTCAATCAGGGGAAGTGAACTGTTGCTGGCTTCTCTTTGTCTTATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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| 3UTR TCA 90 bp | TTTACATTGCACACTTTACTCATGCCTGCCTTCCCAACAATGGCGTaGCCTTTGTTTGCTCTGTTCTTATTGCTTGGAATATGGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: FTLHTLLMPAFPTMA*PLFALFLLLGIWAG Trigger: ACCTGCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATGAGTAAAGTGTGCAATGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR TCA 90 bp | TGTCAGTGGAGAGGAGAGAGACTATACACATCACATGGTATTTGGTaGTTTCATGATTTTTCACAGGTTTCTAGCCATCCCACCAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: CQWRGERLYTSHGIW*FHDFSQVSSHPTKD Trigger: ATCCTTGGTGGGATGGCTAGAAACCTGTGAAAAATCATGAAATCACCAAATACCATGTGATGTGTATAGTCTCTCTCCTCTCCACTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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| 3UTR GCA 90 bp | AAGGCTTATCAATTGCTGCTTTCTCTGTATACGAACAATGAAAAGTaGTTCTGGGACTCTGGTTTGTTAGACAAGGGTTGCCTCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: KAYQLLLSLYTNNEK*FWDSGLLDKGCLKN Trigger: ATTCTTGAGGCAACCCTTGTCTAACAAACCAGAGTCCCAGAAGCACTTTTCATTGTTCGTATACAGAGAAAGCAGCAATTGATAAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR GCA 90 bp | TGTCATCTCAAGCAAGGCTTAGATCTACCAACAAGGCTTATCAATTaGTGCTTTCTCTGTATACGAACAATGAAAAGTGCTTCTGGGACT | + |
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Preference number: 1 (lower is better) Translates to: CHLKQGLDLPTRLIN*CFLCIRTMKSASGT Trigger: AGTCCCAGAAGCACTTTTCATTGTTCGTATACAGAGAAAGCAGCAATTGATAAGCCTTGTTGGTAGATCTAAGCCTTGCTTGAGATGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CAA 90 bp | GGAGGACCGCCAGCACCACGAAAGCTGCCGACAGATTACTTTCGCTaGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GGPPAPRKLPTDYFR*GCWSLGEKPLRSVL Trigger: GAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGGCGGTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR CAA 90 bp | TGGGTAATTAAAACTGGAGGTCTCTGGCGTGTGTGGAGTTCGGTGTaGATGTGCTGGACTCTTGGTCTGCAGGGCGCCGCCTCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: WVIKTGGLWRVWSSV*MCWTLGLQGAASFP Trigger: GGGGAAGGAGGCGGCGCCCTGCAGACCAAGAGTCCAGCACATCAACACCGAACTCCACACACGCCAGAGACCTCCAGTTTTAATTACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTGTGACGGGTTCTGGTATTGTTTGTCTCTACCAGGCTGATCTCACACTGGTTCCACTCGGGCCCTaGACAGGAAGCAGAGCGCCG | + |
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Preference number: 2 (lower is better) Translates to: VAVTGSGIVCLYQADLTLVPLGP*TGSRAP Trigger: CGGCGCTCTGCTTCCTGTGCAGGGCCCGAGTGGAAC...CAGTGTGAGATCAGCCTGGTAGAGACAAACAATACCAGAACCCGTCACAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137675.8 |
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| 3UTR CAA 90 bp | TTGTGGTGGGGATCACAGAGGGATCCTGGGTCTCTTTACACTGTGTaGTTGGCCCCTCACAGTGGACCCAGGCTGCCTGCTTCTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LWWGSQRDPGSLYTV*LAPHSGPRLPASSL Trigger: CAAGCTAGAAGCAGGCAGCCTGGGTCCACTGTGAGGGGCCAACAACACAGTGTAAAGAGACCCAGGATCCCTCTGTGATCCCCACCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCCTGCTTCACTCTGGCTTAGTGAGTGGCCTGGCTGCTTTGGAAGTCGTTGTCCCTCACTTCTCTaGAGGTCTTCTGGACAACCC | + |
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Preference number: 2 (lower is better) Translates to: LWPASLWLSEWPGCFGSRCPSLL*RSSGQP Trigger: GGGTTGTCCAGAAGACCTGCAGAGAAGTGAGGGACA...ACGACTTCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCGTGTGTGGAGTTCGGTGTTGATGTGCTGGACTCTTGGTCTGCAGGGCGCGCACTTTCAGCGATATaGATATCATCTTGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LACVEFGVDVLDSWSAGRALSAI*ISSWLE Trigger: CTCCAGCCAAGATGATATTCATATCGCTGAAAGTGC...GCGCCCTGCAGACCAAGAGTCCAGCACATCAACACCGAACTCCACACACGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAACAATGGCGTGACCTTTGTTTGCTCTGTTCTTATTGCTTGGAATATGGGCGAAGGTGGCCCTTCCTaGACAGGAAGCAGAGCGCCG | + |
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Preference number: 2 (lower is better) Translates to: PNNGVTFVCSVLIAWNMGEGGPS*TGSRAP Trigger: CGGCGCTCTGCTTCCTGTGCAGGAAGGGCCACCTTC...GCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCTGCACCTTCCCAGGGTaGAGGGAAAATCTCATGACC | + |
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Preference number: 2 (lower is better) Translates to: GESLEFRASLIYTADFQACTFPG*RENLMT Trigger: GGTCATGAGATTTTCCCTGCACCCTGGGAAGGTGCA...GGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR-3UTR GCA 90 bp | ACCGCCAGCACCACGAAAGCTGCCGACAGATTACTTTCGCTTGGGATGCTGGAGTACTTTCGCTTGGGATaGTGGAGCTTGGGAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: TASTTKAADRLLSLGMLEYFRLG*WSLGEK Trigger: TTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTA...CTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGGCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCTCACTTCTCTGCAGGTCTTCTGGACAACCCTGAACTTCGTGTGGTCCGTGAGATCCTGGGACTaGCATAGAAATGATGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LSLTSLQVFWTTLNFVWSVRSWD*HRNDGT Trigger: TGTCCCATCATTTCTATGGCAGTCCCAGGATCTCAC...GGACCACACGAAGTTCAGGGTTGTCCAGAAGACCTGCAGAGAAGTGAGGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCTGCCTGCTTCTAGCTTGTGTTACAGGCAGAAGTTAACATGGACTTGTACAGGAAGTGGAAGGTaGGGCTTCCTGGTAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: PRLPASSLCYRQKLTWTCTGSGR*GFLVGT Trigger: AGTCCCTACCAGGAAGCCCCACCTTCCACTTCCTGT...ACAAGTCCATGTTAACTTCTGCCTGTAACACAAGCTAGAAGCAGGCAGCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTTTGTTTGCTCTGTTCTTATTGCTTGGAATATGGGCAGGTCACCTTGGACCTGGCAGCCAGTGGCTaGACAGGAAGTGGAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: DLCLLCSYCLEYGQVTLDLAASG*TGSGRW Trigger: CCACCTTCCACTTCCTGTCCAGCCACTGGCTGCCAG...GTCCAAGGTGACCTGCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCTGCTTCACTCTGGCTTAGTGAGTGGCCTGGCTGCTTTGGAAGTCGTGAATATCATCTTGGCTaGAGGCCAGGTGGACAATTT | + |
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Preference number: 2 (lower is better) Translates to: LWPASLWLSEWPGCFGSREYHLG*RPGGQF Trigger: AAATTGTCCACCTGGCCTCCAGCCAAGATGATATTC...ACGACTTCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR CAA 90 bp | CCACGAAAGCTGCCGACAGATTACTTTCGCTTGGGATGCTGGAGCTaGGGAGAAAAACCTCTTCGCAGCGTGCTCCGGTGTAATTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PRKLPTDYFRLGCWS*GEKPLRSVLRCNFQ Trigger: TTGAAAATTACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGGGATGTATGTCTTCAGTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTTCACTTCCCCTGATTaGGCTGTCAGTGGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLGMYVFSVLCGCDGFWYFTSPD*AVSGEE Trigger: CTCCTCTCCACTGACAGCTCAATCAGGGGAAGTGAA...ATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATACATCCCCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGTGACGGGTTCTGGTATTGTTTGTCTCTACCAGGCTGATCTCACACTGTGGGATGCTGGAGCTTaGGAGAAAAACCTCTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: VAVTGSGIVCLYQADLTLWDAGA*EKNLFA Trigger: TGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCA...CAGTGTGAGATCAGCCTGGTAGAGACAAACAATACCAGAACCCGTCACAGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| 3UTR-3UTR CCA 90 bp | ATTACTTTCGCTTGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTGCCAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ITFAWDAGAWEKNLFAACQITFA*DAGAWE Trigger: CTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTG...GCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR CAA 90 bp | CTGCAGGTCTTCTGGACAACCCTGAACTTCGTGTGGTCCTTGTCTTaGGCTATAACTGCTGTAAGGTGGGAGCCAGTAATTACCTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LQVFWTTLNFVWSLS*AITAVRWEPVITCI Trigger: GATGCAGGTAATTACTGGCTCCCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGGGTTGTCCAGAAGACCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTCTTTACACTGTGTTGTTGGCCCCTCACAGTGGACCCAGGCTGCCTGCTTTCTCATGACCCAACTTaGAATAAGACAAAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GLFTLCCWPLTVDPGCLLSHDPT*NKTKRS Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGTCATGAGA...AAGCAGGCAGCCTGGGTCCACTGTGAGGGGCCAACAACACAGTGTAAAGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTGTTTGTCTCTACCAGGCTGATCAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VFSVAVTGSGIVCLYQADQITFA*DAGAWE Trigger: CTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTG...ATCAGCCTGGTAGAGACAAACAATACCAGAACCCGTCACAGCCACAGAGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGATGAACAATCAAACAGTAGAGCATCAAGAAGAGTGAGATCCTGGGACTGCCACACTGGACTGAACTaGCCCTCTGAAGGTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: NDEQSNSRASRRVRSWDCHTGLN*PSEGGP Trigger: AGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTG...GCAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTGTTCATCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACTGAGGGGGAGGTGTGTAAGCAGCAGCCCCTCAGTATCCACGTTTACATTGTTGATCCAAGGAAAGTaGAAGTGGAACCTTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RLRGRCVSSSPSVSTFTLLIQGK*KWNLEA Trigger: GGCTTCAAGGTTCCACTTCCACTTTCCTTGGATCAA...CAATGTAAACGTGGATACTGAGGGGCTGCTGCTTACACACCTCCCCCTCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAAAGTACCAGAGGTTCAGTGGAAGCTCTGGGGAGAGATGGCCACTGGCTCATAACTGCTGTAAGGTaGGAGCCAGTAATTACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KESTRGSVEALGRDGHWLITAVR*EPVITC Trigger: GCAGGTAATTACTGGCTCCCACCTTACAGCAGTTAT...GAGCCAGTGGCCATCTCTCCCCAGAGCTTCCACTGAACCTCTGGTACTTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CAA 90 bp | ACTTCTCTGCAGGTCTTCTGGACAACCCTGAACTTCGTGTGGTCCTaGTCTTTGGCTATAACTGCTGTAAGGTGGGAGCCAGTAATTACC | + |
|
Preference number: 2 (lower is better) Translates to: TSLQVFWTTLNFVWS*SLAITAVRWEPVIT Trigger: GGTAATTACTGGCTCCCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGGGTTGTCCAGAAGACCTGCAGAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCTCAGTATCCACGTTTACATTGCACACTTTACTCATGCCTGCCTTCCCAACCCAGCTTTCTATGTGTaGATGCTTGTCCTTCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PLSIHVYIAHFTHACLPNPAFYV*MLVLPH Trigger: GTGAGGAAGGACAAGCATTCACACATAGAAAGCTGG...GTTGGGAAGGCAGGCATGAGTAAAGTGTGCAATGTAAACGTGGATACTGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATGTATGTCTTCAGTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTGTTTGTTGCACCTTCCCAGGGTaGAGGGAAAATCTCATGACC | + |
|
Preference number: 2 (lower is better) Translates to: GCMSSVFSVAVTGSGIVCCTFPG*RENLMT Trigger: GGTCATGAGATTTTCCCTGCACCCTGGGAAGGTGCA...ACAAACAATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGTGATGGTGAGATCCTGGGACTaGCATAGAAATGATGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: LLNSGPALSILLTSRPVMVRSWD*HRNDGT Trigger: TGTCCCATCATTTCTATGGCAGTCCCAGGATCTCAC...CATCACTGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTGTGGTGGGGATCACAGAGGGATCCTGGGTCTCTTTACACTGTGTTGTTGAATGATGCCCTTCACTaGGGATGTATGTCTTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PLWWGSQRDPGSLYTVLLNDALH*GCMSSV Trigger: CACTGAAGACATACATCCCCAGTGAAGGGCATCATT...CAACAACACAGTGTAAAGAGACCCAGGATCCCTCTGTGATCCCCACCACAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATTACTTTCGCTTGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTTACTTTCGCTTGGGATaGTGGAGCTTGGGAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLLSLGMLELGRKTSSQRYFRLG*WSLGEK Trigger: TTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTA...ACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR CAA 90 bp | TACCTGCATCGGGTAGTCAGCACTTTCAGCGATATGAATATCATCTaGGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTACTTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: YLHRVVSTFSDMNII*AGGQVDNLSSLTCE Trigger: CTCACAAGTAAGTGAAGACAAATTGTCCACCTGGCCTCCAGCCAAGATGATATTCATATCGCTGAAAGTGCTGACTACCCGATGCAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAGCAGCCCCTCAGTATCCACGTTTACATTGCACACTTTACTCATGCCTGCAGAAATGCCAACTGCTaGTACTTAACGAAGCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KQQPLSIHVYIAHFTHACRNANC*YLTKLQ Trigger: TTGCAGCTTCGTTAAGTATCAGCAGTTGGCATTTCT...GCAGGCATGAGTAAAGTGTGCAATGTAAACGTGGATACTGAGGGGCTGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAACCTCTTCGCAGCGTGCTCCGGTGTAATTTTCAATGCACCTTCCCAGGGTCTCATGACCCAACTTaGAATAAGACAAAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: EKPLRSVLRCNFQCTFPGSHDPT*NKTKRS Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGTCATGAGA...CCCTGGGAAGGTGCATTGAAAATTACACCGGAGCACGCTGCGAAGAGGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGTGATGAGAAGAGTGAGATCCTaGGACTGCCATAGAAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLNSGPALSILLTSRPVMRRVRS*DCHRND Trigger: ATCATTTCTATGGCAGTCCCAGGATCTCACTCTTCT...CATCACTGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| 3UTR CAA 90 bp | CCTTTAATTCCAGTAACTCTGAGTAGGCAAAAACAGGTGAGTCTCTaGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLIPVTLSRQKQVSL*NSGPALSILLTSRP Trigger: TGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACCTGTTTTTGCCTACTCAGAGTTACTGGAATTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| 3UTR CAA 90 bp | AGAGTCTCTGAGATTATCATGTTAAAAACCTCCTTAAAGGAGATTTaGTGGCCCTCTTCTGAGCCAAAGGGGTGGATCAGGCGTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVSEIIMLKTSLKEI*WPSSEPKGWIRRCP Trigger: AGGACAACGCCTGATCCACCCCTTTGGCTCAGAAGAGGGCCACAAAATCTCCTTTAAGGAGGTTTTTAACATGATAATCTCAGAGACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTTGGAAGTCGTGTGGCTGAGTTAAGTGGGATTATCCTGTTCAACACTGACACCCTGAACTTCGTGTaGTCCTTGTCTTTGGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: CFGSRVAELSGIILFNTDTLNFV*SLSLAI Trigger: TATAGCCAAAGACAAGGACCACACGAAGTTCAGGGT...GTCAGTGTTGAACAGGATAATCCCACTTAACTCAGCCACACGACTTCCAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR-3UTR GCA 90 bp | GCGTCATTTCTGTATGTGAACGATGAACAATCAAACAGTAGAGCATCAAGAAGATGCACCTTCCCAGGGTaGAGGGAAAATCTCATGACC | + |
|
Preference number: 2 (lower is better) Translates to: ASFLYVNDEQSNSRASRRCTFPG*RENLMT Trigger: GGTCATGAGATTTTCCCTGCACCCTGGGAAGGTGCA...TCTTCTTGATGCTCTACTGTTTGATTGTTCATCGTTCACATACAGAAATGACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGTGATTTGAGCACAGTAGTGAAGGCATGCTCACATACTGAGCTGTCATCTTTTCGCTTGGGATGCTaGAGCTTGGGAGAAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: KSDLSTVVKACSHTELSSFRLGC*SLGEKP Trigger: AGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAA...AGATGACAGCTCAGTATGTGAGCATGCCTTCACTACTGTGCTCAAATCACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTGCTTAATGTGGCAGAGAACTGAATGCTGCTGGAATAGAAGGTATTGTCCTCAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: NCLMWQRTECCWNRRYCPQITFA*DAGAWE Trigger: CTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTG...AGGACAATACCTTCTATTCCAGCAGCATTCAGTTCTCTGCCACATTAAGCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATGTCTTCAGTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTGTTTGTCTTCTCATGACCCAACTTaGAATAAGACAAAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: MYVFSVLCGCDGFWYCLSSHDPT*NKTKRS Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGTCATGAGA...AGACAAACAATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAACCTTGAAGCCGAGGTATAGATATCCAGAACCATTACCTGTACAGAAAAGTCGTCATTTCTGTATGTaGACGATGAACAATCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: GTLKPRYRYPEPLPVQKSRHFCM*TMNNQT Trigger: TGTTTGATTGTTCATCGTTCACATACAGAAATGACG...ACTTTTCTGTACAGGTAATGGTTCTGGATATCTATACCTCGGCTTCAAGGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR CCA 72 bp | GGGCGCCGCCTCCTTCCCCTGTGGCCTGCTTCACTCTaGCTTAGTGAGTGGCCTGGCTGCTTTGGAAGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: GRRLLPLWPASL*LSEWPGCFGSR Trigger: ACGACTTCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCACAGGGGAAGGAGGCGGCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR TCA 72 bp | ACCAGGCTGATCTCACACTGGACTGAACTGGCCCTCTaGAGGTGGCCCTTCCTGCACAGGAAGCAGAGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: TRLISHWTELAL*RWPFLHRKQSA Trigger: GGCGCTCTGCTTCCTGTGCAGGAAGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTGAGATCAGCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135531.2 ENSMUST00000145784.8 |
||
| 3UTR CCA 72 bp | AGAGGTTCAGTGGAAGCTCTGGGGAGAGATGGCCACTaGCTCTCGGAGCTCTGCTGCCTGCCAGTGATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RGSVEALGRDGH*LSELCCLPVMQ Trigger: TTGCATCACTGGCAGGCAGCAGAGCTCCGAGAGCCAGTGGCCATCTCTCCCCAGAGCTTCCACTGAACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | AAGTACCAGAGGTTCAGTGGAAGCTCTGGGGAGAGATaGCCACTGGCTCTCGGAGCTCTGCTGCCTGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KYQRFSGSSGER*PLALGALLPAS Trigger: ACTGGCAGGCAGCAGAGCTCCGAGAGCCAGTGGCCATCTCTCCCCAGAGCTTCCACTGAACCTCTGGTACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR GCA 72 bp | CTGGGGAGAGATGGCCACTGGCTCTCGGAGCTCTGCTaGCTGCCAGTGATGCAAGCTGCTTTAAGACCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGRDGHWLSELC*LPVMQAALRPH Trigger: ATGTGGTCTTAAAGCAGCTTGCATCACTGGCAGGCAGCAGAGCTCCGAGAGCCAGTGGCCATCTCTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR GCA 72 bp | CCGCACAGGGTTGAGAGACACTCAGAAAGTGGGCTCTaGAGAGGAGGGCCACATGTCGTCTCTACAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PHRVERHSESGL*RGGPHVVSTGA Trigger: AGCACCTGTAGAGACGACATGTGGCCCTCCTCTGCAGAGCCCACTTTCTGAGTGTCTCTCAACCCTGTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | GTCGTCTCTACAGGTGCTCTGCCATTAGAGTTTAGCTaGACTCTGGATGGCTGCTGGGGTGCAGGGCGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VVSTGALPLEFS*TLDGCWGAGRG Trigger: ACCTCGCCCTGCACCCCAGCAGCCATCCAGAGTCCAGCTAAACTCTAATGGCAGAGCACCTGTAGAGACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR GCA 72 bp | GGTAAGAGTGAGGAGGACCGCCAGCACCACGAAAGCTaGCGACAGATTACTTTCGCTTGGGATGCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GKSEEDRQHHES*RQITFAWDAGA Trigger: AGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGGCGGTCCTCCTCACTCTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR GCA 72 bp | GCTCTCGGAGCTCTGCTGCCTGCCAGTGATGCAAGCTaGTTTAAGACCACATCTGAGAAGATAAGCTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALGALLPASDAS*FKTTSEKISSR Trigger: CCTCGAGCTTATCTTCTCAGATGTGGTCTTAAAGCAGCTTGCATCACTGGCAGGCAGCAGAGCTCCGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR GCA 72 bp | TGGCCTGCTTCACTCTGGCTTAGTGAGTGGCCTGGCTaGTTTGGAAGTCGTGTGGCTGAGTTAAGTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: WPASLWLSEWPG*FGSRVAELSGI Trigger: AATCCCACTTAACTCAGCCACACGACTTCCAAAGCAGCCAGGCCACTCACTAAGCCAGAGTGAAGCAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | TGCCGACAGATTACTTTCGCTTGGGATGCTGGAGCTTaGGAGAAAAACCTCTTCGCAGCGTGCTCCGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: CRQITFAWDAGA*EKNLFAACSGV Trigger: TACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR CCA 72 bp | CGAAAGCTGCCGACAGATTACTTTCGCTTGGGATGCTaGAGCTTGGGAGAAAAACCTCTTCGCAGCGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RKLPTDYFRLGC*SLGEKPLRSVL Trigger: GAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR CCA 72 bp | AAGGAGATTTTGTGGCCCTCTTCTGAGCCAAAGGGGTaGATCAGGCGTTGTCCTGCTGCTGACCGGAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: KEILWPSSEPKG*IRRCPAADRNV Trigger: TACATTCCGGTCAGCAGCAGGACAACGCCTGATCCACCCCTTTGGCTCAGAAGAGGGCCACAAAATCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR CCA 72 bp | CAGTACTCCATTGTGGTGGGGATCACAGAGGGATCCTaGGTCTCTTTACACTGTGTTGTTGGCCCCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: QYSIVVGITEGS*VSLHCVVGPSQ Trigger: CTGTGAGGGGCCAACAACACAGTGTAAAGAGACCCAGGATCCCTCTGTGATCCCCACCACAATGGAGTACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTGAGGGGGAGGTGTGTAAGCAGCAGCCCCTCAGTATCCACGTTTACATTGTATGGGCAGGTCACCTaGGACACTGCAGAGATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RLRGRCVSSSPSVSTFTLYGQVT*DTAEMS Trigger: TGACATCTCTGCAGTGTCCAAGGTGACCTGCCCATA...CAATGTAAACGTGGATACTGAGGGGCTGCTGCTTACACACCTCCCCCTCAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | GATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTaGTCCGGTGTAATTTTCAATGCACCTTCCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DAGAWEKNLFAA*SGVIFNAPSQG Trigger: ACCCTGGGAAGGTGCATTGAAAATTACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR GCA 72 bp | CTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTaGAAGGTCAACACAGGAAACCAGCGTCATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTSRPVMTVAG*KVNTGNQRHFC Trigger: ACAGAAATGACGCTGGTTTCCTGTGTTGACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | CAGCACCACGAAAGCTGCCGACAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: QHHESCRQITFA*DAGAWEKNLFA Trigger: TGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCTTGGGATGCTGGAGCTaGGGAGAAAAACCTCTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GESLEFRASLIYTADFQALGCWS*GEKPLR Trigger: GCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAA...GGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR TCA 72 bp | ATTGTTTGTCTCTACCAGGCTGATCTCACACTGGACTaGACTGGCCCTCTGAAGGTGGCCCTTCCACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IVCLYQADLTLD*TGPLKVALPLL Trigger: AAGAAGTGGAAGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTGAGATCAGCCTGGTAGAGACAAACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137675.8 |
||
| 3UTR TCA 72 bp | TGTGACGGGTTCTGGTATTGTTTGTCTCTACCAGGCTaGTCTCACACTGGACTGAACTGGCCCTCTGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CDGFWYCLSLPG*SHTGLNWPSEG Trigger: ACCTTCAGAGGGCCAGTTCAGTCCAGTGTGAGATCAGCCTGGTAGAGACAAACAATACCAGAACCCGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR GCA 72 bp | ACACTGGGAGTGCCAGTCAACAGGAGCAACAGTTCATaGTGTTTAAGGCTGTCTCTGTCCCTCACTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLGVPVNRSNSS*CLRLSLSLTSL Trigger: CAGAGAAGTGAGGGACAGAGACAGCCTTAAACAGCATGAACTGTTGCTCCTGTTGACTGGCACTCCCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | CCACAGTCCGCCTTTGTAGGTAATGATGCCCTTCACTaGGGATGTATGTCTTCAGTGTTCTCTGTGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PQSAFVGNDALH*GCMSSVFSVAV Trigger: CACAGCCACAGAGAACACTGAAGACATACATCCCCAGTGAAGGGCATCATTACCTACAAAGGCGGACTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR CCA 72 bp | GTCTCAATGAATGAAAAGAAAGTACCAGAGGTTCAGTaGAAGCTCTGGGGAGAGATGGCCACTGGCTCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: VSMNEKKVPEVQ*KLWGEMATGSR Trigger: CCGAGAGCCAGTGGCCATCTCTCCCCAGAGCTTCCACTGAACCTCTGGTACTTTCTTTTCATTCATTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR TCA 72 bp | AAAAGGAGGTTTTCAATACCAGTTTCCGCACAGGGTTaGGAGACACTCAGAAAGTGGGCTCTGCAGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRRFSIPVSAQG*ETLRKWALQRR Trigger: CCTCCTCTGCAGAGCCCACTTTCTGAGTGTCTCTCAACCCTGTGCGGAAACTGGTATTGAAAACCTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | CAATCAAACAGTAGAGCATCAAGAAGAGTGAGATCCTaGGACTTCTCTCGTCGTATGGTCCACAGTCCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QSNSRASRRVRS*DFSRRMVHSPP Trigger: AGGCGGACTGTGGACCATACGACGAGAGAAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR CCA 72 bp | TCTCTGCAGGTCTTCTGGACAACCCTGAACTTCGTGTaGTCCTTGTCTTTGGCTATAACTGCTGTAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLQVFWTTLNFV*SLSLAITAVRW Trigger: CCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGGGTTGTCCAGAAGACCTGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | AAGCTCGAGGTCACTGGTGTGCGAGGAATGAAGATGTaGAGCTGGCACTGCAGTTATTCACTTCAACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: KLEVTGVRGMKM*SWHCSYSLQHV Trigger: GACATGTTGAAGTGAATAACTGCAGTGCCAGCTCCACATCTTCATTCCTCGCACACCAGTGACCTCGAGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CCA 72 bp | CATTGGGTAATTAAAACTGGAGGTCTCTGGCGTGTGTaGAGTTCGGTGTTGATGTGCTGGACTCTTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HWVIKTGGLWRV*SSVLMCWTLGL Trigger: CAGACCAAGAGTCCAGCACATCAACACCGAACTCCACACACGCCAGAGACCTCCAGTTTTAATTACCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR TCA 72 bp | TGGAGGCCAGGTGGACAATTTGTCTTCACTTACTTGTaGGAAGTAAGCCTGAGTACTTTGCTCTTCCCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: WRPGGQFVFTYL*EVSLSTLLFPR Trigger: ACGGGGGAAGAGCAAAGTACTCAGGCTTACTTCTCACAAGTAAGTGAAGACAAATTGTCCACCTGGCCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR GCA 72 bp | CAGAACCATTACCTGTACAGAAAAGTACAGGCGGCCTaGATTCACGGTGTAATTCAGGTGTGCCACTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QNHYLYRKVQAA*IHGVIQVCHCS Trigger: AGAACAGTGGCACACCTGAATTACACCGTGAATGCAGGCCGCCTGTACTTTTCTGTACAGGTAATGGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | CATGCCTGCCTTCCCAACAATGGCGTGACCTTTGTTTaGTCTGTTCTTATTGCTTGGAATATGGGCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HACLPNNGVTFV*SVLIAWNMGRS Trigger: TGACCTGCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR CCA 72 bp | GAGGTCACTGGTGTGCGAGGAATGAAGATGTGGAGCTaGCACTGCAGTTATTCACTTCAACATGTCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: EVTGVRGMKMWS*HCSYSLQHVCV Trigger: TACACAGACATGTTGAAGTGAATAACTGCAGTGCCAGCTCCACATCTTCATTCCTCGCACACCAGTGACCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCTTGAAGCCGAGGTATAGATATCCAGAACCATTACCTGTACAGAAAAGTTTGGGATGCTGGAGCTaGGGAGAAAAACCTCTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GTLKPRYRYPEPLPVQKSLGCWS*GEKPLR Trigger: GCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAA...ACTTTTCTGTACAGGTAATGGTTCTGGATATCTATACCTCGGCTTCAAGGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | TGTCCTCTTAACAGCCCATTACCAGCTTTCTATGTGTaGATGCTTGTCCTTCCTCACCTGCCCAAAAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CPLNSPLPAFYV*MLVLPHLPKRV Trigger: GACTCTTTTGGGCAGGTGAGGAAGGACAAGCATTCACACATAGAAAGCTGGTAATGGGCTGTTAAGAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | ACAAAGAGAAGCCAGCAACAGTTCACTTCCCCTGATTaGGCTGTCAGTGGAGAGGAGAGAGACTATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: TKRSQQQFTSPD*AVSGEERDYTH Trigger: ATGTGTATAGTCTCTCTCCTCTCCACTGACAGCTCAATCAGGGGAAGTGAACTGTTGCTGGCTTCTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
||
| 3UTR GCA 72 bp | GTGCTCCGGTGTAATTTTCAATGCACCTTCCCAGGGTaGAGGGAAAATCTCATGACCCAACTTGGAATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLRCNFQCTFPG*RENLMTQLGIR Trigger: TCTTATTCCAAGTTGGGTCATGAGATTTTCCCTGCACCCTGGGAAGGTGCATTGAAAATTACACCGGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR GCA 72 bp | CAACAATGGCGTGACCTTTGTTTGCTCTGTTCTTATTaGTTGGAATATGGGCAGGTCACCTTGGACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QQWRDLCLLCSY*LEYGQVTLDTA Trigger: TGCAGTGTCCAAGGTGACCTGCCCATATTCCAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | CCTCAGTATCCACGTTTACATTGCACACTTTACTCATaGCTGCCTTCCCAACAATGGCGTGACCTTTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PQYPRLHCTLYS*LPSQQWRDLCL Trigger: CAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATGAGTAAAGTGTGCAATGTAAACGTGGATACTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | ACGATGAACAATCAAACAGTAGAGCATCAAGAAGAGTaGGATCCTGGGACTTCTCTCGTCGTATGGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TMNNQTVEHQEE*DPGTSLVVWST Trigger: TGTGGACCATACGACGAGAGAAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTGTTCATCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | GGACTCTGGTTTGTTAGACAAGGGTTGCCTCAAGAATaGATTTTCACTCCCTTGATCCAAGGAAAGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLWFVRQGLPQE*IFTPLIQGKWK Trigger: CTTCCACTTTCCTTGGATCAAGGGAGTGAAAATGCATTCTTGAGGCAACCCTTGTCTAACAAACCAGAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | AGTATCCACGTTTACATTGCACACTTTACTCATGCCTaGCTTCCCAACAATGGCGTGACCTTTGTTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SIHVYIAHFTHA*LPNNGVTFVCS Trigger: AGAGCAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATGAGTAAAGTGTGCAATGTAAACGTGGATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR CCA 72 bp | CATTGCACACTTTACTCATGCCTGCCTTCCCAACAATaGCGTGACCTTTGTTTGCTCTGTTCTTATTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HCTLYSCLPSQQ*RDLCLLCSYCL Trigger: CAAGCAATAAGAACAGAGCAAACAAAGGTCACGCCATTGTTGGGAAGGCAGGCATGAGTAAAGTGTGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | ACGATGAACAATCAAACAGTAGAGCATCAAGAAGAGTaGGATCCTGGGACTGCCATAGAAATGATGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: TMNNQTVEHQEE*DPGTAIEMMGH Trigger: GTGTCCCATCATTTCTATGGCAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTGTTCATCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| 3UTR TCA 72 bp | GGATTATCCTGTTCAACACTGACTGGTCTCAATGAATaGAAAGAAAGTACCAGAGGTTCAGTGGAAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLSCSTLTGLNE*KESTRGSVEAL Trigger: CAGAGCTTCCACTGAACCTCTGGTACTTTCTTTTCATTCATTGAGACCAGTCAGTGTTGAACAGGATAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR TCA 72 bp | AGTGGGATTATCCTGTTCAACACTGACTGGTCTCAATaGATGAAAAGAAAGTACCAGAGGTTCAGTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGIILFNTDWSQ*MKRKYQRFSGS Trigger: GCTTCCACTGAACCTCTGGTACTTTCTTTTCATTCATTGAGACCAGTCAGTGTTGAACAGGATAATCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR GCA 72 bp | TCCTTCGTTAATTGCTTAATGTGGCAGAGAACTGAATaGTGCTGGAATAGAAGGTATTGTCCTCTTAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SFVNCLMWQRTE*CWNRRYCPLNS Trigger: GCTGTTAAGAGGACAATACCTTCTATTCCAGCAGCATTCAGTTCTCTGCCACATTAAGCAATTAACGAAGGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | AATGCTTGTCCTTCCTCACCTGCCCAAAAGAGTCTCTaGGATTATCATGTTAAAAACCTCCTTAAAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NACPSSPAQKSL*DYHVKNLLKGD Trigger: ATCTCCTTTAAGGAGGTTTTTAACATGATAATCTCAGAGACTCTTTTGGGCAGGTGAGGAAGGACAAGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | GGCTTATCAATTGCTGCTTTCTCTGTATACGAACAATaGAAAGTGCTTCTGGGACTCTGGTTTGTTAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GLSIAAFSVYEQ*KVLLGLWFVRQ Trigger: TTGTCTAACAAACCAGAGTCCCAGAAGCACTTTTCATTGTTCGTATACAGAGAAAGCAGCAATTGATAAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | CAAGGCTTAGATCTACCAACAAGGCTTATCAATTGCTaGTTTCTCTGTATACGAACAATGAAAAGTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGLDLPTRLINC*FLCIRTMKSAS Trigger: AGAAGCACTTTTCATTGTTCGTATACAGAGAAAGCAGCAATTGATAAGCCTTGTTGGTAGATCTAAGCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR GCA 72 bp | AGCTTGTGTTACAGGCAGAAGTTAACATGGACTTGTTaGAGGATGTTCTTACAAGGTAACATTTCTGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SLCYRQKLTWTC*RMFLQGNISVL Trigger: CAATACAGAAATGTTACCTTGTAAGAACATCCTGCAACAAGTCCATGTTAACTTCTGCCTGTAACACAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| 3UTR TCA 72 bp | CTGTGTATAGCACTCTGCAAAATGCCCTTGCTTATGTaGGGCATATTACATTCAAATAGCCATAGGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LCIALCKMPLLM*GILHSNSHRFY Trigger: ATAAAACCTATGGCTATTTGAATGTAATATGCCTCACATAAGCAAGGGCATTTTGCAGAGTGCTATACACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTCTGAAGGTGGCCCTTCCTGCACAGGAAGCAGAGCGCCGCGATGGTAAGCCCATTGAGGCAAAATaGCCTGTGCCTGGGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GPLKVALPAQEAERRDGKPIEAK*PVPGTT Trigger: TGTGGTCCCAGGCACAGGTCATTTTGCCTCAATGGG...CTTACCATCGCGGCGCTCTGCTTCCTGTGCAGGAAGGGCCACCTTCAGAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135531.2 ENSMUST00000145784.8 |
||
| 3UTR CAA 72 bp | AAAACTGGAGGTCTCTGGCGTGTGTGGAGTTCGGTGTaGATGTGCTGGACTCTTGGTCTGCAGGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTGGLWRVWSSV*MCWTLGLQGAA Trigger: GGCGGCGCCCTGCAGACCAAGAGTCCAGCACATCAACACCGAACTCCACACACGCCAGAGACCTCCAGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| CDS-3UTR GCA 90 bp | TTTCGCTTGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTGCTCCGGAGGCAAAATGACCTGTaGCTGGGACCACAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLGCWSLGEKPLRSVLRRQNDL*LGPQGC Trigger: GCAGCCCTGTGGTCCCAGGCACAGGTCATTTTGCCT...CCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| 3UTR CAA 72 bp | GGATCACAGAGGGATCCTGGGTCTCTTTACACTGTGTaGTTGGCCCCTCACAGTGGACCCAGGCTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQRDPGSLYTV*LAPHSGPRLPA Trigger: AGCAGGCAGCCTGGGTCCACTGTGAGGGGCCAACAACACAGTGTAAAGAGACCCAGGATCCCTCTGTGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| CDS-3UTR TCA 90 bp | CGTGTGTGGAGTTCGGTGTTGATGTGCTGGACTCTTGGTCTGCAGGGCGCCGCCTGTTCTCTGTGGCTGTaGCGGGTTCTGGTATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVWSSVLMCWTLGLQGAACSLWL*RVLVLF Trigger: AAACAATACCAGAACCCGTCACAGCCACAGAGAACA...GGCGGCGCCCTGCAGACCAAGAGTCCAGCACATCAACACCGAACTCCACACACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
||
| 3UTR CAA 72 bp | CTGCCGACAGATTACTTTCGCTTGGGATGCTGGAGCTaGGGAGAAAAACCTCTTCGCAGCGTGCTCCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTDYFRLGCWS*GEKPLRSVLRC Trigger: ACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| CDS-3UTR GCA 90 bp | GGTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGGCAAAATGACCTGTaGCTGGGACCACAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GESLEFRASLIYTADFQARQNDL*LGPQGC Trigger: GCAGCCCTGTGGTCCCAGGCACAGGTCATTTTGCCT...GGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| CDS-3UTR GCA 90 bp | CAGATTACTTTCGCTTGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGAGGCAAAATGACCTGTaGCTGGGACCACAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QITFAWDAGAWEKNLFAARQNDL*LGPQGC Trigger: GCAGCCCTGTGGTCCCAGGCACAGGTCATTTTGCCT...CGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| CDS-3UTR GCA 90 bp | TTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGTGATGACAGAAGGTGGCCCTTCCTaGACAGGAAGCAGAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPALSILLTSRPVMTEGGPS*TGSRAP Trigger: CGGCGCTCTGCTTCCTGTGCAGGAAGGGCCACCTTC...TGTCATCACTGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
||
| 3UTR CAA 72 bp | CCAGCACCACGAAAGCTGCCGACAGATTACTTTCGCTaGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPRKLPTDYFR*GCWSLGEKPLR Trigger: GCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAGCTTTCGTGGTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATACTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTGCAAGGTCAACACACTGGACTGAACTaGCCCTCTGAAGGTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYTADFQASDDSSRVQGQHTGLN*PSEGGP Trigger: AGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTG...TTGACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAGTATAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCGACAGATTACTTTCGCTTGGGATGCTGGAGCTTGGGAGAAAAACCTCTTCAGGAACACACTGCATaGGAACTTGGGGCGCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTDYFRLGCWSLGEKPLQEHTA*ELGARQ Trigger: TTGACGCGCCCCAAGTTCTCATGCAGTGTGTTCCTG...AAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTGTCGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
||
| CDS-3UTR GCA 90 bp | AACGATGAACAATCAAACAGTAGAGCATCAAGAAGAGTGAGATCCTGGGACTGCGAAGGTGGCCCTTCCTaGACAGGAAGCAGAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NDEQSNSRASRRVRSWDCEGGPS*TGSRAP Trigger: CGGCGCTCTGCTTCCTGTGCAGGAAGGGCCACCTTC...GCAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTGTTCATCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCAGTATCCACGTTTACATTGCACACTTTACTCATGCCTGCCTTCCCAAAAAATGACCTGTGCCTaGGACCACAGGGCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: APQYPRLHCTLYSCLPSQKMTCA*DHRAAR Trigger: ACGAGCAGCCCTGTGGTCCCAGGCACAGGTCATTTT...TTGGGAAGGCAGGCATGAGTAAAGTGTGCAATGTAAACGTGGATACTGAGGGGC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
||
| CDS-3UTR CCA 90 bp | CACTGGGGATGTATGTCTTCAGTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTAAAATGACCTGTGCCTaGGACCACAGGGCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HWGCMSSVFSVAVTGSGIKMTCA*DHRAAR Trigger: ACGAGCAGCCCTGTGGTCCCAGGCACAGGTCATTTT...AATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATACATCCCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTAACTCTGAGTAGGCAAAAACAGGTGAGTCTCTTGAATTCAGGGCCAGCCAAAATGACCTGTGCCTaGGACCACAGGGCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVTLSRQKQVSLLNSGPAKMTCA*DHRAAR Trigger: ACGAGCAGCCCTGTGGTCCCAGGCACAGGTCATTTT...GGCTGGCCCTGAATTCAAGAGACTCACCTGTTTTTGCCTACTCAGAGTTACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGTGATCCCATTGAGGCAAAATaGCCTGTGCCTGGGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLEFRASLIYTADFQASDPIEAK*PVPGTT Trigger: TGTGGTCCCAGGCACAGGTCATTTTGCCTCAATGGG...ATCACTGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
||
| CDS-3UTR CCA 90 bp | TTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGTGATGACAAAAATGACCTGTGCCTaGGACCACAGGGCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPALSILLTSRPVMTKMTCA*DHRAAR Trigger: ACGAGCAGCCCTGTGGTCCCAGGCACAGGTCATTTT...TGTCATCACTGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | GATGACAGTAGCAGGGTGCAAGGTCAACACAGGAAACCAGCGTCATTTCTGTATAAAATGACCTGTGCCTaGGACCACAGGGCTGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: DDSSRVQGQHRKPASFLYKMTCA*DHRAAR Trigger: ACGAGCAGCCCTGTGGTCCCAGGCACAGGTCATTTT...ATACAGAAATGACGCTGGTTTCCTGTGTTGACCTTGCACCCTGCTACTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
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| 3UTR CAA 72 bp | CAGGTCTTCTGGACAACCCTGAACTTCGTGTGGTCCTaGTCTTTGGCTATAACTGCTGTAAGGTGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QVFWTTLNFVWS*SLAITAVRWEP Trigger: TGGCTCCCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGGGTTGTCCAGAAGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| CDS-3UTR TCA 90 bp | AGTCGTGTGGCTGAGTTAAGTGGGATTATCCTGTTCAACACTGACTGGTCTCAACCCATTGAGGCAAAATaGCCTGTGCCTGGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SRVAELSGIILFNTDWSQPIEAK*PVPGTT Trigger: TGTGGTCCCAGGCACAGGTCATTTTGCCTCAATGGG...TTGAGACCAGTCAGTGTTGAACAGGATAATCCCACTTAACTCAGCCACACGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| CDS-3UTR TCA 90 bp | CAGGTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGTTGTCTCTACCAGGCTaGTCTCACACTGGACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QVSLLNSGPALSILLTSRLSLPG*SHTGLN Trigger: GTTCAGTCCAGTGTGAGATCAGCCTGGTAGAGACAA...CCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR GCA 90 bp | TATGTCTTCAGTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTGTTTGTCTCTAAGGCAAAATGACCTGTaGCTGGGACCACAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YVFSVLCGCDGFWYCLSLRQNDL*LGPQGC Trigger: GCAGCCCTGTGGTCCCAGGCACAGGTCATTTTGCCT...TAGAGACAAACAATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135531.2 ENSMUST00000137675.8 ENSMUST00000145784.8 |
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| CDS-3UTR CCA 90 bp | GTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCATGGGATGCTGGAGCTTaGGAGAAAAACCTCTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: VSLLNSGPALSILLTSRPWDAGA*EKNLFA Trigger: TGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCA...TGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | TTATCTATACTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTGCAAGGTCTGGGATGCTGGAGCTTaGGAGAAAAACCTCTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: LSILLTSRPVMTVAGCKVWDAGA*EKNLFA Trigger: TGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCA...GACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAGTATAGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | ATCTATACTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTGCAAGGTCAACAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: IYTADFQASDDSSRVQGQQITFA*DAGAWE Trigger: CTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTG...TTGACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAGTATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | CTTATCTATACTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTGCAAGGTCAGATTACTTTCGCTTaGGATGCTGGAGCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LIYTADFQASDDSSRVQGQITFA*DAGAWE Trigger: CTCCCAAGCTCCAGCATCCCAAGCGAAAGTAATCTG...ACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAGTATAGATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR TCA 90 bp | CAAAAACAGGTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTCCCATTGAGGCAAAATaGCCTGTGCCTGGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: QKQVSLLNSGPALSILLTPIEAK*PVPGTT Trigger: TGTGGTCCCAGGCACAGGTCATTTTGCCTCAATGGG...AGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACCTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
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| CDS-3UTR TCA 90 bp | AGCAGGGTGCAAGGTCAACACAGGAAACCAGCGTCATTTCTGTATGTGAACGATTTGTCTCTACCAGGCTaGTCTCACACTGGACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SRVQGQHRKPASFLYVNDLSLPG*SHTGLN Trigger: GTTCAGTCCAGTGTGAGATCAGCCTGGTAGAGACAA...ATCGTTCACATACAGAAATGACGCTGGTTTCCTGTGTTGACCTTGCACCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR TCA 90 bp | CTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTCCAGGCCAGTGATGTGTTCTCTGTGGCTGTaGCGGGTTCTGGTATTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LLNSGPALSILLTSRPVMCSLWL*RVLVLF Trigger: AAACAATACCAGAACCCGTCACAGCCACAGAGAACA...CATCACTGGCCTGGAAGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGGGTGCAGGGAAAATCTCATGACCCAACTTGGAATAAGACAAAGAGACATTCAGGAACACACTaGATGAGAACTTGGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LPRVQGKSHDPTWNKTKRHSGTH*MRTWGA Trigger: CGCGCCCCAAGTTCTCATGCAGTGTGTTCCTGAATG...TCTCTTTGTCTTATTCCAAGTTGGGTCATGAGATTTTCCCTGCACCCTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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| CDS-3UTR CCA 90 bp | CTTATCTATACTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTGCAAGGTTTTCGCTTGGGATGCTaGAGCTTGGGAGAAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: LIYTADFQASDDSSRVQGFRLGC*SLGEKP Trigger: AGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAA...ACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAGTATAGATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR TCA 90 bp | CAATCAAACAGTAGAGCATCAAGAAGAGTGAGATCCTGGGACTGCCATAGAAATCCCATTGAGGCAAAATaGCCTGTGCCTGGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: QSNSRASRRVRSWDCHRNPIEAK*PVPGTT Trigger: TGTGGTCCCAGGCACAGGTCATTTTGCCTCAATGGG...ATTTCTATGGCAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000130158.8 ENSMUST00000137675.8 ENSMUST00000145784.8 ENSMUST00000164721.8 |
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| CDS-3UTR GCA 90 bp | ATGTCTGTGTATAGCACTCTGCAAAATGCCCTTGCTTATGTGAGGCATATTACAAGGCAAAATGACCTGTaGCTGGGACCACAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MSVYSTLQNALAYVRHITRQNDL*LGPQGC Trigger: GCAGCCCTGTGGTCCCAGGCACAGGTCATTTTGCCT...TGTAATATGCCTCACATAAGCAAGGGCATTTTGCAGAGTGCTATACACAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| CDS-3UTR GCA 90 bp | GATGACAGTAGCAGGGTGCAAGGTCAACACAGGAAACCAGCGTCATTTCTGTATTACTTTCGCTTGGGATaGTGGAGCTTGGGAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: DDSSRVQGQHRKPASFLYYFRLG*WSLGEK Trigger: TTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTA...ATACAGAAATGACGCTGGTTTCCTGTGTTGACCTTGCACCCTGCTACTGTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | AGTGTTGTTATGCCTTTAATTCCAGTAACTCTGAGTAGGCAAAAACAGGTGAGTCACACTGGACTGAACTaGCCCTCTGAAGGTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SVVMPLIPVTLSRQKQVSHTGLN*PSEGGP Trigger: AGGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTGTG...ACTCACCTGTTTTTGCCTACTCAGAGTTACTGGAATTAAAGGCATAACAACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR CAA 72 bp | AGACAAGGGTTGCCTCAAGAATGCATTTTCACTCCCTaGATCCAAGGAAAGTGGAAGTGGAACCTTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RQGLPQECIFTP*IQGKWKWNLEA Trigger: GGCTTCAAGGTTCCACTTCCACTTTCCTTGGATCAAGGGAGTGAAAATGCATTCTTGAGGCAACCCTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CAA 72 bp | CGGGTAGTCAGCACTTTCAGCGATATGAATATCATCTaGGCTGGAGGCCAGGTGGACAATTTGTCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: RVVSTFSDMNII*AGGQVDNLSSL Trigger: AAGTGAAGACAAATTGTCCACCTGGCCTCCAGCCAAGATGATATTCATATCGCTGAAAGTGCTGACTACCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| 3UTR CAA 72 bp | TTCTGGACAACCCTGAACTTCGTGTGGTCCTTGTCTTaGGCTATAACTGCTGTAAGGTGGGAGCCAGTAATT | + |
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Preference number: 4 (lower is better) Translates to: FWTTLNFVWSLS*AITAVRWEPVI Trigger: AATTACTGGCTCCCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGGGTTGTCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164721.8 |
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| CDS-3UTR GCA 90 bp | ATAGAAATGATGGGACACATCCATGATGATGGGCTTCTCTCGTCGTATGGTCCATACTTTCGCTTGGGATaGTGGAGCTTGGGAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: IEMMGHIHDDGLLSSYGPYFRLG*WSLGEK Trigger: TTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAAGTA...TGGACCATACGACGAGAGAAGCCCATCATCATGGATGTGTCCCATCATTTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | AACGATGAACAATCAAACAGTAGAGCATCAAGAAGAGTGAGATCCTGGGACTGCTTTCGCTTGGGATGCTaGAGCTTGGGAGAAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: NDEQSNSRASRRVRSWDCFRLGC*SLGEKP Trigger: AGGTTTTTCTCCCAAGCTCCAGCATCCCAAGCGAAA...GCAGTCCCAGGATCTCACTCTTCTTGATGCTCTACTGTTTGATTGTTCATCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CCA 90 bp | GGATGTATGTCTTCAGTGTTCTCTGTGGCTGTGACGGGTTCTGGTATTGTTTGTCTTGGGGCGCGTCAATaGAATAAACTCCTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GCMSSVFSVAVTGSGIVCLGARQ*NKLLQK Trigger: TTTCTGAAGGAGTTTATTCCATTGACGCGCCCCAAG...ACAAACAATACCAGAACCCGTCACAGCCACAGAGAACACTGAAGACATACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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| 3UTR CAA 72 bp | TTAACAGCCCATTACCAGCTTTCTATGTGTGAATGCTaGTCCTTCCTCACCTGCCCAAAAGAGTCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LTAHYQLSMCEC*SFLTCPKESLR Trigger: TCTCAGAGACTCTTTTGGGCAGGTGAGGAAGGACAAGCATTCACACATAGAAAGCTGGTAATGGGCTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CAA 72 bp | GAGATTATCATGTTAAAAACCTCCTTAAAGGAGATTTaGTGGCCCTCTTCTGAGCCAAAGGGGTGGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: EIIMLKTSLKEI*WPSSEPKGWIR Trigger: CCTGATCCACCCCTTTGGCTCAGAAGAGGGCCACAAAATCTCCTTTAAGGAGGTTTTTAACATGATAATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CAA 72 bp | TATACGAACAATGAAAAGTGCTTCTGGGACTCTGGTTaGTTAGACAAGGGTTGCCTCAAGAATGCATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YTNNEKCFWDSG*LDKGCLKNAFS Trigger: TGAAAATGCATTCTTGAGGCAACCCTTGTCTAACAAACCAGAGTCCCAGAAGCACTTTTCATTGTTCGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| 3UTR CAA 72 bp | CAAGCAAGGCTTAGATCTACCAACAAGGCTTATCAATaGCTGCTTTCTCTGTATACGAACAATGAAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QARLRSTNKAYQ*LLSLYTNNEKC Trigger: GCACTTTTCATTGTTCGTATACAGAGAAAGCAGCAATTGATAAGCCTTGTTGGTAGATCTAAGCCTTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135531.2 |
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| CDS-3UTR CAA 90 bp | TTATCTATACTGCTGACTTCCAGGCCAGTGATGACAGTAGCAGGGTGCAAGGTCTTGGGATGCTGGAGCTaGGGAGAAAAACCTCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: LSILLTSRPVMTVAGCKVLGCWS*GEKPLR Trigger: GCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAA...GACCTTGCACCCTGCTACTGTCATCACTGGCCTGGAAGTCAGCAGTATAGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS-3UTR CAA 90 bp | CAAAAACAGGTGAGTCTCTTGAATTCAGGGCCAGCCTTATCTATACTGCTGACTTTGGGATGCTGGAGCTaGGGAGAAAAACCTCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: QKQVSLLNSGPALSILLTLGCWS*GEKPLR Trigger: GCGAAGAGGTTTTTCTCCCAAGCTCCAGCATCCCAA...AGTCAGCAGTATAGATAAGGCTGGCCCTGAATTCAAGAGACTCACCTGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS GCA 72 bp | GATGCTGGAGCTTGGGAGAAAAACCTCTTCGCAGCGTaGTCCGGTGTAATTTTCAATGCACCTACAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: DAGAWEKNLFAA*SGVIFNAPTEW Trigger: CCATTCTGTAGGTGCATTGAAAATTACACCGGAGCACGCTGCGAAGAGGTTTTTCTCCCAAGCTCCAGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000130158.8 ENSMUST00000164721.8 |
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| CDS GCA 72 bp | TCCTTCAGAAACACTGGGTACACCAAGGTGCCCAATTaGACGAATGGTTTAAGTAGGCAATGTCTTAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SFRNTGYTKVPN*TNGLSRQCLRN Trigger: GTTTCTAAGACATTGCCTACTTAAACCATTCGTGCAATTGGGCACCTTGGTGTACCCAGTGTTTCTGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145784.8 |
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