RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062991, ENSMUSG00000118541

Ensembl transcript IDs: ENSMUST00000073884.7, ENSMUST00000207417.3, ENSMUST00000207470.3, ENSMUST00000207584.3, ENSMUST00000207678.3, ENSMUST00000208205.3, ENSMUST00000208335.2, ENSMUST00000208488.2, ENSMUST00000208497.3, ENSMUST00000208598.2, ENSMUST00000208617.3, ENSMUST00000208819.3, ENSMUST00000208931.2, ENSMUST00000209022.3, ENSMUST00000209107.4, ENSMUST00000238791.2, ENSMUST00000238812.2, ENSMUST00000238816.2, ENSMUST00000238826.2, ENSMUST00000238842.2, ENSMUST00000238879.2, ENSMUST00000239000.2, ENSMUST00000239032.2, ENSMUST00000239051.2, ENSMUST00000239067.2, ENSMUST00000239080.2, ENSMUST00000239151.2

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGCTCTCAGCCAGACGGAAGGCAGGGGCCACCTCAAGGCTGGCTaGCAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTAC +
Preference number: 1 (lower is better)
Translates to: PALSQTEGRGHLKAG*QGVLYAQEWCIFTY
Trigger: GTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTGGCCCCTGCCTTCCGTCTGGCTGAGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 90 bp GCTGACTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTG +
Preference number: 1 (lower is better)
Translates to: ADCHRGHGHRHAGHG*RHFRRGRFRGAWRV
Trigger: CACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 90 bp GTGGCGTCACAAGAAGCAGAGGCCTCTCTTCTTCCACAAAGGGGCTaGCTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTG +
Preference number: 1 (lower is better)
Translates to: VASQEAEASLLPQRG*LPQRAWTPSCWTRV
Trigger: CACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCTCTGCTTCTTGTGACGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR GCA 90 bp CGTCACAAGAAGCAGAGGCCTCTCTTCTTCCACAAAGGGGCTGACTaGCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTGGAGA +
Preference number: 1 (lower is better)
Translates to: RHKKQRPLFFHKGAD*HRGHGHRHAGHGWR
Trigger: TCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCTCTGCTTCTTGTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 90 bp GGGGGAGGCTGGTACTCTGATGTGCAGGGTTGTGATGAAAGGAGTTaGGTTGCTGGGGGTGATGATCATACTTCTTCTCCCGTAGCCTCG +
Preference number: 1 (lower is better)
Translates to: GGGWYSDVQGCDERS*VAGGDDHTSSPVAS
Trigger: CGAGGCTACGGGAGAAGAAGTATGATCATCACCCCCAGCAACTCAACTCCTTTCATCACAACCCTGCACATCAGAGTACCAGCCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 90 bp CGATTGGAATTAGATGAGGGTACACCTGAAGGCTCCTGCTCTTTTTaGGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAG +
Preference number: 1 (lower is better)
Translates to: RLELDEGTPEGSCSF*VGCLSATGTVGEAQ
Trigger: CTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCTTCAGGTGTACCCTCATCTAATTCCAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR CCA 90 bp CTCACAGAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTaGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGGTGACT +
Preference number: 1 (lower is better)
Translates to: LTELGLLSISNLLAM*PLGLVLLARRLLVT
Trigger: AGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 90 bp CACTGCTATGTACCACAGGTACATCATACAAGTGGTTGGGGCAGATaGCTGAGTGTACTCTTGGGTCTGAGGCTTCATGACACTCTGAGC +
Preference number: 1 (lower is better)
Translates to: HCYVPQVHHTSGWGR*LSVLLGLRLHDTLS
Trigger: GCTCAGAGTGTCATGAAGCCTCAGACCCAAGAGTACACTCAGCCATCTGCCCCAACCACTTGTATGATGTACCTGTGGTACATAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 90 bp GTTCTTTTGGCCCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTTaGATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCC +
Preference number: 1 (lower is better)
Translates to: VLLARRLLVTFLIGS*IGSYSWVVSYSSSS
Trigger: GGAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 90 bp AGAAAGGATTGCACCTTTAGCAGCTGTGGTTGGCTGGTCAACAGATaGGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGT +
Preference number: 1 (lower is better)
Translates to: RKDCTFSSCGWLVNR*AAGSFPPREKVKLS
Trigger: ACTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGCTAAAGGTGCAATCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 90 bp CATCTTCTGTCTCACTTTCTGAGTTACTGCTCACAGAACTTGGGTTaGTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGG +
Preference number: 1 (lower is better)
Translates to: HLLSHFLSYCSQNLG*CPFPTYWQCGHWAW
Trigger: CCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTAACTCAGAAAGTGAGACAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 90 bp TTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTaGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACAT +
Preference number: 1 (lower is better)
Translates to: FGWMCHFKTVLVGCY*KQREGQLLALQTIH
Trigger: ATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CCA 90 bp TTTGGCCCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCCACTAT +
Preference number: 1 (lower is better)
Translates to: FGPPAIGDFLNRLLN*LILLGRFVFLILHY
Trigger: ATAGTGGAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 90 bp ATCACTGTACACACAGAGAACTGCCCTGTGACCAGTGGCAAGAAATaGGAGACTGCACATACTACGAGTAACTTGAAGGGTTTCCACTCA +
Preference number: 1 (lower is better)
Translates to: ITVHTENCPVTSGKK*ETAHTTSNLKGFHS
Trigger: TGAGTGGAAACCCTTCAAGTTACTCGTAGTATGTGCAGTCTCTCATTTCTTGCCACTGGTCACAGGGCAGTTCTCTGTGTGTACAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 90 bp GTGCAGCTGCTTTCCCCTTGTAACTTCTACACACTCACTCCTAAATaGTCTAGCATGAAACAATGGCCAAGTCACTGCTATGTACCACAG +
Preference number: 1 (lower is better)
Translates to: VQLLSPCNFYTLTPK*SSMKQWPSHCYVPQ
Trigger: CTGTGGTACATAGCAGTGACTTGGCCATTGTTTCATGCTAGAGCATTTAGGAGTGAGTGTGTAGAAGTTACAAGGGGAAAGCAGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 90 bp TTGCCATTGGCTTTGCCAATCCTCTGTTCAACTCCTTCCCAATTTTaGTATGGAACTCCTAAGAGCCTACTAAGAAACTCAAGAAGCTCC +
Preference number: 1 (lower is better)
Translates to: LPLALPILCSTPSQF*YGTPKSLLRNSRSS
Trigger: GGAGCTTCTTGAGTTTCTTAGTAGGCTCTTAGGAGTTCCATAGCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 90 bp GATTCGGTTCAACTGGGAACAAGAATCTATCATTGCCATTGGCTTTaGCAATCCTCTGTTCAACTCCTTCCCAATTTTGCTATGGAACTC +
Preference number: 1 (lower is better)
Translates to: DSVQLGTRIYHCHWL*QSSVQLLPNFAMEL
Trigger: GAGTTCCATAGCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTGAACCGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 90 bp TATCTTCACCTACTCTTTCATCTTCTGTCTCACTTTCTGAGTTACTaGTCACAGAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAA +
Preference number: 1 (lower is better)
Translates to: YLHLLFHLLSHFLSY*SQNLGCCPFPTYWQ
Trigger: TTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTAACTCAGAAAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 90 bp TTCAACTTCAGGCCAAAAGAGAAATACATACAGAGAAAGTTACCCTaGATAGACGCCACCCATATTGACAGTCACACAGACACAAGAAAG +
Preference number: 1 (lower is better)
Translates to: FNFRPKEKYIQRKLP*IDATHIDSHTDTRK
Trigger: CTTTCTTGTGTCTGTGTGACTGTCAATATGGGTGGCGTCTATCCAGGGTAACTTTCTCTGTATGTATTTCTCTTTTGGCCTGAAGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 90 bp GTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTaGAGCAAACCTTTGGCTGACAGAGTAGAGAGAACTCATTTTATA +
Preference number: 1 (lower is better)
Translates to: VIVACCWVYYYLRVQ*SKPLADRVERTHFI
Trigger: TATAAAATGAGTTCTCTCTACTCTGTCAGCCAAAGGTTTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CCA 90 bp TTGGGAAAGCAAAGAAACTTTATACAAAGTAGAAAGGTATTTGGATaGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAG +
Preference number: 1 (lower is better)
Translates to: LGKQRNFIQSRKVFG*MCHFKTVLVGCYWK
Trigger: CTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTACTTTGTATAAAGTTTCTTTGCTTTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CCA 90 bp GGTGAATCTATGTGTTTATTTAGGTTTTATACAGCAATAGGGTCTTaGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGT +
Preference number: 1 (lower is better)
Translates to: GESMCLFRFYTAIGS*LAITLDSLACNSSC
Trigger: ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTATAAAACCTAAATAAACACATAGATTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 90 bp TCTGGATTAGCAGTTGTTCATTTGTTAATATCTATAAGTGTCCATTaGCTTTCCAATCACAAGAGAACAATCTTAGTCCTGCTTTTGAGA +
Preference number: 1 (lower is better)
Translates to: SGLAVVHLLISISVH*LSNHKRTILVLLLR
Trigger: TCTCAAAAGCAGGACTAAGATTGTTCTCTTGTGATTGGAAAGCCAATGGACACTTATAGATATTAACAAATGAACAACTGCTAATCCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp GGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGGGGGCGAACATACGAGCCGGGGTaGTCATGGCTGATACATACC +
Preference number: 2 (lower is better)
Translates to: GHGHRHAGHGWRHFRRGRTYEPG*SWLIHT
Trigger: GGTATGTATCAGCCATGACCACCCCGGCTCGTATGT...TCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp AGGCCTCTCTTCTTCCACAAAGGGGCTGACTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: RPLFFHKGADCHRGHGHRHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...ACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR GCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAGGAGAGACCGCAGGTaGTCATGGGATTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPRRDRR*SWDSLT
Trigger: AGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCCT...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR-3UTR GCA 90 bp TTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGGTGACTGCATGGACACCGTCATaGTGGACACGGGTGGAGACA +
Preference number: 2 (lower is better)
Translates to: LAMWPLGLVLLARRLLVTAWTPS*WTRVET
Trigger: TGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGC...AGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp GCTGACTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 2 (lower is better)
Translates to: ADCHRGHGHRHAGHGWRHGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...ATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGCTGGTTGGGTGCTACTaGAAGCAAAGAGAGGGACAG +
Preference number: 2 (lower is better)
Translates to: AAVVGWSTDELLGHFLQELVGCY*KQREGQ
Trigger: CTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAG...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp ATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGGTGACTTTCTTACATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: MWPLGLVLLARRLLVTFLHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...TAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp TTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTGTGGAGAAGCGGTGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 2 (lower is better)
Translates to: LAITLDSLACNSSCVEKRCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...CCGCTTCTCCACACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR TCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACATGGGATTCTCTCACTaGATGAGGATCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VNRRRHSPMTISNVTALDMGFSH*MRISSR
Trigger: CCTGGAGGAGATCCTCATTCAGTGAGAGAATCCCAT...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR-3UTR GCA 90 bp TGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTCACAAAGGGGCTGACTaGCACAGAGGGCATGGACAC +
Preference number: 2 (lower is better)
Translates to: WVAVHFQPIGNVAIGLGSHKGAD*HRGHGH
Trigger: GTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTG...AGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp AGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTGGAAATCTACAGGGAGCCGGGGTGGTCATaGCTGATACATACCTTCCTA +
Preference number: 2 (lower is better)
Translates to: RHFRRGRFRGAWRVEIYREPGWS*LIHTFL
Trigger: TAGGAAGGTATGTATCAGCCATGACCACCCCGGCTC...CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGACATACGAGCCGGGGTaGTCATGGCTGATACATACC +
Preference number: 2 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLTYEPG*SWLIHT
Trigger: GGTATGTATCAGCCATGACCACCCCGGCTCGTATGT...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CAA 90 bp CAGGTACATCATACAAGTGGTTGGGGCAGATGGCTGAGTGTACTCTaGGGTCTGAGGCTTCATGACACTCTGAGCCTCTTCTGGAGCCAA +
Preference number: 2 (lower is better)
Translates to: QVHHTSGWGRWLSVL*GLRLHDTLSLFWSQ
Trigger: TTGGCTCCAGAAGAGGCTCAGAGTGTCATGAAGCCTCAGACCCAAGAGTACACTCAGCCATCTGCCCCAACCACTTGTATGATGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 90 bp GAGTTACTGCTCACAGAACTTGGGTTGCTGTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTA +
Preference number: 2 (lower is better)
Translates to: ELLLTELGLLSISNL*AMWPLGLVLLARRL
Trigger: TAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR TCA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTATGGGATTCTCTCACTaGATGAGGATCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: RRRHSPMTISNVTALDLLMGFSH*MRISSR
Trigger: CCTGGAGGAGATCCTCATTCAGTGAGAGAATCCCAT...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR-3UTR TCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGGGCTCCTGCTCTTTTTaGGTTGGTTGCCTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: NAWEEESRMTIEVANGQLGSCSF*VGCLSA
Trigger: GGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCC...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR-3UTR TCA 90 bp TGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGTGGAAATCTACAGGTaGCATACGAGCCGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: CPFPTYWQCGHWAWFFWPVEIYR*HTSRGG
Trigger: ACCACCCCGGCTCGTATGTCACCTGTAGATTTCCAC...GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR GCA 90 bp GGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATAAGAGGATGACTAGGAGAGACCGCAGGTaGTCATGGGATTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: GTVGEAQDEGVQPNKRMTRRDRR*SWDSLT
Trigger: AGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCCT...AGTCATCCTCTTATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR-3UTR CCA 90 bp TCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCTGGACACCGTCATGCTaGACACGGGTGGAGACATTT +
Preference number: 2 (lower is better)
Translates to: SISNLLAMWPLGLVLLARWTPSC*TRVETF
Trigger: AAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCA...GCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CAA 90 bp GAGAGAACATGCTCAAACCTGTTGACTTTTCCTCCCTGTGGGGAGTaGACCACTCTCTGCAACACTGGGAAGTCAGCATTAGGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: ERTCSNLLTFPPCGE*TTLCNTGKSALGFH
Trigger: GTGGAAGCCTAATGCTGACTTCCCAGTGTTGCAGAGAGTGGTCAACTCCCCACAGGGAGGAAAAGTCAACAGGTTTGAGCATGTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 90 bp GGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGGCTATTGGTGACTTTCTTAATAGGC +
Preference number: 2 (lower is better)
Translates to: GLLSISNLLAMWPLG*VLLARRLLVTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 2 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CAA 90 bp GAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATaGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGGTGACTTTCTTA +
Preference number: 2 (lower is better)
Translates to: ELGLLSISNLLAMWP*GLVLLARRLLVTFL
Trigger: TAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp TGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCCGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 2 (lower is better)
Translates to: CPFPTYWQCGHWAWFFWPRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp GCTCTTGAATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCCACTATGGACACCGTCATGCTaGACACGGGTGGAGACATTT +
Preference number: 2 (lower is better)
Translates to: ALELAHTPGSFRIPHPPLWTPSC*TRVETF
Trigger: AAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCA...TAGTGGAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CAA 90 bp GGTTCTTTTGGCCCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: GSFGPPAIGDFLNRL*NWLILLGRFVFLIL
Trigger: GAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR TCA 90 bp CATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAGAAAGCAGCACCGACTaGGCATGCTCCTATTCAGGC +
Preference number: 2 (lower is better)
Translates to: HSAVPISETIWSLTHLLVESSTD*ACSYSG
Trigger: GCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTTC...TACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
3UTR-3UTR TCA 90 bp CTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACAGAAAGCAGCACCGACTaGGCATGCTCCTATTCAGGC +
Preference number: 2 (lower is better)
Translates to: LTHLLVTQSRLVTNREVTESSTD*ACSYSG
Trigger: GCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTTC...TGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
3UTR-3UTR CCA 90 bp ACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTGAGGCAGCTGTGGTTGGCTaGTCAACAGATGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: TSARKAAIFPMLLTLPSEAAVVG*STDELL
Trigger: CAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC...CTCACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp GTCACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTACTCTGAGCCTCTTCTaGAGCCAACAAGCGGGTACA +
Preference number: 2 (lower is better)
Translates to: VTSARKAAIFPMLLTLPSTLSLF*SQQAGT
Trigger: TGTACCCGCTTGTTGGCTCCAGAAGAGGCTCAGAGT...ACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR GCA 90 bp ATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTATTGTTAATGGTCTCATaGGACAGGCAGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: ISETIWSLTHLLVTQSRLLLMVS*DRQRQS
Trigger: TGACTGCCTCTGCCTGTCGCATGAGACCATTAACAA...TAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR-3UTR CCA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTGAGCCGGGGTGGTCATaGCTGATACATACCTTCCTA +
Preference number: 2 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLEPGWS*LIHTFL
Trigger: TAGGAAGGTATGTATCAGCCATGACCACCCCGGCTC...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 2 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTCGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 2 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp CAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGT +
Preference number: 2 (lower is better)
Translates to: QGVLYAQEWCIFTYSFIFNRLLN*LILLGR
Trigger: ACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT...GAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTTGGCAATGTGGCCATTaGGCTTGGTTCTTTTGGCCC +
Preference number: 2 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLWQCGH*AWFFWP
Trigger: GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCA...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CCA 90 bp CAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCACTGCTCACAGAACTTaGGTTGCTGTCCATTTCCAA +
Preference number: 2 (lower is better)
Translates to: QGVLYAQEWCIFTYSFIFTAHRT*VAVHFQ
Trigger: TTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGT...GAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CAA 90 bp CTCTTTCATCTTCTGTCTCACTTTCTGAGTTACTGCTCACAGAACTaGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGG +
Preference number: 2 (lower is better)
Translates to: LFHLLSHFLSYCSQN*GCCPFPTYWQCGHW
Trigger: CCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTAACTCAGAAAGTGAGACAGAAGATGAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR TCA 90 bp CCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTTGAATTGGCTCATACTCCTGTTCGCTGAAATACTGTaGAAAAGCAACCACCGTAAC +
Preference number: 2 (lower is better)
Translates to: PPAIGDFLNRLLNWLILLFAEIL*KSNHRN
Trigger: GTTACGGTGGTTGCTTTTTCACAGTATTTCAGCGAA...CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
3UTR-3UTR TCA 90 bp ACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTGAGTATCTCAGAGTCCAGTaGAGCAAACCTTTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: TSARKAAIFPMLLTLPSEYLRVQ*SKPLAD
Trigger: GTCAGCCAAAGGTTTGCTTCACTGGACTCTGAGATA...CTCACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTCCATTTCCAACCTATTaGCAATGTGGCCATTGGGCT +
Preference number: 2 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTPFPTY*QCGHWA
Trigger: AGCCCAATGGCCACATTGCCAATAGGTTGGAAATGG...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR TCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATTCGCTGAAATACTGTaGAAAAGCAACCACCGTAAC +
Preference number: 2 (lower is better)
Translates to: LDGCAISRQYWLGATGSKFAEIL*KSNHRN
Trigger: GTTACGGTGGTTGCTTTTTCACAGTATTTCAGCGAA...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR-3UTR CCA 90 bp CAGTCACACAGACACAAGAAAGAGATGGCATATTGCTGCTTGAGATACATTCTCCACTCTCTGCAACACTaGGAAGTCAGCATTAGGCTT +
Preference number: 2 (lower is better)
Translates to: QSHRHKKEMAYCCLRYILHSLQH*EVSIRL
Trigger: AAGCCTAATGCTGACTTCCCAGTGTTGCAGAGAGTG...GAGAATGTATCTCAAGCAGCAATATGCCATCTCTTTCTTGTGTCTGTGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp CGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGAGAGACAGAAAGGGAGTaGACGTACTGTAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: RNELTIISSYSLTAAFSGETERE*TYCRSW
Trigger: CCAGCTTCTACAGTACGTCCACTCCCTTTCTGTCTC...TCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
3UTR-3UTR CCA 90 bp AATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGATGCGAGACAGAAAGGGAGTaGACGTACTGTAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: NELTIISSYSLTAAFSGCETERE*TYCRSW
Trigger: CCAGCTTCTACAGTACGTCCACTCCCTTTCTGTCTC...GCATCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
3UTR CAA 90 bp AGATTCGGTTCAACTGGGAACAAGAATCTATCATTGCCATTGGCTTaGCCAATCCTCTGTTCAACTCCTTCCCAATTTTGCTATGGAACT +
Preference number: 2 (lower is better)
Translates to: RFGSTGNKNLSLPLA*PILCSTPSQFCYGT
Trigger: AGTTCCATAGCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTGAACCGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR GCA 90 bp AGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTGCATCACATTCTaGAGTACCAATTTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: SLFRMLTLDTEDALFGGMICITF*STNFRD
Trigger: GTCTCTGAAATTGGTACTGCAGAATGTGATGCAAAT...CATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR CAA 90 bp GTCCATTGGCTTTCCAATCACAAGAGAACAATCTTAGTCCTGCTTTaGAGACAGTATGGGGAAAATTACTTAGAGAAGAGAGATGGAAGA +
Preference number: 2 (lower is better)
Translates to: VHWLSNHKRTILVLL*RQYGENYLEKRDGR
Trigger: TCTTCCATCTCTCTTCTCTAAGTAATTTTCCCCATACTGTCTCAAAAGCAGGACTAAGATTGTTCTCTTGTGATTGGAAAGCCAATGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 90 bp GAAAATAGATTCGGTTCAACTGGGAACAAGAATCTATCATTGCCATaGGCTTTGCCAATCCTCTGTTCAACTCCTTCCCAATTTTGCTAT +
Preference number: 2 (lower is better)
Translates to: ENRFGSTGNKNLSLP*ALPILCSTPSQFCY
Trigger: ATAGCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTGAACCGAATCTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 90 bp GGTAAAGAAAATAGATTCGGTTCAACTGGGAACAAGAATCTATCATaGCCATTGGCTTTGCCAATCCTCTGTTCAACTCCTTCCCAATTT +
Preference number: 2 (lower is better)
Translates to: GKENRFGSTGNKNLS*PLALPILCSTPSQF
Trigger: AAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTGAACCGAATCTATTTTCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR TCA 90 bp GCTTTCTCAACTAACATGGCAATAGTAGATTACCAGATAAAGCACAGAAGAAAAAGCTCCGGTCTTGATTaGCAGATAACAGGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: AFSTNMAIVDYQIKHRRKSSGLD*QITGRE
Trigger: TTCTCTGCCTGTTATCTGTCAATCAAGACCGGAGCT...TTTTCTTCTGTGCTTTATCTGGTAATCTACTATTGCCATGTTAGTTGAGAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp GCTTTCTCAACTAACATGGCAATAGTAGATTACCAGATAAAGCACAGAAGAAAACATCATACAAGTGGTTaGGGCAGATGGCTGAGTGTA +
Preference number: 2 (lower is better)
Translates to: AFSTNMAIVDYQIKHRRKHHTSG*GRWLSV
Trigger: TACACTCAGCCATCTGCCCCAACCACTTGTATGATG...TTTTCTTCTGTGCTTTATCTGGTAATCTACTATTGCCATGTTAGTTGAGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR GCA 90 bp CGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGAATTTGCATCACATTCTaGAGTACCAATTTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: RNELTIISSYSLTAAFSGICITF*STNFRD
Trigger: GTCTCTGAAATTGGTACTGCAGAATGTGATGCAAAT...TCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR-3UTR CCA 90 bp AATAACACACTGAGCCGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAATTTCAGAGACAATCTaGAGCCTCACACACCTCTTA +
Preference number: 2 (lower is better)
Translates to: NNTLSRNELTIISSYSLTISETI*SLTHLL
Trigger: TAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAAT...TGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCGGCTCAGTGTGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR-3UTR CCA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGATAGTAGCATGCTGTTaGGTCTACTATTATCTCAGA +
Preference number: 2 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKIVACC*VYYYLR
Trigger: TCTGAGATAATAGTAGACCCAACAGCATGCTACTAT...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
3UTR CAA 90 bp CTCTGGATTAGCAGTTGTTCATTTGTTAATATCTATAAGTGTCCATaGGCTTTCCAATCACAAGAGAACAATCTTAGTCCTGCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: LWISSCSFVNIYKCP*AFQSQENNLSPAFE
Trigger: CTCAAAAGCAGGACTAAGATTGTTCTCTTGTGATTGGAAAGCCAATGGACACTTATAGATATTAACAAATGAACAACTGCTAATCCAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CCA 90 bp GCTTTCTCAACTAACATGGCAATAGTAGATTACCAGATAAAGCACAGAAGAAAAATAGTAGCATGCTGTTaGGTCTACTATTATCTCAGA +
Preference number: 2 (lower is better)
Translates to: AFSTNMAIVDYQIKHRRKIVACC*VYYYLR
Trigger: TCTGAGATAATAGTAGACCCAACAGCATGCTACTAT...TTTTCTTCTGTGCTTTATCTGGTAATCTACTATTGCCATGTTAGTTGAGAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp CACAGAGGGCATGGACACCGTCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGGCGATTTAGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: HRGHGHRHAGHG*RHFRRGRFRGA
Trigger: AGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp TGTGTGGAGAAGCGGCCTGCTGGGTTAGTCCTGCTCTCAGCCAGACGGAAGGCATTGGCCCGCCGGCTATaGGTGACTTTCTTAATAGGC +
Preference number: 3 (lower is better)
Translates to: CVEKRPAGLVLLSARRKALARRL*VTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAA...TGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 72 bp CAAGAAGCAGAGGCCTCTCTTCTTCCACAAAGGGGCTaGCTGCCACAGAGGGCATGGACACCGTCATGCTGG +
Preference number: 3 (lower is better)
Translates to: QEAEASLLPQRG*LPQRAWTPSCW
Trigger: CCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCTCTGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR GCA 72 bp AAGCAGAGGCCTCTCTTCTTCCACAAAGGGGCTGACTaGCACAGAGGGCATGGACACCGTCATGCTGGACAC +
Preference number: 3 (lower is better)
Translates to: KQRPLFFHKGAD*HRGHGHRHAGH
Trigger: GTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp TGGCTGCCAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGG +
Preference number: 3 (lower is better)
Translates to: WLPGGSVCPGMVYLHLLFMWPLG*VLLARR
Trigger: CCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT...AAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 72 bp CTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTaGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTA +
Preference number: 3 (lower is better)
Translates to: LGLLSISNLLAM*PLGLVLLARRL
Trigger: TAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTAGGCTCCTGCTCTTTTaGAGTTGGTTGCCTGTCAGC +
Preference number: 3 (lower is better)
Translates to: RRRHSPMTISNVTALDLLRLLLF*SWLPVS
Trigger: GCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR GCA 72 bp TTGACTTTTCCTCCCTGTGGGGAGTTGACCACTCTCTaGAACACTGGGAAGTCAGCATTAGGCTTCCACCTG +
Preference number: 3 (lower is better)
Translates to: LTFPPCGELTTL*NTGKSALGFHL
Trigger: CAGGTGGAAGCCTAATGCTGACTTCCCAGTGTTGCAGAGAGTGGTCAACTCCCCACAGGGAGGAAAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp GCGTGTGGAAATCTACAGGTGACATACGAGCCGGGGTaGTCATGGCTGATACATACCTTCCTAAAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: ACGNLQVTYEPG*SWLIHTFLKAK
Trigger: CTTGGCCTTTAGGAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR TCA 72 bp TGCACCTTTAGCAGCTGTGGTTGGCTGGTCAACAGATaGGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: CTFSSCGWLVNR*AAGSFPPREKV
Trigger: CACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGCTAAAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp CTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTaGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATA +
Preference number: 3 (lower is better)
Translates to: LFELVACQPLGR*EKLRMKEFSQI
Trigger: TATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
3UTR-3UTR CAA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGGACAGCTGCTAGCCTaGCAAACCATACATCCAGTC +
Preference number: 3 (lower is better)
Translates to: LAGQQMSCWVISSKRESEGQLLA*QTIHPV
Trigger: GACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp GCCAACCAAACCAAGTTAAAATGTCACTGGGTAGTGCAGCTGCTTTCCCCTTGTGGACAGCTGCTAGCCTaGCAAACCATACATCCAGTC +
Preference number: 3 (lower is better)
Translates to: ANQTKLKCHWVVQLLSPCGQLLA*QTIHPV
Trigger: GACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC...ACAAGGGGAAAGCAGCTGCACTACCCAGTGACATTTTAACTTGGTTTGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 72 bp AAGACTGTCCACCAGGCACTCTTGAGGGTAGAGGGATaGATGGAGGGGAAATCAGGGCAGAAAGCAAATCTT +
Preference number: 3 (lower is better)
Translates to: KTVHQALLRVEG*MEGKSGQKANL
Trigger: AAGATTTGCTTTCTGCCCTGATTTCCCCTCCATTCATCCCTCTACCCTCAAGAGTGCCTGGTGGACAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 72 bp GCCCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTTaGATTGGCTCATACTCCTGGGTCGTTTCGTATTCC +
Preference number: 3 (lower is better)
Translates to: ARRLLVTFLIGS*IGSYSWVVSYS
Trigger: GGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR GCA 72 bp CTTCACCCATGCCAGGACCACAGGTGTGCATTCTTTTaGCCTATTACAGCTCTGCCTGGATTCATAAACAGG +
Preference number: 3 (lower is better)
Translates to: LHPCQDHRCAFF*PITALPGFINR
Trigger: CCTGTTTATGAATCCAGGCAGAGCTGTAATAGGGCAAAAGAATGCACACCTGTGGTCCTGGCATGGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 72 bp TACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTaGATTCTTTTGCCCTATTACAGCTCTGCCTGGATT +
Preference number: 3 (lower is better)
Translates to: YKASSPMPGPQV*ILLPYYSSAWI
Trigger: AATCCAGGCAGAGCTGTAATAGGGCAAAAGAATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp ATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTaGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAA +
Preference number: 3 (lower is better)
Translates to: MCHFKTVLVGCY*KQREGQLLALQ
Trigger: TTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CCA 72 bp TCAGAAAGGATTGCACCTTTAGCAGCTGTGGTTGGCTaGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: SERIAPLAAVVG*STDELLGHFLQ
Trigger: TTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGCTAAAGGTGCAATCCTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp TTGGGTCTGAGGCTTCATGACACTCTGAGCCTCTTCTaGAGCCAACAAGCGGGTACAACCAGTCAGTTAAAA +
Preference number: 3 (lower is better)
Translates to: LGLRLHDTLSLF*SQQAGTTSQLK
Trigger: TTTTAACTGACTGGTTGTACCCGCTTGTTGGCTCCAGAAGAGGCTCAGAGTGTCATGAAGCCTCAGACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 72 bp CACACAGAGAACTGCCCTGTGACCAGTGGCAAGAAATaGGAGACTGCACATACTACGAGTAACTTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: HTENCPVTSGKK*ETAHTTSNLKG
Trigger: ACCCTTCAAGTTACTCGTAGTATGTGCAGTCTCTCATTTCTTGCCACTGGTCACAGGGCAGTTCTCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 72 bp TGGTACTCTGATGTGCAGGGTTGTGATGAAAGGAGTTaGGTTGCTGGGGGTGATGATCATACTTCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: WYSDVQGCDERS*VAGGDDHTSSP
Trigger: GGGAGAAGAAGTATGATCATCACCCCCAGCAACTCAACTCCTTTCATCACAACCCTGCACATCAGAGTACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CCA 72 bp AGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTaGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGC +
Preference number: 3 (lower is better)
Translates to: RYLDGCAISRQY*LGATGSKERDS
Trigger: GCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CCA 72 bp AAGTCACTGCTATGTACCACAGGTACATCATACAAGTaGTTGGGGCAGATGGCTGAGTGTACTCTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: KSLLCTTGTSYK*LGQMAECTLGS
Trigger: AGACCCAAGAGTACACTCAGCCATCTGCCCCAACCACTTGTATGATGTACCTGTGGTACATAGCAGTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp CAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTACTGCTCACAGAACTaGGGTTGCTGTCCATTTCCA +
Preference number: 3 (lower is better)
Translates to: QGVLYAQEWCIFTYSFIFYCSQN*GCCPFP
Trigger: TGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTA...GAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp GTCACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTACATCATACAAGTGGTaGGGGCAGATGGCTGAGTGT +
Preference number: 3 (lower is better)
Translates to: VTSARKAAIFPMLLTLPSTSYKW*GQMAEC
Trigger: ACACTCAGCCATCTGCCCCAACCACTTGTATGATGT...ACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR TCA 72 bp AGGGTGACTCTGACCTTTAAAGGCAACATGGAGAGCTaGGAGAACATGCTCAAACCTGTTGACTTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: RVTLTFKGNMES*ENMLKPVDFSS
Trigger: GGAGGAAAAGTCAACAGGTTTGAGCATGTTCTCTCAGCTCTCCATGTTGCCTTTAAAGGTCAGAGTCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp CACAGAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGTTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 3 (lower is better)
Translates to: HRTWVAVHFQPIGNVAIGFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...CCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGC +
Preference number: 3 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLSISNL*AMWPLG
Trigger: GCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp AGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAAGTAACACAGTGGCTTaGTTAATGGTCTCATGCGAC +
Preference number: 3 (lower is better)
Translates to: SSLFRMLTLDTEDALFGGSNTVA*LMVSCD
Trigger: GTCGCATGAGACCATTAACAAAGCCACTGTGTTACT...TCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR TCA 72 bp GCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTaGAGCAAACCTTTGGCTGACAGAGTAGAGAGAACT +
Preference number: 3 (lower is better)
Translates to: ACCWVYYYLRVQ*SKPLADRVERT
Trigger: AGTTCTCTCTACTCTGTCAGCCAAAGGTTTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CCA 72 bp AAAGGAGTGGCCAACCAAACCAAGTTAAAATGTCACTaGGTAGTGCAGCTGCTTTCCCCTTGTAACTTCTAC +
Preference number: 3 (lower is better)
Translates to: KGVANQTKLKCH*VVQLLSPCNFY
Trigger: GTAGAAGTTACAAGGGGAAAGCAGCTGCACTACCCAGTGACATTTTAACTTGGTTTGGTTGGCCACTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp CCGGCTATTGGTGACTTTCTTAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGTTTCGTATTCCTCATC +
Preference number: 3 (lower is better)
Translates to: PAIGDFLNRLLN*LILLGRFVFLI
Trigger: GATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTAATAGTAGCATGCTGTaGGGTCTACTATTATCTCAG +
Preference number: 3 (lower is better)
Translates to: AGQQMSCWVISSKRESEVNSSML*GLLLSQ
Trigger: CTGAGATAATAGTAGACCCAACAGCATGCTACTATT...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
3UTR GCA 72 bp CCTAAATGCTCTAGCATGAAACAATGGCCAAGTCACTaGTATGTACCACAGGTACATCATACAAGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: PKCSSMKQWPSH*YVPQVHHTSGW
Trigger: CCAACCACTTGTATGATGTACCTGTGGTACATAGCAGTGACTTGGCCATTGTTTCATGCTAGAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 72 bp CAGTCACACAGACACAAGAAAGAGATGGCATATTGCTaGTTGAGATACATTCTCTCTTACACAGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: QSHRHKKEMAYC*LRYILSYTEGH
Trigger: ATGGCCCTCTGTGTAAGAGAGAATGTATCTCAAGCAGCAATATGCCATCTCTTTCTTGTGTCTGTGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp CAGTCACACAGACACAAGAAAGAGATGGCATATTGCTGCTTGAGATACATTCTCCATACTACGAGTAACTaGAAGGGTTTCCACTCAAGC +
Preference number: 3 (lower is better)
Translates to: QSHRHKKEMAYCCLRYILHTTSN*KGFHSS
Trigger: GCTTGAGTGGAAACCCTTCAAGTTACTCGTAGTATG...GAGAATGTATCTCAAGCAGCAATATGCCATCTCTTTCTTGTGTCTGTGTGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp ATAGGGTCTTGGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTTTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 3 (lower is better)
Translates to: IGSWLAITLDSLACNSSCFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR GCA 72 bp CTTTCCCCTTGTAACTTCTACACACTCACTCCTAAATaGTCTAGCATGAAACAATGGCCAAGTCACTGCTAT +
Preference number: 3 (lower is better)
Translates to: LSPCNFYTLTPK*SSMKQWPSHCY
Trigger: ATAGCAGTGACTTGGCCATTGTTTCATGCTAGAGCATTTAGGAGTGAGTGTGTAGAAGTTACAAGGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 72 bp GCTTTGCCAATCCTCTGTTCAACTCCTTCCCAATTTTaGTATGGAACTCCTAAGAGCCTACTAAGAAACTCA +
Preference number: 3 (lower is better)
Translates to: ALPILCSTPSQF*YGTPKSLLRNS
Trigger: TGAGTTTCTTAGTAGGCTCTTAGGAGTTCCATAGCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR GCA 72 bp CAACTGGGAACAAGAATCTATCATTGCCATTGGCTTTaGCAATCCTCTGTTCAACTCCTTCCCAATTTTGCT +
Preference number: 3 (lower is better)
Translates to: QLGTRIYHCHWL*QSSVQLLPNFA
Trigger: AGCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp TACACACTCACTCCTAAATGCTCTAGCATGAAACAATaGCCAAGTCACTGCTATGTACCACAGGTACATCAT +
Preference number: 3 (lower is better)
Translates to: YTLTPKCSSMKQ*PSHCYVPQVHH
Trigger: ATGATGTACCTGTGGTACATAGCAGTGACTTGGCCATTGTTTCATGCTAGAGCATTTAGGAGTGAGTGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp ATCAATTTGCATCACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCAAGTAACACAGTGGCTTaGTTAATGGTCTCATGCGAC +
Preference number: 3 (lower is better)
Translates to: INLHHILQYQFQRQSGASSNTVA*LMVSCD
Trigger: GTCGCATGAGACCATTAACAAAGCCACTGTGTTACT...TGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGTGATGCAAATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR TCA 72 bp ATGAATGGAGGGGAAATCAGGGCAGAAAGCAAATCTTaGGTAAGTACAAAGGAGTTTGCTATCTACTATACC +
Preference number: 3 (lower is better)
Translates to: MNGGEIRAESKS*VSTKEFAIYYT
Trigger: GGTATAGTAGATAGCAAACTCCTTTGTACTTACTCAAGATTTGCTTTCTGCCCTGATTTCCCCTCCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CCA 72 bp ATGTGTTTATTTAGGTTTTATACAGCAATAGGGTCTTaGTTAGCGATTACACTAGACAGCCTGGCCTGTAAT +
Preference number: 3 (lower is better)
Translates to: MCLFRFYTAIGS*LAITLDSLACN
Trigger: ATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTATAAAACCTAAATAAACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR-3UTR CAA 90 bp GGGCCATATACCTTCAACTTCAGGCCAAAAGAGAAATACATACAGAGAAAGTTATTTTCTAAGACCTTCTaGTGGGTTATTACTTCCCTT +
Preference number: 3 (lower is better)
Translates to: GPYTFNFRPKEKYIQRKLFSKTF*WVITSL
Trigger: AAGGGAAGTAATAACCCACAAGAAGGTCTTAGAAAA...TAACTTTCTCTGTATGTATTTCTCTTTTGGCCTGAAGTTGAAGGTATATGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR-3UTR CAA 90 bp AGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTATTTATGTTGACTATCAATTaGCATCACATTCTGCAGTAC +
Preference number: 3 (lower is better)
Translates to: RMLTLDTEDALFGGMILFMLTIN*HHILQY
Trigger: GTACTGCAGAATGTGATGCAAATTGATAGTCAACAT...AAATAAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR-3UTR CAA 90 bp AATAACACACTGAGCCGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAATGTTGACTATCAATTaGCATCACATTCTGCAGTAC +
Preference number: 3 (lower is better)
Translates to: NNTLSRNELTIISSYSLTMLTIN*HHILQY
Trigger: GTACTGCAGAATGTGATGCAAATTGATAGTCAACAT...TGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCGGCTCAGTGTGTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR CCA 72 bp GCAGTTGTTCATTTGTTAATATCTATAAGTGTCCATTaGCTTTCCAATCACAAGAGAACAATCTTAGTCCTG +
Preference number: 3 (lower is better)
Translates to: AVVHLLISISVH*LSNHKRTILVL
Trigger: CAGGACTAAGATTGTTCTCTTGTGATTGGAAAGCCAATGGACACTTATAGATATTAACAAATGAACAACTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GAGAAGCGGCCTGCTGGGTTAGTCCTGCTCTCAGCCAGACGGAAGGCAGGGGCCCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: EKRPAGLVLLSARRKAGALWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...GGCCCCTGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp GAGAAGCGGCCTGCTGGGTTAGTCCTGCTCTCAGCCAGACGGAAGGCAGGGGCCCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: EKRPAGLVLLSARRKAGALGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...GGCCCCTGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGGGGTCTGCACTCAGCTaGGTGGAGGGGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRGSALS*VEGLED
Trigger: GTCCTCCAGCCCCTCCACTCAGCTGAGTGCAGACCC...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR TCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGACCTGCTGTCCTCCTTaGGCCGCCCGCAGGACGGGA +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALTCCPP*AARRTG
Trigger: TCCCGTCCTGCGGGCGGCTCAAGGAGGACAGCAGGT...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp GAGAAGCGGCCTGCTGGGTTAGTCCTGCTCTCAGCCAGACGGAAGGCAGGGGCCGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: EKRPAGLVLLSARRKAGAAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...GGCCCCTGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGTGCCCCTGCCTCGCCTaGTGCCTTCCTGTCGAGTGC +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALCPCLA*CLPVEC
Trigger: GCACTCGACAGGAAGGCAGCAGGCGAGGCAGGGGCA...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp GTGGTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVNRRRHSPMTISNVTALMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...AAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp CCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: PQRAWTPSCWTRVETFPKLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...CTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGCGGGGTCCCTGGGCTaGTCGGTGCTGGGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRAGSLG*SVLGSG
Trigger: CCCCGAACCCAGCACCGATCAGCCCAGGGACCCCGC...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR GCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAATCGAGAGATGGGTCTaGACTCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPIERWV*TQLSGG
Trigger: CCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGAT...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR GCA 90 bp AGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGACCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: RLLLFLSWLPVSHWDGGRPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...TCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGCCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTCCTGCACTCAGCTGAGTaGAGGGGCTGGAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: VTLRGDVATRKQHRLSMLLHSAE*RGWRTS
Trigger: GGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAG...GAGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp GGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGGGGGCGATCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GHGHRHAGHGWRHFRRGRSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...TCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp AGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGACTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: RLLLFLSWLPVSHWDGGRLWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...TCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCACACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGACGGGAAGGCTGAGTaGCCCCAGGTGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLDGKAE*PQVSRR
Trigger: GCGCCTGGACACCTGGGGCCACTCAGCCTTCCCGTC...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR TCA 90 bp AGGCCTCTCTTCTTCCACAAAGGGGCTGACTGCCACAGAGGGCATGGACACCGTCCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RPLFFHKGADCHRGHGHRPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...ACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GGGTGGAGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTGGAAATCCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GWRHFRRGRFRGAWRVEILGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...GATTTCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp CTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGGCGGGGTCCCTGGGCTaGTCGGTGCTGGGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: LSNSEPTSHKQRSNTVALAGSLG*SVLGSG
Trigger: CCCCGAACCCAGCACCGATCAGCCCAGGGACCCCGC...CAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp ATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAACCTGCTGTCCTCCTTaGGCCGCCCGCAGGACGGGA +
Preference number: 4 (lower is better)
Translates to: IWSLTHLLVTQSRLVTNRTCCPP*AARRTG
Trigger: TCCCGTCCTGCGGGCGGCTCAAGGAGGACAGCAGGT...TCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGTGGCATATGTTCCGCTaGCGGAAGCCCATCGAGAGA +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRWHMFR*RKPIER
Trigger: TCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCA...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR GCA 90 bp GCTCTAGCTCTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGCTTCCGGGTGGGTACTaGGGAAGGTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ALALGDSEGRCSNKKAAPLPGGY*GRFRGH
Trigger: GTGGCCTCTGAACCTTCCGCAGTACCCACCCGGAAG...CGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAGAGCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp GGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGGGGGCGAGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: GHGHRHAGHGWRHFRRGRAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...TCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp AGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGATCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: RLLLFLSWLPVSHWDGGRSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...TCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATGCCTTCCTGTCGAGTaGCCCCTGCTGCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRCLPVE*PLLPPR
Trigger: CCGCGGCGGCAGCAGGGGGCACTCGACAGGAAGGCA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACCCCCCAGGGTCAAGGTaGGTAGGAGAGTCGTATTCG +
Preference number: 4 (lower is better)
Translates to: VNRRRHSPMTISNVTALDPPGSR*VGESYS
Trigger: CGAATACGACTCTCCTACCCACCTTGACCCTGGGGG...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: AAVVGWSTDELLGHFLQELWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQLWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGCTGCCACAGAGGGCATaGACACCGTCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: AAVVGWSTDELLGHFLQELPQRA*TPSCWT
Trigger: TGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAG...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGGGGGCGACCGCTTTGTAGAAGCTaGCCATTACGTAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GHGHRHAGHGWRHFRRGRPLCRS*PLRSFG
Trigger: GCCAAAACTACGTAATGGCCAGCTTCTACAAAGCGG...TCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp TTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: FELVACQPLGRWEKLRMKGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...CTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGGTGGAAATCTACAGGTaGCATACGAGCCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AAVVGWSTDELLGHFLQEVEIYR*HTSRGG
Trigger: ACCACCCCGGCTCGTATGTCACCTGTAGATTTCCAC...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp ACTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TATEGMDTVMLDTGGDISVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...GGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp GGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATAAGAGGATGACTCTTCCGGGTGGGTACTaGGGAAGGTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GTVGEAQDEGVQPNKRMTLPGGY*GRFRGH
Trigger: GTGGCCTCTGAACCTTCCGCAGTACCCACCCGGAAG...AGTCATCCTCTTATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR GCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: VNRRRHSPMTISNVTALDLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCACAAAGGGGCTGACTaGCACAGAGGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALHKGAD*HRGHGH
Trigger: GTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTG...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGTGTGGAGAAGCGGCCTaGTGGGTTAGTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALCGEAA*WVSPAL
Trigger: GAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACA...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCATGCCGCCGCGGCGGGTaGACCTTTCCCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEACRRGG*TFPSIT
Trigger: GGTGATCGAGGGAAAGGTGCACCCGCCGCGGCGGCA...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATCTGCACTCAGCTGAGTaGAGGGGCTGGAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDLHSAE*RGWRTS
Trigger: GGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAG...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp AGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAAGCCCATCGAGAGATaGGTCTGCACTCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RLLLFLSWLPVSHWDGGRKPIER*VCTQLS
Trigger: ACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTT...TCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCTCCCATCTTCTGTGTaGGTGTCTGGCATATGTTCC +
Preference number: 4 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSLPSSV*VSGICS
Trigger: GGAACATATGCCAGACACCCACACAGAAGATGGGAG...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp CACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGACGTACTCCCCCAGGGTCAAGGTaGGTAGGAGAGTCGTATTCG +
Preference number: 4 (lower is better)
Translates to: HRLSMLLFRQRQKGSGRTPPGSR*VGESYS
Trigger: CGAATACGACTCTCCTACCCACCTTGACCCTGGGGG...AGTACGTCCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207584.3
CDS-3UTR CCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACGCTGAGTTCCTGACTTaGGTGTTCTCACCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VNRRRHSPMTISNVTALDAEFLT*VFSPQG
Trigger: CCCCTGAGGTGAGAACACCCAAGTCAGGAACTCAGC...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCATCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp CACAGAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HRTWVAVHFQPIGNVAIGMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...CCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp GCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGGCACCGAGCCCACGCTaGGCGGGGACGAGTAGCACA +
Preference number: 4 (lower is better)
Translates to: AVPISETIWSLTHLLVTQAPSPR*AGTSST
Trigger: TGTGCTACTCGTCCCCGCCCAGCGTGGGCTCGGTGC...CTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGGGGTCTGCACTCAGCTaGGTGGAGGGGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALGSALS*VEGLED
Trigger: GTCCTCCAGCCCCTCCACTCAGCTGAGTGCAGACCC...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR TCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGTTGTGGCTGAGTTCCTaGCTTGGGTGTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQLWLSS*LGCSHL
Trigger: GAGGTGAGAACACCCAAGTCAGGAACTCAGCCACAA...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR TCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCTTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: PALFELVACQPLGRWEKLFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGGTGGAAATCTACAGGTaGCATACGAGCCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALVEIYR*HTSRGG
Trigger: ACCACCCCGGCTCGTATGTCACCTGTAGATTTCCAC...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: RRRHSPMTISNVTALDLLLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GCTCTAGCTCTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: ALALGDSEGRCSNKKAAPLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...CGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAGAGCTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp CTGACTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LTATEGMDTVMLDTGGDIPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...AATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp ACTGCCACAGAGGGCATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TATEGMDTVMLDTGGDISPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...GGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GGGTGGAGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTGGAAATCTACATCTTGCTCCAGTaGATCCAGGTTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GWRHFRRGRFRGAWRVEIYILLQ*IQVGTC
Trigger: GCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTA...GATTTCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR TCA 90 bp AGGCCTCTCTTCTTCCACAAAGGGGCTGACTGCCACAGAGGGCATGGACACCGTTCTAAGATGAGTTGCTaGCAGCTCGATCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: RPLFFHKGADCHRGHGHRSKMSC*QLDLHA
Trigger: TGCATGCAGATCGAGCTGTCAGCAACTCATCTTAGA...ACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp CCCGTAGCCTCGGTGGCGTCACAAGAAGCAGAGGCCTCTCTTCTTCCACAAAGGTCTAAGATGAGTTGCTaGCAGCTCGATCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: PVASVASQEAEASLLPQRSKMSC*QLDLHA
Trigger: TGCATGCAGATCGAGCTGTCAGCAACTCATCTTAGA...CCTTTGTGGAAGAAGAGAGGCCTCTGCTTCTTGTGACGCCACCGAGGCTACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp GGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTATCGAGAGATGGGTCTaGACTCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GDSEGRCSNKKAAPTEHAIERWV*TQLSGG
Trigger: CCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGAT...AGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp TGTGGAAATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACCCCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: CGNLQVTYEPGWSWLIHTPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...GGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTACACCTCAAGGCTGGCTaGCAGGGGGTTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLHLKAG*QGVLYA
Trigger: GGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTG...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCTGCACTCAGCTGAGTaGAGGGGCTGGAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: FRDNLEPHTPLSNSEPTSLHSAE*RGWRTS
Trigger: GGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAG...ACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp TTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGAGCGGAGGCAGCCGTTaGATCCAGAGAAATAACAGG +
Preference number: 4 (lower is better)
Translates to: FELVACQPLGRWEKLRMKSGGSR*IQRNNR
Trigger: CCTGTTATTTCTCTGGATCCAACGGCTGCCTCCGCT...CTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCTCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PALFELVACQPLGRWEKLSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGTTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAGQQMSCWVISSKRESEMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGTGGCAATGTGGCCATTaGGCTTGGTTCTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAVVGWSTDELLGHFLQEWQCGH*AWFFWP
Trigger: GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCA...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CCTCCCTTAAAATACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTGCATTGGAGAAGCGGCCTGCTaGGTTAGTCCTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PPLKYKASSPMPGPQVCIGEAAC*VSPALS
Trigger: GCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCC...AATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTATTTTAAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GGGTGGAGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTGGAAATCAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: GWRHFRRGRFRGAWRVEIRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...GATTTCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCACCGAGCCCACGCTaGGCGGGGACGAGTAGCACA +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNAPSPR*AGTSST
Trigger: TGTGCTACTCGTCCCCGCCCAGCGTGGGCTCGGTGC...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp CTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGGACGGGAAGGCTGAGTaGCCCCAGGTGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LSNSEPTSHKQRSNTVALDGKAE*PQVSRR
Trigger: GCGCCTGGACACCTGGGGCCACTCAGCCTTCCCGTC...CAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGCGGGGTGGTCATGGCTaGTACATACCTTTCACTATG +
Preference number: 4 (lower is better)
Translates to: AAVVGWSTDELLGHFLQERGGHG*YIPFTM
Trigger: CATAGTGAAAGGTATGTATCAGCCATGACCACCCCG...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGTACATCTTGCTCCAGTaGATCCAGGTTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQYILLQ*IQVGTC
Trigger: GCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTA...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCACCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTCACCTCAAGGCTGGCTaGCAGGGGGTTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: AGQQMSCWVISSKRESEVHLKAG*QGVLYA
Trigger: GGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTG...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGACACCTCAAGGCTGGCTaGCAGGGGGTTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRHLKAG*QGVLYA
Trigger: GGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTG...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp TGTGTGGAGAAGCGGCCTGCTGGGTTAGTCCTGCTCTCAGCCAGACGGAAGGCAATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: CVEKRPAGLVLLSARRKAILSTS*SSESRL
Trigger: CAACCTGGATTCACTGGAGCAAGATGTACTGAGAAT...TGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR GCA 90 bp AGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGTGCCCCTGCCTCGCCTaGTGCCTTCCTGTCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLFRMLTLDTEDALFGGMCPCLA*CLPVEC
Trigger: GCACTCGACAGGAAGGCAGCAGGCGAGGCAGGGGCA...CATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR CCA 90 bp CACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGACGTACTAGCGGAGGCAGCCGTTaGATCCAGAGAAATAACAGG +
Preference number: 4 (lower is better)
Translates to: HRLSMLLFRQRQKGSGRTSGGSR*IQRNNR
Trigger: CCTGTTATTTCTCTGGATCCAACGGCTGCCTCCGCT...AGTACGTCCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207584.3
CDS-3UTR CCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: VNRRRHSPMTISNVTALDAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGTCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDLWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp TGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: CPFPTYWQCGHWAWFFWPLWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATAGGGTCTTGGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGSWLAITLDSLACNSSCMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGGAGCCGGGGTGGTCATaGCTGATACATACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALEPGWS*LIHTFH
Trigger: GTGAAAGGTATGTATCAGCCATGACCACCCCGGCTC...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATTGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATGGAGAAGCGGCCTGCTaGGTTAGTCCTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHGEAAC*VSPALS
Trigger: GCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCC...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGGTAATTCTTCCTGTGTaGAGAAGCGGCCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALVILPV*RSGLLG
Trigger: ACCCAGCAGGCCGCTTCTCCACACAGGAAGAATTAC...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCGGGTTTGGACTTTCATaGGCACATTCTCAGTACATC +
Preference number: 4 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSGFGLS*AHSQYI
Trigger: GATGTACTGAGAATGTGCCCATGAAAGTCCAAACCC...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AGGCCTCTCTTCTTCCACAAAGGGGCTGACTGCCACAGAGGGCATGGACACCGTGGGTTTGGACTTTCATaGGCACATTCTCAGTACATC +
Preference number: 4 (lower is better)
Translates to: RPLFFHKGADCHRGHGHRGFGLS*AHSQYI
Trigger: GATGTACTGAGAATGTGCCCATGAAAGTCCAAACCC...ACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
3UTR CAA 72 bp CATACAAGTGGTTGGGGCAGATGGCTGAGTGTACTCTaGGGTCTGAGGCTTCATGACACTCTGAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HTSGWGRWLSVL*GLRLHDTLSLF
Trigger: GAAGAGGCTCAGAGTGTCATGAAGCCTCAGACCCAAGAGTACACTCAGCCATCTGCCCCAACCACTTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp TGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: WVAVHFQPIGNVAIGLGSHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...AGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTACATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CCTCCCTTAAAATACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTGCATTGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: PPLKYKASSPMPGPQVCIGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...AATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTATTTTAAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PALFELVACQPLGRWEKLLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGTTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCGGGGTGGTCATGGCTaGTACATACCTTTCACTATG +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALRGGHG*YIPFTM
Trigger: CATAGTGAAAGGTATGTATCAGCCATGACCACCCCG...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTACTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
CDS-3UTR TCA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: RRRHSPMTISNVTALDLLLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGATACATCTTGCTCCAGTaGATCCAGGTTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: KQHRLSMLLFRQRQKGSGYILLQ*IQVGTC
Trigger: GCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTA...TCCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp AATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGTGTCCAGGCGCACGGTaGGTAGCGAGTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NLEPHTPLSNSEPTSHKQCPGAR*VASPSS
Trigger: TGAAGAAGGACTCGCTACTCACCGTGCGCCTGGACA...CTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp GCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGCTTCCGGGTGGGTACTaGGGAAGGTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AVPISETIWSLTHLLVTQLPGGY*GRFRGH
Trigger: GTGGCCTCTGAACCTTCCGCAGTACCCACCCGGAAG...CTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp GTGGTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: VVNRRRHSPMTISNVTALAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...AAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCACTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTACTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTTGAATTGGCTCATACTCCTGCCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: PPAIGDFLNRLLNWLILLPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAACACAAAGGGGCTGACTaGCACAGAGGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: LAGQQMSCWVISSKRESEHKGAD*HRGHGH
Trigger: GTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTG...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGACACAAAGGGGCTGACTaGCACAGAGGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRHKGAD*HRGHGH
Trigger: GTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTG...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATACACCTCAAGGCTGGCTaGCAGGGGGTTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIHLKAG*QGVLYA
Trigger: GGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTG...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGATGTGGAGAAGCGGCCTaGTGGGTTAGTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRCGEAA*WVSPAL
Trigger: GAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACA...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp ATCAATTTGCATCACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCATGCCGCCGCGGCGGGTaGACCTTTCCCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: INLHHILQYQFQRQSGASCRRGG*TFPSIT
Trigger: GGTGATCGAGGGAAAGGTGCACCCGCCGCGGCGGCA...TGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGTGATGCAAATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp CAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTATTTGCCTTCCTGTCGAGTaGCCCCTGCTGCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QDADIRYRRCTVRWNDFICLPVE*PLLPPR
Trigger: CCGCGGCGGCAGCAGGGGGCACTCGACAGGAAGGCA...AATAAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR CCA 90 bp AAAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: KAAPTEHAPIQAETEREWAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...CCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLGCCPFPTYWQCGHWAWHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...CCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTTTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RRRHSPMTISNVTALDLLLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGTTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAACATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LAGQQMSCWVISSKRESEHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCTGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAGGAGAAGCGGCCTGCTaGGTTAGTCCTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAGEAAC*VSPALS
Trigger: GCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCC...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QPIGNVAIGLGSFGPPAISSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...AATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp AGGGTACACCTGAAGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGTCTGTTGTTTGTGGCTaGGTTCCTGACTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RVHLKAPALFELVACQPLSVVCG*VPDLGV
Trigger: AACACCCAAGTCAGGAACTCAGCCACAAACAACAGA...CAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCTTCAGGTGTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR TCA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GQQMSCWVISSKRESEVEHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTACCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGCCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCACCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp TTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: FELVACQPLGRWEKLRMKSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...CTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: VNRRRHSPMTISNVTALDSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PALFELVACQPLGRWEKLYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RRRHSPMTISNVTALDLLPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AAAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KAAPTEHAPIQAETEREWPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...CCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGTTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTTTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GDSEGRCSNKKAAPTEHALTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...AGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp CTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: LGDSEGRCSNKKAAPTEHLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...ATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp GGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATAAGAGGATGACTTACATCTTGCTCCAGTaGATCCAGGTTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GTVGEAQDEGVQPNKRMTYILLQ*IQVGTC
Trigger: GCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTA...AGTCATCCTCTTATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCATGTCCAGGCGCACGGTaGGTAGCGAGTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEACPGAR*VASPSS
Trigger: TGAAGAAGGACTCGCTACTCACCGTGCGCCTGGACA...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR GCA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: GQQMSCWVISSKRESEVELGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGACTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCCCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAGCATGGACACCGTCATaGTGGACACGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAAWTPS*WTRVET
Trigger: TGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGC...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGCATGGACACCGTCATaGTGGACACGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRAWTPS*WTRVET
Trigger: TGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGC...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATACACAAAGGGGCTGACTaGCACAGAGGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIHKGAD*HRGHGH
Trigger: GTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTG...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCTGTGGAGAAGCGGCCTaGTGGGTTAGTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCCGEAA*WVSPAL
Trigger: GAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACA...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QGVLYAQEWCIFTYSFIFSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...GAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRILSTS*SSESRL
Trigger: CAACCTGGATTCACTGGAGCAAGATGTACTGAGAAT...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AACAAGAAAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGAAGCCCATCGAGAGATaGGTCTGCACTCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NKKAAPTEHAPIQAETERKPIER*VCTQLS
Trigger: ACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTT...CCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207584.3
CDS-3UTR CCA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGCTCCCATCTTCTGTGTaGGTGTCTGGCATATGTTCC +
Preference number: 4 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRLPSSV*VSGICS
Trigger: GGAACATATGCCAGACACCCACACAGAAGATGGGAG...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGCTAGACAAGCCAGAATaGGAACAATGCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: ALFELVACQPLGRWEKLRLDKPE*EQCRSS
Trigger: AGAAGATCTGCATTGTTCCCATTCTGGCTTGTCTAG...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGCCCCCAGGGTCAAGGTaGGTAGGAGAGTCGTATTCG +
Preference number: 4 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALPPGSR*VGESYS
Trigger: CGAATACGACTCTCCTACCCACCTTGACCCTGGGGG...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp GGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATAAGAGGATGACTGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: GTVGEAQDEGVQPNKRMTAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...AGTCATCCTCTTATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GTGTGGAAATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACTCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: VWKSTGDIRAGVVMADTYSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...GTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATACTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIILWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCLWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACTGCCACAGAGGGCATaGACACCGTCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKLPQRA*TPSCWT
Trigger: TGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAG...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCCATTTCCAACCTATTaGCAATGTGGCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALPFPTY*QCGHWA
Trigger: AGCCCAATGGCCACATTGCCAATAGGTTGGAAATGG...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTGGAGAAGCGGCCTGCTaGGTTAGTCCTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAGEAAC*VSPALS
Trigger: GCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCC...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: LGDSEGRCSNKKAAPTEHRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...ATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp GTGGTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGGGTTTGGACTTTCATaGGCACATTCTCAGTACATC +
Preference number: 4 (lower is better)
Translates to: VVNRRRHSPMTISNVTALGFGLS*AHSQYI
Trigger: GATGTACTGAGAATGTGCCCATGAAAGTCCAAACCC...AAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
3UTR CAA 72 bp GCAACATGGAGAGCTGAGAGAACATGCTCAAACCTGTaGACTTTTCCTCCCTGTGGGGAGTTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: ATWRAERTCSNL*TFPPCGELTTL
Trigger: GAGAGTGGTCAACTCCCCACAGGGAGGAAAAGTCAACAGGTTTGAGCATGTTCTCTCAGCTCTCCATGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 72 bp TCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGGCTATTGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: SISNLLAMWPLG*VLLARRLLVTF
Trigger: GAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: RRRHSPMTISNVTALDLLAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGTTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACCTTCCTATTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: NLQVTYEPGWSWLIHTFLFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...TAGGAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGTGGAAATCTACAGGTaGCATACGAGCCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKVEIYR*HTSRGG
Trigger: ACCACCCCGGCTCGTATGTCACCTGTAGATTTCCAC...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
CDS-3UTR TCA 90 bp CTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGDSEGRCSNKKAAPTEHPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...ATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp GCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AVHFQPIGNVAIGLGSFGVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...GCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp AACAAGAAAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NKKAAPTEHAPIQAETERVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...CCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCACGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp AGGCCTCTCTTCTTCCACAAAGGGGCTGACTGCCACAGAGGGCATGGACACCGTCGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: RPLFFHKGADCHRGHGHRRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...ACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GTGTGGAAATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACTTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VWKSTGDIRAGVVMADTYLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...GTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTGTGGAGAAGCGGCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: LAITLDSLACNSSCVEKRLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...CCGCTTCTCCACACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTTGGCATCGGGCTCCATaGAGAAGATGTACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EPHTPLSNSEPTSHKQRSWHRAP*RRCTCC
Trigger: ACAGCAGGTACATCTTCTTCATGGAGCCCGATGCCA...ACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp CTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATACTTTAGGCCAGCAATaGAGAGGCAGAGGCTTACTA +
Preference number: 4 (lower is better)
Translates to: LGDSEGRCSNKKAAPTEHTLGQQ*RGRGLL
Trigger: TAGTAAGCCTCTGCCTCTGCATTGCTGGCCTAAAGT...ATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp TGGCTGCCAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: WLPGGSVCPGMVYLHLLFAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...AAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: GETAGAHGILSLNEDLLQSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp GTTGCTGGGGGTGATGATCATACTTCTTCTCCCGTAGCCTCGGTGGCGTCACAATCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: VAGGDDHTSSPVASVASQSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...TTGTGACGCCACCGAGGCTACGGGAGAAGAAGTATGATCATCACCCCCAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp ATAGGGTCTTGGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: IGSWLAITLDSLACNSSCLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp ATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAAGCGGAGGCAGCCGTTaGATCCAGAGAAATAACAGG +
Preference number: 4 (lower is better)
Translates to: IWSLTHLLVTQSRLVTNRSGGSR*IQRNNR
Trigger: CCTGTTATTTCTCTGGATCCAACGGCTGCCTCCGCT...TCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp TGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: WVAVHFQPIGNVAIGLGSAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...AGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATACACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGTTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATGAGCCGGGGTGGTCATaGCTGATACATACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHEPGWS*LIHTFH
Trigger: GTGAAAGGTATGTATCAGCCATGACCACCCCGGCTC...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTACATACGAGCCGGGGTaGTCATGGCTGATACATACC +
Preference number: 4 (lower is better)
Translates to: AGQQMSCWVISSKRESEVTYEPG*SWLIHT
Trigger: GGTATGTATCAGCCATGACCACCCCGGCTCGTATGT...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATACATACGAGCCGGGGTaGTCATGGCTGATACATACC +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHTYEPG*SWLIHT
Trigger: GGTATGTATCAGCCATGACCACCCCGGCTCGTATGT...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCTCCCTTAAAATACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTGCATTCGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: PPLKYKASSPMPGPQVCIRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...AATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTATTTTAAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGTGGCAATGTGGCCATTaGGCTTGGTTCTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQQMSCWVISSKRESEVEWQCGH*AWFFWP
Trigger: GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCA...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGACTGCTCACAGAACTTaGGTTGCTGTCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALTAHRT*VAVHFQ
Trigger: TTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGT...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCTGTATGCCCAGGAATaGTGTATCTTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALLYAQE*CIFTYS
Trigger: AGAGTAGGTGAAGATACACCATTCCTGGGCATACAG...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGTAATTCTTCCTGTGTaGAGAAGCGGCCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: AGQQMSCWVISSKRESEVVILPV*RSGLLG
Trigger: ACCCAGCAGGCCGCTTCTCCACACAGGAAGAATTAC...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CCTCCCTTAAAATACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTGCATTTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PPLKYKASSPMPGPQVCISSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...AATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTATTTTAAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDSSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AGGGTACACCTGAAGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: RVHLKAPALFELVACQPLPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...CAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCTTCAGGTGTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GDSEGRCSNKKAAPTEHAPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...AGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: AVHFQPIGNVAIGLGSFGRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...GCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp AAAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGGCACTTTCTTGGGTTTaGACTTTCATGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: KAAPTEHAPIQAETEREWALSWV*TFMGTF
Trigger: GAATGTGCCCATGAAAGTCCAAACCCAAGAAAGTGC...CCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp GTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACGCTTTTTCTTGGGTTTaGACTTTCATGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: VNRRRHSPMTISNVTALDAFSWV*TFMGTF
Trigger: GAATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGC...GTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
3UTR CAA 72 bp TCACTGCTATGTACCACAGGTACATCATACAAGTGGTaGGGGCAGATGGCTGAGTGTACTCTTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLLCTTGTSYKW*GQMAECTLGSE
Trigger: CTCAGACCCAAGAGTACACTCAGCCATCTGCCCCAACCACTTGTATGATGTACCTGTGGTACATAGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 72 bp TGCTCAAACCTGTTGACTTTTCCTCCCTGTGGGGAGTaGACCACTCTCTGCAACACTGGGAAGTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: CSNLLTFPPCGE*TTLCNTGKSAL
Trigger: TAATGCTGACTTCCCAGTGTTGCAGAGAGTGGTCAACTCCCCACAGGGAGGAAAAGTCAACAGGTTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
3UTR CAA 72 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTaGGCCCGCCGGCTATTGGTGACTTTCTTAATAGGC +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVL*ARRLLVTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
3UTR CAA 72 bp CTCACAGAACTTGGGTTGCTGTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTELGLLSISNL*AMWPLGLVLLA
Trigger: GGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGTTGTGGCTGAGTTCCTaGCTTGGGTGTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: AVPISETIWSLTHLLVTQLWLSS*LGCSHL
Trigger: GAGGTGAGAACACCCAAGTCAGGAACTCAGCCACAA...CTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR TCA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GGACTAAAAGGGAAGGCCAGATCTTCCTTATTCACGAATAGGGGCCATATACCTCCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GLKGKARSSLFTNRGHIPPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...AGGTATATGGCCCCTATTCGTGAATAAGGAAGATCTGGCCTTCCCTTTTAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TGGCTGCCAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WLPGGSVCPGMVYLHLLFSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...AAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TGTGGAAATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACCGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: CGNLQVTYEPGWSWLIHTAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...GGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGALGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
CDS-3UTR TCA 90 bp TCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAATGGTCCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SEPTSHKQRSNTVALLMVLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...GACCATTAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp TTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: FRDNLEPHTPLSNSEPTSLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...ACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCTGGCATCGGGCTCCATaGAGAAGATGTACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCWHRAP*RRCTCC
Trigger: ACAGCAGGTACATCTTCTTCATGGAGCCCGATGCCA...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR GCA 90 bp TGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAATCGAGAGATGGGTCTaGACTCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CSTNFRDNLEPHTPLSNSIERWV*TQLSGG
Trigger: CCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGAT...TGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp TGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCATGGCATATGTTCCGCTaGCGGAAGCCCATCGAGAGA +
Preference number: 4 (lower is better)
Translates to: CSTNFRDNLEPHTPLSNSWHMFR*RKPIER
Trigger: TCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCA...TGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCAACTTTAGGCCAGCAATaGAGAGGCAGAGGCTTACTA +
Preference number: 4 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSTLGQQ*RGRGLL
Trigger: TAGTAAGCCTCTGCCTCTGCATTGCTGGCCTAAAGT...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR GCA 90 bp GGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATAAGAGGATGACTACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GTVGEAQDEGVQPNKRMTTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...AGTCATCCTCTTATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR GCA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp TCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SVCPGMVYLHLLFHLLSHSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...GTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp CATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTATCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HSAVPISETIWSLTHLLVSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...TACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR GCA 90 bp CACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGACGTACTATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HRLSMLLFRQRQKGSGRTILSTS*SSESRL
Trigger: CAACCTGGATTCACTGGAGCAAGATGTACTGAGAAT...AGTACGTCCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR GCA 90 bp TGTGGAAATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACCACAGCTCGATCTGCATaGATTTGGATCTGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: CGNLQVTYEPGWSWLIHTTARSA*IWICKP
Trigger: AGGCTTACAGATCCAAATGCATGCAGATCGAGCTGT...GGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp GAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: EPHTPLSNSEPTSHKQRSAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...ACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATTCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAATCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LAGQQMSCWVISSKRESESAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGATCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GCTCTTGAATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCCACTATTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ALELAHTPGSFRIPHPPLLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...TAGTGGAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCGAGCCGGGGTGGTCATaGCTGATACATACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCEPGWS*LIHTFH
Trigger: GTGAAAGGTATGTATCAGCCATGACCACCCCGGCTC...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCATGGACACCGTCATGCTaGACACGGGTGGAGACATTT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAWTPSC*TRVETF
Trigger: AAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCA...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATGGACACCGTCATGCTaGACACGGGTGGAGACATTT +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRWTPSC*TRVETF
Trigger: AAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATGGCAATGTGGCCATTaGGCTTGGTTCTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRWQCGH*AWFFWP
Trigger: GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGTAATTCTTCCTGTGTaGAGAAGCGGCCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKVILPV*RSGLLG
Trigger: ACCCAGCAGGCCGCTTCTCCACACAGGAAGAATTAC...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGACAGCAATAGGGTCTTaGTTAGCGATTACACTAGAC +
Preference number: 4 (lower is better)
Translates to: TVLVGCYWKQREGQLLALTAIGS*LAITLD
Trigger: GTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGT...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: GQQMSCWVISSKRESEVERSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp ACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: TNFRDNLEPHTPLSNSEPRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...CGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp AGGGTACACCTGAAGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGCTTTTTCTTGGGTTTaGACTTTCATGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: RVHLKAPALFELVACQPLAFSWV*TFMGTF
Trigger: GAATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGC...CAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCTTCAGGTGTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp AGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTGGAAATCTACAGGGCTTTTTCTTGGGTTTaGACTTTCATGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: RHFRRGRFRGAWRVEIYRAFSWV*TFMGTF
Trigger: GAATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGC...CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR CCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATTCCTCCGCTTTTTCTTaGGTTTGGACTTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDSSAFS*VWTFMG
Trigger: GCCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGA...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATCCTCCGCTTTTTCTTaGGTTTGGACTTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSSSAFS*VWTFMG
Trigger: GCCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGA...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp TTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTGAGACAGAAAGGGAGTaGACGTACTGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FRDNLEPHTPLSNSEPTSETERE*TYCRSW
Trigger: CCAGCTTCTACAGTACGTCCACTCCCTTTCTGTCTC...ACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
3UTR CAA 72 bp TATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTaGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: YLDGCAISRQYW*GATGSKERDSC
Trigger: GCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CAA 72 bp TCTTCACCCATGCCAGGACCACAGGTGTGCATTCTTTaGCCCTATTACAGCTCTGCCTGGATTCATAAACAG +
Preference number: 4 (lower is better)
Translates to: SSPMPGPQVCIL*PYYSSAWIHKQ
Trigger: CTGTTTATGAATCCAGGCAGAGCTGTAATAGGGCAAAAGAATGCACACCTGTGGTCCTGGCATGGGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp TCACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTATTGTGGCTGAGTTCCTaGCTTGGGTGTTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: SHSAVPISETIWSLTHLLLWLSS*LGCSHL
Trigger: GAGGTGAGAACACCCAAGTCAGGAACTCAGCCACAA...TAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR TCA 90 bp AATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGTCTGTTGTTTGTGGCTaGGTTCCTGACTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NLEPHTPLSNSEPTSHKQSVVCG*VPDLGV
Trigger: AACACCCAAGTCAGGAACTCAGCCACAAACAACAGA...CTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR TCA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACCCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SVCPGMVYLHLLFHLLSHPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...GTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp AATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACCTTCCTAAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: NLQVTYEPGWSWLIHTFLSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...TAGGAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp CCTCCCTTAAAATACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTGCATTCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PPLKYKASSPMPGPQVCILPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...AATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTATTTTAAGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATATTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGACCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AVPISETIWSLTHLLVTQVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...CTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAATTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LAGQQMSCWVISSKRESELTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp AATAGGCTCTTGAATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: NRLLNWLILLGRFVFLILLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...GAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp CACAGAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: HRTWVAVHFQPIGNVAIGGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...CCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp AATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACCTTCCTAACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NLQVTYEPGWSWLIHTFLTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...TAGGAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208819.3
CDS-3UTR GCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCACCTCAAGGCTGGCTaGCAGGGGGTTCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTHLKAG*QGVLYA
Trigger: GGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGCTAGACAAGCCAGAATaGGAACAATGCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRLDKPE*EQCRSS
Trigger: AGAAGATCTGCATTGTTCCCATTCTGGCTTGTCTAG...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp GACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: DSSLFRMLTLDTEDALFGAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...ACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCTTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGATGAAGACGTCCTCGTaGGCCCCCAGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWMKTSS*APSWAA
Trigger: AGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCAT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATACATACGAGCCGGGGTaGTCATGGCTGATACATACC +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNTYEPG*SWLIHT
Trigger: GGTATGTATCAGCCATGACCACCCCGGCTCGTATGT...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GTCACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTTGGACACCGTCATGCTaGACACGGGTGGAGACATTT +
Preference number: 4 (lower is better)
Translates to: VTSARKAAIFPMLLTLPSWTPSC*TRVETF
Trigger: AAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCA...ACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAAACCTATTGGCAATGTaGCCATTGGGCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLNLLAM*PLGLVL
Trigger: AAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCCATTTCCAACCTATTaGCAATGTGGCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHPFPTY*QCGHWA
Trigger: AGCCCAATGGCCACATTGCCAATAGGTTGGAAATGG...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGGAGAAGCGGCCTGCTaGGTTAGTCCTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTGEAAC*VSPALS
Trigger: GCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKSSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALSSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp TTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTGTGGAGAAGCGGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LAITLDSLACNSSCVEKRPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...CCGCTTCTCCACACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp TCATGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTGGGTTTGGACTTTCATaGGCACATTCTCAGTACATC +
Preference number: 4 (lower is better)
Translates to: SCDRQRQSILDLVEGSSSGFGLS*AHSQYI
Trigger: GATGTACTGAGAATGTGCCCATGAAAGTCCAAACCC...AGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGACCAGTAAACTCATTTaGGCACTTTCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRTSKLI*ALSWVW
Trigger: CCAAACCCAAGAAAGTGCCCAAATGAGTTTACTGGT...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTCATCTCTTTCAATCTaGGAGGCAATGCGCACCGCT +
Preference number: 4 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALSSLSI*EAMRTA
Trigger: AGCGGTGCGCATTGCCTCCCAGATTGAAAGAGATGA...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR TCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGACTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTTTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTCGGGGTGGTCATGGCTaGTACATACCTTTCACTATG +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGARGGHG*YIPFTM
Trigger: CATAGTGAAAGGTATGTATCAGCCATGACCACCCCG...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCACCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAATGGTCGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEPTSHKQRSNTVALLMVVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...GACCATTAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp CAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTCGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: QPIGNVAIGLGSFGPPAIRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...AATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTCGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: GDSEGRCSNKKAAPTEHARFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...AGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp AAGCAGCACCGACTGAGCATGCTCCTATTCAGGCAGAGACAGAAAGGGAGTGGACGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: KQHRLSMLLFRQRQKGSGRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...TCCACTCCCTTTCTGTCTCTGCCTGAATAGGAGCATGCTCAGTCGGTGCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp AGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGATTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SSLFRMLTLDTEDALFGGLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...TCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp GTCACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: VTSARKAAIFPMLLTLPSLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...ACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp TTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FRDNLEPHTPLSNSEPTSGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...ACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp TGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCATACATCTTGCTCCAGTaGATCCAGGTTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: CSTNFRDNLEPHTPLSNSYILLQ*IQVGTC
Trigger: GCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTA...TGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR GCA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCTCCCTTAAAATACAAGGCATCTTCACCCATGCCAGGACCACAGGTGTGCATTTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: PPLKYKASSPMPGPQVCISLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...AATGCACACCTGTGGTCCTGGCATGGGTGAAGATGCCTTGTATTTTAAGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCCAGCTGGGCTGCTGTaGCTGCTGTTCTCTACCGAT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTPAGLL*LLFSTD
Trigger: ATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGCATGGACACCGTCATaGTGGACACGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTAWTPS*WTRVET
Trigger: TGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTGTGGAGAAGCGGCCTaGTGGGTTAGTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTCGEAA*WVSPAL
Trigger: GAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLILSTS*SSESRL
Trigger: CAACCTGGATTCACTGGAGCAAGATGTACTGAGAAT...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CCA 90 bp CTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGCTCCCATCTTCTGTGTaGGTGTCTGGCATATGTTCC +
Preference number: 4 (lower is better)
Translates to: LSNSEPTSHKQRSNTVALLPSSV*VSGICS
Trigger: GGAACATATGCCAGACACCCACACAGAAGATGGGAG...CAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp ACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTGAGGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: TSARKAAIFPMLLTLPSEAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...CTCACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACAGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: LTHLLVTQSRLVTNREVTAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...TGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR CCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATTCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLWWWV*MVRAIR
Trigger: GCGAATGGCCCTCACCATCCAAACCCACCACCAGAG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAACACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAGTCACACAGACACAAGAAAGAGATGGCATATTGCTGCTTGAGATACATTCTCGAGCCGGGGTGGTCATaGCTGATACATACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QSHRHKKEMAYCCLRYILEPGWS*LIHTFH
Trigger: GTGAAAGGTATGTATCAGCCATGACCACCCCGGCTC...GAGAATGTATCTCAAGCAGCAATATGCCATCTCTTTCTTGTGTCTGTGTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCATGCTGGACACGGGTaGAGACATTTCCGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTHAGHG*RHFRRG
Trigger: CCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCTGCCACAGAGGGCATaGACACCGTCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLPQRA*TPSCWT
Trigger: TGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTGTGGCCATTGGGCTTaGTTCTTTTGGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWCGHWA*FFWPAG
Trigger: GCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAAACCTATTGGCAATGTaGCCATTGGGCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRNLLAM*PLGLVL
Trigger: AAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACTAAAAGGGAAGGCCAGATCTTCCTTATTCACGAATAGGGGCCATATACCTCCATTTCCAACCTATTaGCAATGTGGCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLKGKARSSLFTNRGHIPPFPTY*QCGHWA
Trigger: AGCCCAATGGCCACATTGCCAATAGGTTGGAAATGG...AGGTATATGGCCCCTATTCGTGAATAAGGAAGATCTGGCCTTCCCTTTTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCACCATTTCCAACCTATTaGCAATGTGGCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAPFPTY*QCGHWA
Trigger: AGCCCAATGGCCACATTGCCAATAGGTTGGAAATGG...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTSSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGACCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp GCTCTTGAATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCCACTACCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: ALELAHTPGSFRIPHPPLPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...TAGTGGAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGARSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACCGCTTTGTAGAAGCTaGCCATTACGTAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKPLCRS*PLRSFG
Trigger: GCCAAAACTACGTAATGGCCAGCTTCTACAAAGCGG...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207417.3
CDS-3UTR CCA 90 bp ACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGGGGTTTGGACTTTCATaGGCACATTCTCAGTACATC +
Preference number: 4 (lower is better)
Translates to: TNFRDNLEPHTPLSNSEPGFGLS*AHSQYI
Trigger: GATGTACTGAGAATGTGCCCATGAAAGTCCAAACCC...CGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp ATAGGGTCTTGGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTTCCTCCGCTTTTTCTTaGGTTTGGACTTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: IGSWLAITLDSLACNSSCSSAFS*VWTFMG
Trigger: GCCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGA...ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR CCA 90 bp TGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGACAGAAAGGGAGTaGACGTACTGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSTNFRDNLEPHTPLSNSETERE*TYCRSW
Trigger: CCAGCTTCTACAGTACGTCCACTCCCTTTCTGTCTC...TGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTHVVSF*PKALPE
Trigger: CTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTGGFGW*GPFAMF
Trigger: GAACATAGCGAATGGCCCTCACCATCCAAACCCACC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEASGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIISGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCACTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEALPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGTGGAAATCTACAGGTaGCATACGAGCCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTVEIYR*HTSRGG
Trigger: ACCACCCCGGCTCGTATGTCACCTGTAGATTTCCAC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GTCACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VTSARKAAIFPMLLTLPSPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...ACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TCACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTATTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SHSAVPISETIWSLTHLLLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...TAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp TTTGGCCCGCCGGCTATTGGTGACTTTCTTAATAGGCTCTTGAATTGGCTCATAGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FGPPAIGDFLNRLLNWLIGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...TATGAGCCAATTCAAGAGCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp AGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLFRMLTLDTEDALFGGGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...TCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR GCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEATHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGATCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGGCATGGACACCGTCATaGTGGACACGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWAWTPS*WTRVET
Trigger: TGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGC...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCACAAAGGGGCTGACTaGCACAGAGGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWHKGAD*HRGHGH
Trigger: GTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCTTGCCCTTCCCCTTaGCTCTGCCTTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSCPSP*LCLLCA
Trigger: AGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR GCA 90 bp AATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NLEPHTPLSNSEPTSHKQILSTS*SSESRL
Trigger: CAACCTGGATTCACTGGAGCAAGATGTACTGAGAAT...CTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR GCA 90 bp AATAGGCTCTTGAATTGGCTCATACTCCTGGGTCGTTTCGTATTCCTCATCCTCACAGCTCGATCTGCATaGATTTGGATCTGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: NRLLNWLILLGRFVFLILTARSA*IWICKP
Trigger: AGGCTTACAGATCCAAATGCATGCAGATCGAGCTGT...GAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp TTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTGCTGAGTTCCTGACTTaGGTGTTCTCACCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FQDADIRYRRCTVRWNDFAEFLT*VFSPQG
Trigger: CCCCTGAGGTGAGAACACCCAAGTCAGGAACTCAGC...AAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp CAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTATTGCTGAGTTCCTGACTTaGGTGTTCTCACCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QDADIRYRRCTVRWNDFIAEFLT*VFSPQG
Trigger: CCCCTGAGGTGAGAACACCCAAGTCAGGAACTCAGC...AATAAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: NAWEEESRMTIEVANGQLTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTGCCACAGAGGGCATaGACACCGTCATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLPQRA*TPSCWT
Trigger: TGTCCAGCATGACGGTGTCCATGCCCTCTGTGGCAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEANRLLN*LILLGR
Trigger: ACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACCTATTGGCAATGTaGCCATTGGGCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEANLLAM*PLGLVL
Trigger: AAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCACTGCTCACAGAACTTaGGTTGCTGTCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCTAHRT*VAVHFQ
Trigger: TTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGT...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCACTGTATGCCCAGGAATaGTGTATCTTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEALYAQE*CIFTYS
Trigger: AGAGTAGGTGAAGATACACCATTCCTGGGCATACAG...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp AGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTATCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SNSEPTSHKQRSNTVALLSSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...TAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATACCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp AATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGACCAGTAAACTCATTTaGGCACTTTCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NLEPHTPLSNSEPTSHKQTSKLI*ALSWVW
Trigger: CCAAACCCAAGAAAGTGCCCAAATGAGTTTACTGGT...CTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CCA 90 bp GCTTTGTTAATGGTCTCATGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAACGTACTGTAGAAGCTaGCCATTACGTAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: ALLMVSCDRQRQSILDLVTYCRS*PLRSFG
Trigger: GCCAAAACTACGTAATGGCCAGCTTCTACAGTACGT...TACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCATGAGACCATTAACAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR CCA 90 bp AGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAACGTACTGTAGAAGCTaGCCATTACGTAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSLFRMLTLDTEDALFGGTYCRS*PLRSFG
Trigger: GCCAAAACTACGTAATGGCCAGCTTCTACAGTACGT...TCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCCATTACTCCAGCTGTaGCTAGGAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTPLLQL*LGVWVT
Trigger: TGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LDGCAISRQYWLGATGSKYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATAGGGTCTTGGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IGSWLAITLDSLACNSSCYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVCPGMVYLHLLFHLLSHAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...GTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
CDS-3UTR TCA 90 bp TTGGATGTTGACTATCAATTTGCATCACATTCTGCAGTACCAATTTCAGAGACACTTGGAGCCTGCAGCTaGCTCCTGGCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LDVDYQFASHSAVPISETLGACS*LLAFHL
Trigger: GAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAG...TGTCTCTGAAATTGGTACTGCAGAATGTGATGCAAATTGATAGTCAACATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTACGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAACTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGAGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp TCACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SHSAVPISETIWSLTHLLTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...TAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATATCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIISLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTGGGCTGCTGTGCCTaGTGTTCTCTACCGATGACA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLGCCA*CSLPMT
Trigger: TGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAACCAGGGGGTTCTGTATaGCCAGGAATGGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQPGGSV*PGMVYL
Trigger: AAGATACACCATTCCTGGGCATACAGAACCCCCTGG...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: QGVLYAQEWCIFTYSFIFTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...GAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208819.3
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWHILWW*VWMVRA
Trigger: GGCCCTCACCATCCAAACCCACCACCAGAGAATGTG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGAGCCGGGGTGGTCATaGCTGATACATACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTEPGWS*LIHTFH
Trigger: GTGAAAGGTATGTATCAGCCATGACCACCCCGGCTC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCACATACGAGCCGGGGTaGTCATGGCTGATACATACC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTTYEPG*SWLIHT
Trigger: GGTATGTATCAGCCATGACCACCCCGGCTCGTATGT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAACGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: KRGTAASLANHTSSQHHNNRLLN*LILLGR
Trigger: ACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTCTGTATGCCCAGGAATaGTGTATCTTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGALYAQE*CIFTYS
Trigger: AGAGTAGGTGAAGATACACCATTCCTGGGCATACAG...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGTAATTCTTCCTGTGTaGAGAAGCGGCCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTVILPV*RSGLLG
Trigger: ACCCAGCAGGCCGCTTCTCCACACAGGAAGAATTAC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAACAGCAATAGGGTCTTaGTTAGCGATTACACTAGAC +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEATAIGS*LAITLD
Trigger: GTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGT...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LSNSEPTSHKQRSNTVALPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...CAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
3UTR CAA 72 bp TTCGGTTCAACTGGGAACAAGAATCTATCATTGCCATaGGCTTTGCCAATCCTCTGTTCAACTCCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FGSTGNKNLSLP*ALPILCSTPSQ
Trigger: TTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTGAACCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp TCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SVCPGMVYLHLLFHLLSHYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...GTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR TCA 90 bp GGGCCATATACCTTCAACTTCAGGCCAAAAGAGAAATACATACAGAGAAAGTTATTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: GPYTFNFRPKEKYIQRKLFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...TAACTTTCTCTGTATGTATTTCTCTTTTGGCCTGAAGTTGAAGGTATATGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTTTCTCTGGCATGCCTaGGGAAGCTGTTACATTCGC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTFLWHA*GSCYIR
Trigger: GCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTVDSKL*LPWLLL
Trigger: CAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAAC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: EAKRGTAASLANHTSSQHRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGACGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: IWSLTHLLVTQSRLVTNRRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...TCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAATTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp AGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SNSEPTSHKQRSNTVALLTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...TAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR GCA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGCCAGGGGGTTCTGTATaGCCAGGAATGGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKPGGSV*PGMVYL
Trigger: AAGATACACCATTCCTGGGCATACAGAACCCCCTGG...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCCAGGGGGTTCTGTATaGCCAGGAATGGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTPGGSV*PGMVYL
Trigger: AAGATACACCATTCCTGGGCATACAGAACCCCCTGG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGCACACTTTATGAGATaGCTGGTCCCAGTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTAHFMR*LVPVVD
Trigger: ATCCACGACTGGGACCAGCCATCTCATAAAGTGTGC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCTGCCGCTGTTTCTTaGTTTTGCAGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSAAVS*FCSRPP
Trigger: TGGTGGCCTACTGCAAAACCAAGAAACAGCGGCAGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTGGACACCGTCATGCTaGACACGGGTGGAGACATTT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWWTPSC*TRVETF
Trigger: AAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTGGCAATGTGGCCATTaGGCTTGGTTCTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWWQCGH*AWFFWP
Trigger: GGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACAGCAATAGGGTCTTaGTTAGCGATTACACTAGAC +
Preference number: 4 (lower is better)
Translates to: VERYLDGCAISRQYWLGATAIGS*LAITLD
Trigger: GTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGT...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSSLSI*EAMLGS
Trigger: CGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCATCTCTTTCAATCTaGGAGGCAATGCGCACCGCT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSSLSI*EAMRTA
Trigger: AGCGGTGCGCATTGCCTCCCAGATTGAAAGAGATGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
3UTR CAA 72 bp TCAACTGGGAACAAGAATCTATCATTGCCATTGGCTTaGCCAATCCTCTGTTCAACTCCTTCCCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: STGNKNLSLPLA*PILCSTPSQFC
Trigger: GCAAAATTGGGAAGGAGTTGAACAGAGGATTGGCAAAGCCAATGGCAATGATAGATTCTTGTTCCCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCGGGGTGGTCATGGCTaGTACATACCTTTCACTATG +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWRGGHG*YIPFTM
Trigger: CATAGTGAAAGGTATGTATCAGCCATGACCACCCCG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCACGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEARFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATACGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: QREGQLLALQTIHPVNIIRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTGACATGCCAGTGGTaGGGTCGTTTGACTCAACAA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLTCQW*GRLTQQ
Trigger: TTGTTGAGTCAAACGACCTCACCACTGGCATGTCAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAAGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTACATCTTGCTCCAGTaGATCCAGGTTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWYILLQ*IQVGTC
Trigger: GCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAATGGTCACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: SEPTSHKQRSNTVALLMVTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...GACCATTAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTTGCACATTCTCTGGTaGTGGGTTTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLHILW*WVWMVR
Trigger: CCTCACCATCCAAACCCACCACCAGAGAATGTGCAA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGGGGGAGCTTGGCGTGTaGAAATCTACAGGTGACATA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWGELGV*KSTGDI
Trigger: TATGTCACCTGTAGATTTCCACACGCCAAGCTCCCC...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCGATTTAGGGGAGCTTaGCGTGTGGAAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWRFRGA*RVEIYR
Trigger: CCTGTAGATTTCCACACGCCAAGCTCCCCTAAATCG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAAAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQNRLLN*LILLGR
Trigger: ACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCCATTTCCAACCTATTaGCAATGTGGCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTPFPTY*QCGHWA
Trigger: AGCCCAATGGCCACATTGCCAATAGGTTGGAAATGG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGAGGAGTACTCAGAGCTaGTTTCACACCGAAGCACGA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWRSTQS*FHTEAR
Trigger: TCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCCTCCGCTTTTTCTTaGGTTTGGACTTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSSAFS*VWTFMG
Trigger: GCCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
3UTR CAA 72 bp GTGCAGTTTCCTGCTATATGTAATAGTAGCATGCTGTaGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: VQFPAICNSSML*GLLLSQSPVKQ
Trigger: TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACATATAGCAGGAAACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
3UTR CAA 72 bp TCACACAGACACAAGAAAGAGATGGCATATTGCTGCTaGAGATACATTCTCTCTTACACAGAGGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SHRHKKEMAYCC*RYILSYTEGHF
Trigger: AAAATGGCCCTCTGTGTAAGAGAGAATGTATCTCAAGCAGCAATATGCCATCTCTTTCTTGTGTCTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp AGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTATTTTCTGTTGTTTGTGGCTaGGTTCCTGACTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RMLTLDTEDALFGGMILFSVVCG*VPDLGV
Trigger: AACACCCAAGTCAGGAACTCAGCCACAAACAACAGA...AAATAAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR TCA 90 bp GGGCCATATACCTTCAACTTCAGGCCAAAAGAGAAATACATACAGAGAAAGTTAAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GPYTFNFRPKEKYIQRKLSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...TAACTTTCTCTGTATGTATTTCTCTTTTGGCCTGAAGTTGAAGGTATATGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAATACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGCTGTTCTCTACCGATaGCATCATGATTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTAVLYR*HHDYRV
Trigger: CACTCTGTAATCATGATGTCATCGGTAGAGAACAGC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp AGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTATTTCCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RMLTLDTEDALFGGMILFPFESE*GVLRAG
Trigger: ACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGG...AAATAAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTTGACTCAACAATGGTaGTGTTGGCAGAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLTQQW*CWQRHC
Trigger: ACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGGATGTAGATGTGGATaGAGAAGTATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTGCRCG*RSICAF
Trigger: GAAGGCGCAAATACTTCTTCATCCACATCTACATCC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp AATAACACACTGAGCCGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAACTTTAGGCCAGCAATaGAGAGGCAGAGGCTTACTA +
Preference number: 4 (lower is better)
Translates to: NNTLSRNELTIISSYSLTTLGQQ*RGRGLL
Trigger: TAGTAAGCCTCTGCCTCTGCATTGCTGGCCTAAAGT...TGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCGGCTCAGTGTGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR GCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp GGGCCATATACCTTCAACTTCAGGCCAAAAGAGAAATACATACAGAGAAAGTTAACTCATTTGGGCACTTaGACAAGTATCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GPYTFNFRPKEKYIQRKLTHLGT*TSILRG
Trigger: ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGT...TAACTTTCTCTGTATGTATTTCTCTTTTGGCCTGAAGTTGAAGGTATATGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR GCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGGCTGTTTCTTGGTTTTaGAGTAGGCCACCACACACA +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWAVSWF*SRPPHT
Trigger: TGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGC...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGACTAGACAAGCCAGAATaGGAACAATGCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: RNELTIISSYSLTAAFSGLDKPE*EQCRSS
Trigger: AGAAGATCTGCATTGTTCCCATTCTGGCTTGTCTAG...TCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CCA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKNRLLN*LILLGR
Trigger: ACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCAATAGGCTCTTGAATTaGCTCATACTCCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTNRLLN*LILLGR
Trigger: ACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GGGCCATATACCTTCAACTTCAGGCCAAAAGAGAAATACATACAGAGAAAGTTAACTGCTCACAGAACTTaGGTTGCTGTCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GPYTFNFRPKEKYIQRKLTAHRT*VAVHFQ
Trigger: TTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGT...TAACTTTCTCTGTATGTATTTCTCTTTTGGCCTGAAGTTGAAGGTATATGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCACTGCTCACAGAACTTaGGTTGCTGTCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTTAHRT*VAVHFQ
Trigger: TTGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp TTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTGCACTTTCTTGGGTTTaGACTTTCATGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: FQDADIRYRRCTVRWNDFALSWV*TFMGTF
Trigger: GAATGTGCCCATGAAAGTCCAAACCCAAGAAAGTGC...AAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGAGTGGCTTTCTGAAATaGTGCTTTCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWSGFLK*CFLCAH
Trigger: ATGGGCACACAGAAAGCATCATTTCAGAAAGCCACT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTACCGATGACATCATaGTTACAGAGTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLPMTS*LQSGFL
Trigger: CAGAAAGCCACTCTGTAATCATGATGTCATCGGTAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGAACCTATTGGCAATGTaGCCATTGGGCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWNLLAM*PLGLVL
Trigger: AAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTGTATGCCCAGGAATaGTGTATCTTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLYAQE*CIFTYS
Trigger: AGAGTAGGTGAAGATACACCATTCCTGGGCATACAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGACAGCAATAGGGTCTTaGTTAGCGATTACACTAGAC +
Preference number: 4 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKTAIGS*LAITLD
Trigger: GTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGT...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CCA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCACAGCAATAGGGTCTTaGTTAGCGATTACACTAGAC +
Preference number: 4 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTTAIGS*LAITLD
Trigger: GTCTAGTGTAATCGCTAACCAAGACCCTATTGCTGT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWPAADS*LFISFN
Trigger: ATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGGGGTTTGGACTTTCATaGGCACATTCTCAGTACATC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWGFGLS*AHSQYI
Trigger: GATGTACTGAGAATGTGCCCATGAAAGTCCAAACCC...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CCA 90 bp AATAACACACTGAGCCGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAACGTACTGTAGAAGCTaGCCATTACGTAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: NNTLSRNELTIISSYSLTTYCRS*PLRSFG
Trigger: GCCAAAACTACGTAATGGCCAGCTTCTACAGTACGT...TGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCGGCTCAGTGTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTACAGAGTGGCTTTCTaGAATGATGCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWYRVAF*NDAFCV
Trigger: CACACAGAAAGCATCATTTCAGAAAGCCACTCTGTA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTCTCTCTCCACAATATaGTCACTGGAGATGACGTTT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWSLSTI*SLEMTF
Trigger: AAACGTCATCTCCAGTGAGCATATTGTGGAGAGAGA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR GCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWILSTS*SSESRL
Trigger: CAACCTGGATTCACTGGAGCAAGATGTACTGAGAAT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGGCTTTTTCTTGGGTTTaGACTTTCATGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWAFSWV*TFMGTF
Trigger: GAATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGC...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CCA 90 bp AATAACACACTGAGCCGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: NNTLSRNELTIISSYSLTTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...TGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCGGCTCAGTGTGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
3UTR CAA 72 bp CTTTCCAATCACAAGAGAACAATCTTAGTCCTGCTTTaGAGACAGTATGGGGAAAATTACTTAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSNHKRTILVLL*RQYGENYLEKR
Trigger: TCTCTTCTCTAAGTAATTTTCCCCATACTGTCTCAAAAGCAGGACTAAGATTGTTCTCTTGTGATTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR TCA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCGTTTCCTAACTTGCTaGTCACTTTGCACATATATT +
Preference number: 4 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWRFLTC*SLCTYI
Trigger: AATATATGTGCAAAGTGATCAGCAAGTTAGGAAACG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CCA 90 bp GCTTTCTCAACTAACATGGCAATAGTAGATTACCAGATAAAGCACAGAAGAAAAACCAGTAAACTCATTTaGGCACTTGCACAAGTATCT +
Preference number: 4 (lower is better)
Translates to: AFSTNMAIVDYQIKHRRKTSKLI*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGT...TTTTCTTCTGTGCTTTATCTGGTAATCTACTATTGCCATGTTAGTTGAGAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS CCA 90 bp GCAGCAGCGGAGGCGAGCGGTCGGCGGACCCGGGATGCGGGACGCTaGGGCTGGTACCCAGCGGGCGGCGCGGGGCGCGTCGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: AAAEASGRRTRDAGR*GWYPAGGAGRVAIS
Trigger: TGAGATGGCGACGCGCCCCGCGCCGCCCGCTGGGTACCAGCCCCAGCGTCCCGCATCCCGGGTCCGCCGACCGCTCGCCTCCGCTGCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
CDS CCA 90 bp TACCTGCTGTCCTCCTTGAGCCGCCCGCAGGACGGGAAGGCTGAGTaGCCCCAGGTGTCCAGGCGCACGGTGAGTAGCGAGTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YLLSSLSRPQDGKAE*PQVSRRTVSSESFF
Trigger: GAAGAAGGACTCGCTACTCACCGTGCGCCTGGACACCTGGGGCCACTCAGCCTTCCCGTCCTGCGGGCGGCTCAAGGAGGACAGCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
ENSMUST00000239051.2
CDS TCA 90 bp TGTTCCGCTGCCGGAAGCCCATCGAGAGATGGGTCTGCACTCAGCTaGGTGGAGGGGCTGGAGGACCTCCCGCCAGCTCCCTCAGACATG +
Preference number: 5 (lower is better)
Translates to: CSAAGSPSRDGSALS*VEGLEDLPPAPSDM
Trigger: CATGTCTGAGGGAGCTGGCGGGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTTCCGGCAGCGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS GCA 90 bp GTCTGGCATATGTTCCGCTGCCGGAAGCCCATCGAGAGATGGGTCTaGACTCAGCTGAGTGGAGGGGCTGGAGGACCTCCCGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VWHMFRCRKPIERWV*TQLSGGAGGPPASS
Trigger: GGAGCTGGCGGGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 90 bp GCTTGGAGCCTGCAGCTGACTCCTGGCTTTTCATCTCTTTCAATCTaGGAGGCAATGCTGGGCTCGGGTCGCCTTCGGCGGGCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: AWSLQLTPGFSSLSI*EAMLGSGRLRRARA
Trigger: AGCCCGCGCCCGCCGAAGGCGACCCGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000239032.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CCA 90 bp GGCACGGCCAGGCCCAGGAGTCCAGGGCTTCTCCCATCTTCTGTGTaGGTGTCTGGCATATGTTCCGCTGCCGGAAGCCCATCGAGAGAT +
Preference number: 5 (lower is better)
Translates to: GTARPRSPGLLPSSV*VSGICSAAGSPSRD
Trigger: ATCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCAGACACCCACACAGAAGATGGGAGAAGCCCTGGACTCCTGGGCCTGGCCGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 90 bp GAAGCCCATCGAGAGATGGGTCTGCACTCAGCTGAGTGGAGGGGCTaGAGGACCTCCCGCCAGCTCCCTCAGACATGTCTGGGGGATAAA +
Preference number: 5 (lower is better)
Translates to: EAHREMGLHSAEWRG*RTSRQLPQTCLGDK
Trigger: TTTATCCCCCAGACATGTCTGAGGGAGCTGGCGGGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 90 bp CAGGCCCAGGAGTCCAGGGCTTCTCCCATCTTCTGTGTGGGTGTCTaGCATATGTTCCGCTGCCGGAAGCCCATCGAGAGATGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: QAQESRASPIFCVGV*HMFRCRKPIERWVC
Trigger: GCAGACCCATCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCAGACACCCACACAGAAGATGGGAGAAGCCCTGGACTCCTGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 90 bp TTCTCACCTCAGGGGTCCGAGCTGGAGAAGGGAAGGGCGGTGGAGTaGAGTGTAAGGGAGGAAAAGCAGACAGCCGGTTCTTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: FSPQGSELEKGRAVE*SVREEKQTAGSSGW
Trigger: CCACCCGGAAGAACCGGCTGTCTGCTTTTCCTCCCTTACACTCCACTCCACCGCCCTTCCCTTCTCCAGCTCGGACCCCTGAGGTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS-3UTR CAA 90 bp TGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCACCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: CLSATGTVGEAQDEGVQPPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...TGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp GCAGCTGTGGTTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGCCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AAVVGWSTDELLGHFLQEPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...CTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAACCACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp ATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGGGGGCGATTTACCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: MDTVMLDTGGDISEGGDLPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...TAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS GCA 90 bp AGGGCTTCTCCCATCTTCTGTGTGGGTGTCTGGCATATGTTCCGCTaGCGGAAGCCCATCGAGAGATGGGTCTGCACTCAGCTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: RASPIFCVGVWHMFR*RKPIERWVCTQLSG
Trigger: TCCACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCAGACACCCACACAGAAGATGGGAGAAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 90 bp GAGTGGAGTGTAAGGGAGGAAAAGCAGACAGCCGGTTCTTCCGGGTaGGTACTGCGGAAGGTTCAGAGGCCACAGCGACATGGTCACCTT +
Preference number: 5 (lower is better)
Translates to: EWSVREEKQTAGSSG*VLRKVQRPQRHGHL
Trigger: AAGGTGACCATGTCGCTGTGGCCTCTGAACCTTCCGCAGTACCCACCCGGAAGAACCGGCTGTCTGCTTTTCCTCCCTTACACTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 90 bp CTGGTTTCACACCGAAGCACGAGCTTGGAGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAATCTGGGAGGCAATGCTGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: LVSHRSTSLEPAADS*LFISFNLGGNAGLG
Trigger: CCCGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAGCTCGTGCTTCGGTGTGAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000239032.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS-3UTR CAA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: GETAGAHGILSLNEDLLQSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp ATGGACACCGTCATGCTGGACACGGGTGGAGACATTTCCGAAGGGGGCGATTTATCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: MDTVMLDTGGDISEGGDLSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...TAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: TVLVGCYWKQREGQLLALMWPLG*VLLARR
Trigger: CCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS TCA 90 bp TGGATGGTGAGGGCCATTCGCTATGTTCACCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAGCCGATCATGAAGCTTCTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: WMVRAIRYVHHVVSF*PKALPEPIMKLLPL
Trigger: CAGCGGCAGAAGCTTCATGATCGGCTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATGGTGAACATAGCGAATGGCCCTCACCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CCA 90 bp CTGGTTTCACACCGAAGCACGAGCTTGGAGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAATCTGGGAGGCAATGCGCACCGCTTG +
Preference number: 5 (lower is better)
Translates to: LVSHRSTSLEPAADS*LFISFNLGGNAHRL
Trigger: CAAGCGGTGCGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAGCTCGTGCTTCGGTGTGAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
ENSMUST00000239051.2
CDS-3UTR CAA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: RRRHSPMTISNVTALDLLSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp CAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: QPIGNVAIGLGSFGPPAISLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...AATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp AACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGCCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: NLGCCPFPTYWQCGHWAWPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...CCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATGCGCGGCCGCTACTGTaGGCATCGGGCTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: EAKRGTAASLANHTSSQHARPLL*ASGSMK
Trigger: CTTCATGGAGCCCGATGCCAACAGTAGCGGCCGCGC...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CAA 90 bp GACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGCAATGCGCACCGCTaGCACAGCACCCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: DSSLFRMLTLDTEDALFGGNAHR*HSTRLT
Trigger: GGTCAGCCGGGTGCTGTGCAAGCGGTGCGCATTGCC...ACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR CAA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLMWPLG*VLLARR
Trigger: CCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp AGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGACTCCTCCGCTTTTTCTaGGGTTTGGACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: RLLLFLSWLPVSHWDGGRLLRFF*GLDFHG
Trigger: CCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGAG...TCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp GCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: ALFELVACQPLGRWEKLRTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...CCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: PALFELVACQPLGRWEKLTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp ACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCATGGGATTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: TPYIRMNFLRRDRRCSWDSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...ATCCCATGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATTGGGCTTGGTTCTTTaGGCCCGCCGGCTATTGGTG +
Preference number: 5 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLLGLVL*ARRLLV
Trigger: CACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GGACTAAAAGGGAAGGCCAGATCTTCCTTATTCACGAATAGGGGCCATATACCTCCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GLKGKARSSLFTNRGHIPPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...AGGTATATGGCCCCTATTCGTGAATAAGGAAGATCTGGCCTTCCCTTTTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCTCCAGTGAATCCAGGTaGGCACTTGCACAAGTATCT +
Preference number: 5 (lower is better)
Translates to: PALFELVACQPLGRWEKLSSESR*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCAACCTGGATTCACTGGA...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp CATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAGCGCGGCCGCTACTGTaGGCATCGGGCTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: HSAVPISETIWSLTHLLVARPLL*ASGSMK
Trigger: CTTCATGGAGCCCGATGCCAACAGTAGCGGCCGCGC...TACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR CAA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAACGGCTGACCTCCTTCTaGAGGTTGCGGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LDGCAISRQYWLGATGSKRLTSF*RLRPVS
Trigger: GGAGACTGGCCGCAACCTCAAGAAGGAGGTCAGCCG...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CAA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGCTCCTCCGCTTTTTCTaGGGTTTGGACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: GETAGAHGILSLNEDLLQLLRFF*GLDFHG
Trigger: CCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGAG...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp GTTGCTGGGGGTGATGATCATACTTCTTCTCCCGTAGCCTCGGTGGCGTCACAACTCCTCCGCTTTTTCTaGGGTTTGGACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: VAGGDDHTSSPVASVASQLLRFF*GLDFHG
Trigger: CCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGAG...TTGTGACGCCACCGAGGCTACGGGAGAAGAAGTATGATCATCACCCCCAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: GQQMSCWVISSKRESEVESLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGATCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: GWMCHFKTVLVGCYWKQRSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...TCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: LDGCAISRQYWLGATGSKMWPLG*VLLARR
Trigger: CCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: TVLVGCYWKQREGQLLALSISNL*AMWPLG
Trigger: GCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp TCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAATGGTCCCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SEPTSHKQRSNTVALLMVPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...GACCATTAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TGTGTGGAGAAGCGGCCTGCTGGGTTAGTCCTGCTCTCAGCCAGACGGAAGGCAGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: CVEKRPAGLVLLSARRKAGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...TGCCTTCCGTCTGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp AGGCCTCTCTTCTTCCACAAAGGGGCTGACTGCCACAGAGGGCATGGACACCGTTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: RPLFFHKGADCHRGHGHRWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...ACGGTGTCCATGCCCTCTGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp GGGTGGAGACATTTCCGAAGGGGGCGATTTAGGGGAGCTTGGCGTGTGGAAATCCGCTTTTTCTTGGGTTaGGACTTTCATGGGCACATT +
Preference number: 5 (lower is better)
Translates to: GWRHFRRGRFRGAWRVEIRFFLG*DFHGHI
Trigger: AATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGCG...GATTTCCACACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp GTGGTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: VVNRRRHSPMTISNVTALGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...AAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CAA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CTGAGCCGAAATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTCCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LSRNELTIISSYSLTAAFPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...AAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATTTCGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VACQPLGRWEKLRMKEFSNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...GCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp AGGCTCCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGACTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: RLLLFLSWLPVSHWDGGRLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...TCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: PALFELVACQPLGRWEKLWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp GTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTCTCCAGTGAATCCAGGTaGGCACTTGCACAAGTATCT +
Preference number: 5 (lower is better)
Translates to: VTLRGDVATRKQHRLSMLSSESR*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCAACCTGGATTCACTGGA...GAGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGGCAATGCGCACCGCTaGCACAGCACCCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTGNAHR*HSTRLT
Trigger: GGTCAGCCGGGTGCTGTGCAAGCGGTGCGCATTGCC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209107.4
CDS-3UTR CAA 90 bp GTGGTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTCGCTTTTTCTTGGGTTaGGACTTTCATGGGCACATT +
Preference number: 5 (lower is better)
Translates to: VVNRRRHSPMTISNVTALRFFLG*DFHGHI
Trigger: AATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGCG...AAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp GGGACGGTGGGAGAAGCTCAGGATGAAGGAGTTCAGCCAAATAAGAGGATGACTACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: GTVGEAQDEGVQPNKRMTTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...AGTCATCCTCTTATTTGGCTGAACTCCTTCATCCTGAGCTTCTCCCACCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207678.3
ENSMUST00000208497.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp ATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGGTGACTTTCTTAACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: MWPLGLVLLARRLLVTFLTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...TAAGAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp CTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LGDSEGRCSNKKAAPTEHTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...ATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTTTGGCCCGCCGGCTATaGGTGACTTTCTTAATAGGC +
Preference number: 5 (lower is better)
Translates to: AGQQMSCWVISSKRESEVLARRL*VTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAA...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp CACTGTAGAGATGTTCCTGGACATATAAATCCAGAGGCTACAACAGATAGCCCTTTGGGCTTGGTTCTTTaGGCCCGCCGGCTATTGGTG +
Preference number: 5 (lower is better)
Translates to: HCRDVPGHINPEATTDSPLGLVL*ARRLLV
Trigger: CACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAA...AGGGCTATCTGTTGTAGCCTCTGGATTTATATGTCCAGGAACATCTCTACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GGAGAGACCGCAGGTGCTCATGGGATTCTCTCACTGAATGAGGATCTCCTCCAGAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: GETAGAHGILSLNEDLLQSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...CTGGAGGAGATCCTCATTCAGTGAGAGAATCCCATGAGCACCTGCGGTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp AATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGATGCCGGCTGACCTCCTTCTaGAGGTTGCGGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: NELTIISSYSLTAAFSGCRLTSF*RLRPVS
Trigger: GGAGACTGGCCGCAACCTCAAGAAGGAGGTCAGCCG...GCATCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238879.2
CDS-3UTR CAA 90 bp CCTGCTCTTTTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAAGTTTAGGAGCAGTTaGCAGATTAGTTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: PALFELVACQPLGRWEKLKFRSS*QISFCC
Trigger: ACAACAGAAACTAATCTGCAAACTGCTCCTAAACTT...GAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAAAAGAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CAA 90 bp CAGTCACACAGACACAAGAAAGAGATGGCATATTGCTGCTTGAGATACATTCTCTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: QSHRHKKEMAYCCLRYILSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...GAGAATGTATCTCAAGCAGCAATATGCCATCTCTTTCTTGTGTCTGTGTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATTGGCCCGCCGGCTATaGGTGACTTTCTTAATAGGC +
Preference number: 5 (lower is better)
Translates to: LDGCAISRQYWLGATGSKLARRL*VTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAA...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: GQQMSCWVISSKRESEVESISNL*AMWPLG
Trigger: GCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGTACAGCAATAGGGTCTaGGTTAGCGATTACACTAGA +
Preference number: 5 (lower is better)
Translates to: TVLVGCYWKQREGQLLALYSNRV*VSDYTR
Trigger: TCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTA...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGCCTTGAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: TVLVGCYWKQREGQLLALSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...CAAGGCTAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GTGGTGAACAGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: VVNRRRHSPMTISNVTALGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...AAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCTGTTCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp AGGAGGAGGCATTCCCCCATGACCATCAGCAATGTCACAGCCCTTGACTTGCTTTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: RRRHSPMTISNVTALDLLWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...AAGCAAGTCAAGGGCTGTGACATTGCTGATGGTCATGGGGGAATGCCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS-3UTR CAA 90 bp AACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGGCTATTGTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: NLLAMWPLGLVLLARRLLWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...CAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp GGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATGCTTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: GDSEGRCSNKKAAPTEHAWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...AGCATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp AATGCATGGGAAGAGGAGAGCAGAATGACCATTGAGGTAGCCAATGGACAGCTGTCCAGTGAATCCAGGTaGGCACTTGCACAAGTATCT +
Preference number: 5 (lower is better)
Translates to: NAWEEESRMTIEVANGQLSSESR*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCAACCTGGATTCACTGGA...CAGCTGTCCATTGGCTACCTCAATGGTCATTCTGCTCTCCTCTTCCCATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS CCA 90 bp CTGCTGTGCCTGCTGTTCTCTACCGATGACATCATGATTACAGAGTaGCTTTCTGAAATGATGCTTTCTGTGTGCCCATTACTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LLCLLFSTDDIMITE*LSEMMLSVCPLLQL
Trigger: CAGCTGGAGTAATGGGCACACAGAAAGCATCATTTCAGAAAGCCACTCTGTAATCATGATGTCATCGGTAGAGAACAGCAGGCACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS-3UTR CAA 90 bp TTTGAGTTGGTTGCCTGTCAGCCACTGGGACGGTGGGAGAAGCTCAGGATGAAGTCGTATTCGAATATCTaGTCCACAAATACCCACTTT +
Preference number: 5 (lower is better)
Translates to: FELVACQPLGRWEKLRMKSYSNI*STNTHF
Trigger: AAAGTGGGTATTTGTGGACAAGATATTCGAATACGA...CTTCATCCTGAGCTTCTCCCACCGTCCCAGTGGCTGACAGGCAACCAACTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208497.3
CDS-3UTR CAA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: AGQQMSCWVISSKRESEVTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp ATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: IWSLTHLLVTQSRLVTNRTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...TCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp ACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TNFRDNLEPHTPLSNSEPTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...CGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTAGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CACAGAACTTGGGTTGCTGTCCATTTCCAACCTATTGGCAATGTGGCCATTGGGGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: HRTWVAVHFQPIGNVAIGGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...CCCAATGGCCACATTGCCAATAGGTTGGAAATGGACAGCAACCCAAGTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAATTGGGCTTGGTTCTTTaGGCCCGCCGGCTATTGGTG +
Preference number: 5 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQLGLVL*ARRLLV
Trigger: CACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAA...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKMWPLG*VLLARR
Trigger: CCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCSISNL*AMWPLG
Trigger: GCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCCCCGGTCCTTCTTCTaGCCCTTCCCCTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWPRSFF*PFPLPL
Trigger: CAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp GTGTGGAAATCTACAGGTGACATACGAGCCGGGGTGGTCATGGCTGATACATACAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: VWKSTGDIRAGVVMADTYSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...GTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp TGGCTGCCAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: WLPGGSVCPGMVYLHLLFSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...AAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp CATTTCCAACCTATTGGCAATGTGGCCATTGGGCTTGGTTCTTTTGGCCCGCCGAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HFQPIGNVAIGLGSFGPPNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...CGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp TGGCTGCCAGGGGGTTCTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: WLPGGSVCPGMVYLHLLFLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...AAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAGAACCCCCTGGCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp CTAGGTGACTCTGAGGGGAGATGTAGCAACAAGAAAGCAGCACCGACTGAGCATCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: LGDSEGRCSNKKAAPTEHLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...ATGCTCAGTCGGTGCTGCTTTCTTGTTGCTACATCTCCCCTCAGAGTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GATGACACCCCGTACATAAGGATGAATTTCCTTAGGAGAGACCGCAGGTGCTCACGCTTTTTCTTGGGTTaGGACTTTCATGGGCACATT +
Preference number: 5 (lower is better)
Translates to: DDTPYIRMNFLRRDRRCSRFFLG*DFHGHI
Trigger: AATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGCG...TGAGCACCTGCGGTCTCTCCTAAGGAAATTCATCCTTATGTACGGGGTGTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207678.3
ENSMUST00000208598.2
CDS GCA 90 bp CGTATTCGAATATCTTGTCCACAAATACCCACTTTAGGCCAGCAATaGAGAGGCAGAGGCTTACTAGACAAGCCAGAATGGGAACAATGC +
Preference number: 5 (lower is better)
Translates to: RIRISCPQIPTLGQQ*RGRGLLDKPEWEQC
Trigger: GCATTGTTCCCATTCTGGCTTGTCTAGTAAGCCTCTGCCTCTGCATTGCTGGCCTAAAGTGGGTATTTGTGGACAAGATATTCGAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS-3UTR CAA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: QREGQLLALQTIHPVNIITCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ATAGGGTCTTGGTTAGCGATTACACTAGACAGCCTGGCCTGTAATTCTTCCTGTACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: IGSWLAITLDSLACNSSCTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...ACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LDGCAISRQYWLGATGSKTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp AGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SSLFRMLTLDTEDALFGGTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...TCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: GQQMSCWVISSKRESEVEGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSLVVG*DGEGHS
Trigger: CGAATGGCCCTCACCATCCAAACCCACCACCAGAGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAGCCAGAACCCATTTTCCTAAGCTGTACTTAAAGCTGTTACTCTTTATCAAGTTGGGCTTGGTTCTTTaGGCCCGCCGGCTATTGGTG +
Preference number: 5 (lower is better)
Translates to: QARTHFPKLYLKLLLFIKLGLVL*ARRLLV
Trigger: CACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAA...CTTGATAAAGAGTAACAGCTTTAAGTACAGCTTAGGAAAATGGGTTCTGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTTGGGCTTGGTTCTTTaGGCCCGCCGGCTATTGGTG +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLGLVL*ARRLLV
Trigger: CACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGATGTGGCCATTGGGCTaGGTTCTTTTGGCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWMWPLG*VLLARR
Trigger: CCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACAT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: VERYLDGCAISRQYWLGASISNL*AMWPLG
Trigger: GCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAATACTGCTCACAGAACTaGGGTTGCTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: LDGCAISRQYWLGATGSKYCSQN*GCCPFP
Trigger: TGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTA...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCATACTGCTCACAGAACTaGGGTTGCTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAYCSQN*GCCPFP
Trigger: TGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTA...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATACTGCTCACAGAACTaGGGTTGCTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRYCSQN*GCCPFP
Trigger: TGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp TTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGGACAGCTGCTATGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: FKTVLVGCYWKQREGQLLWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...TAGCAGCTGTCCCTCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTTCCAGTGAATCCAGGTaGGCACTTGCACAAGTATCT +
Preference number: 5 (lower is better)
Translates to: DSSLFRMLTLDTEDALFGSSESR*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCAACCTGGATTCACTGGA...ACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGTCGTATTCGAATATCTaGTCCACAAATACCCACTTT +
Preference number: 5 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRSYSNI*STNTHF
Trigger: AAAGTGGGTATTTGTGGACAAGATATTCGAATACGA...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CAA 90 bp TGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTAGAAGGCTCTAGCTCTAGGAAGTTTAGGAGCAGTTaGCAGATTAGTTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: CDRQRQSILDLVEGSSSRKFRSS*QISFCC
Trigger: ACAACAGAAACTAATCTGCAAACTGCTCCTAAACTT...CCTAGAGCTAGAGCCTTCTACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CAA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: VERYLDGCAISRQYWLGATCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LSNSEPTSHKQRSNTVALTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...CAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: DSSLFRMLTLDTEDALFGGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...ACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR CAA 90 bp GCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTTACAGCAATAGGGTCTaGGTTAGCGATTACACTAGA +
Preference number: 5 (lower is better)
Translates to: AGQQMSCWVISSKRESEVYSNRV*VSDYTR
Trigger: TCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTA...AACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GAAGCAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATTACAGCAATAGGGTCTaGGTTAGCGATTACACTAGA +
Preference number: 5 (lower is better)
Translates to: EAKRGTAASLANHTSSQHYSNRV*VSDYTR
Trigger: TCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTA...ATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: GQQMSCWVISSKRESEVESSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp TTGGCTGGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: LAGQQMSCWVISSKRESESSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...TTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: GQQMSCWVISSKRESEVELSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GCCAACCAAACCAAGTTAAAATGTCACTGGGTAGTGCAGCTGCTTTCCCCTTGTCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: ANQTKLKCHWVVQLLSPCLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...ACAAGGGGAAAGCAGCTGCACTACCCAGTGACATTTTAACTTGGTTTGGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp ACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTGGCACTTTCTTGGGTTaGGACTTTCATGGGCACATT +
Preference number: 5 (lower is better)
Translates to: TFCSTNFRDNLEPHTPLSGTFLG*DFHGHI
Trigger: AATGTGCCCATGAAAGTCCAAACCCAAGAAAGTGCC...ACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS TCA 90 bp ATATTCTCCAGAGTCAGCCAGGGACGCTTTGTTGATTCGAAGCTCTaGCTTCCCTGGCTTCTTCTGTATCTTGACGTTTTGTGGTTTATT +
Preference number: 5 (lower is better)
Translates to: IFSRVSQGRFVDSKL*LPWLLLYLDVLWFI
Trigger: AATAAACCACAAAACGTCAAGATACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGCTGACTCTGGAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS TCA 90 bp AATGAAGCCCAAATGGGGAATGGAAGAGGATCTAAGATGAGTTGCTaGCAGCTCGATCTGCATGCATTTGGATCTGTAAGCCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: NEAQMGNGRGSKMSC*QLDLHAFGSVSLVS
Trigger: AGAAACAAGGCTTACAGATCCAAATGCATGCAGATCGAGCTGTCAGCAACTCATCTTAGATCCTCTTCCATTCCCCATTTGGGCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000239151.2
CDS CCA 90 bp GATGACGTTTTTAGATACATATTGATTCACCAGTTGCACATTCTCTaGTGGTGGGTTTGGATGGTGAGGGCCATTCGCTATGTTCACCAT +
Preference number: 5 (lower is better)
Translates to: DDVFRYILIHQLHIL*WWVWMVRAIRYVHH
Trigger: ATGGTGAACATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAACGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS-3UTR CAA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: VERYLDGCAISRQYWLGAGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTTGGCCCGCCGGCTATaGGTGACTTTCTTAATAGGC +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLARRL*VTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATATACAGCAATAGGGTCTaGGTTAGCGATTACACTAGA +
Preference number: 5 (lower is better)
Translates to: QREGQLLALQTIHPVNIIYSNRV*VSDYTR
Trigger: TCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTA...TATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp TTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: LDGCAISRQYWLGATGSKSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...TTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAGTCTGACAGCAGCCTTTTCAGGATGCTGACATTAGATACAGAAGATGCACTGAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: QSDSSLFRMLTLDTEDALSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...CAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAAAGGCTGCTGTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GGTCAACAGATGAGCTGCTGGGTCATTTCCTCCAAGAGAGAAAGTGAAGTTGAGGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: GQQMSCWVISSKRESEVEGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...CTCAACTTCACTTTCTCTCTTGGAGGAAATGACCCAGCAGCTCATCTGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: EPHTPLSNSEPTSHKQRSGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...ACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGATGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GCTTTGTTAATGGTCTCATGCGACAGGCAGAGGCAGTCAATATTAGACCTGGTATGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: ALLMVSCDRQRQSILDLVWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...TACCAGGTCTAATATTGACTGCCTCTGCCTGTCGCATGAGACCATTAACAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238826.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTTCCAGTGAATCCAGGTaGGCACTTGCACAAGTATCT +
Preference number: 5 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLSSESR*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCAACCTGGATTCACTGGA...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp AGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTACATTTGGGCACTTTCTaGGGTTTGGACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: SNSEPTSHKQRSNTVALLHLGTF*GLDFHG
Trigger: CCCATGAAAGTCCAAACCCAAGAAAGTGCCCAAATG...TAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS CCA 90 bp GTTTTTAGATACATATTGATTCACCAGTTGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCCATTCGCTATGTTCACCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: VFRYILIHQLHILWW*VWMVRAIRYVHHVV
Trigger: AACAACATGGTGAACATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS-3UTR CAA 90 bp ATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCATTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 5 (lower is better)
Translates to: IWMDVPFQDSTGWVLLEAFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...TGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTTGGCCCGCCGGCTATaGGTGACTTTCTTAATAGGC +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLARRL*VTFLIG
Trigger: GCCTATTAAGAAAGTCACCAATAGCCGGCGGGCCAA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTCCATTTCCAACCTATaGGCAATGTGGCCATTGGGC +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSISNL*AMWPLG
Trigger: GCCCAATGGCCACATTGCCAATAGGTTGGAAATGGA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAGAGCCGACTAGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: ISETIWSLTHLLVTQSRLGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...TAGTCGGCTCTGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp ATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTACTGGAAGCAAAGAGAAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: MDVPFQDSTGWVLLEAKRNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...TCTCTTTGCTTCCAGTAGCACCCAACCAGTACTGTCTTGAAATGGCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATGCAATGCAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GQLLALQTIHPVNIIMQCNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...GCATTGCATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: VERYLDGCAISRQYWLGALSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp TCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAATGGTCCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: SEPTSHKQRSNTVALLMVLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...GACCATTAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: FCSTNFRDNLEPHTPLSNLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...GTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: VERYLDGCAISRQYWLGAWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: KRGTAASLANHTSSQHHNWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp AATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGATGCCATTTGGGCACTTTCTaGGGTTTGGACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: NELTIISSYSLTAAFSGCHLGTF*GLDFHG
Trigger: CCCATGAAAGTCCAAACCCAAGAAAGTGCCCAAATG...GCATCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCCTCCTCCGCTTTTTCTaGGGTTTGGACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTLLRFF*GLDFHG
Trigger: CCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGAG...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp CACTGTAGAGATGTTCCTGGACATATAAATCCAGAGGCTACAACAGATAGCCCTTTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 5 (lower is better)
Translates to: HCRDVPGHINPEATTDSPFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...AGGGCTATCTGTTGTAGCCTCTGGATTTATATGTCCAGGAACATCTCTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp AAGAGAGGGACAGCTGCTAGCCTTGCAAACCATACATCCAGTCAACATCATAATTTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 5 (lower is better)
Translates to: KRGTAASLANHTSSQHHNFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...ATTATGATGTTGACTGGATGTATGGTTTGCAAGGCTAGCAGCTGTCCCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTACTGCTCACAGAACTaGGGTTGCTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTYCSQN*GCCPFP
Trigger: TGGAAATGGACAGCAACCCAAGTTCTGTGAGCAGTA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp AGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTTAAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: SNSEPTSHKQRSNTVALLSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...TAACAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp GTCACTTCTGCAAGAAAAGCTGCAATCTTCCCAATGCTATTGACACTCCCTAGTGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: VTSARKAAIFPMLLTLPSGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...ACTAGGGAGTGTCAATAGCATTGGGAAGATTGCAGCTTTTCTTGCAGAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207470.3
CDS-3UTR CAA 90 bp GTAGAAAGGTATTTGGATGGATGTGCCATTTCAAGACAGTACTGGTTGGGTGCTAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VERYLDGCAISRQYWLGANLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...AGCACCCAACCAGTACTGTCTTGAAATGGCACATCCATCCAAATACCTTTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CTGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LYAQEWCIFTYSFIFCLTNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...AGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp TGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTCAAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: CSTNFRDNLEPHTPLSNSNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...TGAGTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FCSTNFRDNLEPHTPLSNNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...GTTACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp ACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCACACACCTCTTAGTAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TFCSTNFRDNLEPHTPLSNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...ACTAAGAGGTGTGTGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp CTTAGTAACTCAGAGCCGACTAGTCACAAACAGAGAAGTAACACAGTGGCTTTGTCGTATTCGAATATCTaGTCCACAAATACCCACTTT +
Preference number: 5 (lower is better)
Translates to: LSNSEPTSHKQRSNTVALSYSNI*STNTHF
Trigger: AAAGTGGGTATTTGTGGACAAGATATTCGAATACGA...CAAAGCCACTGTGTTACTTCTCTGTTTGTGACTAGTCGGCTCTGAGTTACTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000238812.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGACTTGCACAAGTATCTaGAGGGGTTTGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWTCTSI*RGLTGP
Trigger: AGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTATTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: QDADIRYRRCTVRWNDFIGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...AATAAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR CAA 90 bp TTTCAGGATGCTGACATTAGATACAGAAGATGCACTGTTCGGTGGAATGATTTTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAA +
Preference number: 5 (lower is better)
Translates to: FQDADIRYRRCTVRWNDFGHYVV*ATITSK
Trigger: TTTACTGGTGATCGTTGCCAAAACTACGTAATGGCC...AAAATCATTCCACCGAACAGTGCATCTTCTGTATCTAATGTCAGCATCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
CDS-3UTR CAA 90 bp AATGAACTTACCATCATTTCAAGTTACAGTCTGACAGCAGCCTTTTCAGGATGCAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: NELTIISSYSLTAAFSGCSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...GCATCCTGAAAAGGCTGCTGTCAGACTGTAACTTGAAATGATGGTAAGTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TGTATGCCCAGGAATGGTGTATCTTCACCTACTCTTTCATCTTCTGTCTCACTTGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: CMPRNGVSSPTLSSSVSLGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...AAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTCCTGGGCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTCCAGTGAATCCAGGTaGGCACTTGCACAAGTATCT +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWSSESR*ALAQVS
Trigger: AGATACTTGTGCAAGTGCCAACCTGGATTCACTGGA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp TTGGATGTTGACTATCAATTTGCATCACATTCTGCAGTACCAATTTCAGAGACAGGCACTTTCTTGGGTTaGGACTTTCATGGGCACATT +
Preference number: 5 (lower is better)
Translates to: LDVDYQFASHSAVPISETGTFLG*DFHGHI
Trigger: AATGTGCCCATGAAAGTCCAAACCCAAGAAAGTGCC...TGTCTCTGAAATTGGTACTGCAGAATGTGATGCAAATTGATAGTCAACATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207584.3
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp TGTAATAGTAGCATGCTGTTGGGTCTACTATTATCTCAGAGTCCAGTGAAGCAATTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 5 (lower is better)
Translates to: CNSSMLLGLLLSQSPVKQFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...TTGCTTCACTGGACTCTGAGATAATAGTAGACCCAACAGCATGCTACTATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGT +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTSSFPF*NHLNLS
Trigger: ACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp ATCAATTTGCATCACATTCTGCAGTACCAATTTCAGAGACAATCTGGAGCCTCAGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: INLHHILQYQFQRQSGASGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...TGAGGCTCCAGATTGTCTCTGAAATTGGTACTGCAGAATGTGATGCAAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239080.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTGGATGAAGAAGTATTaGCGCCTTCTGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTWMKKY*RLLLKL
Trigger: CAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCGCTTTTTCTTGGGTTaGGACTTTCATGGGCACATT +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWRFFLG*DFHGHI
Trigger: AATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGCG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000208205.3
ENSMUST00000208617.3
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCTTTCTTAATAGGCTCTaGAATTGGCTCATACTCCTG +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTFLNRL*NWLILL
Trigger: CAGGAGTATGAGCCAATTCAAGAGCCTATTAAGAAA...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGTACAGCAATAGGGTCTaGGTTAGCGATTACACTAGA +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWYSNRV*VSDYTR
Trigger: TCTAGTGTAATCGCTAACCAAGACCCTATTGCTGTA...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CAAAAACTGAATATATGGGAGGTTTCGCTGAAATACTGTGAAAAAGCAACCACCAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: QKLNIWEVSLKYCEKATTNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...GGTGGTTGCTTTTTCACAGTATTTCAGCGAAACCTCCCATATATTCAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGCTGTCGTTTCCTAACTaGCTGATCACTTTGCACATA +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWLSFPN*LITLHI
Trigger: TATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAG...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWGFFCI*TFCGLF
Trigger: GAATAAACCACAAAACGTCAAGATACAGAAGAAGCC...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS-3UTR CAA 90 bp CCAGTCAACATCATAATGCAATGCACAAAAAGCCAGCAAAAACTGAATATATGGAACTTGCTGATCACTTaGCACATATATTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: PVNIIMQCTKSQQKLNIWNLLIT*HIYSPE
Trigger: CTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTT...CCATATATTCAGTTTTTGCTGGCTTTTTGTGCATTGCATTATGATGTTGACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208617.3
ENSMUST00000209107.4
ENSMUST00000238791.2
CDS GCA 72 bp AGCAGCAGCGGAGGCGAGCGGTCGGCGGACCCGGGATaGGGGACGCTGGGGCTGGTACCCAGCGGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: SSSGGERSADPG*GTLGLVPSGRR
Trigger: GCGCCGCCCGCTGGGTACCAGCCCCAGCGTCCCGCATCCCGGGTCCGCCGACCGCTCGCCTCCGCTGCTGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
CDS GCA 72 bp AGGTGGCGGGTCCTGGGCGGGCTGGTCCCGCGCCCCTaGCCCTGCCTCGCCTGCTGCCTTCCTGTCGAGTGC +
Preference number: 6 (lower is better)
Translates to: RWRVLGGLVPRP*PCLACCLPVEC
Trigger: GCACTCGACAGGAAGGCAGCAGGCGAGGCAGGGGCAGGGGCGCGGGACCAGCCCGCCCAGGACCCGCCACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
CDS GCA 72 bp CCTGCCTCGCCTGCTGCCTTCCTGTCGAGTGCCCCCTaGTGCCGCCGCGGCGGGTGCACCTTTCCCTCGATC +
Preference number: 6 (lower is better)
Translates to: PASPAAFLSSAP*CRRGGCTFPSI
Trigger: GATCGAGGGAAAGGTGCACCCGCCGCGGCGGCAGCAGGGGGCACTCGACAGGAAGGCAGCAGGCGAGGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
CDS TCA 72 bp AGGAAGCTGTTACATTCGCGAGGGCCTCCCAGGCCATaGAGACGTCCTCGTGGGCCCCCAGCTGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RKLLHSRGPPRP*RRPRGPPAGLL
Trigger: CAGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCATGGCCTGGGAGGCCCTCGCGAATGTAACAGCTTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 72 bp GCGCACCGCTTGCACAGCACCCGGCTGACCTCCTTCTaGAGGTTGCGGCCAGTCTCCAGCGGAGGAAACGAG +
Preference number: 6 (lower is better)
Translates to: AHRLHSTRLTSF*RLRPVSSGGNE
Trigger: CTCGTTTCCTCCGCTGGAGACTGGCCGCAACCTCAAGAAGGAGGTCAGCCGGGTGCTGTGCAAGCGGTGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
ENSMUST00000239051.2
CDS CAA 90 bp GGAGGCAATGCGCACCGCTTGCACAGCACCCGGCTGACCTCCTTCTaGAGGTTGCGGCCAGTCTCCAGCGGAGGAAACGAGGCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: GGNAHRLHSTRLTSF*RLRPVSSGGNEARK
Trigger: CTTCCGAGCCTCGTTTCCTCCGCTGGAGACTGGCCGCAACCTCAAGAAGGAGGTCAGCCGGGTGCTGTGCAAGCGGTGCGCATTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
ENSMUST00000239051.2
CDS TCA 72 bp GGAAGGCTGAGTGGCCCCAGGTGTCCAGGCGCACGGTaGGTAGCGAGTCCTTCTTCAAGCCCCCGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: GRLSGPRCPGAR*VASPSSSPRLS
Trigger: TGAAAGCCGGGGGCTTGAAGAAGGACTCGCTACTCACCGTGCGCCTGGACACCTGGGGCCACTCAGCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
ENSMUST00000239051.2
CDS GCA 72 bp ATGTTCCGCTGCCGGAAGCCCATCGAGAGATGGGTCTaGACTCAGCTGAGTGGAGGGGCTGGAGGACCTCCC +
Preference number: 6 (lower is better)
Translates to: MFRCRKPIERWV*TQLSGGAGGPP
Trigger: GGGAGGTCCTCCAGCCCCTCCACTCAGCTGAGTGCAGACCCATCTCTCGATGGGCTTCCGGCAGCGGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 72 bp CTGGCTTTTCATCTCTTTCAATCTGGGAGGCAATGCTaGGCTCGGGTCGCCTTCGGCGGGCGCGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: LAFHLFQSGRQC*ARVAFGGRGLP
Trigger: GGGAAGCCCGCGCCCGCCGAAGGCGACCCGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000239032.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CCA 72 bp AGGCCCAGGAGTCCAGGGCTTCTCCCATCTTCTGTGTaGGTGTCTGGCATATGTTCCGCTGCCGGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: RPRSPGLLPSSV*VSGICSAAGSP
Trigger: TGGGCTTCCGGCAGCGGAACATATGCCAGACACCCACACAGAAGATGGGAGAAGCCCTGGACTCCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 72 bp CAGGGGTCCGAGCTGGAGAAGGGAAGGGCGGTGGAGTaGAGTGTAAGGGAGGAAAAGCAGACAGCCGGTTCT +
Preference number: 6 (lower is better)
Translates to: QGSELEKGRAVE*SVREEKQTAGS
Trigger: AGAACCGGCTGTCTGCTTTTCCTCCCTTACACTCCACTCCACCGCCCTTCCCTTCTCCAGCTCGGACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS GCA 72 bp AGGAAAAGCAGACAGCCGGTTCTTCCGGGTGGGTACTaGGGAAGGTTCAGAGGCCACAGCGACATGGTCACC +
Preference number: 6 (lower is better)
Translates to: RKSRQPVLPGGY*GRFRGHSDMVT
Trigger: GGTGACCATGTCGCTGTGGCCTCTGAACCTTCCGCAGTACCCACCCGGAAGAACCGGCTGTCTGCTTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS GCA 72 bp CCCATCTTCTGTGTGGGTGTCTGGCATATGTTCCGCTaGCGGAAGCCCATCGAGAGATGGGTCTGCACTCAG +
Preference number: 6 (lower is better)
Translates to: PIFCVGVWHMFR*RKPIERWVCTQ
Trigger: CTGAGTGCAGACCCATCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCAGACACCCACACAGAAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 72 bp GAGTCCAGGGCTTCTCCCATCTTCTGTGTGGGTGTCTaGCATATGTTCCGCTGCCGGAAGCCCATCGAGAGA +
Preference number: 6 (lower is better)
Translates to: ESRASPIFCVGV*HMFRCRKPIER
Trigger: TCTCTCGATGGGCTTCCGGCAGCGGAACATATGCCAGACACCCACACAGAAGATGGGAGAAGCCCTGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 72 bp GTAAGGGAGGAAAAGCAGACAGCCGGTTCTTCCGGGTaGGTACTGCGGAAGGTTCAGAGGCCACAGCGACAT +
Preference number: 6 (lower is better)
Translates to: VREEKQTAGSSG*VLRKVQRPQRH
Trigger: ATGTCGCTGTGGCCTCTGAACCTTCCGCAGTACCCACCCGGAAGAACCGGCTGTCTGCTTTTCCTCCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CAA 72 bp CAAGCCAGAATGGGAACAATGCAGATCTTCTCGGAGTaGAGGCACCCTCTGAGACGCTCCGCTTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: QARMGTMQIFSE*RHPLRRSASRQ
Trigger: CTGCCTGGAAGCGGAGCGTCTCAGAGGGTGCCTCAACTCCGAGAAGATCTGCATTGTTCCCATTCTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 72 bp CACCGAAGCACGAGCTTGGAGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAATCTGGGAGGCAATGCG +
Preference number: 6 (lower is better)
Translates to: HRSTSLEPAADS*LFISFNLGGNA
Trigger: CGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAGCTCGTGCTTCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238879.2
ENSMUST00000239051.2
CDS CAA 90 bp CTTACTAGACAAGCCAGAATGGGAACAATGCAGATCTTCTCGGAGTaGAGGCACCCTCTGAGACGCTCCGCTTCCAGGCAGACACAGCAG +
Preference number: 6 (lower is better)
Translates to: LTRQARMGTMQIFSE*RHPLRRSASRQTQQ
Trigger: CTGCTGTGTCTGCCTGGAAGCGGAGCGTCTCAGAGGGTGCCTCAACTCCGAGAAGATCTGCATTGTTCCCATTCTGGCTTGTCTAGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CCA 72 bp CACCGAAGCACGAGCTTGGAGCCTGCAGCTGACTCCTaGCTTTTCATCTCTTTCAATCTGGGAGGCAATGCT +
Preference number: 6 (lower is better)
Translates to: HRSTSLEPAADS*LFISFNLGGNA
Trigger: AGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAGCTCGTGCTTCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000239032.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS TCA 72 bp AGGGCCATTCGCTATGTTCACCATGTTGTTTCGTTCTaGCCGAAGGCTCTGCCGGAGCCGATCATGAAGCTT +
Preference number: 6 (lower is better)
Translates to: RAIRYVHHVVSF*PKALPEPIMKL
Trigger: AAGCTTCATGATCGGCTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATGGTGAACATAGCGAATGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CCA 72 bp GCGTGTGGAAATCTACAGGTGACATACGAGCCGGGGTaGTCATGGCTGATACATACCTTTCACTATGAGGAG +
Preference number: 6 (lower is better)
Translates to: ACGNLQVTYEPG*SWLIHTFHYEE
Trigger: CTCCTCATAGTGAAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238842.2
ENSMUST00000239067.2
CDS CAA 90 bp GCTGACATGCCAGTGGTGAGGTCGTTTGACTCAACAATGGTGATGTaGGCAGAGGCACTGTCGTTTCCTAACTTGCTGATCACTTTGCAC +
Preference number: 6 (lower is better)
Translates to: ADMPVVRSFDSTMVM*AEALSFPNLLITLH
Trigger: GTGCAAAGTGATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAAACGACCTCACCACTGGCATGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000239051.2
ENSMUST00000239080.2
CDS TCA 72 bp ACCAGTTGCACATTCTCTGGTGGTGGGTTTGGATGGTaGGGGCCATTCGCTATGTTCACCATGTTGTTTCGT +
Preference number: 6 (lower is better)
Translates to: TSCTFSGGGFGW*GPFAMFTMLFR
Trigger: ACGAAACAACATGGTGAACATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 72 bp CCAGTGGTGAGGTCGTTTGACTCAACAATGGTGATGTaGGCAGAGGCACTGTCGTTTCCTAACTTGCTGATC +
Preference number: 6 (lower is better)
Translates to: PVVRSFDSTMVM*AEALSFPNLLI
Trigger: GATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAAACGACCTCACCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000239051.2
ENSMUST00000239080.2
CDS CAA 90 bp CCAGTCGTGGATGTAGATGTGGCGTTTGACTCAACAATGGTGATGTaGGCAGAGGCACTGTCGTTTCCTAACTTGCTGATCACTTTGCAC +
Preference number: 6 (lower is better)
Translates to: PVVDVDVAFDSTMVM*AEALSFPNLLITLH
Trigger: GTGCAAAGTGATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAAACGCCACATCTACATCCACGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS TCA 72 bp CAGCTCATTCCCGTTCTTGAACCATTTGAATCTGAGTaGGGAGTACTCAGAGCTGGTTTCACACCGAAGCAC +
Preference number: 6 (lower is better)
Translates to: QLIPVLEPFESE*GVLRAGFTPKH
Trigger: GTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CCA 72 bp TTGATTCACCAGTTGCACATTCTCTGGTGGTGGGTTTaGATGGTGAGGGCCATTCGCTATGTTCACCATGTT +
Preference number: 6 (lower is better)
Translates to: LIHQLHILWWWV*MVRAIRYVHHV
Trigger: AACATGGTGAACATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 72 bp GGGTCAAGGTGGGTAGGAGAGTCGTATTCGAATATCTaGTCCACAAATACCCACTTTAGGCCAGCAATGCAG +
Preference number: 6 (lower is better)
Translates to: GSRWVGESYSNI*STNTHFRPAMQ
Trigger: CTGCATTGCTGGCCTAAAGTGGGTATTTGTGGACAAGATATTCGAATACGACTCTCCTACCCACCTTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073884.7
ENSMUST00000207584.3
ENSMUST00000208497.3
ENSMUST00000238812.2
ENSMUST00000238842.2
CDS CAA 72 bp ATTGATTCACCAGTTGCACATTCTCTGGTGGTGGGTTaGGATGGTGAGGGCCATTCGCTATGTTCACCATGT +
Preference number: 6 (lower is better)
Translates to: IDSPVAHSLVVG*DGEGHSLCSPC
Trigger: ACATGGTGAACATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 72 bp CACATATATTCTCCAGAGTCAGCCAGGGACGCTTTGTaGATTCGAAGCTCTGACTTCCCTGGCTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: HIYSPESARDAL*IRSSDFPGFFC
Trigger: ACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGCTGACTCTGGAGAATATATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 72 bp TTGCACATATATTCTCCAGAGTCAGCCAGGGACGCTTaGTTGATTCGAAGCTCTGACTTCCCTGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LHIYSPESARDA*LIRSSDFPGFF
Trigger: GAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGCTGACTCTGGAGAATATATGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 72 bp CCTCTTCTGGTAGAGCTCCTCCGCTTTTTCTTGGGTTaGGACTTTCATGGGCACATTCTCAGTACATCTTGC +
Preference number: 6 (lower is better)
Translates to: PLLVELLRFFLG*DFHGHILSTSC
Trigger: GCAAGATGTACTGAGAATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGAGCTCTACCAGAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000238842.2
CDS CAA 90 bp GACTCAACAATGGTGATGTTGGCAGAGGCACTGTCGTTTCCTAACTaGCTGATCACTTTGCACATATATTCTCCAGAGTCAGCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: DSTMVMLAEALSFPN*LITLHIYSPESARD
Trigger: GTCCCTGGCTGACTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTGTTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 90 bp CTGGTAGAGCTCCTCCGCTTTGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTTGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: LVELLRFVEAGHYVV*ATITSKLIWALAQV
Trigger: TACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAAAGCGGAGGAGCTCTACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000208819.3
ENSMUST00000239067.2
CDS CAA 90 bp ATCACTTTGCACATATATTCTCCAGAGTCAGCCAGGGACGCTTTGTaGATTCGAAGCTCTGACTTCCCTGGCTTCTTCTGTATCTTGACG +
Preference number: 6 (lower is better)
Translates to: ITLHIYSPESARDAL*IRSSDFPGFFCILT
Trigger: CGTCAAGATACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGCTGACTCTGGAGAATATATGTGCAAAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 90 bp CAGAAAGGGAGTGGACGTACTGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTTGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: QKGSGRTVEAGHYVV*ATITSKLIWALAQV
Trigger: TACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAGTACGTCCACTCCCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
CDS TCA 72 bp ACATATATTCTCCAGAGTCAGCCAGGGACGCTTTGTTaGTTCGAAGCTCTGACTTCCCTGGCTTCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: TYILQSQPGTLC*FEALTSLASSV
Trigger: TACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGCTGACTCTGGAGAATATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS TCA 72 bp CCCAAACTGAAAGGCATGTTTCTCACCTCAAGCGTCTaGAGCTGGTGTCTGCTTAGAGGAAGAAAACAACTG +
Preference number: 6 (lower is better)
Translates to: PKLKGMFLTSSV*SWCLLRGRKQL
Trigger: CAGTTGTTTTCTTCCTCTAAGCAGACACCAGCTTCAGACGCTTGAGGTGAGAAACATGCCTTTCAGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239000.2
CDS GCA 72 bp GGTTTGGACTTTCATGGGCACATTCTCAGTACATCTTaGTCCAGTGAATCCAGGTTGGCACTTGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: GLDFHGHILSTS*SSESRLALAQV
Trigger: TACTTGTGCAAGTGCCAACCTGGATTCACTGGAGCAAGATGTACTGAGAATGTGCCCATGAAAGTCCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000207584.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000238842.2
ENSMUST00000239080.2
CDS CCA 72 bp TACATATTGATTCACCAGTTGCACATTCTCTGGTGGTaGGTTTGGATGGTGAGGGCCATTCGCTATGTTCAC +
Preference number: 6 (lower is better)
Translates to: YILIHQLHILWW*VWMVRAIRYVH
Trigger: GTGAACATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 72 bp CTCCTCCGCTTTGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: LLRFVEAGHYVV*ATITSKLIWAL
Trigger: AAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAAAGCGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207417.3
ENSMUST00000208819.3
ENSMUST00000239067.2
CDS CAA 72 bp GATGTAGATGTGGCGTTTGACTCAACAATGGTGATGTaGGCAGAGGCACTGTCGTTTCCTAACTTGCTGATC +
Preference number: 6 (lower is better)
Translates to: DVDVAFDSTMVM*AEALSFPNLLI
Trigger: GATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTGTTGAGTCAAACGCCACATCTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 90 bp GCTTTGTTGATTCGAAGCTCTGACTTCCCTGGCTTCTTCTGTATCTaGACGTTTTGTGGTTTATTCCTACGGTTCAGCTCATTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: ALLIRSSDFPGFFCI*TFCGLFLRFSSFPF
Trigger: GAACGGGAATGAGCTGAACCGTAGGAATAAACCACAAAACGTCAAGATACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS TCA 72 bp ACAAGTATCTTGAGGGGTTTGACAGGTCCTTCACCATaGAGCACTCGCCTCCATTCACACAGAAAGTTTTCT +
Preference number: 6 (lower is better)
Translates to: TSILRGLTGPSP*STRLHSHRKFS
Trigger: AGAAAACTTTCTGTGTGAATGGAGGCGAGTGCTTCATGGTGAAGGACCTGTCAAACCCCTCAAGATACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 26 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207584.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000208931.2
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238812.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238842.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS TCA 72 bp CAAATGGGGAATGGAAGAGGATCTAAGATGAGTTGCTaGCAGCTCGATCTGCATGCATTTGGATCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: QMGNGRGSKMSC*QLDLHAFGSVS
Trigger: GCTTACAGATCCAAATGCATGCAGATCGAGCTGTCAGCAACTCATCTTAGATCCTCTTCCATTCCCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000239151.2
CDS TCA 72 bp ATGAAGCCCAAATGGGGAATGGAAGAGGATCTAAGATaGGTTGCTGACAGCTCGATCTGCATGCATTTGGAT +
Preference number: 6 (lower is better)
Translates to: MKPKWGMEEDLR*VADSSICMHLD
Trigger: ATCCAAATGCATGCAGATCGAGCTGTCAGCAACTCATCTTAGATCCTCTTCCATTCCCCATTTGGGCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000238816.2
ENSMUST00000239151.2
CDS CAA 72 bp CCCAAGATGCTTGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: PKMLVEAGHYVV*ATITSKLIWAL
Trigger: AAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAAGCATCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073884.7
ENSMUST00000207470.3
ENSMUST00000208497.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000239151.2
CDS CAA 72 bp AGTGGACGTACTGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: SGRTVEAGHYVV*ATITSKLIWAL
Trigger: AAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAGTACGTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000238812.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
CDS CAA 90 bp CCTTTTCCTCCTAGAAGTCATGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTTGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: PFPPRSHVEAGHYVV*ATITSKLIWALAQV
Trigger: TACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACATGACTTCTAGGAGGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000208488.2
ENSMUST00000208931.2
ENSMUST00000209022.3
ENSMUST00000238816.2
CDS CCA 72 bp TTTAGATACATATTGATTCACCAGTTGCACATTCTCTaGTGGTGGGTTTGGATGGTGAGGGCCATTCGCTAT +
Preference number: 6 (lower is better)
Translates to: FRYILIHQLHIL*WWVWMVRAIRY
Trigger: ATAGCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 72 bp TGTGGTTTATTCCTACGGTTCAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGTGAGGAGTACTCAGAG +
Preference number: 6 (lower is better)
Translates to: CGLFLRFSSFPF*NHLNLSEEYSE
Trigger: CTCTGAGTACTCCTCACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCTGAACCGTAGGAATAAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 72 bp ATGGTGATGTTGGCAGAGGCACTGTCGTTTCCTAACTaGCTGATCACTTTGCACATATATTCTCCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: MVMLAEALSFPN*LITLHIYSPES
Trigger: TGACTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 72 bp CCTAGAAGTCATGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: PRSHVEAGHYVV*ATITSKLIWAL
Trigger: AAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACATGACTTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000208488.2
ENSMUST00000208931.2
ENSMUST00000209022.3
ENSMUST00000238816.2
CDS CAA 90 bp TCTCTCCACAATATGCTCACTGGAGATGACGTTTTTAGATACATATaGATTCACCAGTTGCACATTCTCTGGTGGTGGGTTTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: SLHNMLTGDDVFRYI*IHQLHILWWWVWMV
Trigger: CACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAACGTCATCTCCAGTGAGCATATTGTGGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2
CDS CAA 90 bp TTGACGTTTTGTGGTTTATTCCTACGGTTCAGCTCATTCCCGTTCTaGAACCATTTGAATCTGAGTGAGGAGTACTCAGAGCTGGTTTCA +
Preference number: 6 (lower is better)
Translates to: LTFCGLFLRFSSFPF*NHLNLSEEYSELVS
Trigger: TGAAACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCTGAACCGTAGGAATAAACCACAAAACGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000208205.3
ENSMUST00000208488.2
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209022.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238826.2
ENSMUST00000238879.2
ENSMUST00000239032.2
ENSMUST00000239051.2
ENSMUST00000239067.2
ENSMUST00000239080.2
ENSMUST00000239151.2
CDS CAA 90 bp AAATTCAATCCCAAGATGCTTGTAGAAGCTGGCCATTACGTAGTTTaGGCAACGATCACCAGTAAACTCATTTGGGCACTTGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: KFNPKMLVEAGHYVV*ATITSKLIWALAQV
Trigger: TACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAAGCATCTTGGGATTGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073884.7
ENSMUST00000207470.3
ENSMUST00000208497.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000239151.2
CDS CAA 72 bp AATATGCTCACTGGAGATGACGTTTTTAGATACATATaGATTCACCAGTTGCACATTCTCTGGTGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: NMLTGDDVFRYI*IHQLHILWWWV
Trigger: AACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAACGTCATCTCCAGTGAGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENSMUST00000073884.7
ENSMUST00000207417.3
ENSMUST00000207470.3
ENSMUST00000207678.3
ENSMUST00000208205.3
ENSMUST00000208335.2
ENSMUST00000208488.2
ENSMUST00000208497.3
ENSMUST00000208598.2
ENSMUST00000208617.3
ENSMUST00000208819.3
ENSMUST00000209107.4
ENSMUST00000238791.2
ENSMUST00000238816.2
ENSMUST00000238842.2
ENSMUST00000239067.2
ENSMUST00000239151.2