Pregenerated sensors for NRBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075590Ensembl transcript IDs: ENSMUST00000019516.5, ENSMUST00000226444.2, ENSMUST00000227605.2, ENSMUST00000228366.3, ENSMUST00000228419.2
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGTGCTCTGGATCCCGGGCATGTTCCCTTGGTTCACCAGGGCTTaGGGCCAAAGGGATCCGAGGGCCTCCAGAGGCCAGGGCGTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: KVLWIPGMFPWFTRA*GQRDPRASRGQGVR Trigger: CCGGACGCCCTGGCCTCTGGAGGCCCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CCA 90 bp | AAACTGAGTGCAGACAGGATCTGCGTACACCAGCGCTTCCAGGCCTaGCAGCGGACGCACGACTCCGTCGGGTGGGCACCAAAAGGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: KLSADRICVHQRFQA*QRTHDSVGWAPKGC Trigger: GCAGCCTTTTGGTGCCCACCCGACGGAGTCGTGCGTCCGCTGCCAGGCCTGGAAGCGCTGGTGTACGCAGATCCTGTCTGCACTCAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CCA 90 bp | GTGTCCATGGCCAGAAAGGTGCTCTGGATCCCGGGCATGTTCCCTTaGTTCACCAGGGCTTGGGGCCAAAGGGATCCGAGGGCCTCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: VSMARKVLWIPGMFP*FTRAWGQRDPRASR Trigger: TCTGGAGGCCCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGCCATGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR TCA 90 bp | CAGGGCCTGTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTaGGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCC | + |
|
Preference number: 1 (lower is better) Translates to: QGLCSVPGNTGRRQL*AVWGLFAKWTTLSP Trigger: GGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACACAGGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR GCA 90 bp | AGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTaGCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTGGGCCGTC | + |
|
Preference number: 1 (lower is better) Translates to: REHRQKAALSSVGAL*QVDNPEPLYLCWAV Trigger: GACGGCCCAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR TCA 90 bp | GGCCAGGCAGGAGAGGATGAATTCCCGCATGTTGGGGTCACTCAGTaGGTGCCTGGCTCGAGCGATGGCCTCTTCTGTGACTCTGGTATC | + |
|
Preference number: 1 (lower is better) Translates to: GQAGEDEFPHVGVTQ*VPGSSDGLFCDSGI Trigger: GATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAACATGCGGGAATTCATCCTCTCCTGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 90 bp | AGGCAGGAGAGGATGAATTCCCGCATGTTGGGGTCACTCAGTGAGTaGCTGGCTCGAGCGATGGCCTCTTCTGTGACTCTGGTATCCCCG | + |
|
Preference number: 1 (lower is better) Translates to: RQERMNSRMLGSLSE*LARAMASSVTLVSP Trigger: CGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAACATGCGGGAATTCATCCTCTCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 90 bp | GCCCCTGTATCTCTGCTGGGCCGTCAGGACTGGGAAGGTCACGCTTaGGTCCCTCGGTACTTGAGAAAAGTGGTCTCCAGAAAGGCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: APVSLLGRQDWEGHA*VPRYLRKVVSRKAA Trigger: AGCAGCCTTTCTGGAGACCACTTTTCTCAAGTACCGAGGGACGCAAGCGTGACCTTCCCAGTCCTGACGGCCCAGCAGAGATACAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR TCA 90 bp | TGGGGTCACTCAGTGAGTGCCTGGCTCGAGCGATGGCCTCTTCTGTaGCTCTGGTATCCCCGTTGGCTTGGATCTCGAGTACAGCCATCT | + |
|
Preference number: 1 (lower is better) Translates to: WGHSVSAWLERWPLL*LWYPRWLGSRVQPS Trigger: AGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 90 bp | AGCTGCCGATGTAGCCGGTCCTCAAGCACCAAGAGCAGAGTAAGGTaGCACCGAGCCTTGTCCTCGCTTCTTTCCAGGTTGCACTGCATC | + |
|
Preference number: 1 (lower is better) Translates to: SCRCSRSSSTKSRVR*HRALSSLLSRLHCI Trigger: GATGCAGTGCAACCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTTGGTGCTTGAGGACCGGCTACATCGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 90 bp | GCTCGAGCGATGGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTaGATCTCGAGTACAGCCATCTCCAGTGCACACATCCCGAAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: ARAMASSVTLVSPLA*ISSTAISSAHIPKE Trigger: CTCCTTCGGGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR TCA 90 bp | AACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATaGCAGCAGAAGGAACTGCGCAGGTGTGGTTCATCTATAGACCCT | + |
|
Preference number: 1 (lower is better) Translates to: NTHRPRLFSKHQSPG*QQKELRRCGSSIDP Trigger: AGGGTCTATAGATGAACCACACCTGCGCAGTTCCTTCTGCTGTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR GCA 90 bp | TACTTGTGCAGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTaGTCAAACATGGTCTGGATCTTCTCCTCATGGGCCGCAAAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: YLCSLTMLGWSTSAS*SNMVWIFSSWAAKA Trigger: GGCCTTTGCGGCCCATGAGGAGAAGATCCAGACCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR TCA 90 bp | TCTACCACATTCTCAGGCATGAGGTACTGGTGCTGGATGAAGCAGTaGGCTGCCAGCAGCTTCAGCGAGTGCACCTCAAAGAGCACTCGG | + |
|
Preference number: 1 (lower is better) Translates to: STTFSGMRYWCWMKQ*AASSFSECTSKSTR Trigger: CCGAGTGCTCTTTGAGGTGCACTCGCTGAAGCTGCTGGCAGCTCACTGCTTCATCCAGCACCAGTACCTCATGCCTGAGAATGTGGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR TCA 90 bp | TGGATCTTCTCCTCATGGGCCGCAAAGGCCTTCCTATCCCCGAAGTaGAGTTCGTTCCACACCACTTCTACACCCTCCTCCGTGTCCATG | + |
|
Preference number: 1 (lower is better) Translates to: WIFSSWAAKAFLSPK*SSFHTTSTPSSVSM Trigger: CATGGACACGGAGGAGGGTGTAGAAGTGGTGTGGAACGAACTTCACTTCGGGGATAGGAAGGCCTTTGCGGCCCATGAGGAGAAGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR GCA 90 bp | CACATTCTCAGGCATGAGGTACTGGTGCTGGATGAAGCAGTGAGCTaGCAGCAGCTTCAGCGAGTGCACCTCAAAGAGCACTCGGTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: HILRHEVLVLDEAVS*QQLQRVHLKEHSVE Trigger: TTCCACCGAGTGCTCTTTGAGGTGCACTCGCTGAAGCTGCTGGCAGCTCACTGCTTCATCCAGCACCAGTACCTCATGCCTGAGAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 90 bp | AGTGAAGTTCGTTCCACACCACTTCTACACCCTCCTCCGTGTCCATaGCCAGAAAGGTGCTCTGGATCCCGGGCATGTTCCCTTGGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: SEVRSTPLLHPPPCP*PERCSGSRACSLGS Trigger: TGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGCCATGGACACGGAGGAGGGTGTAGAAGTGGTGTGGAACGAACTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CCA 90 bp | TCAGAGGCGTCCAGCCAATACTTGTGCAGCTTGACGATGTTGGGATaGTCCACCAGCGCCAGCTGCTCAAACATGGTCTGGATCTTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: SEASSQYLCSLTMLG*STSASCSNMVWIFS Trigger: GGAGAAGATCCAGACCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR GCA 90 bp | ACAGCAGTCCCATCATTGACTTCGCCATACTCTGGTGGGAAAAAGTaGAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: TAVPSLTSPYSGGKK*RFRSSSRSARIGLR Trigger: CCGGAGCCCTATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAATGATGGGACTGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CCA 90 bp | GGAAGCGTTCATCAGGACTTTGAAACCAGTAAGAAAGAGACAAGTTaGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAACTC | + |
|
Preference number: 1 (lower is better) Translates to: GSVHQDFETSKKETS*AGEKEGARNPHPQL Trigger: GAGTTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTTCTTACTGGTTTCAAAGTCCTGATGAACGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 90 bp | GAAGATGTCCACAGCAGTCCCATCATTGACTTCGCCATACTCTGGTaGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAAT | + |
|
Preference number: 1 (lower is better) Translates to: EDVHSSPIIDFAILW*EKVQVSEFFPFSSN Trigger: ATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAATGATGGGACTGCTGTGGACATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CCA 90 bp | CCCATGACAAATCTGTTTTATTTTAGGTCTTGGTTTCGGTTAAGATaGCATGGTAGGTACCACAGTAACAACACCCACCGCCCACGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: PMTNLFYFRSWFRLR*HGRYHSNNTHRPRL Trigger: CAGCCGTGGGCGGTGGGTGTTGTTACTGTGGTACCTACCATGCCATCTTAACCGAAACCAAGACCTAAAATAAAACAGATTTGTCATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CAA 90 bp | AAAGGTGCTCTGGATCCCGGGCATGTTCCCTTGGTTCACCAGGGCTaGGGGCCAAAGGGATCCGAGGGCCTCCAGAGGCCAGGGCGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: KGALDPGHVPLVHQG*GPKGSEGLQRPGRP Trigger: CGGACGCCCTGGCCTCTGGAGGCCCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CAA 90 bp | CGTGTCCATGGCCAGAAAGGTGCTCTGGATCCCGGGCATGTTCCCTaGGTTCACCAGGGCTTGGGGCCAAAGGGATCCGAGGGCCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RVHGQKGALDPGHVP*VHQGLGPKGSEGLQ Trigger: CTGGAGGCCCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGCCATGGACACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGGAGGCACCAAAAGGCTGCTaGGCCTGCGGAGCCCGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: EKVQVSEFFPFSSNRAPEAPKGC*ACGARP Trigger: CGGGCGGGCTCCGCAGGCTCAGCAGCCTTTTGGTGC...CTCCGGAGCCCTATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTTGGATCTCGAGTACAGCCATCTCCAGTGCACACATCCCGAAGGAGAAGGCACCAAAAGGCTGCTaGGCCTGCGGAGCCCGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: LAWISSTAISSAHIPKEKAPKGC*ACGARP Trigger: CGGGCGGGCTCCGCAGGCTCAGCAGCCTTTTGGTGC...CTTCTCCTTCGGGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGACCTCTGAGTACCGCCACTGCATTGGGGGTCCATGGGGCTGCGGCATCTGGTACTGGTGCTGGATaGAGCAGTGAGCTGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RRPLSTATALGVHGAAASGTGAG*SSELPA Trigger: TGCTGGCAGCTCACTGCTTCATCCAGCACCAGTACC...AGATGCCGCAGCCCCATGGACCCCCAATGCAGTGGCGGTACTCAGAGGTCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTGGATCTCGAGTACAGCCATCCAGCGCTTCCAGGCCTaGCAGCGGACGCACGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: ASSVTLVSPLAWISSTAIQRFQA*QRTHDS Trigger: GGAGTCGTGCGTCCGCTGCCAGGCCTGGAAGCGCTG...GATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTGGATCTCGAGTACAGCCATCAGCGCTTCCAGGCCTaGCAGCGGACGCACGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: GLFCDSGIPVGLDLEYSHQRFQA*QRTHDS Trigger: GGAGTCGTGCGTCCGCTGCCAGGCCTGGAAGCGCTG...ATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CAA 90 bp | GCAGGGCCTGTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTaGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: AGPVFSSREHRQKAA*SSVGALCQVDNPEP Trigger: GGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACACAGGCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTAGGATGCCTGACCCCTaGGCCCCTAGGCCAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSREHRQKAALSSVGALRMPDP*APRPEG Trigger: TCCCTCTGGCCTAGGGGCTCAGGGGTCAGGCATCCT...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACGTTGGGGTCACTCAGTaGGTGCCTGGCTCGAGCGAT | + |
|
Preference number: 2 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDVGVTQ*VPGSSD Trigger: ATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAAC...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CAA 90 bp | TGCCTGGCTCGAGCGATGGCCTCTTCTGTGACTCTGGTATCCCCGTaGGCTTGGATCTCGAGTACAGCCATCTCCAGTGCACACATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: CLARAMASSVTLVSP*AWISSTAISSAHIP Trigger: CGGGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CAA 90 bp | AGCCCCTGTATCTCTGCTGGGCCGTCAGGACTGGGAAGGTCACGCTaGCGTCCCTCGGTACTTGAGAAAAGTGGTCTCCAGAAAGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SPCISAGPSGLGRSR*RPSVLEKSGLQKGC Trigger: GCAGCCTTTCTGGAGACCACTTTTCTCAAGTACCGAGGGACGCAAGCGTGACCTTCCCAGTCCTGACGGCCCAGCAGAGATACAGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CAA 90 bp | CGGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTTGACGATGTaGGGATGGTCCACCAGCGCCAGCTGCTCAAACATGGTCTGGATC | + |
|
Preference number: 2 (lower is better) Translates to: RASEASSQYLCSLTM*GWSTSASCSNMVWI Trigger: GATCCAGACCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCCCAAGTGGACAACCCTaGGCCCCTGTATCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GGSNLLTKGPNSSQQWQAPSGQP*APVSLL Trigger: CAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGG...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAAAGGATGCCTGACCCCTaGGCCCCTAGGCCAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KETSWAGEKEGARNPHPQRMPDP*APRPEG Trigger: TCCCTCTGGCCTAGGGGCTCAGGGGTCAGGCATCCT...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACAGGTCAGGTCTGGTCTaGCTGATGCCCAGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDRSGLV*LMPSTV Trigger: CACAGTGCTGGGCATCAGGCAGACCAGACCTGACCT...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGAGCAGCTTCAGCGAGTaGACCTCAAAGAGCACTCGG | + |
|
Preference number: 2 (lower is better) Translates to: AALSSVGALCQVDNPEPLSSFSE*TSKSTR Trigger: CCGAGTGCTCTTTGAGGTGCACTCGCTGAAGCTGCT...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGGATGAAGCAGTGAGCTaGCAGCAGCTTCAGCGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AALSSVGALCQVDNPEPLDEAVS*QQLQRV Trigger: CACTCGCTGAAGCTGCTGGCAGCTCACTGCTTCATC...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCAAACATGGTCTGGTGGTTCACCAGGGCTTaGGGCCAAAGGGATCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLTMLGWSTSASCSNMVWWFTRA*GQRDPR Trigger: CCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCA...CCAGACCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CAA 90 bp | GGCTCGAGCGATGGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTaGGATCTCGAGTACAGCCATCTCCAGTGCACACATCCCGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GSSDGLFCDSGIPVG*DLEYSHLQCTHPEG Trigger: TCCTTCGGGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CAA 90 bp | AGCCGGTCCTCAAGCACCAAGAGCAGAGTAAGGTGCCACCGAGCCTaGTCCTCGCTTCTTTCCAGGTTGCACTGCATCTGGACCACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SRSSSTKSRVRCHRA*SSLLSRLHCIWTTF Trigger: GAAGGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTTGGTGCTTGAGGACCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGCACCAAAGCCCAGGATaGCAGCAGAAGGAACTGCGC | + |
|
Preference number: 2 (lower is better) Translates to: WVQPTHKRPQLFPAVASQHQSPG*QQKELR Trigger: GCGCAGTTCCTTCTGCTGTCATCCTGGGCTTTGGTG...CTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGTCTGCAAGGGATCAGGACTGGTCTGAGCAGGACCAAGGAATTCCCTGGCCAAGGTCAGGTCTGGTCTaGCTGATGCCCAGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RSARDQDWSEQDQGIPWPRSGLV*LMPSTV Trigger: CACAGTGCTGGGCATCAGGCAGACCAGACCTGACCT...TGGCCAGGGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCCCTTGCAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTAGGTCAGGTCTGGTCTaGCTGATGCCCAGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VFSSREHRQKAALSSVGARSGLV*LMPSTV Trigger: CACAGTGCTGGGCATCAGGCAGACCAGACCTGACCT...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGGGCTCAAGGCAGGTCTaGAAGGGATCAGGACTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PKGFGEDTGPGLKSVEDQGSRQV*KGSGLV Trigger: GACCAGTCCTGATCCCTTGCAGACCTGCCTTGAGCC...CTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGGGCTCAAGGCAGGTCTaGAAGGGATCAGGACTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: WVQPTHKRPQLFPAVASQGSRQV*KGSGLV Trigger: GACCAGTCCTGATCCCTTGCAGACCTGCCTTGAGCC...CTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTACTGCTGCAGAAAGCTaGGGGGTGGGGGTGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VFSSREHRQKAALSSVGATAAES*GVGVSS Trigger: TGAAGACACCCCCACCCCCCAGCTTTCTGCAGCAGT...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACAACTCTTCCCAGCAGTaGCAAGCCAGTCAGCTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TKGPNSSQQWQASQLAQDNSSQQ*QASQLA Trigger: GGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTT...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTGGATCTTCTCCTCATGGGCCGCAAAGGCCTTCCTATCCCCGAAGTGAAGGCCAGAAAGGTGCTCTaGATCCCGGGCATGTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GLDLLLMGRKGLPIPEVKARKVL*IPGMFP Trigger: AGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGC...CTTCACTTCGGGGATAGGAAGGCCTTTGCGGCCCATGAGGAGAAGATCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGGGTTTCTATGCCACCTaGAGGCATGGCTGTTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: AALSSVGALCQVDNPEPLGFYAT*RHGCCL Trigger: TAGACAACAGCCATGCCTTCAGGTGGCATAGAAACC...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACGGCCATTGTGCTGAATaGAGATGGTGTCGCTCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TKGPNSSQQWQASQLAQDGHCAE*RWCRSS Trigger: TGACGAGCGACACCATCTTCATTCAGCACAATGGCC...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGGACCAAGGAATTCCCTaGCCATGGGTTCAACTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AALSSVGALCQVDNPEPLDQGIP*PWVQLQ Trigger: TTGGAGTTGAACCCATGGCCAGGGAATTCCTTGGTC...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGATCCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGCAGCACTGTGACACCTaGGTTCAGGCTCCTTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: ERSFPRALGRTQVLVSRVQHCDT*VQAPSL Trigger: TAGGGAAGGAGCCTGAACTCAGGTGTCACAGTGCTG...CACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGGATCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACGACAGCAGAAGGAACTaGGCAGGTGTGGTTCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: TKGPNSSQQWQASQLAQDDSRRN*AGVVHL Trigger: TAGATGAACCACACCTGCGCAGTTCCTTCTGCTGTC...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGTGCCTGGCTCGAGCGATGGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTCTGGTGGGAAAAAGTaGAGGTTTCGGAGTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ECLARAMASSVTLVSPLASGGKK*RFRSSS Trigger: GGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGA...AGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGGGAGGACACAGGTCCTaGTCTCAAGAGTGTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: WVQPTHKRPQLFPAVASQGGHRS*SQECGR Trigger: TCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCC...CTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGACCAAGTGGACAACCCTaGGCCCCTGTATCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RNPHPQLKHTTSPGRECGPSGQP*APVSLL Trigger: CAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGG...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAAGAGCAGCACTGTGACACCTaGGTTCAGGCTCCTTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: GFGEDTGPGLKSVEDQKEQHCDT*VQAPSL Trigger: TAGGGAAGGAGCCTGAACTCAGGTGTCACAGTGCTG...CTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGAATTTGTCCAGCTCCAAGAAGGAGACCTCTGAGTACCGCCACTGCATTGGGGGATCAGGACTGGTCTaGGCAGGACCAAGGAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: RNLSSSKKETSEYRHCIGGSGLV*AGPRNS Trigger: GGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCC...CCCAATGCAGTGGCGGTACTCAGAGGTCTCCTTCTTGGAGCTGGACAAATTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAAGGATCAGGACTGGTCTaGGCAGGACCAAGGAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: KETSWAGEKEGARNPHPQGSGLV*AGPRNS Trigger: GGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCC...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCGTTCAGCTCGAATAGGGCTCCGGAGATCATCAGGAAGTGCATTGGAGAAACTGCTGCAGAAAGCTaGGGGGTGGGGGTGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FPFSSNRAPEIIRKCIGETAAES*GVGVSS Trigger: TGAAGACACCCCCACCCCCCAGCTTTCTGCAGCAGT...TTCTCCAATGCACTTCCTGATGATCTCCGGAGCCCTATTCGAGCTGAACGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAAGAGAGAGACAAGTTGGGCTaGGGAGAAAGAGGGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GFGEDTGPGLKSVEDQKERDKLG*GERGSQ Trigger: CTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCT...CTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGAAAGGGTTCTGGCGTTaGAGTTTTGGCCTTTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: WVQPTHKRPQLFPAVASQKGFWR*SFGLLG Trigger: GCCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTT...CTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGACTTCGCCATACTCTGGTGGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTCCAAGTGGACAACCCTaGGCCCCTGTATCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTSPYSGGKKCRFRSSSRPSGQP*APVSLL Trigger: CAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGG...ACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGATCCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGGGTTTCTATGCCACCTaGAGGCATGGCTGTTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ERSFPRALGRTQVLVSRVGFYAT*RHGCCL Trigger: TAGACAACAGCCATGCCTTCAGGTGGCATAGAAACC...CACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGGATCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTTCCCTAGGTTTCTATaGCACCTGAAGGCATGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FSSREHRQKAALSSVGALFPRFL*HLKAWL Trigger: CAGCCATGCCTTCAGGTGGCATAGAAACCTAGGGAA...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCGCCATACTCTGGTGGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCAGTGCAGACAGGATCTaGGTACACCAGCGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FAILWWEKVQVSEFFPFSSADRI*VHQRFQ Trigger: CTGGAAGCGCTGGTGTACGCAGATCCTGTCTGCACT...GCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGATGGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTGGATCTCGAGTACATGCCACCTGAAGGCATaGCTGTTGTCTAGTACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: AMASSVTLVSPLAWISSTCHLKA*LLSSTR Trigger: TCTGGTACTAGACAACAGCCATGCCTTCAGGTGGCA...TGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTGGTCTCAAGAGTGTaGAAGATCAGAAAGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VFSSREHRQKAALSSVGALVSRV*KIRKRA Trigger: AGCCCTCTTTCTGATCTTCCACACTCTTGAGACCAG...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGTGCCACCTGAAGGCATaGCTGTTGTCTAGTACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QEPTSSTQTHNFPREGMWCHLKA*LLSSTR Trigger: TCTGGTACTAGACAACAGCCATGCCTTCAGGTGGCA...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACAGAACTAAGAAAAGTTaGTGGCCTCTAGAAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDRTKKS*WPLEAE Trigger: CTCAGCTTCTAGAGGCCACCAACTTTTCTTAGTTCT...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGAACTAAGAAAAGTTaGTGGCCTCTAGAAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GGSNLLTKGPNSSQQWQARTKKS*WPLEAE Trigger: CTCAGCTTCTAGAGGCCACCAACTTTTCTTAGTTCT...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGGCATCAGGAAGTGCATTaGAGAAGATGCGGTACCACA | + |
|
Preference number: 2 (lower is better) Translates to: GKKCRFRSSSRSARIGLRHQEVH*RRCGTT Trigger: TGTGGTACCGCATCTTCTCCAATGCACTTCCTGATG...CCGGAGCCCTATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTTTAGTTGGCAGCTGTTaGGAAAATAGGGATTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VFSSREHRQKAALSSVGALVGSC*ENRDFC Trigger: GCAGAAATCCCTATTTTCTCAACAGCTGCCAACTAA...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCATCAGGAAGTGCATTGGAGAAGATGCGGTACCACACGGAGCCGATCTTGATGGCCATTGTGCTGAATaGAGATGGTGTCGCTCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: IIRKCIGEDAVPHGADLDGHCAE*RWCRSS Trigger: TGACGAGCGACACCATCTTCATTCAGCACAATGGCC...ATCAAGATCGGCTCCGTGTGGTACCGCATCTTCTCCAATGCACTTCCTGATGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGATTCCCTAGGTTTCTATaGCACCTGAAGGCATGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RNPHPQLKHTTSPGRECGFPRFL*HLKAWL Trigger: CAGCCATGCCTTCAGGTGGCATAGAAACCTAGGGAA...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAAGAGTCTGGTGGGAAAAAGTaGAGGTTTCGGAGTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GFGEDTGPGLKSVEDQKESGGKK*RFRSSS Trigger: GGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGA...CTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGAGACCAAGGAATTCCCTaGCCATGGGTTCAACTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RNPHPQLKHTTSPGRECGDQGIP*PWVQLQ Trigger: TTGGAGTTGAACCCATGGCCAGGGAATTCCTTGGTC...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTACTAAGAAAAGTTGGTaGCCTCTAGAAGCTGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSSREHRQKAALSSVGALTKKSW*PLEAER Trigger: CCTCTCAGCTTCTAGAGGCCACCAACTTTTCTTAGT...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGGAGATCATCAGGAAGTGCATTCATCAGGAAGTGCATTaGAGAAGATGCGGTACCACA | + |
|
Preference number: 2 (lower is better) Translates to: EFFPFSSNRAPEIIRKCIHQEVH*RRCGTT Trigger: TGTGGTACCGCATCTTCTCCAATGCACTTCCTGATG...AATGCACTTCCTGATGATCTCCGGAGCCCTATTCGAGCTGAACGGGAAGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAAAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTGGATCACACTTGACCAAGGAATTCCCTaGCCATGGGTTCAACTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SRKELSLGINLVRAWITLDQGIP*PWVQLQ Trigger: TTGGAGTTGAACCCATGGCCAGGGAATTCCTTGGTC...AAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTTTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCACTGGGTTTATGATATCTGTTAACAGCAGCAATGTGGAACTATTCCTAATAAAACCAGGGTGGCTCTaGGGGGAAGCGTTCATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TTGFMISVNSSNVELFLIKPGWL*GEAFIR Trigger: CCTGATGAACGCTTCCCCTCAGAGCCACCCTGGTTT...TATTAGGAATAGTTCCACATTGCTGCTGTTAACAGATATCATAAACCCAGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGAACTATTCCTAATACAATAGTGAGCTTTCCTGGTTTCATACACAAAGTGACTGCTGCAGAAAGCTaGGGGGTGGGGGTGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: CGTIPNTIVSFPGFIHKVTAAES*GVGVSS Trigger: TGAAGACACCCCCACCCCCCAGCTTTCTGCAGCAGT...CACTTTGTGTATGAAACCAGGAAAGCTCACTATTGTATTAGGAATAGTTCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCCATGACAAATCTGTTTTATTTTAGGTCTTGGTTTCGGTTAAGATGGCATTGGGAAGGTCACGCTTaGGTCCCTCGGTACTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: CPMTNLFYFRSWFRLRWHWEGHA*VPRYLR Trigger: TCTCAAGTACCGAGGGACGCAAGCGTGACCTTCCCA...ATGCCATCTTAACCGAAACCAAGACCTAAAATAAAACAGATTTGTCATGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCCATGACAAATCTGTTTTATTTTAGGTCTTGGTTTCGGTTAAGATGGCATTTAGTTGGCAGCTGTTaGGAAAATAGGGATTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CPMTNLFYFRSWFRLRWHLVGSC*ENRDFC Trigger: GCAGAAATCCCTATTTTCTCAACAGCTGCCAACTAA...ATGCCATCTTAACCGAAACCAAGACCTAAAATAAAACAGATTTGTCATGGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 72 bp | GCAGACAGGATCTGCGTACACCAGCGCTTCCAGGCCTaGCAGCGGACGCACGACTCCGTCGGGTGGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: ADRICVHQRFQA*QRTHDSVGWAP Trigger: TGGTGCCCACCCGACGGAGTCGTGCGTCCGCTGCCAGGCCTGGAAGCGCTGGTGTACGCAGATCCTGTCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | TGCACCTCAAAGAGCACTCGGTGGAAGAGGAGGTTGTaGGCTGAGGGTCGGCGGGCAGGGTCCCGGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTSKSTRWKRRL*AEGRRAGSRAR Trigger: CCTGGCCCGGGACCCTGCCCGCCGACCCTCAGCCCACAACCTCCTCTTCCACCGAGTGCTCTTTGAGGTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | TGGATCCCGGGCATGTTCCCTTGGTTCACCAGGGCTTaGGGCCAAAGGGATCCGAGGGCCTCCAGAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WIPGMFPWFTRA*GQRDPRASRGQ Trigger: CTGGCCTCTGGAGGCCCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR TCA 72 bp | GAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTaGGCCCCTGTATCTCTGCTGGGCCGTCAGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: EQCGGSLPSGQP*APVSLLGRQDW Trigger: CCAGTCCTGACGGCCCAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR GCA 72 bp | TCCAGCTCCAAGAAGGAGACCTCTGAGTACCGCCACTaGATTGGGGGTCCATGGGGCTGCGGCATCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSKKETSEYRH*IGGPWGCGISA Trigger: GGCTGAGATGCCGCAGCCCCATGGACCCCCAATGCAGTGGCGGTACTCAGAGGTCTCCTTCTTGGAGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | AGCAGCTTCAGCGAGTGCACCTCAAAGAGCACTCGGTaGAAGAGGAGGTTGTGGGCTGAGGGTCGGCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSFSECTSKSTR*KRRLWAEGRRA Trigger: TGCCCGCCGACCCTCAGCCCACAACCTCCTCTTCCACCGAGTGCTCTTTGAGGTGCACTCGCTGAAGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | TGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTaGGCCGTCAGGACTGGGAAGGTCACGCTTGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CQVDNPEPLYLC*AVRTGKVTLAS Trigger: GGACGCAAGCGTGACCTTCCCAGTCCTGACGGCCCAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | GCCAGAAAGGTGCTCTGGATCCCGGGCATGTTCCCTTaGTTCACCAGGGCTTGGGGCCAAAGGGATCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARKVLWIPGMFP*FTRAWGQRDPR Trigger: CCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGACCTCTGAGTACCGCCACTGCATTGGGGGTCCATGGGGCTGCGGCATCTAGGCAGAAGGCAGCTTaGAGCAGTGTGGGGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RRPLSTATALGVHGAAASRQKAA*SSVGAL Trigger: AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCT...AGATGCCGCAGCCCCATGGACCCCCAATGCAGTGGCGGTACTCAGAGGTCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR TCA 72 bp | GGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTTaGCGATGTTGGGATGGTCCACCAGCGCCAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPQRRPANTCAA*RCWDGPPAPAA Trigger: AGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR GCA 72 bp | CTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTaGTGGGCCGTCAGGACTGGGAAGGTCACGCTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: LCQVDNPEPLYL*WAVRTGKVTLA Trigger: CGCAAGCGTGACCTTCCCAGTCCTGACGGCCCAGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | GAGACCTCTGAGTACCGCCACTGCATTGGGGGTCCATaGGGCTGCGGCATCTCAGCCAAAACTGCATGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETSEYRHCIGGP*GCGISAKTAWR Trigger: CCTCCATGCAGTTTTGGCTGAGATGCCGCAGCCCCATGGACCCCCAATGCAGTGGCGGTACTCAGAGGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACAGGTGCCACCGAGCCTaGTCCTCGCTTCTTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDRCHRA*SSLLSR Trigger: CCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCT...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGGCGTCCAGCCAATACTTGTGCAGCTTGACGATGTTGGGATGGTCCACCCCGGGCATGTTCCCTaGGTTCACCAGGGCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRGVQPILVQLDDVGMVHPGHVP*VHQGLG Trigger: CCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGG...GTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CCA 72 bp | CGTTCCACACCACTTCTACACCCTCCTCCGTGTCCATaGCCAGAAAGGTGCTCTGGATCCCGGGCATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSTPLLHPPPCP*PERCSGSRACS Trigger: GGAACATGCCCGGGATCCAGAGCACCTTTCTGGCCATGGACACGGAGGAGGGTGTAGAAGTGGTGTGGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTCTGCAAGGGATCAGGACTGGTCTGAGCAGGACCAAGGAATTCCCTGGCAGGCAGAAGGCAGCTTaGAGCAGTGTGGGGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGLQGIRTGLSRTKEFPGRQKAA*SSVGAL Trigger: AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCT...GCCAGGGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCCCTTGCAGACCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR TCA 72 bp | CGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATaGCAGCAGAAGGAACTGCGCAGGTGTGGTTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RPRLFSKHQSPG*QQKELRRCGSS Trigger: AGATGAACCACACCTGCGCAGTTCCTTCTGCTGTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR GCA 72 bp | AGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTaGCAAGTGGACAACCCTGAGCCCCTGTATCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RQKAALSSVGAL*QVDNPEPLYLC Trigger: GCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR GCA 72 bp | TCTCTGCTGGGCCGTCAGGACTGGGAAGGTCACGCTTaGGTCCCTCGGTACTTGAGAAAAGTGGTCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLLGRQDWEGHA*VPRYLRKVVSR Trigger: TCTGGAGACCACTTTTCTCAAGTACCGAGGGACGCAAGCGTGACCTTCCCAGTCCTGACGGCCCAGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGATCCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGAGGCAGAAGGCAGCTTaGAGCAGTGTGGGGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ERSFPRALGRTQVLVSRVRQKAA*SSVGAL Trigger: AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCT...CACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGGATCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR TCA 72 bp | CTGTTGTCTAGTACCAGATGGAGCGGTTCCCCTAACTaGCCTGTATCCACTCTCGTCCAGGCTCAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSSTRWSGSPN*PVSTLVQAQGS Trigger: GGAGCCCTGAGCCTGGACGAGAGTGGATACAGGTCAGTTAGGGGAACCGCTCCATCTGGTACTAGACAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR TCA 72 bp | AGGTCTGGTCTGCCTGATGCCCAGCACTGTGACACCTaGGTTCAGGCTCCTTCCCTAGGTTTCTATGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RSGLPDAQHCDT*VQAPSLGFYAT Trigger: GGTGGCATAGAAACCTAGGGAAGGAGCCTGAACTCAGGTGTCACAGTGCTGGGCATCAGGCAGACCAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR TCA 72 bp | TCAGTGAGTGCCTGGCTCGAGCGATGGCCTCTTCTGTaGCTCTGGTATCCCCGTTGGCTTGGATCTCGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVSAWLERWPLL*LWYPRWLGSRV Trigger: TACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR TCA 72 bp | TCCTCATGGGCCGCAAAGGCCTTCCTATCCCCGAAGTaGAGTTCGTTCCACACCACTTCTACACCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSWAAKAFLSPK*SSFHTTSTPSS Trigger: GGAGGAGGGTGTAGAAGTGGTGTGGAACGAACTTCACTTCGGGGATAGGAAGGCCTTTGCGGCCCATGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR GCA 72 bp | AGGATGAATTCCCGCATGTTGGGGTCACTCAGTGAGTaGCTGGCTCGAGCGATGGCCTCTTCTGTGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RMNSRMLGSLSE*LARAMASSVTL Trigger: CAGAGTCACAGAAGAGGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAACATGCGGGAATTCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 72 bp | AGGCATGAGGTACTGGTGCTGGATGAAGCAGTGAGCTaGCAGCAGCTTCAGCGAGTGCACCTCAAAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RHEVLVLDEAVS*QQLQRVHLKEH Trigger: GTGCTCTTTGAGGTGCACTCGCTGAAGCTGCTGGCAGCTCACTGCTTCATCCAGCACCAGTACCTCATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 72 bp | CACCGAGCCTTGTCCTCGCTTCTTTCCAGGTTGCACTaGATCTGGACCACCTTCCTGGTCTCCGAGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HRALSSLLSRLH*IWTTFLVSESK Trigger: CTTTGACTCGGAGACCAGGAAGGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCGAGGACAAGGCTCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 72 bp | TGTAGCCGGTCCTCAAGCACCAAGAGCAGAGTAAGGTaGCACCGAGCCTTGTCCTCGCTTCTTTCCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CSRSSSTKSRVR*HRALSSLLSRL Trigger: CAACCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTTGGTGCTTGAGGACCGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR GCA 72 bp | AGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTaGTCAAACATGGTCTGGATCTTCTCCTCATGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLTMLGWSTSAS*SNMVWIFSSWA Trigger: GGCCCATGAGGAGAAGATCCAGACCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CCA 72 bp | CTGGACCACCTTCCTGGTCTCCGAGTCAAAGGGTTCTaGCGTTGGAGTTTTGGCCTTTTGGGCTTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LDHLPGLRVKGF*RWSFGLLGFLW Trigger: CCAGAGGAAGCCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTTGACTCGGAGACCAGGAAGGTGGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGACTGAAGGCATGGCTGTaGTCTAGTACCAGATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSQGLWGGHRSWSQECGRLKAWL*SSTRWS Trigger: GCTCCATCTGGTACTAGACAACAGCCATGCCTTCAG...TCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTGAAGGCATGGCTGTaGTCTAGTACCAGATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFSSREHRQKAALSSVGALKAWL*SSTRWS Trigger: GCTCCATCTGGTACTAGACAACAGCCATGCCTTCAG...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACCGTTTAAGACCTGGTTaGAAGTTGGGAGAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDRLRPG*KLGERQ Trigger: CTGCCTCTCTCCCAACTTCAAACCAGGTCTTAAACG...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGGAGCCTGGATCACACTaGATGTACAGAACTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AALSSVGALCQVDNPEPLEPGSH*MYRTLS Trigger: AGAGAGAGTTCTGTACATCAAGTGTGATCCAGGCTC...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGAGTTCTGCCAATAGCTaGAAGGAGCAGGAGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AALSSVGALCQVDNPEPLSSANS*KEQEVS Trigger: ACTTACCTCCTGCTCCTTCAAGCTATTGGCAGAACT...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 72 bp | GATCCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTaGTCTCAAGAGTGTGGAAGATCAGAAAGAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DPSQGLWGGHRS*SQECGRSERGL Trigger: GAGCCCTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACGAGCCTGGATCACACTaGATGTACAGAACTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TKGPNSSQQWQASQLAQDEPGSH*MYRTLS Trigger: AGAGAGAGTTCTGTACATCAAGTGTGATCCAGGCTC...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACAGTTCTGCCAATAGCTaGAAGGAGCAGGAGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TKGPNSSQQWQASQLAQDSSANS*KEQEVS Trigger: ACTTACCTCCTGCTCCTTCAAGCTATTGGCAGAACT...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 72 bp | ATGGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTaGATCTCGAGTACAGCCATCTCCAGTGCACACATC | + |
|
Preference number: 3 (lower is better) Translates to: MASSVTLVSPLA*ISSTAISSAHI Trigger: GATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | GCTGCGGCATCTCAGCCAAAACTGCATGGAGGTCCATaGCCTTGGTCTTTTCCTCTACCACATTCTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AAASQPKLHGGP*PWSFPLPHSQA Trigger: TGCCTGAGAATGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCCATGCAGTTTTGGCTGAGATGCCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGCTTCTTTCCAGGTTGCACTGCATCTGGACCACCTTCCTGGTCTCCGAGTCGAGCCTGGATCACACTaGATGTACAGAACTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LASFQVALHLDHLPGLRVEPGSH*MYRTLS Trigger: AGAGAGAGTTCTGTACATCAAGTGTGATCCAGGCTC...GACTCGGAGACCAGGAAGGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAAACTCTGGTATCCCCGTaGGCTTGGATCTCGAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KETSWAGEKEGARNPHPQTLVSP*AWISST Trigger: TGTACTCGAGATCCAAGCCAACGGGGATACCAGAGT...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CCA 72 bp | AACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTaGCAAGCCAGTCAGCTAGCCCAGGACAAAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: NLLTKGPNSSQQ*QASQLAQDKDS Trigger: TGAATCTTTGTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGAGAAGATGTCCACAGCAGTCCCATCATTGACTTCGCCATACTCTGGTGGTCATCAGGAAGTGCATaGGAGAAGATGCGGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: EGEDVHSSPIIDFAILWWSSGSA*EKMRYH Trigger: GTGGTACCGCATCTTCTCCAATGCACTTCCTGATGA...CCACCAGAGTATGGCGAAGTCAATGATGGGACTGCTGTGGACATCTTCTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR TCA 72 bp | GAGGCAGTTCAAGAACCAAGGAAACCAGGGTGGCTCTaGGGGGAAGCGTTCATCAGGACTTTGAAACCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: EAVQEPRKPGWL*GEAFIRTLKPV Trigger: TACTGGTTTCAAAGTCCTGATGAACGCTTCCCCTCAGAGCCACCCTGGTTTCCTTGGTTCTTGAACTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 72 bp | CACAGCAGTCCCATCATTGACTTCGCCATACTCTGGTaGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HSSPIIDFAILW*EKVQVSEFFPF Trigger: GAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAATGATGGGACTGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR GCA 72 bp | CCATCATTGACTTCGCCATACTCTGGTGGGAAAAAGTaGAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAATA | + |
|
Preference number: 3 (lower is better) Translates to: PSLTSPYSGGKK*RFRSSSRSARI Trigger: TATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAATGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGAACTATTCCTAATACAATAGTGAGCTTTCCTGGTTTCATACACAAAGTGTCCTTCCCAAGGGCTTaGGGGAGGACACAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGTIPNTIVSFPGFIHKVSFPRA*GRTQVL Trigger: CAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGGA...CACTTTGTGTATGAAACCAGGAAAGCTCACTATTGTATTAGGAATAGTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 72 bp | AAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTaGATCACACTTGATGTACAGAACTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KELSLGINLVRA*ITLDVQNSLSL Trigger: GAGAGAGAGAGAGTTCTGTACATCAAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CCA 72 bp | AATCTGTTTTATTTTAGGTCTTGGTTTCGGTTAAGATaGCATGGTAGGTACCACAGTAACAACACCCACCGC | + |
|
Preference number: 3 (lower is better) Translates to: NLFYFRSWFRLR*HGRYHSNNTHR Trigger: GCGGTGGGTGTTGTTACTGTGGTACCTACCATGCCATCTTAACCGAAACCAAGACCTAAAATAAAACAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | GAGTGCACCTCAAAGAGCACTCGGTGGAAGAGGAGGTaGTGGGCTGAGGGTCGGCGGGCAGGGTCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ECTSKSTRWKRR*WAEGRRAGSRA Trigger: GGCCCGGGACCCTGCCCGCCGACCCTCAGCCCACAACCTCCTCTTCCACCGAGTGCTCTTTGAGGTGCACTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CAA 72 bp | CTGGATCCCGGGCATGTTCCCTTGGTTCACCAGGGCTaGGGGCCAAAGGGATCCGAGGGCCTCCAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDPGHVPLVHQG*GPKGSEGLQRP Trigger: TGGCCTCTGGAGGCCCTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCTGCAAGGGATCAGGACTGGTCTGAGCAGGACCAAGGAATTCCCTGGCTGCTCCCGCCGCTTCTaGCAGCGGCCACACGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLQGIRTGLSRTKEFPGCSRRF*QRPHGL Trigger: GAGCCCGTGTGGCCGCTGGCAGAAGCGGCGGGAGCA...GCCAGGGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCCCTTGCAGACCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | CGTACACCAGCGCTTCCAGGCCTGGCAGCGGACGCACGACTCCGTCGGGTGGGCGTCTTTTTGAGGAACTaGTTGAGGCTGCCAGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTPALPGLAADARLRRVGVFLRN*LRLPDD Trigger: GTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAAGAC...GCCCACCCGACGGAGTCGTGCGTCCGCTGCCAGGCCTGGAAGCGCTGGTGTACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCTCCCGCCGCTTCTaGCAGCGGCCACACGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSSREHRQKAALSSVGALCSRRF*QRPHGL Trigger: GAGCCCGTGTGGCCGCTGGCAGAAGCGGCGGGAGCA...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | GGCCAGAAAGGTGCTCTGGATCCCGGGCATGTTCCCTaGGTTCACCAGGGCTTGGGGCCAAAGGGATCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQKGALDPGHVP*VHQGLGPKGSE Trigger: CTCGGATCCCTTTGGCCCCAAGCCCTGGTGAACCAAGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| 3UTR CAA 72 bp | CGGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTaGACGATGTTGGGATGGTCCACCAGCGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RASEASSQYLCS*TMLGWSTSASC Trigger: GCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCTGCATTGGGGGTCCATaGGGCTGCGGCATCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAALSSVGALCQVDNPEPCIGGP*GCGISA Trigger: GGCTGAGATGCCGCAGCCCCATGGACCCCCAATGCA...GGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCGTTGGGGTCACTCAGTaGGTGCCTGGCTCGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAALSSVGALCQVDNPEPVGVTQ*VPGSSD Trigger: ATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAAC...GGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGGGGTCACTCAGTGAGTaGCTGGCTCGAGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVQPTHKRPQLFPAVASQGSLSE*LARAMA Trigger: GGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCC...CTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | TTCGCCATACTCTGGTGGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTGCTCCCGCCGCTTCTaGCAGCGGCCACACGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FAILWWEKVQVSEFFPFSCSRRF*QRPHGL Trigger: GAGCCCGTGTGGCCGCTGGCAGAAGCGGCGGGAGCA...GCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATGGAAGAGGAGGTTGTaGGCTGAGGGTCGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQGLWGGHRSWSQECGRWKRRL*AEGRRA Trigger: TGCCCGCCGACCCTCAGCCCACAACCTCCTCTTCCA...TCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | GCTCCAAGAAGGAGACCTCTGAGTACCGCCACTGCATaGGGGGTCCATGGGGCTGCGGCATCTCAGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: APRRRPLSTATA*GVHGAAASQPK Trigger: TTTTGGCTGAGATGCCGCAGCCCCATGGACCCCCAATGCAGTGGCGGTACTCAGAGGTCTCCTTCTTGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| 3UTR CAA 72 bp | AGGTGCCACCGAGCCTTGTCCTCGCTTCTTTCCAGGTaGCACTGCATCTGGACCACCTTCCTGGTCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCHRALSSLLSR*HCIWTTFLVSE Trigger: CTCGGAGACCAGGAAGGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTGTTGGGGTCACTCAGTaGGTGCCTGGCTCGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSSREHRQKAALSSVGAVGVTQ*VPGSSD Trigger: ATCGCTCGAGCCAGGCACTCACTGAGTGACCCCAAC...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTGAGTACCGCCACTGCATTGGGGGTCCATGGGGCTGCGGCATCTCAGCCATTCCTATCCCCGAAGTaGAGTTCGTTCCACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSTATALGVHGAAASQPFLSPK*SSFHTT Trigger: AGTGGTGTGGAACGAACTTCACTTCGGGGATAGGAA...TGGCTGAGATGCCGCAGCCCCATGGACCCCCAATGCAGTGGCGGTACTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCGCCAGAAAGGTGCTCTaGATCCCGGGCATGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSNLLTKGPNSSQQWQAARKVL*IPGMFP Trigger: AGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGC...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAAGGGTCACTCAGTGAGTaGCTGGCTCGAGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KETSWAGEKEGARNPHPQGSLSE*LARAMA Trigger: GGCCATCGCTCGAGCCAGGCACTCACTGAGTGACCC...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTAGCAGCTTCAGCGAGTaGACCTCAAAGAGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVWGLFAKWTTLSPCISASSFSE*TSKSTR Trigger: CCGAGTGCTCTTTGAGGTGCACTCGCTGAAGCTGCT...AGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGTGGAAGAGGAGGTTGTaGGCTGAGGGTCGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEPTSSTQTHNFPREGMWWKRRL*AEGRRA Trigger: TGCCCGCCGACCCTCAGCCCACAACCTCCTCTTCCA...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAATGCATTGGGGGTCCATaGGGCTGCGGCATCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KETSWAGEKEGARNPHPQCIGGP*GCGISA Trigger: GGCTGAGATGCCGCAGCCCCATGGACCCCCAATGCA...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | ATCTCTGCTGGGCCGTCAGGACTGGGAAGGTCACGCTaGCGTCCCTCGGTACTTGAGAAAAGTGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISAGPSGLGRSR*RPSVLEKSGLQ Trigger: CTGGAGACCACTTTTCTCAAGTACCGAGGGACGCAAGCGTGACCTTCCCAGTCCTGACGGCCCAGCAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCTGGATGAAGCAGTaGGCTGCCAGCAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSREHRQKAALSSVGALCWMKQ*AASSFS Trigger: GCTGAAGCTGCTGGCAGCTCACTGCTTCATCCAGCA...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR TCA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACGCGTCCCTCGGTACTTaGGAAAAGTGGTCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDASLGT*EKWSPE Trigger: TTCTGGAGACCACTTTTCTCAAGTACCGAGGGACGC...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTAGCAGCTTCAGCGAGTaGACCTCAAAGAGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFSSREHRQKAALSSVGASSFSE*TSKSTR Trigger: CCGAGTGCTCTTTGAGGTGCACTCGCTGAAGCTGCT...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCTGCAAGGGATCAGGACTGGTCTGAGCAGGACCAAGGAATTCCCTGGCCTTTCCAGGTTGCACTaGATCTGGACCACCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLQGIRTGLSRTKEFPGLSRLH*IWTTFL Trigger: CAGGAAGGTGGTCCAGATGCAGTGCAACCTGGAAAG...GCCAGGGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCCCTTGCAGACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAGAGCAGAGTAAGGTaGCACCGAGCCTTGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKGFGEDTGPGLKSVEDQKSRVR*HRALSS Trigger: CGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTT...CTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCTCAGCCAAAACTGCATaGAGGTCCATGGCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGSNLLTKGPNSSQQWQASAKTA*RSMALV Trigger: GACCAAGGCCATGGACCTCCATGCAGTTTTGGCTGA...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGGCGTTGGAGTTTTaGCCTTTTGGGCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAALSSVGALCQVDNPEPLALEF*PFGLPL Trigger: CAGAGGAAGCCCAAAAGGCCAAAACTCCAACGCCAG...GGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCTCTGGACCACCTTCCTaGTCTCCGAGTCAAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAALSSVGALCQVDNPEPSGPPS*SPSQRV Trigger: AACCCTTTGACTCGGAGACCAGGAAGGTGGTCCAGA...GGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTTCTGGACCACCTTCCTaGTCTCCGAGTCAAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVWGLFAKWTTLSPCISASGPPS*SPSQRV Trigger: AACCCTTTGACTCGGAGACCAGGAAGGTGGTCCAGA...AGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTTGGATCTCGAGTACAGCCATGCCAGAAAGGTGCTCTaGATCCCGGGCATGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFCDSGIPVGLDLEYSHARKVL*IPGMFP Trigger: AGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGC...ATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTGCCAGAAAGGTGCTCTaGATCCCGGGCATGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSREHRQKAALSSVGALARKVL*IPGMFP Trigger: AGGGAACATGCCCGGGATCCAGAGCACCTTTCTGGC...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | GAGGCGTCCAGCCAATACTTGTGCAGCTTGACGATGTaGGGATGGTCCACCAGCGCCAGCTGCTCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: EASSQYLCSLTM*GWSTSASCSNM Trigger: CATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228419.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGGGTACTGGTGCTGGATaGAGCAGTGAGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEPTSSTQTHNFPREGMWGTGAG*SSELPA Trigger: TGCTGGCAGCTCACTGCTTCATCCAGCACCAGTACC...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTGCGTCCCTCGGTACTTaGGAAAAGTGGTCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFSSREHRQKAALSSVGAASLGT*EKWSPE Trigger: TTCTGGAGACCACTTTTCTCAAGTACCGAGGGACGC...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGGGCCATTGTGCTGAATaGAGATGGTGTCGCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKGFGEDTGPGLKSVEDQGHCAE*RWCRSS Trigger: TGACGAGCGACACCATCTTCATTCAGCACAATGGCC...CTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTCTTAAGAGCAGAGTAAGGTaGCACCGAGCCTTGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSSREHRQKAALSSVGALKSRVR*HRALSS Trigger: CGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTT...AAGAGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACGTCTTTTTGAGGAACTaGTTGAGGCTGCCAGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDVFLRN*LRLPDD Trigger: GTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAAGAC...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGGAGCCTCCTCCGTGTCCATaGCCAGAAAGGTGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKVQVSEFFPFSSNRAPEPPPCP*PERCSG Trigger: TCCAGAGCACCTTTCTGGCCATGGACACGGAGGAGG...CTCCGGAGCCCTATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CCA 90 bp | GCACACATCCCGAAGGAGAAGATGTCCACAGCAGTCCCATCATTGACTTCGCCACCTCCTCCGTGTCCATaGCCAGAAAGGTGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKEKMSTAVPSLTSPPPPCP*PERCSG Trigger: TCCAGAGCACCTTTCTGGCCATGGACACGGAGGAGG...TGGCGAAGTCAATGATGGGACTGCTGTGGACATCTTCTCCTTCGGGATGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CAA 72 bp | TCAAGCACCAAGAGCAGAGTAAGGTGCCACCGAGCCTaGTCCTCGCTTCTTTCCAGGTTGCACTGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKSRVRCHRA*SSLLSRLHCIW Trigger: CCAGATGCAGTGCAACCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCTTACTCTGCTCTTGGTGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCGTTGGCTTGGATCTCGAGTACAGCCATCTCCAGTGCACACATCCCGAAGTTCCTATCCCCGAAGTaGAGTTCGTTCCACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPLAWISSTAISSAHIPKFLSPK*SSFHTT Trigger: AGTGGTGTGGAACGAACTTCACTTCGGGGATAGGAA...CTTCGGGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTTTCCTATCCCCGAAGTaGAGTTCGTTCCACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VFSSREHRQKAALSSVGAFLSPK*SSFHTT Trigger: AGTGGTGTGGAACGAACTTCACTTCGGGGATAGGAA...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | GTAACAACACCCACCGCCCACGGCTGTTCTCCAAGCACCAAAGCCCAGGATGACTCTGGTGGGAAAAAGTaGAGGTTTCGGAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTTPTAHGCSPSTKAQDDSGGKK*RFRSSS Trigger: GGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGA...GTCATCCTGGGCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGGGAGGTCCATGGCCTTaGTCTTTTCCTCTACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PKGFGEDTGPGLKSVEDQGGPWP*SFPLPH Trigger: ATGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCC...CTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAGTTCCAGGGAACACAGGCAGAAGGCAGCTTTGAGCAGTGTGGGGGCTTGCTCAAACATGGTCTaGATCTTCTCCTCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFSSREHRQKAALSSVGACSNMV*IFSSWA Trigger: GGCCCATGAGGAGAAGATCCAGACCATGTTTGAGCA...AGCCCCCACACTGCTCAAAGCTGCCTTCTGCCTGTGTTCCCTGGAACTGAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGAAGGCCCGGGCGTTCATaGCCTTGTGGTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNPHPQLKHTTSPGRECGRPGRS*PCGSSW Trigger: CCAAGAAGAACCACAAGGCCATGAACGCCCGGGCCT...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACCATCAGGAAGTGCATTaGAGAAGATGCGGTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TKGPNSSQQWQASQLAQDHQEVH*RRCGTT Trigger: TGTGGTACCGCATCTTCTCCAATGCACTTCCTGATG...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | GATGGCCTCTTCTGTGACTCTGGTATCCCCGTTGGCTaGGATCTCGAGTACAGCCATCTCCAGTGCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: DGLFCDSGIPVG*DLEYSHLQCTH Trigger: ATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCAGAGTCACAGAAGAGGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| 3UTR CAA 72 bp | CAGGACTGGGAAGGTCACGCTTGCGTCCCTCGGTACTaGAGAAAAGTGGTCTCCAGAAAGGCTGCTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDWEGHACVPRY*RKVVSRKAASF Trigger: AAAGCTAGCAGCCTTTCTGGAGACCACTTTTCTCAAGTACCGAGGGACGCAAGCGTGACCTTCCCAGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR GCA 90 bp | TGGTATCCCCGTTGGCTTGGATCTCGAGTACAGCCATCTCCAGTGCACACATCCGTCTTTTTGAGGAACTaGTTGAGGCTGCCAGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: WYPRWLGSRVQPSPVHTSVFLRN*LRLPDD Trigger: GTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAAGAC...GGATGTGTGCACTGGAGATGGCTGTACTCGAGATCCAAGCCAACGGGGATACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTGAGATCATCAGGAAGTaGATTGGAGAAGATGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AVWGLFAKWTTLSPCISAEIIRK*IGEDAV Trigger: TACCGCATCTTCTCCAATGCACTTCCTGATGATCTC...AGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | GGCATCTCAGCCAAAACTGCATGGAGGTCCATGGCCTaGGTCTTTTCCTCTACCACATTCTCAGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GISAKTAWRSMA*VFSSTTFSGMR Trigger: CCTCATGCCTGAGAATGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCCATGCAGTTTTGGCTGAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGGATAGATCCCGTTCCTaGCATCCTCTAGGAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKGFGEDTGPGLKSVEDQDRSRS*HPLGIC Trigger: ACAAATTCCTAGAGGATGTCAGGAACGGGATCTATC...CTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGCTGCATGGAGGTCCATaGCCTTGGTCTTTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QEPTSSTQTHNFPREGMWLHGGP*PWSFPL Trigger: TAGAGGAAAAGACCAAGGCCATGGACCTCCATGCAG...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGAAAGGGTTCTGGCGTTaGAGTTTTGGCCTTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QEPTSSTQTHNFPREGMWKGFWR*SFGLLG Trigger: GCCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTT...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAAGAGCGAGTCAAAGGGTTCTaGCGTTGGAGTTTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFGEDTGPGLKSVEDQKERVKGF*RWSFGL Trigger: AAGGCCAAAACTCCAACGCCAGAACCCTTTGACTCG...CTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAACGAGTCAAAGGGTTCTaGCGTTGGAGTTTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KETSWAGEKEGARNPHPQRVKGF*RWSFGL Trigger: AAGGCCAAAACTCCAACGCCAGAACCCTTTGACTCG...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GAGATCATCAGGAAGTGCATTGGAGAAGATGCGGTACCACACGGAGCCGATCTTATACCCGGGCGTTCATaGCCTTGTGGTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EIIRKCIGEDAVPHGADLIPGRS*PCGSSW Trigger: CCAAGAAGAACCACAAGGCCATGAACGCCCGGGTAT...AAGATCGGCTCCGTGTGGTACCGCATCTTCTCCAATGCACTTCCTGATGATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226444.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGCGCAAAGTTCATCAGTaGATAGATCCCGTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QEPTSSTQTHNFPREGMWRKVHQ*IDPVPD Trigger: GTCAGGAACGGGATCTATCCACTGATGAACTTTGCG...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | GGAGATCATCAGGAAGTGCATTGGAGAAGATGCGGTACCACACGGAGCCGATCTCCAGCTGCTCAAACATaGTCTGGATCTTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDHQEVHWRRCGTTRSRSPAAQT*SGSSPH Trigger: ATGAGGAGAAGATCCAGACCATGTTTGAGCAGCTGG...AGATCGGCTCCGTGTGGTACCGCATCTTCTCCAATGCACTTCCTGATGATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTGGATCACACTTCCTCCTCCGTGTCCATaGCCAGAAAGGTGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKELSLGINLVRAWITLPPPCP*PERCSG Trigger: TCCAGAGCACCTTTCTGGCCATGGACACGGAGGAGG...AAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTTTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | TTGACTTCGCCATACTCTGGTGGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTGCTCAAACATGGTCTaGATCTTCTCCTCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTSPYSGGKKCRFRSSSRCSNMV*IFSSWA Trigger: GGCCCATGAGGAGAAGATCCAGACCATGTTTGAGCA...ACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAAGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CCA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGATTCGCCATACTCTGGTaGGAAAAAGTGCAGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RNPHPQLKHTTSPGRECGFAILW*EKVQVS Trigger: CGAAACCTGCACTTTTTCCCACCAGAGTATGGCGAA...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| 3UTR CAA 72 bp | CCTTACCATTGCAGGGAAGTGAGTTCTGCCAATAGCTaGAAGGAGCAGGAGGTAAGTCCCAGCTTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PYHCREVSSANS*KEQEVSPSFQK Trigger: TTTCTGGAAGCTGGGACTTACCTCCTGCTCCTTCAAGCTATTGGCAGAACTCACTTCCCTGCAATGGTAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019516.5 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTGGATCACACTTAGTGCAGACAGGATCTaGGTACACCAGCGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKELSLGINLVRAWITLSADRI*VHQRFQ Trigger: CTGGAAGCGCTGGTGTACGCAGATCCTGTCTGCACT...AAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTTTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTGGATCACACTTCGCTTCTTTCCAGGTTaGACTGCATCTGGACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKELSLGINLVRAWITLRFFPG*TASGPP Trigger: AGGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCG...AAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTGGATCACACTTCGCAAAGTTCATCAGTaGATAGATCCCGTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKELSLGINLVRAWITLRKVHQ*IDPVPD Trigger: GTCAGGAACGGGATCTATCCACTGATGAACTTTGCG...AAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTTTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGTTTCATACACAAAGTGTTTAAAAAGGACCGTGACTGCATTACATTTTGCTGGATGAAGCAGTaGGCTGCCAGCAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGFIHKVFKKDRDCITFCWMKQ*AASSFS Trigger: GCTGAAGCTGCTGGCAGCTCACTGCTTCATCCAGCA...AAATGTAATGCAGTCACGGTCCTTTTTAAACACTTTGTGTATGAAACCAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | ACCACTGGGTTTATGATATCTGTTAACAGCAGCAATGTGGAACTATTCCTAATAGATGAAGCAGTGAGCTaGCAGCAGCTTCAGCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTGFMISVNSSNVELFLIDEAVS*QQLQRV Trigger: CACTCGCTGAAGCTGCTGGCAGCTCACTGCTTCATC...TATTAGGAATAGTTCCACATTGCTGCTGTTAACAGATATCATAAACCCAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR GCA 90 bp | TGTCCCATGACAAATCTGTTTTATTTTAGGTCTTGGTTTCGGTTAAGATGGCATCGCTTCTTTCCAGGTTaGACTGCATCTGGACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CPMTNLFYFRSWFRLRWHRFFPG*TASGPP Trigger: AGGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCG...ATGCCATCTTAACCGAAACCAAGACCTAAAATAAAACAGATTTGTCATGGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | ACCACTGGGTTTATGATATCTGTTAACAGCAGCAATGTGGAACTATTCCTAATATCAGCCAAAACTGCATaGAGGTCCATGGCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGFMISVNSSNVELFLISAKTA*RSMALV Trigger: GACCAAGGCCATGGACCTCCATGCAGTTTTGGCTGA...TATTAGGAATAGTTCCACATTGCTGCTGTTAACAGATATCATAAACCCAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | ACCACTGGGTTTATGATATCTGTTAACAGCAGCAATGTGGAACTATTCCTAATACTGGCGTTGGAGTTTTaGCCTTTTGGGCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTGFMISVNSSNVELFLILALEF*PFGLPL Trigger: CAGAGGAAGCCCAAAAGGCCAAAACTCCAACGCCAG...TATTAGGAATAGTTCCACATTGCTGCTGTTAACAGATATCATAAACCCAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | ACCACTGGGTTTATGATATCTGTTAACAGCAGCAATGTGGAACTATTCCTAATATGCTCAAACATGGTCTaGATCTTCTCCTCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTGFMISVNSSNVELFLICSNMV*IFSSWA Trigger: GGCCCATGAGGAGAAGATCCAGACCATGTTTGAGCA...TATTAGGAATAGTTCCACATTGCTGCTGTTAACAGATATCATAAACCCAGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGTTTCATACACAAAGTGTTTAAAAAGGACCGTGACTGCATTACATTTGGAGGTCCATGGCCTTaGTCTTTTCCTCTACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPGFIHKVFKKDRDCITFGGPWP*SFPLPH Trigger: ATGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCC...AAATGTAATGCAGTCACGGTCCTTTTTAAACACTTTGTGTATGAAACCAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGTTTCATACACAAAGTGTTTAAAAAGGACCGTGACTGCATTACATTTAAAGGGTTCTGGCGTTaGAGTTTTGGCCTTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGFIHKVFKKDRDCITFKGFWR*SFGLLG Trigger: GCCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTT...AAATGTAATGCAGTCACGGTCCTTTTTAAACACTTTGTGTATGAAACCAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGTTTCATACACAAAGTGTTTAAAAAGGACCGTGACTGCATTACATTTCCAGCTGCTCAAACATaGTCTGGATCTTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPGFIHKVFKKDRDCITFPAAQT*SGSSPH Trigger: ATGAGGAGAAGATCCAGACCATGTTTGAGCAGCTGG...AAATGTAATGCAGTCACGGTCCTTTTTAAACACTTTGTGTATGAAACCAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGCCTGGCAGCGGACGCACGACTCCGTCGGGTGGGCACCAAAAGGCTGCCCCGGGCATGTTCCCTaGGTTCACCTGCTCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FQAWQRTHDSVGWAPKGCPGHVP*VHLLPP Trigger: CGGCGGGAGCAGGTGAACCAAGGGAACATGCCCGGG...GCAGCCTTTTGGTGCCCACCCGACGGAGTCGTGCGTCCGCTGCCAGGCCTGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | CAGGATCTGCGTACACCAGCGCTTCCAGGCCTGGCAGCGGACGCACGACTCCGTTGCAGCTTGACGATGTaGGGATGGTCCACCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDLRTPALPGLAADARLRCSLTM*GWSTSA Trigger: GGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCA...ACGGAGTCGTGCGTCCGCTGCCAGGCCTGGAAGCGCTGGTGTACGCAGATCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS TCA 90 bp | CCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTTaGCGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCAAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRGPQRRPANTCAA*RCWDGPPAPAAQTW Trigger: CCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000228366.3 |
||
| CDS TCA 90 bp | TCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTTaGCGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCAAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRGPQRRPANTCAA*RCWDGPPAPAAQTW Trigger: CCATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS GCA 90 bp | AAGATGACCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTaGAGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KMTLARASEASSQYL*SLTMLGWSTSASCS Trigger: TGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGGTCATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000228366.3 |
||
| CDS GCA 90 bp | CACGTATTCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTaGAGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVFLARASEASSQYL*SLTMLGWSTSASCS Trigger: TGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGAATACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGGAGATCATCCCCGGGCATGTTCCCTaGGTTCACCTGCTCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VQVSEFFPFSSNRAPEIIPGHVP*VHLLPP Trigger: CGGCGGGAGCAGGTGAACCAAGGGAACATGCCCGGG...GATGATCTCCGGAGCCCTATTCGAGCTGAACGGGAAGAACTCCGAAACCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | GTGCAGACAGGATCTGCGTACACCAGCGCTTCCAGGCCTGGCAGCGGACGCACGTTTTTGAGGAACTGCTaGAGGCTGCCAGACGACACG | + |
|
Preference number: 5 (lower is better) Translates to: VQTGSAYTSASRPGSGRTFLRNC*RLPDDT Trigger: CGTGTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAA...CGTGCGTCCGCTGCCAGGCCTGGAAGCGCTGGTGTACGCAGATCCTGTCTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAAGAGCCCGGGCATGTTCCCTaGGTTCACCTGCTCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GFGEDTGPGLKSVEDQKEPGHVP*VHLLPP Trigger: CGGCGGGAGCAGGTGAACCAAGGGAACATGCCCGGG...CTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGACGGTGGAAGAGGAGGTaGTGGGCTGAGGGTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RNPHPQLKHTTSPGRECGRWKRR*WAEGRR Trigger: CCGCCGACCCTCAGCCCACAACCTCCTCTTCCACCG...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTCGCTTCTTTCCAGGTaGCACTGCATCTGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: AALSSVGALCQVDNPEPLSLLSR*HCIWTT Trigger: GGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCGA...CAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGAAGGTGCCACCGAGCCTaGTCCTCGCTTCTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSQGLWGGHRSWSQECGRRCHRA*SSLLSR Trigger: CCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCT...TCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCTGCAAGGGATCAGGACTGGTCTGAGCAGGACCAAGGAATTCCCTGGCCAAGGTGCCACCGAGCCTaGTCCTCGCTTCTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSARDQDWSEQDQGIPWPRCHRA*SSLLSR Trigger: CCTGGAAAGAAGCGAGGACAAGGCTCGGTGGCACCT...TGGCCAGGGAATTCCTTGGTCCTGCTCAGACCAGTCCTGATCCCTTGCAGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCACTCTGGTATCCCCGTaGGCTTGGATCTCGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: GGSNLLTKGPNSSQQWQATLVSP*AWISST Trigger: TGTACTCGAGATCCAAGCCAACGGGGATACCAGAGT...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GAAAGATCCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAGTTTTGGCCTTTaGGGCTTCCTCTGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERSFPRALGRTQVLVSRVWSFGL*GFLWGW Trigger: CCACCCCCAGAGGAAGCCCAAAAGGCCAAAACTCCA...CACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGGATCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTTCTGGCGTTGGAGTTTaGGCCTTTTGGGCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVWGLFAKWTTLSPCISASGVGV*AFWASS Trigger: AGAGGAAGCCCAAAAGGCCAAAACTCCAACGCCAGA...AGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCTCTGGCGTTGGAGTTTaGGCCTTTTGGGCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSNLLTKGPNSSQQWQASGVGV*AFWASS Trigger: AGAGGAAGCCCAAAAGGCCAAAACTCCAACGCCAGA...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCTTTGAGCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCAAAGGGTTCTGGCGTaGGAGTTTTGGCCTTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KAALSSVGALCQVDNPEPQRVLA*EFWPFG Trigger: CCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTTG...GGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGCTCAAAGCTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACCAAAGGGTTCTGGCGTaGGAGTTTTGGCCTTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TKGPNSSQQWQASQLAQDQRVLA*EFWPFG Trigger: CCCAAAAGGCCAAAACTCCAACGCCAGAACCCTTTG...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTGAAAGGCTGCTAGCTTaGTCCTGTCATCCTCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVWGLFAKWTTLSPCISAERLLA*SCHPRA Trigger: TGCACGAGGATGACAGGACAAAGCTAGCAGCCTTTC...AGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCAGTCAGCTAGCCCAGGACGAAAGGCTGCTAGCTTaGTCCTGTCATCCTCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TKGPNSSQQWQASQLAQDERLLA*SCHPRA Trigger: TGCACGAGGATGACAGGACAAAGCTAGCAGCCTTTC...GTCCTGGGCTAGCTGACTGGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GGAGATCATCAGGAAGTGCATTGGAGAAGATGCGGTACCACACGGAGCCGATCTTGCAGCTTGACGATGTaGGGATGGTCCACCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDHQEVHWRRCGTTRSRSCSLTM*GWSTSA Trigger: GGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCA...AGATCGGCTCCGTGTGGTACCGCATCTTCTCCAATGCACTTCCTGATGATCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | AGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGATGCAGCTTGACGATGTaGGGATGGTCCACCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNPHPQLKHTTSPGRECGCSLTM*GWSTSA Trigger: GGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCA...TCCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATTTTTGAGGAACTGCTaGAGGCTGCCAGACGACACG | + |
|
Preference number: 5 (lower is better) Translates to: PSQGLWGGHRSWSQECGRFLRNC*RLPDDT Trigger: CGTGTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAA...TCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTCCAACCTACTCACAAAAGGCCCCAACTCTTCCCAGCAGTGGCAAGCCACATCCTCTAGGAATTaGTCCAGCTCCAAGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGSNLLTKGPNSSQQWQATSSRN*SSSKKE Trigger: CTCCTTCTTGGAGCTGGACAAATTCCTAGAGGATGT...GGCTTGCCACTGCTGGGAAGAGTTGGGGCCTTTTGTGAGTAGGTTGGACCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCAAGGGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCATCAGGAAGTGCATaGGAGAAGATGCGGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSQGLWGGHRSWSQECGRSSGSA*EKMRYH Trigger: GTGGTACCGCATCTTCTCCAATGCACTTCCTGATGA...TCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCCCTTGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGGGGAGGACACAGGTCCTGGTCTCAAGAGTGTGGAAGATCAGAAAGAGACTCTGGTATCCCCGTaGGCTTGGATCTCGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: GFGEDTGPGLKSVEDQKETLVSP*AWISST Trigger: TGTACTCGAGATCCAAGCCAACGGGGATACCAGAGT...CTCTTTCTGATCTTCCACACTCTTGAGACCAGGACCTGTGTCCTCCCCAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | CAGGAACCCACATCCTCAACTCAAACACACAACTTCCCCAGGGAGGGAATGTGGTGGAGGTCCATGGCCTaGGTCTTTTCCTCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: QEPTSSTQTHNFPREGMWWRSMA*VFSSTT Trigger: TGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCCA...CCACATTCCCTCCCTGGGGAAGTTGTGTGTTTGAGTTGAGGATGTGGGTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | AAAGAGACAAGTTGGGCTGGGGAGAAAGAGGGAGCCAGGAACCCACATCCTCAATGGAGGTCCATGGCCTaGGTCTTTTCCTCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: KETSWAGEKEGARNPHPQWRSMA*VFSSTT Trigger: TGTGGTAGAGGAAAAGACCAAGGCCATGGACCTCCA...TTGAGGATGTGGGTTCCTGGCTCCCTCTTTCTCCCCAGCCCAACTTGTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | CGCCATACTCTGGTGGGAAAAAGTGCAGGTTTCGGAGTTCTTCCCGTTCAGCTCTTTTTGAGGAACTGCTaGAGGCTGCCAGACGACACG | + |
|
Preference number: 5 (lower is better) Translates to: RHTLVGKSAGFGVLPVQLFLRNC*RLPDDT Trigger: CGTGTCGTCTGGCAGCCTCAAGCAGTTCCTCAAAAA...GAGCTGAACGGGAAGAACTCCGAAACCTGCACTTTTTCCCACCAGAGTATGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTGGGGGCTCTTTGCCAAGTGGACAACCCTGAGCCCCTGTATCTCTGCTTTCTTCTTGGTCTTTTaGAGGAACTGCTTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVWGLFAKWTTLSPCISAFFLVF*RNCLRL Trigger: CAGCCTCAAGCAGTTCCTCAAAAAGACCAAGAAGAA...AGCAGAGATACAGGGGCTCAGGGTTGTCCACTTGGCAAAGAGCCCCCACACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | GAGTTCTTCCCGTTCAGCTCGAATAGGGCTCCGGAGATCATCAGGAAGTGCATTTTCTTCTTGGTCTTTTaGAGGAACTGCTTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EFFPFSSNRAPEIIRKCIFFLVF*RNCLRL Trigger: CAGCCTCAAGCAGTTCCTCAAAAAGACCAAGAAGAA...AATGCACTTCCTGATGATCTCCGGAGCCCTATTCGAGCTGAACGGGAAGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | AGATCATCAGGAAGTGCATTGGAGAAGATGCGGTACCACACGGAGCCGATCTTGTTCTTCTTGGTCTTTTaGAGGAACTGCTTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSSGSALEKMRYHTEPILFFLVF*RNCLRL Trigger: CAGCCTCAAGCAGTTCCTCAAAAAGACCAAGAAGAA...CAAGATCGGCTCCGTGTGGTACCGCATCTTCTCCAATGCACTTCCTGATGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAGGAACTTAGCCTGGGTATTAATCTAGTGAGAGCCTGGATCACACTTATGAATTCCCGCATGTaGGGGTCACTCAGTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKELSLGINLVRAWITLMNSRM*GSLSEC Trigger: GCACTCACTGAGTGACCCCAACATGCGGGAATTCAT...AAGTGTGATCCAGGCTCTCACTAGATTAATACCCAGGCTAAGTTCCTTTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | TGTGGAACTATTCCTAATACAATAGTGAGCTTTCCTGGTTTCATACACAAAGTGATGAATTCCCGCATGTaGGGGTCACTCAGTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CGTIPNTIVSFPGFIHKVMNSRM*GSLSEC Trigger: GCACTCACTGAGTGACCCCAACATGCGGGAATTCAT...CACTTTGTGTATGAAACCAGGAAAGCTCACTATTGTATTAGGAATAGTTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGTTTCATACACAAAGTGTTTAAAAAGGACCGTGACTGCATTACATTTTCGCTTCTTTCCAGGTaGCACTGCATCTGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: FPGFIHKVFKKDRDCITFSLLSR*HCIWTT Trigger: GGTGGTCCAGATGCAGTGCAACCTGGAAAGAAGCGA...AAATGTAATGCAGTCACGGTCCTTTTTAAACACTTTGTGTATGAAACCAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS-3UTR CAA 90 bp | ACCACTGGGTTTATGATATCTGTTAACAGCAGCAATGTGGAACTATTCCTAATAACATCCTCTAGGAATTaGTCCAGCTCCAAGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGFMISVNSSNVELFLITSSRN*SSSKKE Trigger: CTCCTTCTTGGAGCTGGACAAATTCCTAGAGGATGT...TATTAGGAATAGTTCCACATTGCTGCTGTTAACAGATATCATAAACCCAGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019516.5 ENSMUST00000228366.3 |
||
| CDS GCA 72 bp | GGCATGTTCCCTTGGTTCACCTGCTCCCGCCGCTTCTaGCAGCGGCCACACGGGCTCTCCTCCAGGATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GMFPWFTCSRRF*QRPHGLSSRMS Trigger: CGACATCCTGGAGGAGAGCCCGTGTGGCCGCTGGCAGAAGCGGCGGGAGCAGGTGAACCAAGGGAACATGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS GCA 72 bp | CTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTaGAGCTTGACGATGTTGGGATGGTCCACCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LARASEASSQYL*SLTMLGWSTSA Trigger: GGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226444.2 ENSMUST00000227605.2 ENSMUST00000228366.3 |
||
| CDS CAA 90 bp | CGACACGTATTCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTaGTGCAGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RHVFLARASEASSQY*CSLTMLGWSTSASC Trigger: GCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGAATACGTGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS CAA 72 bp | ACCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTaGTGCAGCTTGACGATGTTGGGATGGTCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLARASEASSQY*CSLTMLGWSTS Trigger: GCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000228366.3 |
||
| CDS CAA 90 bp | ACCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTaGACGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCAAACATG | + |
|
Preference number: 6 (lower is better) Translates to: TLARASEASSQYLCS*TMLGWSTSASCSNM Trigger: CATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000228366.3 |
||
| CDS CAA 90 bp | ATGAAGATGACCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTaGTGCAGCTTGACGATGTTGGGATGGTCCACCAGCGCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MKMTLARASEASSQY*CSLTMLGWSTSASC Trigger: GCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGGTCATCTTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226444.2 ENSMUST00000228366.3 |
||
| CDS CAA 72 bp | TTCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTaGTGCAGCTTGACGATGTTGGGATGGTCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLARASEASSQY*CSLTMLGWSTS Trigger: GCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS CAA 90 bp | TTCCTCGCGCGGGCCTCAGAGGCGTCCAGCCAATACTTGTGCAGCTaGACGATGTTGGGATGGTCCACCAGCGCCAGCTGCTCAAACATG | + |
|
Preference number: 6 (lower is better) Translates to: FLARASEASSQYLCS*TMLGWSTSASCSNM Trigger: CATGTTTGAGCAGCTGGCGCTGGTGGACCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGGCCCGCGCGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227605.2 |
||
| CDS CCA 72 bp | CACCAGCGCTTCCAGGCCCGGGCGTTCATGGCCTTGTaGTTCTTCTTGGTCTTTTTGAGGAACTGCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HQRFQARAFMAL*FFLVFLRNCLR Trigger: CCTCAAGCAGTTCCTCAAAAAGACCAAGAAGAACCACAAGGCCATGAACGCCCGGGCCTGGAAGCGCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||
| CDS CCA 72 bp | CAGCCCACTCCCCATACCCGGGCGTTCATGGCCTTGTaGTTCTTCTTGGTCTTTTTGAGGAACTGCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPTPHTRAFMAL*FFLVFLRNCLR Trigger: CCTCAAGCAGTTCCTCAAAAAGACCAAGAAGAACCACAAGGCCATGAACGCCCGGGTATGGGGAGTGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226444.2 |
||
| CDS CAA 72 bp | GTACACCAGCGCTTCCAGGCCCGGGCGTTCATGGCCTaGTGGTTCTTCTTGGTCTTTTTGAGGAACTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VHQRFQARAFMA*WFFLVFLRNCL Trigger: CAAGCAGTTCCTCAAAAAGACCAAGAAGAACCACAAGGCCATGAACGCCCGGGCCTGGAAGCGCTGGTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228366.3 |
||