RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058440

Ensembl transcript IDs: ENSMUST00000004761.13, ENSMUST00000069808.13, ENSMUST00000069831.15, ENSMUST00000115199.8, ENSMUST00000115200.8, ENSMUST00000115204.8, ENSMUST00000115206.8, ENSMUST00000115208.8, ENSMUST00000115209.8, ENSMUST00000115211.8, ENSMUST00000115212.8, ENSMUST00000123194.8, ENSMUST00000132866.2, ENSMUST00000133928.8, ENSMUST00000148990.8, ENSMUST00000167972.9, ENSMUST00000170535.9

Found 714 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCCATCCATGGTGACTGCGCTGTCCGATATCCTGGTGGTCACTaGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCT +
Preference number: 1 (lower is better)
Translates to: LAIHGDCAVRYPGGH*GHGHLHRPVALGEA
Trigger: AGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR GCA 90 bp ACTGCGCTGTCCGATATCCTGGTGGTCACTGGGGCCATGGCCACCTaGACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTGG +
Preference number: 1 (lower is better)
Translates to: TALSDILVVTGAMAT*TGPLPWARLVTTVW
Trigger: CCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR GCA 90 bp CTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCTGCCGTGTGTCTCTaGTGGCAAAGCGCACATGTGCGCACGCACTCTCTGTCCCTGGAC +
Preference number: 1 (lower is better)
Translates to: LPVARSAPGPAAVCL*WQSAHVRTHSLSLD
Trigger: GTCCAGGGACAGAGAGTGCGTGCGCACATGTGCGCTTTGCCAGCAGAGACACACGGCAGCTGGCCCAGGTGCTGACCTTGCCACAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 90 bp CAGGAGCCTGCAGGGCGTTTACCTGCCTGTGGCAAGGTCAGCACCTaGGCCAGCTGCCGTGTGTCTCTGCTGGCAAAGCGCACATGTGCG +
Preference number: 1 (lower is better)
Translates to: QEPAGRLPACGKVST*ASCRVSLLAKRTCA
Trigger: CGCACATGTGCGCTTTGCCAGCAGAGACACACGGCAGCTGGCCCAGGTGCTGACCTTGCCACAGGCAGGTAAACGCCCTGCAGGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 90 bp CTGTTCCAAGGTCACCACCTCCACAGCCTGGCCATCCATGGTGACTaGGCTGTCCGATATCCTGGTGGTCACTGGGGCCATGGCCACCTG +
Preference number: 1 (lower is better)
Translates to: LFQGHHLHSLAIHGD*AVRYPGGHWGHGHL
Trigger: CAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACCTTGGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR TCA 90 bp GCTACTGTTCCAAGGTCACCACCTCCACAGCCTGGCCATCCATGGTaGCTGCGCTGTCCGATATCCTGGTGGTCACTGGGGCCATGGCCA +
Preference number: 1 (lower is better)
Translates to: ATVPRSPPPQPGHPW*LRCPISWWSLGPWP
Trigger: TGGCCATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACCTTGGAACAGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR TCA 90 bp ACAGAAGCTCACAGTGACAATGACTGCTCAGTGCAAGCCACACTGTaGGCAGGAAAGCTGTCCCAGGCCTGTGCCGCCAGGATGTGCCTG +
Preference number: 1 (lower is better)
Translates to: TEAHSDNDCSVQATL*AGKLSQACAARMCL
Trigger: CAGGCACATCCTGGCGGCACAGGCCTGGGACAGCTTTCCTGCTCACAGTGTGGCTTGCACTGAGCAGTCATTGTCACTGTGAGCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 90 bp GAGCTGGACTTACAGGCAGTTGGGACCGGCCTCACATGGGTTTTCTaGAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCC +
Preference number: 1 (lower is better)
Translates to: ELDLQAVGTGLTWVF*KRASIPHCQPALQP
Trigger: GGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGGTCCCAACTGCCTGTAAGTCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR TCA 90 bp ATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGAGAAGATGGAGGCTaGGGAACGATTTCTTGCCCCTGCCAGGAGCCTGCAGGGCGTTTA +
Preference number: 1 (lower is better)
Translates to: IVVRLRVPGKGEDGG*GTISCPCQEPAGRL
Trigger: TAAACGCCCTGCAGGCTCCTGGCAGGGGCAAGAAATCGTTCCTCAGCCTCCATCTTCTCCCTTCCCAGGAACCCTCAGTCTCACGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 90 bp TGTGGCTGGAAAGCACAGAAGCTCACAGTGACAATGACTGCTCAGTaGAAGCCACACTGTGAGCAGGAAAGCTGTCCCAGGCCTGTGCCG +
Preference number: 1 (lower is better)
Translates to: CGWKAQKLTVTMTAQ*KPHCEQESCPRPVP
Trigger: CGGCACAGGCCTGGGACAGCTTTCCTGCTCACAGTGTGGCTTGCACTGAGCAGTCATTGTCACTGTGAGCTTCTGTGCTTTCCAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 90 bp TCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACATCAGATaGATGAGCCACGGGAGACTCAGGGCTTGTGGCTGGAAAGCACAG +
Preference number: 1 (lower is better)
Translates to: SLHARSGDLACQDIR*MSHGRLRACGWKAQ
Trigger: CTGTGCTTTCCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 90 bp TGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACATCAGATGAATaGGCCACGGGAGACTCAGGGCTTGTGGCTGGAAAGCACAGAAGC +
Preference number: 1 (lower is better)
Translates to: CTPGVEIWLVKTSDE*ATGDSGLVAGKHRS
Trigger: GCTTCTGTGCTTTCCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 90 bp CACACACACACACACACACACACACACCCTGCACTTACACCCGCCTaGTCCATGAACACTCCTCAGACCCTTAACACTTCTGTCACCTTC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHPALTPA*SMNTPQTLNTSVTF
Trigger: GAAGGTGACAGAAGTGTTAAGGGTCTGAGGAGTGTTCATGGAGCAGGCGGGTGTAAGTGCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 90 bp CCCCACACAGGAGTTAGGAAGACAACCATGGTCCAGAGTGCACCCTaGGCACTGTCCCCTCTTCAGTGGTTAGCTATATGGGTTGTCATT +
Preference number: 1 (lower is better)
Translates to: PHTGVRKTTMVQSAP*ALSPLQWLAIWVVI
Trigger: AATGACAACCCATATAGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTCTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR CCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTaGGAAGGGAGAAGATGGAGGCTGAGGAACGATTTCTTGCCCCTG +
Preference number: 1 (lower is better)
Translates to: LTTKQLLNSRETEGS*EGRRWRLRNDFLPL
Trigger: CAGGGGCAAGAAATCGTTCCTCAGCCTCCATCTTCTCCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 90 bp TTGTCAAGACATCAGATGAATGAGCCACGGGAGACTCAGGGCTTGTaGCTGGAAAGCACAGAAGCTCACAGTGACAATGACTGCTCAGTG +
Preference number: 1 (lower is better)
Translates to: LSRHQMNEPRETQGL*LESTEAHSDNDCSV
Trigger: CACTGAGCAGTCATTGTCACTGTGAGCTTCTGTGCTTTCCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 90 bp CACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTaGATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGAGAAGATGGA +
Preference number: 1 (lower is better)
Translates to: HLQFVTGLTLQPSNS*IVVRLRVPGKGEDG
Trigger: TCCATCTTCTCCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 90 bp TTTATTAACTTTATTCATATGCATGCGTGTGCCTGTGTAGGGGAATaGGATGTATGTAGACCCCTTGGAGCTGGACTTACAGGCAGTTGG +
Preference number: 1 (lower is better)
Translates to: FINFIHMHACACVGE*DVCRPLGAGLTGSW
Trigger: CCAACTGCCTGTAAGTCCAGCTCCAAGGGGTCTACATACATCTCATTCCCCTACACAGGCACACGCATGCATATGAATAAAGTTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR CCA 90 bp CGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTaGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGAT +
Preference number: 1 (lower is better)
Translates to: RKYTHISAQRSLATI*LFGTVKSVAFIPPD
Trigger: ATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 90 bp CAGAATGGAGAACAACACAGATTCCATGCTCTGCTGCTGGGATCTTaGTTTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTAT +
Preference number: 1 (lower is better)
Translates to: QNGEQHRFHALLLGS*FYLLGNFSNYREAY
Trigger: ATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAAAGCAAGATCCCAGCAGCAGAGCATGGAATCTGTGTTGTTCTCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR GCA 90 bp GGCAGTTTAGACAGAATGGAGAACAACACAGATTCCATGCTCTGCTaGTGGGATCTTGCTTTTATCTTCTTGGCAATTTCTCAAACTATC +
Preference number: 1 (lower is better)
Translates to: GSLDRMENNTDSMLC*WDLAFIFLAISQTI
Trigger: GATAGTTTGAGAAATTGCCAAGAAGATAAAAGCAAGATCCCAGCAGCAGAGCATGGAATCTGTGTTGTTCTCCATTCTGTCTAAACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGGGAGGCAGCTTTGGTaGAGGACGTGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWGRQLW*RTWSPP
Trigger: CGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGGCAAGGTCAGCACCTaGGCCAGCTGCCGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWGKVST*ASCRVS
Trigger: AGACACACGGCAGCTGGCCCAGGTGCTGACCTTGCC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CAA 90 bp GAGGGTTCCTGGGAAGGGAGAAGATGGAGGCTGAGGAACGATTTCTaGCCCCTGCCAGGAGCCTGCAGGGCGTTTACCTGCCTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: EGSWEGRRWRLRNDF*PLPGACRAFTCLWQ
Trigger: TTGCCACAGGCAGGTAAACGCCCTGCAGGCTCCTGGCAGGGGCAAGAAATCGTTCCTCAGCCTCCATCTTCTCCCTTCCCAGGAACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACGGGAGGCAGCTTTGGTaGAGGACGTGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHGRQLW*RTWSPP
Trigger: CGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCC...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp CAGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACCACCCGCCTGCTCCATaGACACTCCTCAGACCCTTA +
Preference number: 2 (lower is better)
Translates to: QACAARMCLGKVLTESSDHPPAP*TLLRPL
Trigger: TAAGGGTCTGAGGAGTGTTCATGGAGCAGGCGGGTG...GTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR GCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCCTGCACCGGCCCGTTaGCCTGGGCGAGGCTGGTTA +
Preference number: 2 (lower is better)
Translates to: PPPESVSSSMHDPGMNENPAPAR*PGRGWL
Trigger: TAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGG...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR GCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCAGGGGCCATGGCCACCTaGACCGGCCCGTTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPGAMAT*TGPLPW
Trigger: CCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR TCA 90 bp AGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACACCCGCCTGCTCCATaGACACTCCTCAGACCCTTA +
Preference number: 2 (lower is better)
Translates to: RPVPPGCAWEKSSQSLLTHPPAP*TLLRPL
Trigger: TAAGGGTCTGAGGAGTGTTCATGGAGCAGGCGGGTG...TGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp TGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTCCCAACCGGCCCGTTGCCCTaGGCGAGGCTGGTTACCACA +
Preference number: 2 (lower is better)
Translates to: CVWSCTLPPTNLGGFLFPTGPLP*ARLVTT
Trigger: TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGT...TGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR CCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACACCACCTCCACAGCCTaGCCATCCATGGTGACTGCG +
Preference number: 2 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGT...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR CCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTGCCCTGGGCGAGGCTaGTTACCACAGTCTGGTACA +
Preference number: 2 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFCPGRG*LPQSGT
Trigger: TGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCA...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR CAA 90 bp CAGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTaGTCAAGACATCAGATGAATGAGCCACGGGAGACTCAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QEGGRVPARQEWRFG*SRHQMNEPRETQGL
Trigger: CAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGGACCACGCTGTGTCCTaGATCTTCCTTCCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVDHAVS*IFLPSV
Trigger: CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTC...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTATCCTGGTGGTCACTaGGGCCATGGCCACCTGCAC +
Preference number: 2 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLYPGGH*GHGHLH
Trigger: GTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATA...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR CCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCCCAGGTGACTGTGTTTaGTCATGTACCCTACCACCC +
Preference number: 2 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFPGDCV*SCTLPP
Trigger: GGGTGGTAGGGTACATGACCAAACACAGTCACCTGG...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGCAAGGTCAGCACCTaGGCCAGCTGCCGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: DLTTKQLLNSRETEGSWEGKVST*ASCRVS
Trigger: AGACACACGGCAGCTGGCCCAGGTGCTGACCTTGCC...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTGGGAGGCAGCTTTGGTaGAGGACGTGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGGRQLW*RTWSPP
Trigger: CGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCC...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp CAGGGTATGAAAGGAGTTCCCCACACAGGAGTTAGGAAGACAACCATGGTCCAGAGAAGAAGCAGAGCCTaGAATGGCAGCGCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: QGMKGVPHTGVRKTTMVQRRSRA*NGSAAV
Trigger: CACTGCAGCGCTGCCATTTCAGGCTCTGCTTCTTCT...CTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGGAACTCCTTTCATACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR-3UTR TCA 90 bp ACAACCATGGTCCAGAGTGCACCCTGGGCACTGTCCCCTCTTCAGTGGTTAGCTAAGAAAGGCAGGATCTaGGAAGATGTAAGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: TTMVQSAPWALSPLQWLAKKGRI*EDVSCQ
Trigger: CTGGCAGCTTACATCTTCTCAGATCCTGCCTTTCTT...AGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTCTGGACCATGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR-3UTR GCA 90 bp AGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACCTGCTGAAATACAGCTaGAGACAGCTGGAGAACACG +
Preference number: 2 (lower is better)
Translates to: RKEEESLHARSGDLACQDLLKYS*RQLENT
Trigger: CGTGTTCTCCAGCTGTCTGCAGCTGTATTTCAGCAG...GTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCACCCACGAATCTGGGTaGGTTCTTGTTCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGTHESG*VLVPTV
Trigger: AACTGTGGGAACAAGAACCCACCCAGATTCGTGGGT...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTCCAGGTGACTGTGTTTaGTCATGTACCCTACCACCC +
Preference number: 2 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSPGDCV*SCTLPP
Trigger: GGGTGGTAGGGTACATGACCAAACACAGTCACCTGG...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GAGTGCACCCTGGGCACTGTCCCCTCTTCAGTGGTTAGCTATATGGGTTGTCATAAGCAGAGCCTGAAATaGCAGCGCTGCAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: ECTLGTVPSSVVSYMGCHKQSLK*QRCSDC
Trigger: ACAGTCACTGCAGCGCTGCCATTTCAGGCTCTGCTT...ATGACAACCCATATAGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR CAA 90 bp GGCTTGTCAAGACATCAGATGAATGAGCCACGGGAGACTCAGGGCTaGTGGCTGGAAAGCACAGAAGCTCACAGTGACAATGACTGCTCA +
Preference number: 2 (lower is better)
Translates to: GLSRHQMNEPRETQG*WLESTEAHSDNDCS
Trigger: TGAGCAGTCATTGTCACTGTGAGCTTCTGTGCTTTCCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGACCCACGAATCTGGGTaGGTTCTTGTTCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: GDCVWSCTLPPTNLGGFLTHESG*VLVPTV
Trigger: AACTGTGGGAACAAGAACCCACCCAGATTCGTGGGT...CAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTGGAGTCTGGCCACAATTTaGCTTTTTGGGACAGTGAAA +
Preference number: 2 (lower is better)
Translates to: VLDLPSFGESSRGLGGHWSLATI*LFGTVK
Trigger: TTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT...CCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTACCCACGAATCTGGGTaGGTTCTTGTTCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: VTVFGHVPYHPRIWVGSCTHESG*VLVPTV
Trigger: AACTGTGGGAACAAGAACCCACCCAGATTCGTGGGT...ACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCTGGTCACTGGGGCCATaGCCACCTGCACCGGCCCGT +
Preference number: 2 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTWSLGP*PPAPAR
Trigger: ACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR TCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGAGACTTAATTCCATTTaGTTGCACCTCTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWRLNSI*LHLCKH
Trigger: ATGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGGGCTTTTTGGGACAGTaGAATCGGTGGCGTTCATTC +
Preference number: 2 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGGFLGQ*NRWRSF
Trigger: GAATGAACGCCACCGATTTCACTGTCCCAAAAAGCC...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTGAATAGTGGGAGGCAGCTTTGGTaGAGGACGTGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: SPSVCNRTDLTTKQLLNSGRQLW*RTWSPP
Trigger: CGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCC...ACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR GCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATGTATACACACATTTCTaGACAAAGAAGTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHVYTHF*TKKSGH
Trigger: GTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATAC...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR GCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATGCCATCCATGGTGACTaGGCTGTCCGATATCCTGGT +
Preference number: 2 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHAIHGD*AVRYPG
Trigger: ACCAGGATATCGGACAGCGCAGTCACCATGGATGGC...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCACAATTTGGCTTTTTaGGACAGTGAAATCGGTGGC +
Preference number: 2 (lower is better)
Translates to: PPPESVSSSMHDPGMNENHNLAF*DSEIGG
Trigger: GCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTG...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTCTGCACAAAGAAGTCTaGCCACAATTTGGCTTTTTG +
Preference number: 2 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSLHKEV*PQFGFL
Trigger: CAAAAAGCCAAATTGTGGCCAGACTTCTTTGTGCAG...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTGAATAGTGGTCTAGGCGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SPSVCNRTDLTTKQLLNSGLGGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCGCCTAGACC...ACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CAA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTaGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGAGAAGATGG +
Preference number: 2 (lower is better)
Translates to: SPSVCNRTDLTTKQL*NSRETEGSWEGRRW
Trigger: CCATCTTCTCCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAGACTTAATTCCATTTaGTTGCACCTCTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVRLNSI*LHLCKH
Trigger: ATGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACAGACTTAATTCCATTTaGTTGCACCTCTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHRLNSI*LHLCKH
Trigger: ATGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR TCA 90 bp CAGGGTATGAAAGGAGTTCCCCACACAGGAGTTAGGAAGACAACCATGGTCCAGTTTCTTTCTTCTCACTaGCGTATTGCAGTGACCTCT +
Preference number: 2 (lower is better)
Translates to: QGMKGVPHTGVRKTTMVQFLSSH*RIAVTS
Trigger: AGAGGTCACTGCAATACGTCAGTGAGAAGAAAGAAA...CTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGGAACTCCTTTCATACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR-3UTR CCA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATACCCACGAATCTGGGTaGGTTCTTGTTCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHTHESG*VLVPTV
Trigger: AACTGTGGGAACAAGAACCCACCCAGATTCGTGGGT...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAACTGCACAAAGAAGTCTaGCCACAATTTGGCTTTTTG +
Preference number: 2 (lower is better)
Translates to: DLTTKQLLNSRETEGSWELHKEV*PQFGFL
Trigger: CAAAAAGCCAAATTGTGGCCAGACTTCTTTGTGCAG...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR GCA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATGTATACACACATTTCTaGACAAAGAAGTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHVYTHF*TKKSGH
Trigger: GTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATAC...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTCACAATTTGGCTTTTTaGGACAGTGAAATCGGTGGC +
Preference number: 2 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFHNLAF*DSEIGG
Trigger: GCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTG...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGCTGCACAAAGAAGTCTaGCCACAATTTGGCTTTTTG +
Preference number: 2 (lower is better)
Translates to: HTRKYTHISAQRSLATIWLHKEV*PQFGFL
Trigger: CAAAAAGCCAAATTGTGGCCAGACTTCTTTGTGCAG...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGCACAATTTGGCTTTTTaGGACAGTGAAATCGGTGGC +
Preference number: 2 (lower is better)
Translates to: FIFLAISQTIGRLISPQRHNLAF*DSEIGG
Trigger: GCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTG...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR-3UTR CCA 90 bp ATTGATATGCAAATTTCCCACCCCTCCCTTATCACATACAGAAAAGAACATACAAGTCTGGCCACAATTTaGCTTTTTGGGACAGTGAAA +
Preference number: 2 (lower is better)
Translates to: IDMQISHPSLITYRKEHTSLATI*LFGTVK
Trigger: TTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT...TGTATGTTCTTTTCTGTATGTGATAAGGGAGGGGTGGGAAATTTGCATATCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR-3UTR GCA 90 bp TCCAACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACAACAACGTAAGCTCTaGCTTGTTGTTTGTACTTCC +
Preference number: 2 (lower is better)
Translates to: SNIVPSDFRNVVKNQTKPQQRKL*LVVCTS
Trigger: GGAAGTACAAACAACAAGGCAGAGCTTACGTTGTTG...TGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR-3UTR TCA 90 bp ATTGATATGCAAATTTCCCACCCCTCCCTTATCACATACAGAAAAGAACATACAAGACTTAATTCCATTTaGTTGCACCTCTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: IDMQISHPSLITYRKEHTRLNSI*LHLCKH
Trigger: ATGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...TGTATGTTCTTTTCTGTATGTGATAAGGGAGGGGTGGGAAATTTGCATATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR CCA 72 bp CTGCGCTGTCCGATATCCTGGTGGTCACTGGGGCCATaGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGC +
Preference number: 3 (lower is better)
Translates to: LRCPISWWSLGP*PPAPARCPGRG
Trigger: GCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR GCA 72 bp TCCGATATCCTGGTGGTCACTGGGGCCATGGCCACCTaGACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACC +
Preference number: 3 (lower is better)
Translates to: SDILVVTGAMAT*TGPLPWARLVT
Trigger: GGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR CCA 72 bp CCCCTGCCAGGAGCCTGCAGGGCGTTTACCTGCCTGTaGCAAGGTCAGCACCTGGGCCAGCTGCCGTGTGTC +
Preference number: 3 (lower is better)
Translates to: PLPGACRAFTCL*QGQHLGQLPCV
Trigger: GACACACGGCAGCTGGCCCAGGTGCTGACCTTGCCACAGGCAGGTAAACGCCCTGCAGGCTCCTGGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp TGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTaGCCTGGGCGAGGCTGGTTACCACAGTCTGGTACA +
Preference number: 3 (lower is better)
Translates to: WSLGPWPPAPAR*PGRGWLPQSGT
Trigger: TGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR CCA 72 bp CATGGTGACTGCGCTGTCCGATATCCTGGTGGTCACTaGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTG +
Preference number: 3 (lower is better)
Translates to: HGDCAVRYPGGH*GHGHLHRPVAL
Trigger: CAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR GCA 72 bp GCAAGGTCAGCACCTGGGCCAGCTGCCGTGTGTCTCTaGTGGCAAAGCGCACATGTGCGCACGCACTCTCTG +
Preference number: 3 (lower is better)
Translates to: ARSAPGPAAVCL*WQSAHVRTHSL
Trigger: CAGAGAGTGCGTGCGCACATGTGCGCTTTGCCAGCAGAGACACACGGCAGCTGGCCCAGGTGCTGACCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 72 bp CCAAGGTCACCACCTCCACAGCCTGGCCATCCATGGTaGCTGCGCTGTCCGATATCCTGGTGGTCACTGGGG +
Preference number: 3 (lower is better)
Translates to: PRSPPPQPGHPW*LRCPISWWSLG
Trigger: CCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR GCA 72 bp GGTCACCACCTCCACAGCCTGGCCATCCATGGTGACTaGGCTGTCCGATATCCTGGTGGTCACTGGGGCCAT +
Preference number: 3 (lower is better)
Translates to: GHHLHSLAIHGD*AVRYPGGHWGH
Trigger: ATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR GCA 72 bp AGGCTGAGGAACGATTTCTTGCCCCTGCCAGGAGCCTaGAGGGCGTTTACCTGCCTGTGGCAAGGTCAGCAC +
Preference number: 3 (lower is better)
Translates to: RLRNDFLPLPGA*RAFTCLWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGGTAAACGCCCTGCAGGCTCCTGGCAGGGGCAAGAAATCGTTCCTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 72 bp CACAGTGACAATGACTGCTCAGTGCAAGCCACACTGTaGGCAGGAAAGCTGTCCCAGGCCTGTGCCGCCAGG +
Preference number: 3 (lower is better)
Translates to: HSDNDCSVQATL*AGKLSQACAAR
Trigger: CCTGGCGGCACAGGCCTGGGACAGCTTTCCTGCTCACAGTGTGGCTTGCACTGAGCAGTCATTGTCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp AGCCACACTGTGAGCAGGAAAGCTGTCCCAGGCCTGTaGCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGA +
Preference number: 3 (lower is better)
Translates to: SHTVSRKAVPGL*RQDVPGKSPHR
Trigger: TCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCTGGGACAGCTTTCCTGCTCACAGTGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp CTGGGCGTGGTAGCGCACGCCTTTAATCACACCACTTaGGAAGCAGAGGCAGGCAGACTTCCGAGTTCGAGG +
Preference number: 3 (lower is better)
Translates to: LGVVAHAFNHTT*EAEAGRLPSSR
Trigger: CCTCGAACTCGGAAGTCTGCCTGCCTCTGCTTCCCAAGTGGTGTGATTAAAGGCGTGCGCTACCACGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115200.8
3UTR CCA 72 bp TCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTaGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCC +
Preference number: 3 (lower is better)
Translates to: SFGESSRGLGGH*EAALVKDVVTS
Trigger: GGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp AGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACACTGGGAGGCAGCTTaGGTGAAGGACGTGGTCACC +
Preference number: 3 (lower is better)
Translates to: RPVPPGCAWEKSSQSLLTHWEAA*VKDVVT
Trigger: GGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTG...TGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp TCCTGTGTGAGGCAGTCTCCTCTGCTGAAATACAGCTaGAGACAGCTGGAGAACACGGTTCCCACGGCGCAC +
Preference number: 3 (lower is better)
Translates to: SCVRQSPLLKYS*RQLENTVPTAH
Trigger: GTGCGCCGTGGGAACCGTGTTCTCCAGCTGTCTGCAGCTGTATTTCAGCAGAGGAGACTGCCTCACACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp CCATGCTACTGTTCCAAGGTCACCACCTCCACAGCCTaGCCATCCATGGTGACTGCGCTGTCCGATATCCTG +
Preference number: 3 (lower is better)
Translates to: PCYCSKVTTSTA*PSMVTALSDIL
Trigger: CAGGATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACCTTGGAACAGTAGCATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR CCA 72 bp ACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTaGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGG +
Preference number: 3 (lower is better)
Translates to: THSLSLDFTSTL*TTLCPGSSFLR
Trigger: CCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp GAAAGCTGTCCCAGGCCTGTGCCGCCAGGATGTGCCTaGGAAAAGTCCTCACAGAGTCTTCTGACACATCTG +
Preference number: 3 (lower is better)
Translates to: ESCPRPVPPGCA*EKSSQSLLTHL
Trigger: CAGATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCTGGGACAGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp AAGGAGTTCCCCACACAGGAGTTAGGAAGACAACCATaGTCCAGAGTGCACCCTGGGCACTGTCCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: KEFPTQELGRQP*SRVHPGHCPLF
Trigger: GAAGAGGGGACAGTGCCCAGGGTGCACTCTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGGAACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR TCA 72 bp GCCAGGAGTGGAGATTTGGCTTGTCAAGACATCAGATaGATGAGCCACGGGAGACTCAGGGCTTGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: ARSGDLACQDIR*MSHGRLRACGW
Trigger: CCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp GGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTaGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: GLHKHSLDHAVS*IFLPSVNLAEV
Trigger: GACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp GGAGTTAGGAAGACAACCATGGTCCAGAGTGCACCCTaGGCACTGTCCCCTCTTCAGTGGTTAGCTATATGG +
Preference number: 3 (lower is better)
Translates to: GVRKTTMVQSAP*ALSPLQWLAIW
Trigger: CCATATAGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTCTGGACCATGGTTGTCTTCCTAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
3UTR-3UTR CAA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACAATCTGGGTGGGTTCTaGTTCCCACAGTTCACCTTG +
Preference number: 3 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHNLGGF*FPQFTL
Trigger: CAAGGTGAACTGTGGGAACAAGAACCCACCCAGATT...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp CAGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACTCCCTCCTTCCTATTTaGCTCTCCTATAATCTTCCC +
Preference number: 3 (lower is better)
Translates to: QACAARMCLGKVLTESSDSLLPI*LSYNLP
Trigger: GGGAAGATTATAGGAGAGCAAAATAGGAAGGAGGGA...GTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp GACCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAACGTAAGCTCTGCCTaGTTGTTTGTACTTCCCAGC +
Preference number: 3 (lower is better)
Translates to: DRPHMGFLKEGEHSTLPTNVSSA*LFVLPS
Trigger: GCTGGGAAGTACAAACAACAAGGCAGAGCTTACGTT...GGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR TCA 72 bp GGAGTGGAGATTTGGCTTGTCAAGACATCAGATGAATaGGCCACGGGAGACTCAGGGCTTGTGGCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: GVEIWLVKTSDE*ATGDSGLVAGK
Trigger: CTTTCCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp ACACACACACACACACACCCTGCACTTACACCCGCCTaGTCCATGAACACTCCTCAGACCCTTAACACTTCT +
Preference number: 3 (lower is better)
Translates to: THTHTHPALTPA*SMNTPQTLNTS
Trigger: AGAAGTGTTAAGGGTCTGAGGAGTGTTCATGGAGCAGGCGGGTGTAAGTGCAGGGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp ACTCATACACACACACACACACACACACACACACCCTaGACTTACACCCGCCTGCTCCATGAACACTCCTCA +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHTP*TYTRLLHEHSS
Trigger: TGAGGAGTGTTCATGGAGCAGGCGGGTGTAAGTGCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp AAAGCACAGAAGCTCACAGTGACAATGACTGCTCAGTaGAAGCCACACTGTGAGCAGGAAAGCTGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: KAQKLTVTMTAQ*KPHCEQESCPR
Trigger: CCTGGGACAGCTTTCCTGCTCACAGTGTGGCTTGCACTGAGCAGTCATTGTCACTGTGAGCTTCTGTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp CATCAGATGAATGAGCCACGGGAGACTCAGGGCTTGTaGCTGGAAAGCACAGAAGCTCACAGTGACAATGAC +
Preference number: 3 (lower is better)
Translates to: HQMNEPRETQGL*LESTEAHSDND
Trigger: GTCATTGTCACTGTGAGCTTCTGTGCTTTCCAGCCACAAGCCCTGAGTCTCCCGTGGCTCATTCATCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp TGGCAGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTaGAGATTTGGCTTGTCAAGACATCAGATGAATGAG +
Preference number: 3 (lower is better)
Translates to: WQEGGRVPARQE*RFGLSRHQMNE
Trigger: CTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp CTGAAATACAGCTGCAGACAGCTGGAGAACACGGTTCCCACGGCGCACCCTGATACAACCAAGCAACTCTaGAATAGTCGTGAGACTGAG +
Preference number: 3 (lower is better)
Translates to: LKYSCRQLENTVPTAHPDTTKQL*NSRETE
Trigger: CTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGT...ATCAGGGTGCGCCGTGGGAACCGTGTTCTCCAGCTGTCTGCAGCTGTATTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCACCTGCACCGGCCCGTaGCCCTGGGCGAGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTTCTGP*PWARLV
Trigger: AACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
3UTR-3UTR CAA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACAAGTCTGGCCACAATTaGGCTTTTTGGGACAGTGAA +
Preference number: 3 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHKSGHN*AFWDSE
Trigger: TTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTT...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp GGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGAAGTCTGGCCACAATTaGGCTTTTTGGGACAGTGAA +
Preference number: 3 (lower is better)
Translates to: GDCVWSCTLPPTNLGGFLKSGHN*AFWDSE
Trigger: TTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTT...CAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 72 bp CAGACAGCTGGAGAACACGGTTCCCACGGCGCACCCTaGTTTATGAAGAGTTTTCTCCCTCCTTCCTATTTT +
Preference number: 3 (lower is better)
Translates to: QTAGEHGSHGAP*FMKSFLPPSYF
Trigger: AAAATAGGAAGGAGGGAGAAAACTCTTCATAAATCAGGGTGCGCCGTGGGAACCGTGTTCTCCAGCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp AAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTaGGAAGGGAGAAGATGGAGGCTGAGGAACGATTTC +
Preference number: 3 (lower is better)
Translates to: KQLLNSRETEGS*EGRRWRLRNDF
Trigger: GAAATCGTTCCTCAGCCTCCATCTTCTCCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACAAGTCTGGCCACAATTaGGCTTTTTGGGACAGTGAA +
Preference number: 3 (lower is better)
Translates to: PPPESVSSSMHDPGMNENKSGHN*AFWDSE
Trigger: TTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CCA 72 bp TGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTaGGTTCTTGTTCCCACAGTTCACCTTGATTTCATA +
Preference number: 3 (lower is better)
Translates to: CLVMYPTTHESG*VLVPTVHLDFI
Trigger: TATGAAATCAAGGTGAACTGTGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR TCA 72 bp TTTATTCATATGCATGCGTGTGCCTGTGTAGGGGAATaGGATGTATGTAGACCCCTTGGAGCTGGACTTACA +
Preference number: 3 (lower is better)
Translates to: FIHMHACACVGE*DVCRPLGAGLT
Trigger: TGTAAGTCCAGCTCCAAGGGGTCTACATACATCTCATTCCCCTACACAGGCACACGCATGCATATGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR CCA 72 bp ACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTaGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATT +
Preference number: 3 (lower is better)
Translates to: THISAQRSLATI*LFGTVKSVAFI
Trigger: AATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp GACAGAATGGAGAACAACACAGATTCCATGCTCTGCTaGTGGGATCTTGCTTTTATCTTCTTGGCAATTTCT +
Preference number: 3 (lower is better)
Translates to: DRMENNTDSMLC*WDLAFIFLAIS
Trigger: AGAAATTGCCAAGAAGATAAAAGCAAGATCCCAGCAGCAGAGCATGGAATCTGTGTTGTTCTCCATTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTGAATAGTAAGTCTGGCCACAATTaGGCTTTTTGGGACAGTGAA +
Preference number: 3 (lower is better)
Translates to: SPSVCNRTDLTTKQLLNSKSGHN*AFWDSE
Trigger: TTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTT...ACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR GCA 72 bp TTAGACAGAATGGAGAACAACACAGATTCCATGCTCTaGTGCTGGGATCTTGCTTTTATCTTCTTGGCAATT +
Preference number: 3 (lower is better)
Translates to: LDRMENNTDSML*CWDLAFIFLAI
Trigger: AATTGCCAAGAAGATAAAAGCAAGATCCCAGCAGCAGAGCATGGAATCTGTGTTGTTCTCCATTCTGTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
3UTR-3UTR CAA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGTGTAGAACCAGGACATaGATATGCAAATTTCCCACC +
Preference number: 3 (lower is better)
Translates to: FIFLAISQTIGRLISPQRCRTRT*ICKFPT
Trigger: GGTGGGAAATTTGCATATCAATGTCCTGGTTCTACA...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACATGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: GAMATCTGPLPWARLVTTCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR GCA 90 bp TGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: WSLGPWPPAPARCPGRGWLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...CCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CCA 90 bp GGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: GAMATCTGPLPWARLVTTMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CCA 90 bp GGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GHWGHGHLHRPVALGEAGRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...ACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR TCA 90 bp ACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TCTGPLPWARLVTTVWYMCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...CATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR TCA 90 bp ACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: TCTGPLPWARLVTTVWYMPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...CATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR GCA 90 bp GGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACACATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GAMATCTGPLPWARLVTTHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CCA 90 bp ACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TCTGPLPWARLVTTVWYMPHLVR*LPPEWR
Trigger: TCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGG...CATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR TCA 90 bp TGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTAGACTCAAACACATaGGGCCGTTTCCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WSLGPWPPAPARCPGRGWLDSNT*GRFRFF
Trigger: GAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAA...CCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR TCA 90 bp TGGCCATCCATGGTGACTGCGCTGTCCGATATCCTGGTGGTCACTGGGGCCATGCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: WPSMVTALSDILVVTGAMRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...CATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR GCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCACGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSRRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GHWGHGHLHRPVALGEAGILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...ACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTACCGGCCCGTTGCCCTaGGCGAGGCTGGTTACCACA +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVATGPLP*ARLVTT
Trigger: TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGT...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GACCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DRPHMGFLKEGEHSTLPTCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...GGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGCGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWRRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CAGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: QACAARMCLGKVLTESSDCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...GTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCACCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSPHLVR*LPPEWR
Trigger: TCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGG...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATTGGTCACTGGGGCCATaGCCACCTGCACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHWSLGP*PPAPAR
Trigger: ACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp ACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: TCTGPLPWARLVTTVWYMVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...CATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR TCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACAAAGGACTCAGGCTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRIAILSARDKLFTKDSGCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...GCCTGAGTCCTTTGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR TCA 90 bp GACCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: DRPHMGFLKEGEHSTLPTPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...GGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp CTGAAATACAGCTGCAGACAGCTGGAGAACACGGTTCCCACGGCGCACCCTGATCGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: LKYSCRQLENTVPTAHPDRRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...ATCAGGGTGCGCCGTGGGAACCGTGTTCTCCAGCTGTCTGCAGCTGTATTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGAGTTCCCCACACAGGAGTTAGGAAGACAACCATGGTCCAGAGTGCACCCTGGTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: GVPHTGVRKTTMVQSAPWCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...CCAGGGTGCACTCTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGGAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVAMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCTGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RKEEESLHARSGDLACQDRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: RKEEESLHARSGDLACQDPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...GTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCCCACGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GFLKEGEHSTLPTSSATPRRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...TGGGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp ACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: TCTGPLPWARLVTTVWYMQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...CATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR GCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGCCTGCACCGGCCCGTTaGCCTGGGCGAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVPAPAR*PGRGWL
Trigger: TAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGG...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGGCCATGGCCACCTaGACCGGCCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWEGAMAT*TGPLPW
Trigger: CCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TCCGATATCCTGGTGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SDILVVTGAMATCTGPLPLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...GGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp CAAGGTCACCACCTCCACAGCCTGGCCATCCATGGTGACTGCGCTGTCCGATATAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: QGHHLHSLAIHGDCAVRYSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...ATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACCTTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCTGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTACCGGCCCGTTGCCCTaGGCGAGGCTGGTTACCACA +
Preference number: 4 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSTGPLP*ARLVTT
Trigger: TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGT...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTGGTCACTGGGGCCATaGCCACCTGCACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLWSLGP*PPAPAR
Trigger: ACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCATGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HGFSERGRAFHTANQLCNRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp GGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: GDCVWSCTLPPTNLGGFLRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...CAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSGEARVPSNTHLFSSASCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGCAGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAACATTCCCACAGGACCTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GRKEEESLHARSGDLACQHSHRT*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGAATG...TTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATGGGGCCATGGCCACCTaGACCGGCCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHGAMAT*TGPLPW
Trigger: CCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCATGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVADACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTGAAATACAGCTGCAGACAGCTGGAGAACACGGTTCCCACGGCGCACCCTGATAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: LKYSCRQLENTVPTAHPDSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...ATCAGGGTGCGCCGTGGGAACCGTGTTCTCCAGCTGTCTGCAGCTGTATTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCTGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFPHLVR*LPPEWR
Trigger: TCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGG...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACAAAGGACTCAGGCCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PRIAILSARDKLFTKDSGPHLVR*LPPEWR
Trigger: TCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGG...GCCTGAGTCCTTTGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGTATCCTGGTGGTCACTaGGGCCATGGCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVYPGGH*GHGHLH
Trigger: GTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATA...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGACCACCTCCACAGCCTaGCCATCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGT...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQECGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCACCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSGEARVPSNTHLFSSASPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GCTGCCAGAACCAAGCCAACCCAGCAACGCATACTTTCTTTCTTCTCACTGACGCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AARTKPTQQRILSFFSLTPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...CGTCAGTGAGAAGAAAGAAAGTATGCGTTGCTGGGTTGGCTTGGTTCTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR GCA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGCGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRRRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGCGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVRRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCCTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCACAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVAVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSKCSDG*CGFPRQ
Trigger: CTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAACCTGCACCGGCCCGTTaGCCTGGGCGAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWEPAPAR*PGRGWL
Trigger: TAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGG...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTAAAACCTGCACCGGCCCGTTaGCCTGGGCGAGGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: DSEIGGVHSTRSQSGALKPAPAR*PGRGWL
Trigger: TAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGG...TTTTAAAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCCTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQPAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGG...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GACCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: DRPHMGFLKEGEHSTLPTHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...GGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRLASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: RKEEESLHARSGDLACQDRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...GTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGTGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGTGCCCTGGGCGAGGCTaGTTACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMCPGRG*LPQSGT
Trigger: TGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCA...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVAINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTGGTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: VLDLPSFGESSRGLGGHWCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...CCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQEPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGAAAGCAGGGGCTGCCTaGGGTAGCAGGAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKKAGAA*GSRSQQ
Trigger: CTGTTGGCTCCTGCTACCTCAGGCAGCCCCTGCTTT...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAAAGCAGGGGCTGCCTaGGGTAGCAGGAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSKAGAA*GSRSQQ
Trigger: CTGTTGGCTCCTGCTACCTCAGGCAGCCCCTGCTTT...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTGCGAGGCCCTGGGTTTaGTCCCCAGCACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVARPWV*SPALQQ
Trigger: CTGCTGCAGTGCTGGGGATCAAACCCAGGGCCTCGC...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115199.8
CDS-3UTR GCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHDLLGH*MGFYGS
Trigger: GCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTC...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TGGCCATCCATGGTGACTGCGCTGTCCGATATCCTGGTGGTCACTGGGGCCATGCACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: WPSMVTALSDILVVTGAMHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...CATGGCCCCAGTGACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR GCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGCGCAGGGGCGTGTTCTaGCAGAGCAGACTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQERRGVF*QSRLEV
Trigger: GACCTCGAGTCTGCTCTGGCAGAACACGCCCCTGCG...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCCTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVAQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSKCSDG*CGFPRQ
Trigger: CTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TACAAAGGACTCAGGCCATCCATAGAAGAAGCAGAGCCTGAAATGGCAGCGCTGAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: YKGLRPSIEEAEPEMAALKCSDG*CGFPRQ
Trigger: CTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...CAGCGCTGCCATTTCAGGCTCTGCTTCTTCTATGGATGGCCTGAGTCCTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR GCA 90 bp AGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACGCCATCCATGGTGACTaGGCTGTCCGATATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RKEEESLHARSGDLACQDAIHGD*AVRYPG
Trigger: ACCAGGATATCGGACAGCGCAGTCACCATGGATGGC...GTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGGCCATCCATGGTGACTaGGCTGTCCGATATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVAIHGD*AVRYPG
Trigger: ACCAGGATATCGGACAGCGCAGTCACCATGGATGGC...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCCCTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFPAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGG...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTCCCAATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: CVWSCTLPPTNLGGFLFPMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...TGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGGGTCAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: EGQQLSGEARVPSNTHLFSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...AAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GAGTGCACCCTGGGCACTGTCCCCTCTTCAGTGGTTAGCTATATGGGTTGTCATAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: ECTLGTVPSSVVSYMGCHSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...ATGACAACCCATATAGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCATGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTTGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCAACCGGCCCGTTGCCCTaGGCGAGGCTGGTTACCACA +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPTGPLP*ARLVTT
Trigger: TGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGT...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTTGGTCACTGGGGCCATaGCCACCTGCACCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGWSLGP*PPAPAR
Trigger: ACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCA...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACACCACCTCCACAGCCTaGCCATCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVALYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGTGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCCCATGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: GFLKEGEHSTLPTSSATPCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...TGGGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTGCGGCTTCTGCCAGTaGTGCTACCGCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHCGFCQ*CYRLGG
Trigger: GCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCA...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAGGGTCAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: EGQQLSGEARVPSNTHLFDLLGH*MGFYGS
Trigger: GCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTC...AAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCCATTCCCACAGGACCTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSHSHRT*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGAATG...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCATTCCCACAGGACCTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENHSHRT*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGAATG...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTCATTCCCACAGGACCTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VTVFGHVPYHPRIWVGSCHSHRT*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGAATG...ACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGTTTGGAGGGTGAGATaGAGAGTACAATCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWVWRVR*RVQSLA
Trigger: AGCAAGCGATTGTACTCTGCATCTCACCCTCCAAAC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CAAGGTCACCACCTCCACAGCCTGGCCATCCATGGTGACTGCGCTGTCCGATATATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: QGHHLHSLAIHGDCAVRYILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...ATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGTGACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR GCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCCACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATCCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTCCCAGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: CVWSCTLPPTNLGGFLFPATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...TGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GGCAGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAACCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRKEEESLHARSGDLACQPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...TTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTGGAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: VLDLPSFGESSRGLGGHWKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...CCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGLASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTGACCAGTCACTTTCTCTGTCTCTCGCATCTGAACTATCCTCGCATAGCCATCATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: VTSHFLCLSHLNYPRIAIMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...GATGGCTATGCGAGGATAGTTCAGATGCGAGAGACAGAGAAAGTGACTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAGGGTATGAAAGGAGTTCCCCACACAGGAGTTAGGAAGACAACCATGGTCCAGAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: QGMKGVPHTGVRKTTMVQRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...CTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGGAACTCCTTTCATACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp CAGAACCAAGCCAACCCAGCAACGCATACTTTCTTTCTTCTCACTGACGTATTGTGGCTTCCGCCAGAGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QNQANPATHTFFLLTDVLWLPPE*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCA...CAATACGTCAGTGAGAAGAAAGAAAGTATGCGTTGCTGGGTTGGCTTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQEPHLVR*LPPEWR
Trigger: TCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGG...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGACTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGTAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGT...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115199.8
CDS-3UTR CCA 90 bp GTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTGCCCTGGGCGAGGCTaGTTACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VTVFGHVPYHPRIWVGSCCPGRG*LPQSGT
Trigger: TGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCA...ACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
3UTR CAA 72 bp GGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTaGTCAAGACATCAGATGAATGAGCCACGGGAGACT +
Preference number: 4 (lower is better)
Translates to: GRVPARQEWRFG*SRHQMNEPRET
Trigger: AGTCTCCCGTGGCTCATTCATCTGATGTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTTTAGACTCAAACACATaGGGCCGTTTCCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVALDSNT*GRFRFF
Trigger: GAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAA...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: HGFSERGRAFHTANQLCNVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp TGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTCCCACTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CVWSCTLPPTNLGGFLFPLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...TGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: RPVPPGCAWEKSSQSLLTLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...TGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSQEKHGYLATLICLAPCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CAGAACCAAGCCAACCCAGCAACGCATACTTTCTTTCTTCTCACTGACGTATTGCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: QNQANPATHTFFLLTDVLRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...CAATACGTCAGTGAGAAGAAAGAAAGTATGCGTTGCTGGGTTGGCTTGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR TCA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGTGGTCTTGGAGGCCATaGTTTCTGGAAGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRWSWRP*FLEAQG
Trigger: CCCCTGTGCTTCCAGAAATCATGGCCTCCAAGACCA...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSDLLGH*MGFYGS
Trigger: GCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTC...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGTTTGATCCCCAGCACTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRFDPQH*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGTGCTGGGGATCAAA...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115199.8
CDS-3UTR GCA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGACAGGACCTAGTATATaGGAGGCCCTGGGTTTGATC +
Preference number: 4 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGTGPSI*EALGLI
Trigger: GATCAAACCCAGGGCCTCGCATATACTAGGTCCTGT...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115199.8
CDS-3UTR CCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTGCCATGTGTTCAGTTTaGGTCACTCCGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSAMCSV*VTPCSS
Trigger: GGAGGAGCACGGAGTGACCCAAACTGAACACATGGC...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGGCCATGTGTTCAGTTTaGGTCACTCCGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKAMCSV*VTPCSS
Trigger: GGAGGAGCACGGAGTGACCCAAACTGAACACATGGC...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGCCATGTGTTCAGTTTaGGTCACTCCGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVAMCSV*VTPCSS
Trigger: GGAGGAGCACGGAGTGACCCAAACTGAACACATGGC...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: LSGEARVPSNTHLFSSASCWATA*ASMVAM
Trigger: CATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCA...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTCCCATGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: CVWSCTLPPTNLGGFLFPCWATA*ASMVAM
Trigger: CATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCA...TGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGTGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVCWATA*ASMVAM
Trigger: CATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCA...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACTGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENCWATA*ASMVAM
Trigger: CATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCA...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCCTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSPAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGG...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: MCARTLCPWTSQALSGPRLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCCCAAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GFLKEGEHSTLPTSSATPKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...TGGGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AGGAAGGAGGAAGAGTCCCTGCACGCCAGGAGTGGAGATTTGGCTTGTCAAGACAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: RKEEESLHARSGDLACQDKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...GTCTTGACAAGCCAAATCTCCACTCCTGGCGTGCAGGGACTCTTCCTCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TTGAAATGCTCCAACGATGCCTGTAGGGCCGAAACCCCATATCAGGGTCTAGTGCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LKCSNDACRAETPYQGLVHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...CACTAGACCCTGATATGGGGTTTCGGCCCTACAGGCATCGTTGGAGCATTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TACAAAGGACTCAGGCCATCCATAGAAGAAGCAGAGCCTGAAATGGCAGCGCTGGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: YKGLRPSIEEAEPEMAALDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...CAGCGCTGCCATTTCAGGCTCTGCTTCTTCTATGGATGGCCTGAGTCCTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVMLPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCAT...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGATGCTCACAGGGATCTaGACCAGGCCATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMMLTGI*TRPLAS
Trigger: AGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCAT...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCATGCTCACAGGGATCTaGACCAGGCCATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFMLTGI*TRPLAS
Trigger: AGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCAT...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATCTGGTTACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHLVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTAACCAG...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTTATCCTGGTGGTCACTaGGGCCATGGCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTYPGGH*GHGHLH
Trigger: GTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATA...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAATATCCTGGTGGTCACTaGGGCCATGGCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWEYPGGH*GHGHLH
Trigger: GTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATA...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp ATTCCACACTGCCAACCAGCTCTGCAACCCCAAACTCTTTCAAAAGTAAACCAGGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: IPHCQPALQPQTLSKVNQERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...CTGGTTTACTTTTGAAAGAGTTTGGGGTTGCAGAGCTGGTTGGCAGTGTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHERRQL*INLLWR
Trigger: GCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTC...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCCCACTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: GFLKEGEHSTLPTSSATPLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...TGGGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACTGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGDLLGH*MGFYGS
Trigger: GCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTC...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCCCAGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: GFLKEGEHSTLPTSSATPGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...TGGGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp CAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATGCCTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QTKPPTPQSRPKPKPYICLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...GCATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCACTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHKCSDG*CGFPRQ
Trigger: CTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACTTTGCTGATGGTCCATaGATGAACTCCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HGFSERGRAFHTANQLCNFADGP*MNSIWA
Trigger: GGCCCAGATGGAGTTCATGCATGGACCATCAGCAAA...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp ATTGATATGCAAATTTCCCACCCCTCCCTTATCACATACAGAAAAGAACATACAGGGGCCATGGCCACCTaGACCGGCCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IDMQISHPSLITYRKEHTGAMAT*TGPLPW
Trigger: CCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCC...TGTATGTTCTTTTCTGTATGTGATAAGGGAGGGGTGGGAAATTTGCATATCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VTVFGHVPYHPRIWVGSCCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...ACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACAATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RPVPPGCAWEKSSQSLLTILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...TGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SSSQEKHGYLATLICLAPPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PASHGFSERGRAFHTANQLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp GGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GDCVWSCTLPPTNLGGFLELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...CAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSLASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TTGAAATGCTCCAACGATGCCTGTAGGGCCGAAACCCCATATCAGGGTCTAGTGCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LKCSNDACRAETPYQGLVLASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...CACTAGACCCTGATATGGGGTTTCGGCCCTACAGGCATCGTTGGAGCATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQEDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHPHLVR*LPPEWR
Trigger: TCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGG...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTTGCCCTGGGCGAGGCTaGTTACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTCPGRG*LPQSGT
Trigger: TGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCA...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCACTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CATCTGAACTATCCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACATGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: HLNYPRIAILSARDKLFTCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...TGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGGATAGTTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR TCA 90 bp CATCTGAACTATCCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACATGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: HLNYPRIAILSARDKLFTCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...TGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGGATAGTTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR TCA 90 bp ACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATATCTTTCCTGCAGCCTaGGGAGCCGTCACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TKPNHLPHSQDQSPNHTYIFPAA*GAVTAL
Trigger: CAAAGCCGTGACGGCTCCTCAGGCTGCAGGAAAGAT...ATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp ACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATCATTCCCACAGGACCTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TKPNHLPHSQDQSPNHTYHSHRT*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGAATG...ATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATCATTCCCACAGGACCTaGAGCAGCCAGATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHHSHRT*SSQMGS
Trigger: ACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGAATG...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMRSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: HGFSERGRAFHTANQLCNILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAGGGTCAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: EGQQLSGEARVPSNTHLFVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...AAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTGACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TTGAAATGCTCCAACGATGCCTGTAGGGCCGAAACCCCATATCAGGGTCTAGTGCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: LKCSNDACRAETPYQGLVQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...CACTAGACCCTGATATGGGGTTTCGGCCCTACAGGCATCGTTGGAGCATTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR GCA 90 bp CATCTGAACTATCCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACAGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: HLNYPRIAILSARDKLFTVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...TGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGGATAGTTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR GCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGTCTCTCCCACAAGAGTaGCTGTATCCTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRSLPQE*LYPLVL
Trigger: CAAGACCAGAGGATACAGGCACTCTTGTGGGAGAGA...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGTCTCTCCCACAAGAGTaGCTGTATCCTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKSLPQE*LYPLVL
Trigger: CAAGACCAGAGGATACAGGCACTCTTGTGGGAGAGA...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTAAAAGCCATCCATGGTGACTaGGCTGTCCGATATCCTGGT +
Preference number: 4 (lower is better)
Translates to: DSEIGGVHSTRSQSGALKAIHGD*AVRYPG
Trigger: ACCAGGATATCGGACAGCGCAGTCACCATGGATGGC...TTTTAAAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GTAGTTAAGAACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAAACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVKNQTKPPTPQSRPKPKTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...TTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGTTCTTAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp GTAGTTAAGAACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAAGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: VVKNQTKPPTPQSRPKPKATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...TTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGTTCTTAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTCCTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTPAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGG...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTAAAACCTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: DSEIGGVHSTRSQSGALKPAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGG...TTTTAAAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCTTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCAGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSGEARVPSNTHLFSSASELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCTGCCAGAACCAAGCCAACCCAGCAACGCATACTTTCTTTCTTCTCACTGACGGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: AARTKPTQQRILSFFSLTELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...CGTCAGTGAGAAGAAAGAAAGTATGCGTTGCTGGGTTGGCTTGGTTCTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGTTCCCAAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: CVWSCTLPPTNLGGFLFPKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...TGGGAACAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTAAAAGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: DSEIGGVHSTRSQSGALKDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...TTTTAAAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACATGCTCACAGGGATCTaGACCAGGCCATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENMLTGI*TRPLAS
Trigger: AGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCAT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGCTGGTTACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVLVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTAACCAG...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTCTGGTTACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLLVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTAACCAG...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACTTAGACTCAAACACATaGGGCCGTTTCCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HGFSERGRAFHTANQLCNLDSNT*GRFRFF
Trigger: GAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAA...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp TTGAAATGCTCCAACGATGCCTGTAGGGCCGAAACCCCATATCAGGGTCTAGTGTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LKCSNDACRAETPYQGLVCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...CACTAGACCCTGATATGGGGTTTCGGCCCTACAGGCATCGTTGGAGCATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR TCA 90 bp GCTGCCAGAACCAAGCCAACCCAGCAACGCATACTTTCTTTCTTCTCACTGACGCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: AARTKPTQQRILSFFSLTLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...CGTCAGTGAGAAGAAAGAAAGTATGCGTTGCTGGGTTGGCTTGGTTCTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR TCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFPCCIS*EAATAA
Trigger: AGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: GDCVWSCTLPPTNLGGFLRSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...CAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCGTTTGGAGGGTGAGATaGAGAGTACAATCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSVWRVR*RVQSLA
Trigger: AGCAAGCGATTGTACTCTGCATCTCACCCTCCAAAC...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGTTTGGAGGGTGAGATaGAGAGTACAATCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVVWRVR*RVQSLA
Trigger: AGCAAGCGATTGTACTCTGCATCTCACCCTCCAAAC...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCACACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSGEARVPSNTHLFSSASHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCACATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACACATGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: PVPPGCAWEKSSQSLLTHETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...ATGTGTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTGAATAGTTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: SPSVCNRTDLTTKQLLNSCSDGC*GFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...ACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: HTRKYTHISAQRSLATIWKCSDG*CGFPRQ
Trigger: CTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCAAAACCAGTCATTGTGACCAGTCACTTTCTCTGTCTCTCGCATCTGAACTATTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PKPVIVTSHFLCLSHLNYLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...ATAGTTCAGATGCGAGAGACAGAGAAAGTGACTGGTCACAATGACTGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp ATTCCACACTGCCAACCAGCTCTGCAACCCCAAACTCTTTCAAAAGTAAACCAGTGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: IPHCQPALQPQTLSKVNQCWATA*ASMVAM
Trigger: CATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCA...CTGGTTTACTTTTGAAAGAGTTTGGGGTTGCAGAGCTGGTTGGCAGTGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTTCTCTTTCGGATAGATaGATTAGACTCAAACACATG +
Preference number: 4 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVASLSDR*IRLKHM
Trigger: CATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGA...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGTTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GAGGGTCAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EGQQLSGEARVPSNTHLFILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...AAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTGACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQEKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTGACCAGTCACTTTCTCTGTCTCTCGCATCTGAACTATCCTCGCATAGCCATCAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: VTSHFLCLSHLNYPRIAIKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...GATGGCTATGCGAGGATAGTTCAGATGCGAGAGACAGAGAAAGTGACTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAACTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWELASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSRSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLRSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQEVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFKCSDG*CGFPRQ
Trigger: CTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGC...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PPPESVSSSMHDPGMNENILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GCTGCCAGAACCAAGCCAACCCAGCAACGCATACTTTCTTTCTTCTCACTGACGCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: AARTKPTQQRILSFFSLTLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...CGTCAGTGAGAAGAAAGAAAGTATGCGTTGCTGGGTTGGCTTGGTTCTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CCA 90 bp GTAGTTAAGAACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: VVKNQTKPPTPQSRPKPKLASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...TTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGTTCTTAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR CAA 72 bp GTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTaGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VCNRTDLTTKQL*NSRETEGSWEG
Trigger: CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp ACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TKPNHLPHSQDQSPNHTYINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...ATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCTCAGCTTCGGGCATTTAT...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTCACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWEGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTCTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCAGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: LSGEARVPSNTHLFSSASETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGGCCATGTGTTCAGTTTaGGTCACTCCGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HTRKYTHISAQRSLATIWAMCSV*VTPCSS
Trigger: GGAGGAGCACGGAGTGACCCAAACTGAACACATGGC...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GTAGTTAAGAACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VVKNQTKPPTPQSRPKPKPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...TTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGTTCTTAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCAATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCACCACCTCCACAGCCTaGCCATCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGATGGCCAGGCTGTGGAGGTGGT...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTTTAGACTCAAACACATaGGGCCGTTTCCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVLDSNT*GRFRFF
Trigger: GAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAA...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGGTTGGGTTTGGAGGGTaGGATGCAGAGTACAATCGC +
Preference number: 4 (lower is better)
Translates to: HTRKYTHISAQRSLATIWVGFGG*DAEYNR
Trigger: GCGATTGTACTCTGCATCTCACCCTCCAAACCCAAC...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp CCAAACATCAACATTCAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCTGGTCTTGGAGGCCATaGTTTCTGGAAGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PNINIQSRQTQKYCLLQSWSWRP*FLEAQG
Trigger: CCCCTGTGCTTCCAGAAATCATGGCCTCCAAGACCA...GCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTGAATGTTGATGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAACGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWERSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTCATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCTGTGCGGACATCACTaGGGACATTGGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFLCGHH*GHWPMG
Trigger: TCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAG...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp ATTCCACACTGCCAACCAGCTCTGCAACCCCAAACTCTTTCAAAAGTAAACCAGGTTTTTGCTCTTCTGTaGGGACATCACTGCGGACAT +
Preference number: 4 (lower is better)
Translates to: IPHCQPALQPQTLSKVNQVFALL*GHHCGH
Trigger: ATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAAC...CTGGTTTACTTTTGAAAGAGTTTGGGGTTGCAGAGCTGGTTGGCAGTGTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FIFLAISQTIGRLISPQRTCWTC*ATAWAS
Trigger: AGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGT...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GAGGGTCAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTTCTCTTTCGGATAGATaGATTAGACTCAAACACATG +
Preference number: 4 (lower is better)
Translates to: EGQQLSGEARVPSNTHLFSLSDR*IRLKHM
Trigger: CATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGA...AAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTGACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTAGTTAAGAACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAATTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: VVKNQTKPPTPQSRPKPKFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...TTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGTTCTTAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATTTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GACCTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAACTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: DLTTKQLLNSRETEGSWELYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...TTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HTRKYTHISAQRSLATIWLASSG*SFHRPV
Trigger: TACAGGGCGGTGAAATGACCATCCAGACGACGCAAG...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: FIFLAISQTIGRLISPQRRVATA*AAASLL
Trigger: CAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCT...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFLRQTP*RQGWVW
Trigger: CCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAG...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp ACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: TKPNHLPHSQDQSPNHTYRSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...ATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTCATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCTTGTTGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: EKHGYLATLICLAPLHLVETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...AACAAGATGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTCCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCAAGCAAACAGAAAATTGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: QSRQTQKYCLLQSKQTENCWATA*ASMVAM
Trigger: CATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCA...ATTTTCTGTTTGCTTGCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCCCTGCAGCAGCCAGATaGGCAGTTACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTPAAAR*AVTSSA
Trigger: AGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGG...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTTCTCTTTCGGATAGATaGATTAGACTCAAACACATG +
Preference number: 4 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSSLSDR*IRLKHM
Trigger: CATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGA...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TTTGGGACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTCTCTTTCGGATAGATaGATTAGACTCAAACACATG +
Preference number: 4 (lower is better)
Translates to: FGTVKSVAFIPPDPRVVLSLSDR*IRLKHM
Trigger: CATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGA...AAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTAAGCATCAGCCAATGTaGCTACTGTTGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPKHQPM*LLLPLY
Trigger: GTACAGGGGCAACAGTAGCCACATTGGCTGATGCTT...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTHRPVT*PSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTG...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCTGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCTGCCATCAGGGTTGCTaGAGGTCTGTACTACGGTCT +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTCHQGC*RSVLRS
Trigger: AGACCGTAGTACAGACCTTCAGCAACCCTGATGGCA...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTCACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGCACATTCTCCAAAGGTaGTGCGCCAAACACCTTGAA +
Preference number: 4 (lower is better)
Translates to: HTRKYTHISAQRSLATIWHILQR*CAKHLE
Trigger: TTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTG...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCAAGCAAACAGAAAATCATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QSRQTQKYCLLQSKQTENHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...ATTTTCTGTTTGCTTGCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCCCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFCAQCT*LHGPAG
Trigger: TCCAGCAGGTCCATGTAGCCACGTACACTGAGCACA...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCAAACATCAACATTCAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: PNINIQSRQTQKYCLLQSPWDIF*PPDRLA
Trigger: TGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGG...GCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTGAATGTTGATGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCCTATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QKIKAKAEAKAPFVLCFPMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...AGGGAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPSDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACT...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
3UTR CAA 72 bp TACACACATTTCTGCACAAAGAAGTCTGGCCACAATTaGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: YTHFCTKKSGHN*AFWDSEIGGVH
Trigger: ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPDLLGH*MGFYGS
Trigger: GCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTC...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTGTTTGGAGGGTGAGATaGAGAGTACAATCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFVWRVR*RVQSLA
Trigger: AGCAAGCGATTGTACTCTGCATCTCACCCTCCAAAC...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCAAACATCAACATTCAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PNINIQSRQTQKYCLLQSILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...GCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTGAATGTTGATGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp CCAAACTCTTTCAAAAGTAAACCAGAACTTGGTTTCTACTACTTCAATGTCAGTGCCATGTGTTCAGTTTaGGTCACTCCGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PNSFKSKPELGFYYFNVSAMCSV*VTPCSS
Trigger: GGAGGAGCACGGAGTGACCCAAACTGAACACATGGC...ACTGACATTGAAGTAGTAGAAACCAAGTTCTGGTTTACTTTTGAAAGAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCATCTCTTTCGGATAGATaGATTAGACTCAAACACATG +
Preference number: 4 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPSLSDR*IRLKHM
Trigger: CATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGA...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: HTRKYTHISAQRSLATIWILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTGAATAGTATGGTCCGTAATGCCTaGGTCCATGAAACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SPSVCNRTDLTTKQLLNSMVRNA*VHETLC
Trigger: ACAAAGGGTTTCATGGACCCAGGCATTACGGACCAT...ACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPDACVV*MVISPP
Trigger: GGGCGGTGAAATGACCATCCAGACGACGCAAGCATC...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp CCAAACATCAACATTCAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCTTAGACTCAAACACATaGGGCCGTTTCCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PNINIQSRQTQKYCLLQSLDSNT*GRFRFF
Trigger: GAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAA...GCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTGAATGTTGATGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp CAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCAAGCAAACAGAAAATCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: QSRQTQKYCLLQSKQTENLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...ATTTTCTGTTTGCTTGCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR TCA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: FIFLAISQTIGRLISPQRLYYGL*WYEMSY
Trigger: ATAGCTCATCTCGTACCATCACAGACCGTAGTACAG...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR TCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPCGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAACTGCCAACCACA...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp CCAAACATCAACATTCAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGAT +
Preference number: 4 (lower is better)
Translates to: PNINIQSRQTQKYCLLQSRSKRV*CLFRID
Trigger: ATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCG...GCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTGAATGTTGATGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGATTCTCCAAAGGTGCTaGGCCAAACACCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: FIFLAISQTIGRLISPQRILQRC*AKHLED
Trigger: GTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAAT...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCAAGCAAACAGAAAATGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: QSRQTQKYCLLQSKQTENGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...ATTTTCTGTTTGCTTGCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp TTTATCTTCTTGGCAATTTCTCAAACTATCGGGAGGCTTATTTCACCACAAAGGGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCA +
Preference number: 4 (lower is better)
Translates to: FIFLAISQTIGRLISPQRGLPGS*SCTFAP
Trigger: TGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACC...CCTTTGTGGTGAAATAAGCCTCCCGATAGTTTGAGAAATTGCCAAGAAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp TCCAACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACATCTCTGGGATAAATaGCCGAAGCTGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SNIVPSDFRNVVKNQTKPHLWDK*PKLSLG
Trigger: ACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATG...TGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp TCCAACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCAGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATT +
Preference number: 4 (lower is better)
Translates to: SNIVPSDFRNVVKNQTKPVASDA*VVWMVI
Trigger: AATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...TGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCTTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCTTTGTCCACAGAGACTaGAATCCCATCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTFVHRD*NPIDGE
Trigger: CTCACCATCGATGGGATTCCAGTCTCTGTGGACAAA...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CCA 90 bp CCAAACATCAACATTCAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PNINIQSRQTQKYCLLQSILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...GCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTGAATGTTGATGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR GCA 90 bp ATTGATATGCAAATTTCCCACCCCTCCCTTATCACATACAGAAAAGAACATACAGTTTGGAGGGTGAGATaGAGAGTACAATCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IDMQISHPSLITYRKEHTVWRVR*RVQSLA
Trigger: AGCAAGCGATTGTACTCTGCATCTCACCCTCCAAAC...TGTATGTTCTTTTCTGTATGTGATAAGGGAGGGGTGGGAAATTTGCATATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR GCA 90 bp CCAAACTCTTTCAAAAGTAAACCAGAACTTGGTTTCTACTACTTCAATGTCAGTCAATGTGGCTACTGTTaGCCCTGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: PNSFKSKPELGFYYFNVSQCGYC*PCTNLD
Trigger: ATCCAGGTTGGTACAGGGGCAACAGTAGCCACATTG...ACTGACATTGAAGTAGTAGAAACCAAGTTCTGGTTTACTTTTGAAAGAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp CAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCAAGCAAACAGAAAATCTATACTGTGTGTGGTaGTGGCCTGAGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QSRQTQKYCLLQSKQTENLYCVW*WPEFVF
Trigger: AAACACAAACTCAGGCCACCACCACACACAGTATAG...ATTTTCTGTTTGCTTGCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CCA 90 bp TCCAACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCAGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SNIVPSDFRNVVKNQTKPELYCV*WWPEFV
Trigger: CACAAACTCAGGCCACCACCACACACAGTATAGCTC...TGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR TCA 90 bp CCAAACTCTTTCAAAAGTAAACCAGAACTTGGTTTCTACTACTTCAATGTCAGTTGTGATGGTACGAGATaGGCTATACTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PNSFKSKPELGFYYFNVSCDGTR*AILCVV
Trigger: CACCACACACAGTATAGCTCATCTCGTACCATCACA...ACTGACATTGAAGTAGTAGAAACCAAGTTCTGGTTTACTTTTGAAAGAGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTGTTTGGAGGGTGAGATaGAGAGTACAATCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPVWRVR*RVQSLA
Trigger: AGCAAGCGATTGTACTCTGCATCTCACCCTCCAAAC...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp TCCAACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCAATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SNIVPSDFRNVVKNQTKPILEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAT...TGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR GCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTGAAACCCTTTGTTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CCA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTTCTCTTTCGGATAGATaGATTAGACTCAAACACATG +
Preference number: 4 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPSLSDR*IRLKHM
Trigger: CATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGA...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS CCA 90 bp CTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTaGTTACCACAGTCTGGTACATGCTCACAGGGATCTGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: LGPWPPAPARCPGRG*LPQSGTCSQGSGPG
Trigger: GCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS CCA 90 bp CTGGTGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTaGGCGAGGCTGGTTACCACAGTCTGGTACATGCTCACAGGGATC +
Preference number: 5 (lower is better)
Translates to: LVVTGAMATCTGPLP*ARLVTTVWYMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS-3UTR CAA 90 bp GGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: GHWGHGHLHRPVALGEAGTSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...ACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS TCA 90 bp GGCCTGTTGAGGGCCATGGTGACAGTGGCTCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCTTCTGCCAGTGATGCTACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLLRAMVTVAPCCIS*EAATAASASDATAW
Trigger: CCAGGCGGTAGCATCACTGGCAGAAGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCCACTGTCACCATGGCCCTCAACAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115204.8
ENSMUST00000170535.9
CDS GCA 90 bp ATATCCTGGTGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTTaGCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGCTCACAG +
Preference number: 5 (lower is better)
Translates to: ISWWSLGPWPPAPAR*PGRGWLPQSGTCSQ
Trigger: CTGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS CCA 90 bp TGTCCCCCACCTTGTAAGGTGGCTTCCGCCAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTGAGGGCCATGGTGACAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CPPPCKVASARVATA*AAASLLRAMVTVAP
Trigger: GGGAGCCACTGTCACCATGGCCCTCAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS GCA 90 bp GCGGCTTCTGCCAGTGATGCTACCGCCTGGGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATTTCACCGCCCTGTAACGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: AASASDATAWVASDA*VVWMVISPPCNVAQ
Trigger: CTGGGCCACGTTACAGGGCGGTGAAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 90 bp TCACTGTTGAGGGCCATGGTGACAGTGGCTCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCTTCTGCCAGTGATGCTACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLLRAMVTVAPCCIS*EAATAASASDATAW
Trigger: CCAGGCGGTAGCATCACTGGCAGAAGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCCACTGTCACCATGGCCCTCAACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS CCA 90 bp GAGAAGCTGCCACTGCGGCTTCTGCCAGTGATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCGTCTGGATGGTCATTTCACCGCCCT +
Preference number: 5 (lower is better)
Translates to: EKLPLRLLPVMLPPG*PLMLASSGWSFHRP
Trigger: AGGGCGGTGAAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCAGTGGCAGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp CTGCGGTTTCCCCAGACAGGACTATCTGTCCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGACAGCATGGGCGGCAGCTTCACTGT +
Preference number: 5 (lower is better)
Translates to: LRFPQTGLSVPHLVR*LPPEWRQHGRQLHC
Trigger: ACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGGGACAGATAGTCCTGTCTGGGGAAACCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS CCA 90 bp ACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTaGTACATGCTCACAGGGATCTGGACCAGGCCATTAGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: TCTGPLPWARLVTTV*YMLTGIWTRPLASW
Trigger: CCAAGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS-3UTR CAA 90 bp CACCTCCACAGCCTGGCCATCCATGGTGACTGCGCTGTCCGATATCCTGGTGGTGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: HLHSLAIHGDCAVRYPGGGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...ACCACCAGGATATCGGACAGCGCAGTCACCATGGATGGCCAGGCTGTGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CAA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGACCTGCACCGGCCCGTaGCCCTGGGCGAGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVTCTGP*PWARLV
Trigger: AACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS TCA 90 bp GTCCACAGAGACTGGAATCCCATCGATGGTGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGCAGGGGCGTGTTCTGCCAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VHRDWNPIDGERRQL*INLLWRRGVFCQSR
Trigger: TCTGCTCTGGCAGAACACGCCCCTGCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTCACCATCGATGGGATTCCAGTCTCTGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 90 bp CAGCGGCCATTCCCACAGGACCTAGTATATGCGAGGCCCTGGGTTTaGTCCCCAGCACTGCAGCAGCCAGATGGGCAGTTACCTCATCAG +
Preference number: 5 (lower is better)
Translates to: QRPFPQDLVYARPWV*SPALQQPDGQLPHQ
Trigger: CTGATGAGGTAACTGCCCATCTGGCTGCTGCAGTGCTGGGGATCAAACCCAGGGCCTCGCATATACTAGGTCCTGTGGGAATGGCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000123194.8
CDS CCA 90 bp GCCAGTGATGCTACCGCCTGGGTGGCCTCTGATGCTTGCGTCGTCTaGATGGTCATTTCACCGCCCTGTAACGTGGCCCAGTTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: ASDATAWVASDACVV*MVISPPCNVAQFCS
Trigger: GGAACAAAACTGGGCCACGTTACAGGGCGGTGAAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS-3UTR CAA 90 bp CCACTGGGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: PLGGSFGEGRGHLRLSLSAAPNT*KTGLGL
Trigger: CAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGC...TGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTGGGCGGCAGCTTCACTGTaGAGGGCCATGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: VLDLPSFGESSRGLGGHWAAASL*RAMVTV
Trigger: CACTGTCACCATGGCCCTCAACAGTGAAGCTGCCGC...CCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp ACAACCATGGTCCAGAGTGCACCCTGGGCACTGTCCCCTCTTCAGTGGTTAGCTGCGGCAGCTTCACTGTaGAGGGCCATGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: TTMVQSAPWALSPLQWLAAAASL*RAMVTV
Trigger: CACTGTCACCATGGCCCTCAACAGTGAAGCTGCCGC...AGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTCTGGACCATGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CAA 90 bp GACCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCCTCCATCTGGGCCTGTaGAGGGCCATGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: DRPHMGFLKEGEHSTLPTLHLGL*RAMVTV
Trigger: CACTGTCACCATGGCCCTCAACAGGCCCAGATGGAG...GGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS GCA 90 bp TCCTCGGGGGAGGAAGGGGAGTCTTCATCAGCACTTAGCATACTGTaGTCAGTGTACGTGGCTACATGGACCTGCTGGACTTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SSGEEGESSSALSIL*SVYVATWTCWTCWA
Trigger: GGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACACTGAGCACAGTATGCTAAGTGCTGATGAAGACTCCCCTTCCTCCCCCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 90 bp AAGCACAGGGGATCCGAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGACTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: KHRGSEAISILDSSK*SDGCCGFPRQDYLS
Trigger: GGACAGATAGTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCGGATCCCCTGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS GCA 90 bp CACAGGGATCTGGACCAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGACTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: HRDLDQAISILDSSK*SDGCCGFPRQDYLS
Trigger: GGACAGATAGTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTGGTCCAGATCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS CCA 90 bp GTGATGCTACCGCCTGGGTGGCCTCTGATGCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTAACGTGGCCCAGTTTTGTTCCACCT +
Preference number: 5 (lower is better)
Translates to: VMLPPGWPLMLASSG*SFHRPVTWPSFVPP
Trigger: AGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTGAAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp GCCATGATTTCTGGAAGCACAGGGGATCCGAGGCCATTAGCATCTTaGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGTTTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: AMISGSTGDPRPLAS*TPVSAPTAAAVSPD
Trigger: GTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCGGATCCCCTGTGCTTCCAGAAATCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CAGGCCTGTGCCGCCAGGATGTGCCTGGGAAAAGTCCTCACAGAGTCTTCTGACGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: QACAARMCLGKVLTESSDAAPNT*KTGLGL
Trigger: CAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGC...GTCAGAAGACTCTGTGAGGACTTTTCCCAGGCACATCCTGGCGGCACAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTGGGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: VLDLPSFGESSRGLGGHWGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...CCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTAAAAACCTGCACCGGCCCGTaGCCCTGGGCGAGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: DSEIGGVHSTRSQSGALKTCTGP*PWARLV
Trigger: AACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT...TTTTAAAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS TCA 90 bp CTGCAGCAGCCAGATGGGCAGTTACCTCATCAGCTGCCGTGGAGTTaGGGATGTCCGAGTCATCATAAGAAGTGTCCTCGGGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LQQPDGQLPHQLPWS*GCPSHHKKCPRGRK
Trigger: CTTCCTCCCCCGAGGACACTTCTTATGATGACTCGGACATCCTCAACTCCACGGCAGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 90 bp TGGATTAGACTCAAACACATGAGGCCGTTTCCGTTTCTTCCCTGTTaGCACAGCAGCAGCAGCGGCCATTCCCACAGGACCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WIRLKHMRPFPFLPC*HSSSSGHSHRTCSS
Trigger: GCTGCTGCAGGTCCTGTGGGAATGGCCGCTGCTGCTGCTGTGGCAACAGGGAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp GTGTACGTGGCTACATGGACCTGCTGGACTTGCTGGGCCACTGCATaGGCTTCTATGGTAGCCATGTGTTCAGTTTGGGTCACTCCGTGC +
Preference number: 5 (lower is better)
Translates to: VYVATWTCWTCWATA*ASMVAMCSVWVTPC
Trigger: GCACGGAGTGACCCAAACTGAACACATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000148990.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS-3UTR CAA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCGGCAGCTTCACTGTaGAGGGCCATGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSAAASL*RAMVTV
Trigger: CACTGTCACCATGGCCCTCAACAGTGAAGCTGCCGC...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTTGGCGGCAGCTTCACTGTaGAGGGCCATGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: GDCVWSCTLPPTNLGGFLAAASL*RAMVTV
Trigger: CACTGTCACCATGGCCCTCAACAGTGAAGCTGCCGC...CAAGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTTGCGAGGCCCTGGGTTaGATCCCCAGCACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSCEALG*IPSTAA
Trigger: TGCTGCAGTGCTGGGGATCAAACCCAGGGCCTCGCA...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115199.8
CDS-3UTR CAA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTACCTGCACCGGCCCGTaGCCCTGGGCGAGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGTCTGP*PWARLV
Trigger: AACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGT...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS GCA 90 bp CTCAGTGTACGTGGCTACATGGACCTGCTGGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGCCATGTGTTCAGTTTGGGTCACTCC +
Preference number: 5 (lower is better)
Translates to: LSVRGYMDLLDLLGH*MGFYGSHVFSLGHS
Trigger: GGAGTGACCCAAACTGAACACATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000148990.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 90 bp TCCCACAGGACCTGCAGCAGCCAGATGGGCAGTTACCTCATCAGCTaGCGTGGAGTTGAGGATGTCCGAGTCATCATAAGAAGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SHRTCSSQMGSYLIS*RGVEDVRVIIRSVL
Trigger: GAGGACACTTCTTATGATGACTCGGACATCCTCAACTCCACGGCAGCTGATGAGGTAACTGCCCATCTGGCTGCTGCAGGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 90 bp TGCATGAACTCCATCTGGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGACTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: CMNSIWAISILDSSK*SDGCCGFPRQDYLS
Trigger: GGACAGATAGTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCCAGATGGAGTTCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069808.13
ENSMUST00000115206.8
CDS-3UTR CAA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVAAPNT*KTGLGL
Trigger: CAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGC...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PGDCVWSCTLPPTNLGGFPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...GAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACAAAGGACTCAGGCCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PRIAILSARDKLFTKDSGPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...GCCTGAGTCCTTTGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CAA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGGCGGCAGCTTCACTGTaGAGGGCCATGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKAAASL*RAMVTV
Trigger: CACTGTCACCATGGCCCTCAACAGTGAAGCTGCCGC...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp ACAACCATGGTCCAGAGTGCACCCTGGGCACTGTCCCCTCTTCAGTGGTTAGCTGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TTMVQSAPWALSPLQWLAEAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTC...AGCTAACCACTGAAGAGGGGACAGTGCCCAGGGTGCACTCTGGACCATGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS TCA 90 bp CGACACGGTGCCATCAGGGTTGCTGAAGGTCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTATACTGTGTGTGGTGGTGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: RHGAIRVAEGLYYGL*WYEMSYTVCGGGLS
Trigger: ACTCAGGCCACCACCACACACAGTATAGCTCATCTCGTACCATCACAGACCGTAGTACAGACCTTCAGCAACCCTGATGGCACCGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 90 bp AAGACAGGGTTGGGTTTGGAGGGTGAGATGCAGAGTACAATCGCTTaGTGTCCCACTCGCGTCGTGTACTCATCCAACGTGGCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: KTGLGLEGEMQSTIA*CPTRVVYSSNVALS
Trigger: ACTCAGAGCCACGTTGGATGAGTACACGACGCGAGTGGGACAGCAAGCGATTGTACTCTGCATCTCACCCTCCAAACCCAACCCTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 90 bp ACAGTCTGCCATAAAGAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGACTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: TVCHKEAISILDSSK*SDGCCGFPRQDYLS
Trigger: GGACAGATAGTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115208.8
ENSMUST00000132866.2
CDS CCA 90 bp GCACTTAGCATACTGTGCTCAGTGTACGTGGCTACATGGACCTGCTaGACTTGCTGGGCCACTGCATGGGCTTCTATGGTAGCCATGTGT +
Preference number: 5 (lower is better)
Translates to: ALSILCSVYVATWTC*TCWATAWASMVAMC
Trigger: ACACATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACACTGAGCACAGTATGCTAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp AAGGGGAGTCTTCATCAGCACTTAGCATACTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGACTTGCTGGGCCACTGCATGGGCTT +
Preference number: 5 (lower is better)
Translates to: KGSLHQHLAYCAQCT*LHGPAGLAGPLHGL
Trigger: AAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACACTGAGCACAGTATGCTAAGTGCTGATGAAGACTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp TTCTGTGCGGACATCACTGCGGACATTGGCCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCAGCTTTCTTTCCCCCAGCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: FCADITADIGPWDIF*PPDRLAAFFPPAWF
Trigger: AAACCAGGCTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp CCCACAAGAGTGCCTGTATCCTCTGGTCTTGGAGGCCATGATTTCTaGAAGCACAGGGGATCCGAGGCCATTAGCATCTTGGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: PTRVPVSSGLGGHDF*KHRGSEAISILDSS
Trigger: ACTGGAGTCCAAGATGCTAATGGCCTCGGATCCCCTGTGCTTCCAGAAATCATGGCCTCCAAGACCAGAGGATACAGGCACTCTTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SSSQEKHGYLATLICLAPAAPNT*KTGLGL
Trigger: CAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGC...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GGAGGCAGCTTTGGTGAAGGACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTTCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: GGSFGEGRGHLRLSLSVASRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...AGCTACTGACAGACTCAGGCGGAGGTGACCACGTCCTTCACCAAAGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: PLSFVSLPDLGRGSAALRGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...CCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTGGACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: VLDLPSFGESSRGLGGHWTSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...CCAGTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp ATGTGCGCACGCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: MCARTLCPWTSQALSGPRGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...GCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGCGTGCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGCAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMQAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTG...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACAAAGGACTCAGGCCCACCTGTAGCCTTCTaGCCAGGATCCACTTGTAAC +
Preference number: 5 (lower is better)
Translates to: PRIAILSARDKLFTKDSGPPVAF*PGSTCN
Trigger: GTTACAAGTGGATCCTGGCAAGAAGGCTACAGGTGG...GCCTGAGTCCTTTGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS CCA 90 bp ATACTGTGCTCAGTGTACGTGGCTACATGGACCTGCTGGACTTGCTaGGCCACTGCATGGGCTTCTATGGTAGCCATGTGTTCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: ILCSVYVATWTCWTC*ATAWASMVAMCSVW
Trigger: CCAAACTGAACACATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACACTGAGCACAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000148990.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS-3UTR CAA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGACCTTGAAGACAGGGTaGGGTTTGGAGGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: SSSQEKHGYLATLICLAPTLKTG*GLEGEM
Trigger: CATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGT...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACACCTTGAAGACAGGGTaGGGTTTGGAGGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: HGFSERGRAFHTANQLCNTLKTG*GLEGEM
Trigger: CATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGT...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSAAPNT*KTGLGL
Trigger: CAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGC...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CCGGCCTCACATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGTCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: PASHGFSERGRAFHTANQSRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...CTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATGTGAGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp GCACTCTCTGTCCCTGGACTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: ALSVPGLHKHSLDHAVSWRPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...CCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAGTCCAGGGACAGAGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCACGGGACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: CFPSRSRKRVSSSQEKHGTSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...CCCGTGCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGTSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CAGGGTATGAAAGGAGTTCCCCACACAGGAGTTAGGAAGACAACCATGGTCCAGACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: QGMKGVPHTGVRKTTMVQTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...CTGGACCATGGTTGTCTTCCTAACTCCTGTGTGGGGAACTCCTTTCATACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CAA 90 bp GCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: APFVLCFPSRSRKRVSSSPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...AGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSEAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTC...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS-3UTR CAA 90 bp CAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGTTCTAGGCCTGTAGCCTTCTaGCCAGGATCCACTTGTAAC +
Preference number: 5 (lower is better)
Translates to: QVTVFGHVPYHPRIWVGSRPVAF*PGSTCN
Trigger: GTTACAAGTGGATCCTGGCAAGAAGGCTACAGGCCT...AGAACCCACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115208.8
CDS TCA 90 bp CCACCTCTCCATCAGCCACAGCAGAGTAATTCACTTGGGCAACAGTaGCTGTGGTTGGCAGTTCTGAAGCATCAGCCAATGTGGCTACTG +
Preference number: 5 (lower is better)
Translates to: PPLHQPQQSNSLGQQ*LWLAVLKHQPMWLL
Trigger: CAGTAGCCACATTGGCTGATGCTTCAGAACTGCCAACCACAGTCACTGTTGCCCAAGTGAATTACTCTGCTGTGGCTGATGGAGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp ATCTTCTGGCCACCAGATAGGCTTGCAGCTTTCTTTCCCCCAGCCTaGTTTCCCCCGACCTGTGGAATACTTGAGCATCTCTGGGATAAA +
Preference number: 5 (lower is better)
Translates to: IFWPPDRLAAFFPPA*FPPTCGILEHLWDK
Trigger: TTTATCCCAGAGATGCTCAAGTATTCCACAGGTCGGGGGAAACCAGGCTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCCAGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS-3UTR CAA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACACCTTGAAGACAGGGTaGGGTTTGGAGGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: PPPESVSSSMHDPGMNENTLKTG*GLEGEM
Trigger: CATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGT...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCTCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGSRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCGGCCACTCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: CVLDLPSFGESSRGLGGHSRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...GTGGCCGCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: HGFSERGRAFHTANQLCNTSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp GGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACCCCAGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: GFLKEGEHSTLPTSSATPGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...TGGGGTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQETVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCAGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LSGEARVPSNTHLFSSASEAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTC...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTGTATCCTCTGGTCTaGGAGGCCATGATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SSSQEKHGYLATLICLAPLYPLV*EAMISG
Trigger: TCCAGAAATCATGGCCTCCAAGACCAGAGGATACAG...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PPPESVSSSMHDPGMNENQAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTG...GTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS TCA 90 bp TGTACTTTCGCACCACATTCTCCAAAGGTGCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGGAGGGTGAGATGCAGAGTACAATCG +
Preference number: 5 (lower is better)
Translates to: CTFAPHSPKVLRQTP*RQGWVWRVRCRVQS
Trigger: CGATTGTACTCTGCATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTGGTGCGAAAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 90 bp AGCAGAGTAATTCACTTGGGCAACAGTGACTGTGGTTGGCAGTTCTaGAGCATCAGCCAATGTGGCTACTGTTGCCCCTGTACCAACCTG +
Preference number: 5 (lower is better)
Translates to: SRVIHLGNSDCGWQF*SISQCGYCCPCTNL
Trigger: CAGGTTGGTACAGGGGCAACAGTAGCCACATTGGCTGATGCTTCAGAACTGCCAACCACAGTCACTGTTGCCCAAGTGAATTACTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 90 bp TTGTTTTTGCTCTTCTGTGCGGACATCACTGCGGACATTGGCCCATaGGATATCTTCTGGCCACCAGATAGGCTTGCAGCTTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LFLLFCADITADIGP*DIFWPPDRLAAFFP
Trigger: GGGAAAGAAAGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS-3UTR CAA 90 bp CCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGAATCTAGCAGAGGTCTAGGCCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: PRCVLDLPSFGESSRGLGRPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...GCCTAGACCTCTGCTAGATTCACCGAAGGAAGGAAGATCCAGGACACAGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp CTGAAATACAGCTGCAGACAGCTGGAGAACACGGTTCCCACGGCGCACCCTGATGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: LKYSCRQLENTVPTAHPDGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...ATCAGGGTGCGCCGTGGGAACCGTGTTCTCCAGCTGTCTGCAGCTGTATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SSSQEKHGYLATLICLAPGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGCTTCATCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: LSGEARVPSNTHLFSSASSRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...TGAAGCGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CAGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: QQLSGEARVPSNTHLFSSRPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...GGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQETSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CTTCACAAGCACTCTCTGGACCACGCTGTGTCCTGGATCTTCCTTCCTTCGGTGATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: LHKHSLDHAVSWIFLPSVILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...CACCGAAGGAAGGAAGATCCAGGACACAGCGTGGTCCAGAGAGTGCTTGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp ACGTGGTCACCTCCGCCTGAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: TWSPPPESVSSSMHDPGMGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...CATACCAGGGTCATGCATTGAGCTACTGACAGACTCAGGCGGAGGTGACCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp ACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATCCAATGTGGCTACTGTaGCCCCTGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: TKPNHLPHSQDQSPNHTYPMWLL*PLYQPG
Trigger: TCCAGGTTGGTACAGGGGCAACAGTAGCCACATTGG...ATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp AGCAGCTCTCAGGAGAAGCACGGGTACCTAGCAACACTCATCTGTTTAGCTCCGGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: SSSQEKHGYLATLICLAPGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...CGGAGCTAAACAGATGAGTGTTGCTAGGTACCCGTGCTTCTCCTGAGAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CATGGGTTTTCTGAAAGAGGGCGAGCATTCCACACTGCCAACCAGCTCTGCAACGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: HGFSERGRAFHTANQLCNGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...GTTGCAGAGCTGGTTGGCAGTGTGGAATGCTCGCCCTCTTTCAGAAAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp CTTACAACCAAGCAACTCTTGAATAGTCGTGAGACTGAGGGTTCCTGGGAAGGGGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LTTKQLLNSRETEGSWEGGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...CCCTTCCCAGGAACCCTCAGTCTCACGACTATTCAAGAGTTGCTTGGTTGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115208.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATCAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHQAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTG...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: FVLCFPSRSRKRVSSSQERPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...CTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATACATCACTGCGGACATaGGCCCATGGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHTSLRT*AHGISS
Trigger: AGAAGATATCCCATGGGCCAATGTCCGCAGTGATGT...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: VLCFPSRSRKRVSSSQEKILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...CTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GCAAAGGCTCCCTTTGTCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: AKAPFVLCFPSRSRKRVSILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...GCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGACAAAGGGAGCCTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp TACAAAGGACTCAGGCCATCCATAGAAGAAGCAGAGCCTGAAATGGCAGCGCTGATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: YKGLRPSIEEAEPEMAALILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...CAGCGCTGCCATTTCAGGCTCTGCTTCTTCTATGGATGGCCTGAGTCCTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CAA 90 bp TCCTTTGTTTCCCTTCCAGATCTAGGAAGAGGGTCAGCAGCTCTCAGGAGAAGCGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: SFVSLPDLGRGSAALRRSGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...GCTTCTCCTGAGAGCTGCTGACCCTCTTCCTAGATCTGGAAGGGAAACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GAAAACCAGGTGACTGTGTTTGGTCATGTACCCTACCACCCACGAATCTGGGTGGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: ENQVTVFGHVPYHPRIWVGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...CACCCAGATTCGTGGGTGGTAGGGTACATGACCAAACACAGTCACCTGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GACAGTGAAATCGGTGGCGTTCATTCCACCAGATCCCAGAGTGGTGCTTTAAAAGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: DSEIGGVHSTRSQSGALKGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...TTTTAAAGCACCACTCTGGGATCTGGTGGAATGAACGCCACCGATTTCACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TCTGAACTATCCTCGCATAGCCATCTTGTCCGCCAGGGACAAGCTCTTTACAAAGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SELSSHSHLVRQGQALYKGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...TTTGTAAAGAGCTTGTCCCTGGCGGACAAGATGGCTATGCGAGGATAGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CAA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: HTRKYTHISAQRSLATIWTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS CCA 90 bp TCTGAGTTTCCGAAGCAAACGTGTCTGCTGTCTCTTTCGGATAGATaGATTAGACTCAAACACATGAGGCCGTTTCCGTTTCTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SEFPKQTCLLSLSDR*IRLKHMRPFPFLPC
Trigger: ACAGGGAAGAAACGGAAACGGCCTCATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCGGAAACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS-3UTR CAA 90 bp GAGTCTGTCAGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: ESVSSSMHDPGMNENQVTRPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...AGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACTGACAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AAGAAGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATGGTGGTGGCCTGAGTTaGTGTTTGCTGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: KKSGHNLAFWDSEIGGVHGGGLS*CLLIFK
Trigger: TTTGAAGATCAGCAAACACAAACTCAGGCCACCACC...ATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GTTCTTGTTCCCACAGTTCACCTTGATTTCATACAGGTAATTCCATGCAGGTTTACCTTGAAGACAGGGTaGGGTTTGGAGGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: VLVPTVHLDFIQVIPCRFTLKTG*GLEGEM
Trigger: CATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGT...AAACCTGCATGGAATTACCTGTATGAAATCAAGGTGAACTGTGGGAACAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AGTCTGGCCACAATTTGGCTTTTTGGGACAGTGAAATCGGTGGCGTTCATTCCAGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: SLATIWLFGTVKSVAFIPGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...TGGAATGAACGCCACCGATTTCACTGTCCCAAAAAGCCAAATTGTGGCCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp GCTCTTTACAAAGGACTCAGGCCATCCATAGAAGAAGCAGAGCCTGAAATGGCAGGCCTGAGTTTGTGTTaGCTGATCTTCAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: ALYKGLRPSIEEAEPEMAGLSLC*LIFKSI
Trigger: TATGCTTTTGAAGATCAGCAAACACAAACTCAGGCC...TGCCATTTCAGGCTCTGCTTCTTCTATGGATGGCCTGAGTCCTTTGTAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132866.2
CDS-3UTR CAA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCACCTTGAAGACAGGGTaGGGTTTGGAGGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTTLKTG*GLEGEM
Trigger: CATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGT...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPGHQIG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCC...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp ACCAAACCAAACCACCTACCCCACAGTCAAGACCAAAGCCCAAACCATACATATATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: TKPNHLPHSQDQSPNHTYILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...ATATGTATGGTTTGGGCTTTGGTCTTGACTGTGGGGTAGGTGGTTTGGTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp AGTAGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: SSSMHDPGMNENQVTVFGILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...ACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AGCTCAATGCATGACCCTGGTATGAACGAAAACCAGGTGACTGTGTTTGGTCATATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: SSMHDPGMNENQVTVFGHILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...ATGACCAAACACAGTCACCTGGTTTTCGTTCATACCAGGGTCATGCATTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFEAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTC...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPAAPNT*KTGLGL
Trigger: CAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGC...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp CACACACGTAAGTATACACACATTTCTGCACAAAGAAGTCTGGCCACAATTTGGCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: HTRKYTHISAQRSLATIWRPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...CCAAATTGTGGCCAGACTTCTTTGTGCAGAAATGTGTGTATACTTACGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TCCAACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCAACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACG +
Preference number: 5 (lower is better)
Translates to: SNIVPSDFRNVVKNQTKPTVPSG*LKVCTT
Trigger: CGTAGTACAGACCTTCAGCAACCCTGATGGCACCGT...TGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS-3UTR CAA 90 bp AAACAGAAAATAAAAGCAAAGGCTGAAGCAAAGGCTCCCTTTGTCCTTTGTTTCCTGTATCCTCTGGTCTaGGAGGCCATGATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: KQKIKAKAEAKAPFVLCFLYPLV*EAMISG
Trigger: TCCAGAAATCATGGCCTCCAAGACCAGAGGATACAG...GAAACAAAGGACAAAGGGAGCCTTTGCTTCAGCCTTTGCTTTTATTTTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp CAATCAAGGCAAACCCAAAAATATTGCCTCCTGCAAAGCAAGCAAACAGAAAATTCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: QSRQTQKYCLLQSKQTENSRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...ATTTTCTGTTTGCTTGCTTTGCAGGAGGCAATATTTTTGGGTTTGCCTTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS-3UTR CAA 90 bp GGTTACCAAAACTTTCTTTCCAAGTCGAGAGACTTAATTCCATTTGATTGCACCTCCAGGATCATGCTCTaGTACTTTCGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: GYQNFLSKSRDLIPFDCTSRIML*YFRTTF
Trigger: GAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGA...GGTGCAATCAAATGGAATTAAGTCTCTCGACTTGGAAAGAAAGTTTTGGTAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp TCACCTTCAGTTTGTAACAGGACTGACCTTACAACCAAGCAACTCTTGAATAGTATCCTCCCGCCCATGTaGCTTATAGCAATTTTTAAC +
Preference number: 5 (lower is better)
Translates to: SPSVCNRTDLTTKQLLNSILPPM*LIAIFN
Trigger: GTTAAAAATTGCTATAAGCAACATGGGCGGGAGGAT...ACTATTCAAGAGTTGCTTGGTTGTAAGGTCAGTCCTGTTACAAACTGAAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115211.8
ENSMUST00000115212.8
CDS-3UTR CAA 90 bp AACATTGTACCTTCAGATTTCAGAAATGTAGTTAAGAACCAAACCAAACCACCTCGACCTGTGGAATACTaGAGCATCTCTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: NIVPSDFRNVVKNQTKPPRPVEY*SISGIN
Trigger: ATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCG...AGGTGGTTTGGTTTGGTTCTTAACTACATTTCTGAAATCTGAAGGTACAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115204.8
CDS CCA 72 bp ACTGGGGCCATGGCCACCTGCACCGGCCCGTTGCCCTaGGCGAGGCTGGTTACCACAGTCTGGTACATGCTC +
Preference number: 6 (lower is better)
Translates to: TGAMATCTGPLP*ARLVTTVWYML
Trigger: GAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS CCA 72 bp GCTGCCACTGCGGCTTCTGCCAGTGATGCTACCGCCTaGGTGGCCTCTGATGCTTGCGTCGTCTGGATGGTC +
Preference number: 6 (lower is better)
Translates to: AATAASASDATA*VASDACVVWMV
Trigger: GACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCAGTGGCAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp CCCCAGACAGGACTATCTGTCCCCCACCTTGTAAGGTaGCTTCCGCCAGAGTGGCGACAGCATGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PQTGLSVPHLVR*LPPEWRQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCACCTTACAAGGTGGGGGACAGATAGTCCTGTCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS CCA 72 bp TGGCCACCTGCACCGGCCCGTTGCCCTGGGCGAGGCTaGTTACCACAGTCTGGTACATGCTCACAGGGATCT +
Preference number: 6 (lower is better)
Translates to: WPPAPARCPGRG*LPQSGTCSQGS
Trigger: AGATCCCTGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS CAA 90 bp GATATCCTGGTGGTCACTGGGGCCATGGCCACCTGCACCGGCCCGTaGCCCTGGGCGAGGCTGGTTACCACAGTCTGGTACATGCTCACA +
Preference number: 6 (lower is better)
Translates to: DILVVTGAMATCTGP*PWARLVTTVWYMLT
Trigger: TGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCCGGTGCAGGTGGCCATGGCCCCAGTGACCACCAGGATATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS TCA 72 bp AGGGCCATGGTGACAGTGGCTCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCTTCTGCCAGTGATGCT +
Preference number: 6 (lower is better)
Translates to: RAMVTVAPCCIS*EAATAASASDA
Trigger: AGCATCACTGGCAGAAGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCCACTGTCACCATGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp GCAGCAGCAGCGGCCATTCCCACAGGACCTAGTATATaGGAGGCCCTGGGTTTGATCCCCAGCACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: AAAAAIPTGPSI*EALGLIPSTAA
Trigger: TGCTGCAGTGCTGGGGATCAAACCCAGGGCCTCGCATATACTAGGTCCTGTGGGAATGGCCGCTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000123194.8
CDS CCA 72 bp CCTTGTAAGGTGGCTTCCGCCAGAGTGGCGACAGCATaGGCGGCAGCTTCACTGTTGAGGGCCATGGTGACA +
Preference number: 6 (lower is better)
Translates to: PCKVASARVATA*AAASLLRAMVT
Trigger: TGTCACCATGGCCCTCAACAGTGAAGCTGCCGCCCATGCTGTCGCCACTCTGGCGGAAGCCACCTTACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS CCA 72 bp GGCCCGTTGCCCTGGGCGAGGCTGGTTACCACAGTCTaGTACATGCTCACAGGGATCTGGACCAGGCCATTA +
Preference number: 6 (lower is better)
Translates to: GPLPWARLVTTV*YMLTGIWTRPL
Trigger: TAATGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTAACCAGCCTCGCCCAGGGCAACGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS TCA 72 bp GACTGGAATCCCATCGATGGTGAGAGGCGGCAGCTCTaGATTAACCTCCTGTGGCGCAGGGGCGTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: DWNPIDGERRQL*INLLWRRGVFC
Trigger: GCAGAACACGCCCCTGCGCCACAGGAGGTTAATTCAGAGCTGCCGCCTCTCACCATCGATGGGATTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp GCCAGTGATGCTACCGCCTGGGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATTTCACCGCCCTGTAAC +
Preference number: 6 (lower is better)
Translates to: ASDATAWVASDA*VVWMVISPPCN
Trigger: GTTACAGGGCGGTGAAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp AGCATCTTGGACTCCAGTAAGTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAGGACTATCTGTCCCCCACC +
Preference number: 6 (lower is better)
Translates to: SILDSSKCSDGC*GFPRQDYLSPT
Trigger: GGTGGGGGACAGATAGTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS GCA 72 bp GGATCCGAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: GSEAISILDSSK*SDGCCGFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS GCA 72 bp CTGGACCAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: LDQAISILDSSK*SDGCCGFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
CDS CCA 72 bp CCGCCTGGGTGGCCTCTGATGCTTGCGTCGTCTGGATaGTCATTTCACCGCCCTGTAACGTGGCCCAGTTTT +
Preference number: 6 (lower is better)
Translates to: PPGWPLMLASSG*SFHRPVTWPSF
Trigger: AAAACTGGGCCACGTTACAGGGCGGTGAAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp CCACTGCGGCTTCTGCCAGTGATGCTACCGCCTGGGTaGCCTCTGATGCTTGCGTCGTCTGGATGGTCATTT +
Preference number: 6 (lower is better)
Translates to: PLRLLPVMLPPG*PLMLASSGWSF
Trigger: AAATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTAGCATCACTGGCAGAAGCCGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 90 bp GCAGCGGCCATTCCCACAGGACCTAGTATATGCGAGGCCCTGGGTTaGATCCCCAGCACTGCAGCAGCCAGATGGGCAGTTACCTCATCA +
Preference number: 6 (lower is better)
Translates to: AAAIPTGPSICEALG*IPSTAAARWAVTSS
Trigger: TGATGAGGTAACTGCCCATCTGGCTGCTGCAGTGCTGGGGATCAAACCCAGGGCCTCGCATATACTAGGTCCTGTGGGAATGGCCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000123194.8
CDS CAA 90 bp CTGCGGACATTGGCCCATGGGATATCTTCTGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAGCCTGGTTTCCCCCGACCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: LRTLAHGISSGHQIG*QLSFPQPGFPRPVE
Trigger: TTCCACAGGTCGGGGGAAACCAGGCTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 90 bp GGCCATGATTTCTGGAAGCACAGGGGATCCGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGTTTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: GHDFWKHRGSEAISI*DSSKCSDGCCGFPR
Trigger: TCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCGGATCCCCTGTGCTTCCAGAAATCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS GCA 72 bp TCCATCTGGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: SIWAISILDSSK*SDGCCGFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCCAGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069808.13
ENSMUST00000115206.8
CDS CCA 72 bp TCTGGAAGCACAGGGGATCCGAGGCCATTAGCATCTTaGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGTT +
Preference number: 6 (lower is better)
Translates to: SGSTGDPRPLAS*TPVSAPTAAAV
Trigger: AACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCGGATCCCCTGTGCTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS CAA 72 bp TTCTGGAAGCACAGGGGATCCGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: FWKHRGSEAISI*DSSKCSDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCGGATCCCCTGTGCTTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
CDS TCA 72 bp TTCCCACAGGACCTAGTATATGCGAGGCCCTGGGTTTaGTCCCCAGCACTGCAGCAGCCAGATGGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: FPQDLVYARPWV*SPALQQPDGQL
Trigger: TAACTGCCCATCTGGCTGCTGCAGTGCTGGGGATCAAACCCAGGGCCTCGCATATACTAGGTCCTGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000123194.8
CDS GCA 72 bp ATTAGCATCTTGGACTCCAGTAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAGGACTATCTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: ISILDSSKCSDG*CGFPRQDYLSP
Trigger: GGGGGACAGATAGTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
CDS CCA 72 bp GCGTCGTCTGGATGGTCATTTCACCGCCCTGTAACGTaGCCCAGTTTTGTTCCACCTCTCCATCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: ASSGWSFHRPVT*PSFVPPLHQPQ
Trigger: CTGTGGCTGATGGAGAGGTGGAACAAAACTGGGCCACGTTACAGGGCGGTGAAATGACCATCCAGACGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 72 bp TTGGCCCATGGGATATCTTCTGGCCACCAGATAGGCTaGCAGCTTTCTTTCCCCCAGCCTGGTTTCCCCCGA +
Preference number: 6 (lower is better)
Translates to: LAHGISSGHQIG*QLSFPQPGFPR
Trigger: TCGGGGGAAACCAGGCTGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 72 bp GGTCCATGCATGAACTCCATCTGGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: GPCMNSIWAISI*DSSKCSDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCCAGATGGAGTTCATGCATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069808.13
ENSMUST00000115206.8
CDS GCA 72 bp CGTGGCTACATGGACCTGCTGGACTTGCTGGGCCACTaGATGGGCTTCTATGGTAGCCATGTGTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: RGYMDLLDLLGH*MGFYGSHVFSL
Trigger: CAAACTGAACACATGGCTACCATAGAAGCCCATGCAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000148990.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp CATAAAGAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: HKEAISILDSSK*SDGCCGFPRQD
Trigger: GTCCTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCTTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115208.8
ENSMUST00000132866.2
CDS CCA 72 bp CTCTTCTGTGCGGACATCACTGCGGACATTGGCCCATaGGATATCTTCTGGCCACCAGATAGGCTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LFCADITADIGP*DIFWPPDRLAA
Trigger: AGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp CCTCCACAGTCTGCCATAAAGAGGCCATTAGCATCTTaGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGTT +
Preference number: 6 (lower is better)
Translates to: PPQSAIKRPLAS*TPVSAPTAAAV
Trigger: AACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGACTGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115208.8
ENSMUST00000132866.2
CDS CAA 72 bp CGCACCACATTCTCCAAAGGTGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTGGAGGGTGAGATGCAG +
Preference number: 6 (lower is better)
Translates to: RTTFSKGAAPNT*KTGLGLEGEMQ
Trigger: CTGCATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTGGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 72 bp GTACCAACCTGGATGAGCGACACGGTGCCATCAGGGTaGCTGAAGGTCTGTACTACGGTCTGTGATGGTACG +
Preference number: 6 (lower is better)
Translates to: VPTWMSDTVPSG*LKVCTTVCDGT
Trigger: CGTACCATCACAGACCGTAGTACAGACCTTCAGCAACCCTGATGGCACCGTGTCGCTCATCCAGGTTGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 72 bp ACCTCCACAGTCTGCCATAAAGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCCGACGGCTGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: TSTVCHKEAISI*DSSKCSDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGACTGTGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115208.8
ENSMUST00000132866.2
CDS CAA 90 bp TTCTCCAAAGGTGCTGCGCCAAACACCTTGAAGACAGGGTTGGGTTaGGAGGGTGAGATGCAGAGTACAATCGCTTGCTGTCCCACTCGC +
Preference number: 6 (lower is better)
Translates to: FSKGAAPNTLKTGLG*EGEMQSTIACCPTR
Trigger: GCGAGTGGGACAGCAAGCGATTGTACTCTGCATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 72 bp CCAGATGGGCAGTTACCTCATCAGCTGCCGTGGAGTTaGGGATGTCCGAGTCATCATAAGAAGTGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: PDGQLPHQLPWS*GCPSHHKKCPR
Trigger: CCGAGGACACTTCTTATGATGACTCGGACATCCTCAACTCCACGGCAGCTGATGAGGTAACTGCCCATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 72 bp GCACCACATTCTCCAAAGGTGCTGCGCCAAACACCTTaGAGACAGGGTTGGGTTTGGAGGGTGAGATGCAGA +
Preference number: 6 (lower is better)
Translates to: APHSPKVLRQTP*RQGWVWRVRCR
Trigger: TCTGCATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp TTGGGTTTGGAGGGTGAGATGCAGAGTACAATCGCTTaGTGTCCCACTCGCGTCGTGTACTCATCCAACGTG +
Preference number: 6 (lower is better)
Translates to: LGLEGEMQSTIA*CPTRVVYSSNV
Trigger: CACGTTGGATGAGTACACGACGCGAGTGGGACAGCAAGCGATTGTACTCTGCATCTCACCCTCCAAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp CTTCATCAGCACTTAGCATACTGTGCTCAGTGTACGTaGCTACATGGACCTGCTGGACTTGCTGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: LHQHLAYCAQCT*LHGPAGLAGPL
Trigger: CAGTGGCCCAGCAAGTCCAGCAGGTCCATGTAGCCACGTACACTGAGCACAGTATGCTAAGTGCTGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp GACATCACTGCGGACATTGGCCCATGGGATATCTTCTaGCCACCAGATAGGCTTGCAGCTTTCTTTCCCCCA +
Preference number: 6 (lower is better)
Translates to: DITADIGPWDIF*PPDRLAAFFPP
Trigger: TGGGGGAAAGAAAGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 72 bp GCCAGAGCAGACTCGAGGTCTTCCAGGATCATGCTCTaGTACTTTCGCACCACATTCTCCAAAGGTGCTGCG +
Preference number: 6 (lower is better)
Translates to: ARADSRSSRIML*YFRTTFSKGAA
Trigger: CGCAGCACCTTTGGAGAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACCTCGAGTCTGCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 90 bp ACCACATTCTCCAAAGGTGCTGCGCCAAACACCTTGAAGACAGGGTaGGGTTTGGAGGGTGAGATGCAGAGTACAATCGCTTGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: TTFSKGAAPNTLKTG*GLEGEMQSTIACCP
Trigger: GGGACAGCAAGCGATTGTACTCTGCATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp GAGGAAGGGGAGTCTTCATCAGCACTTAGCATACTGTaGTCAGTGTACGTGGCTACATGGACCTGCTGGACT +
Preference number: 6 (lower is better)
Translates to: EEGESSSALSIL*SVYVATWTCWT
Trigger: AGTCCAGCAGGTCCATGTAGCCACGTACACTGAGCACAGTATGCTAAGTGCTGATGAAGACTCCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000133928.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 72 bp TGTTTTTGCTCTTCTGTGCGGACATCACTGCGGACATaGGCCCATGGGATATCTTCTGGCCACCAGATAGGC +
Preference number: 6 (lower is better)
Translates to: CFCSSVRTSLRT*AHGISSGHQIG
Trigger: GCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 90 bp GAAACCCTTTGTTTTTGCTCTTCTGTGCGGACATCACTGCGGACATaGGCCCATGGGATATCTTCTGGCCACCAGATAGGCTTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: ETLCFCSSVRTSLRT*AHGISSGHQIGLQL
Trigger: AAGCTGCAAGCCTATCTGGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 72 bp GCCATCAGGGTTGCTGAAGGTCTGTACTACGGTCTGTaGTGGTACGAGATGAGCTATACTGTGTGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: AIRVAEGLYYGL*WYEMSYTVCGG
Trigger: ACCACCACACACAGTATAGCTCATCTCGTACCATCACAGACCGTAGTACAGACCTTCAGCAACCCTGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp GTTCTGCCAGAGCAGACTCGAGGTCTTCCAGGATCATaGTCTTGTACTTTCGCACCACATTCTCCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: VLPEQTRGLPGS*SCTFAPHSPKV
Trigger: CACCTTTGGAGAATGTGGTGCGAAAGTACAAGAGCATGATCCTGGAAGACCTCGAGTCTGCTCTGGCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp AAACCCTTTGTTTTTGCTCTTCTGTGCGGACATCACTaGGGACATTGGCCCATGGGATATCTTCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: KPFVFALLCGHH*GHWPMGYLLAT
Trigger: GGTGGCCAGAAGATATCCCATGGGCCAATGTCCGCAGTGATGTCCGCACAGAAGAGCAAAAACAAAGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp TGGTTTCCCCCGACCTGTGGAATACTTGAGCATCTCTaGGATAAATGCCCGAAGCTGAGCCTGGGTCATTTT +
Preference number: 6 (lower is better)
Translates to: WFPPTCGILEHL*DKCPKLSLGHF
Trigger: AAAATGACCCAGGCTCAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTATTCCACAGGTCGGGGGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CAA 90 bp TTGTACTTTCGCACCACATTCTCCAAAGGTGCTGCGCCAAACACCTaGAAGACAGGGTTGGGTTTGGAGGGTGAGATGCAGAGTACAATC +
Preference number: 6 (lower is better)
Translates to: LYFRTTFSKGAAPNT*KTGLGLEGEMQSTI
Trigger: GATTGTACTCTGCATCTCACCCTCCAAACCCAACCCTGTCTTCAAGGTGTTTGGCGCAGCACCTTTGGAGAATGTGGTGCGAAAGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp CCTTCTTGCCAGGATCCACTTGTAACCTCCACAGTCTaGCATAAAGAGGCCATTAGCATCTTGGACTCCAGT +
Preference number: 6 (lower is better)
Translates to: PSCQDPLVTSTV*HKEAISILDSS
Trigger: ACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGACTGTGGAGGTTACAAGTGGATCCTGGCAAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115208.8
ENSMUST00000132866.2
CDS CCA 72 bp CGGTCTGTGATGGTACGAGATGAGCTATACTGTGTGTaGTGGTGGCCTGAGTTTGTGTTTGCTGATCTTCAA +
Preference number: 6 (lower is better)
Translates to: RSVMVRDELYCV*WWPEFVFADLQ
Trigger: TTGAAGATCAGCAAACACAAACTCAGGCCACCACCACACACAGTATAGCTCATCTCGTACCATCACAGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000132866.2
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS GCA 72 bp TCCAACGTGGCTCTGAGTTTCCGAAGCAAACGTGTCTaGTGTCTCTTTCGGATAGATGGATTAGACTCAAAC +
Preference number: 6 (lower is better)
Translates to: SNVALSFRSKRV*CLFRIDGLDSN
Trigger: GTTTGAGTCTAATCCATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCGGAAACTCAGAGCCACGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS CCA 72 bp CCGAAGCAAACGTGTCTGCTGTCTCTTTCGGATAGATaGATTAGACTCAAACACATGAGGCCGTTTCCGTTT +
Preference number: 6 (lower is better)
Translates to: PKQTCLLSLSDR*IRLKHMRPFPF
Trigger: AAACGGAAACGGCCTCATGTGTTTGAGTCTAATCCATCTATCCGAAAGAGACAGCAGACACGTTTGCTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000004761.13
ENSMUST00000069808.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8
ENSMUST00000115204.8
ENSMUST00000115206.8
ENSMUST00000115208.8
ENSMUST00000115209.8
ENSMUST00000115211.8
ENSMUST00000115212.8
ENSMUST00000123194.8
ENSMUST00000167972.9
ENSMUST00000170535.9
CDS TCA 72 bp TGTGATAATATTTCTGACATAAAAGCAGGGGCTGCCTaGGGTAGCAGGAGCCAACAGAATCCTTTCATTATT +
Preference number: 6 (lower is better)
Translates to: CDNISDIKAGAA*GSRSQQNPFII
Trigger: AATAATGAAAGGATTCTGTTGGCTCCTGCTACCTCAGGCAGCCCCTGCTTTTATGTCAGAAATATTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000004761.13
ENSMUST00000069831.15
ENSMUST00000115199.8
ENSMUST00000115200.8