Pregenerated sensors for NRBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029148Ensembl transcript IDs: ENSMUST00000031034.12, ENSMUST00000202505.2, ENSMUST00000202576.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTaGAGCATGCCCAGGGACAGCCACAGCCTGGCTAGGGGCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: WARRVILTGEKGQED*SMPRDSHSLARGLA Trigger: AGCCAGGCCCCTAGCCAGGCTGTGGCTGTCCCTGGGCATGCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGGGGACAGCCACAGCCTaGCTAGGGGCCTGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPGTATA*LGAWLK Trigger: CTTGAGCCAGGCCCCTAGCCAGGCTGTGGCTGTCCC...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCGGGACAGCCACAGCCTaGCTAGGGGCCTGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SLLPMRPSGIVELSFPSAGTATA*LGAWLK Trigger: CTTGAGCCAGGCCCCTAGCCAGGCTGTGGCTGTCCC...GGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| 3UTR-3UTR GCA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAAGGAGGACTGCAGCATaGCCAGGGACAGCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLRRTAA*PGTATA Trigger: GGCTGTGGCTGTCCCTGGGCATGCTGCAGTCCTCCT...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| 3UTR-3UTR GCA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAAAGGGACAGGAGGACTaGAGCATGCCCAGGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLKGQED*SMPRDS Trigger: GCTGTCCCTGGGCATGCTGCAGTCCTCCTGTCCCTT...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| 3UTR-3UTR GCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCAAGGGACAGGAGGACTaGAGCATGCCCAGGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: RGPPVHTSRAGGSRSATSKGQED*SMPRDS Trigger: GCTGTCCCTGGGCATGCTGCAGTCCTCCTGTCCCTT...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCAAGGGTAATACTGACTaGGGAGAAGGGACAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RGPPVHTSRAGGSRSATSKGNTD*GEGTGG Trigger: TCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTT...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCCTCGGGAGAAGCAGCTaGAGTTGTAGAGGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGLGRSS*SCRGHR Trigger: CCTGTGACCTCTACAACTTCAGCTGCTTCTCCCGAG...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCTCAGGTTCCCATGGATaGTGGGAGGGTCACAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGSGSHG*WEGHRS Trigger: ACTCCTGTGACCCTCCCATCATCCATGGGAACCTGA...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGGACTCGCCATTGCCCTaGATCTCCAGCACTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPDSPLP*ISSTAI Trigger: GATGGCAGTGCTGGAGATTCAGGGCAATGGCGAGTC...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGGCTGGATGGCACTGCTaGTGGCTTCCTGTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPAGWHC*WLPVAH Trigger: ATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGC...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCCAGCGCCCACAGGGTaGCTCTTCCAAGATCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLLPMRPSGIVELSFPSAPAPTG*LFQDLR Trigger: TCTGAGATCTTGGAAGAGTCACCCTGTGGGCGCTGG...GGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGCTAATGAAGCCCAGCTaGACCAGCTCAGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPLMKPS*TSSAAK Trigger: CTTGGCAGCTGAGCTGGTGCAGCTGGGCTTCATTAG...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAAGTTCTCTGGCTGTTaGTCTCCGAGCAGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGKFSGC*SPSRLR Trigger: TCTGAGCCTGCTCGGAGACCAACAGCCAGAGAACTT...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGAACTGGTTCTCGTCCTaGCCCTGCGGGAATTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPNWFSS*PCGNFS Trigger: GCTGAAATTCCCGCAGGGCCAGGACGAGAACCAGTT...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCGTACAAAGTCTGAACTaGTTCTCGTCCTGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGVQSLN*FSSWPC Trigger: GCAGGGCCAGGACGAGAACCAGTTCAGACTTTGTAC...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCTTCCTGTGGCACATATaGGGACTCGCCATTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RGPPVHTSRAGGSRSATSFLWHI*GLAIAL Trigger: CAGGGCAATGGCGAGTCCTCATATGTGCCACAGGAA...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGTTCCTGTGGCACATATaGGGACTCGCCATTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQFLWHI*GLAIAL Trigger: CAGGGCAATGGCGAGTCCTCATATGTGCCACAGGAA...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCCACTGCCATCTCCAGTaGACACATGCCAAAGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGHCHLQ*THAKGV Trigger: TACTCCTTTGGCATGTGTGCACTGGAGATGGCAGTG...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGCAGGTCAGGTTCCCATaGATGATGGGAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQQVRFP*MMGGSQ Trigger: CTGTGACCCTCCCATCATCCATGGGAACCTGACCTG...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTACAGGTCAGGTTCCCATaGATGATGGGAGGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLQVRFP*MMGGSQ Trigger: CTGTGACCCTCCCATCATCCATGGGAACCTGACCTG...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCCGGCAAGTCTTCACGTaGTTGTTGATAGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGRQVFT*LLIVSG Trigger: TCCTGACACTATCAACAATCACGTGAAGACTTGCCG...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGATGAGGACTCGCCATTaGCCTGAATCTCCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQMRTRH*PESPAL Trigger: CAGTGCTGGAGATTCAGGGCAATGGCGAGTCCTCAT...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCATGAGGACTCGCCATTaGCCTGAATCTCCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SLLPMRPSGIVELSFPSAMRTRH*PESPAL Trigger: CAGTGCTGGAGATTCAGGGCAATGGCGAGTCCTCAT...GGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGGGGCACTTCAAACAGTaGTGGGTGGAACAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPGHFKQ*WVEQKF Trigger: GAACTTCTGTTCCACCCAGCACTGTTTGAAGTGCCC...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCGATTCGATGTTGCACTaGATCAGCACCACCTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGDSMLH*ISTTFR Trigger: ACGAAAGGTGGTGCTGATGCAGTGCAACATCGAATC...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCGGAACAGAAGTTCTCTaGCTGTTGGTCTCCGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLPMRPSGIVELSFPSAGTEVL*LLVSEQ Trigger: CTGCTCGGAGACCAACAGCCAGAGAACTTCTGTTCC...GGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCGGAACAGAAGTTCTCTaGCTGTTGGTCTCCGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGPPVHTSRAGGSRSATSGTEVL*LLVSEQ Trigger: CTGCTCGGAGACCAACAGCCAGAGAACTTCTGTTCC...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGTGTCTCCACTTCAGCTaGCTCAGGAGTTGGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPCLHFS*LRSWSL Trigger: AAGACTCCAACTCCTGAGCCAGCTGAAGTGGAGACA...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTATTCTACCTTTGGGTCTaGGCCACTGCTGACTACTGT | + |
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Preference number: 4 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLFYLWV*ATADYC Trigger: ACAGTAGTCAGCAGTGGCTCAGACCCAAAGGTAGAA...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGAGCAAGAAGCTTGAGTaGGGGCACTTCAAACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQSKKLE*GHFKQC Trigger: GCACTGTTTGAAGTGCCCTCACTCAAGCTTCTTGCT...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCGAGCAGCAAGAAGCTTaGGTGAGGGCACTTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SLLPMRPSGIVELSFPSAEQQEA*VRALQT Trigger: TGTTTGAAGTGCCCTCACTCAAGCTTCTTGCTGCTC...GGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCTATCCATGTTCTTGGTaGTCTCCTCTAGAGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGYPCSW*SPLERS Trigger: AGAACGCTCTAGAGGAGATCACCAAGAACATGGATA...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCTCCTGCTGTGGCTGCTaGGGCCGAGGTAGCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCSCCGC*GRGSPK Trigger: CTTTGGGCTACCTCGGCCTCAGCAGCCACAGCAGGA...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGTCAAACAGTGCTGGGTaGAACAGAAGTTCTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPSNSAG*NRSSLA Trigger: AGCCAGAGAACTTCTGTTCCACCCAGCACTGTTTGA...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGCGGCAAGTCTTCACGTaGTTGTTGATAGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQRQVFT*LLIVSG Trigger: TCCTGACACTATCAACAATCACGTGAAGACTTGCCG...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTACTGTTGTCACGTTTGTaGCTTCTCCATACTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLLLSRL*LLHTLV Trigger: CACCAGAGTATGGAGAAGTCACAAACGTGACAACAG...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCGCAGTTTGTAGTTCTTaGGTTCAGAGAACTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: LSFPSARGPPVHTSRAGGAVCSS*VQRTVP Trigger: AGGTACAGTTCTCTGAACGCAAGAACTACAAACTGC...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGCAGATTATCAAACACTaGACGGACCTTTTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPQIIKH*TDLFLL Trigger: CAGGAGGAAAAGGTCCGTGCAGTGTTTGATAATCTG...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGTCTCCAGTGCACACATaGCAAAGGAGTAGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQSPVHT*QRSRCP Trigger: TGGACATCTACTCCTTTGGCATGTGTGCACTGGAGA...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR GCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCTCTCCAGTGCACACATaGCAAAGGAGTAGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGPPVHTSRAGGSRSATSSPVHT*QRSRCP Trigger: TGGACATCTACTCCTTTGGCATGTGTGCACTGGAGA...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCAGCAGAAGTGTTAGATaGTGTTTGACTCCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGPPVHTSRAGGSRSATSSRSVR*CLTPSS Trigger: GGAGGAGGGAGTCAAACACCATCTAACACTTCTGCT...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCGCTGGATGGCACTGCTaGTGGCTTCCTGTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCAGWHC*WLPVAH Trigger: ATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGC...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGGACTGCAGGCACTTTTaGATAAACTCCCTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPDCRHF*INSLCN Trigger: ATTACAGAGGGAGTTTATTCAAAAGTGCCTGCAGTC...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCGAAGTCAGGCGGCTCTaGTCAGCCTCACTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IWARRVILTGEKGQEDCSEVRRL*SASLMK Trigger: CTTCATTAGTGAGGCTGATCAGAGCCGCCTGACTTC...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCAGGTCACAGCTCAGGTaGCGGTTCAATTTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWARRVILTGEKGQEDCSRSQLR*RFNLSS Trigger: GGAGGACAAATTGAACCGGCACCTGAGCTGTGACCT...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGTGCACTGTCAATGCCTaGTACATTACGCTGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQCTVNA*YITLIH Trigger: GTGAATCAGCGTAATGTACCAGGCATTGACAGTGCA...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCCCCCAGCACTTCAAACAGTGCTaGGTGGAACAGAAGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPVHTSRAGGSRSATSPQHFKQC*VEQKFS Trigger: AGAGAACTTCTGTTCCACCCAGCACTGTTTGAAGTG...CTGGGGGCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCTCGGGAGAAGCAGCTaGAGTTGTAGAGGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVLGRSS*SCRGHR Trigger: CCTGTGACCTCTACAACTTCAGCTGCTTCTCCCGAG...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCGACTGCAGGCACTTTTaGATAAACTCCCTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPPVHTSRAGGSRSATSDCRHF*INSLCN Trigger: ATTACAGAGGGAGTTTATTCAAAAGTGCCTGCAGTC...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCGCAGTTTGTAGTTCTTaGGTTCAGAGAACTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPPVHTSRAGGSRSATSAVCSS*VQRTVP Trigger: AGGTACAGTTCTCTGAACGCAAGAACTACAAACTGC...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCCTGAATCTCCAGCACTaGCATCTCCAGTGCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: IWARRVILTGEKGQEDCSLNLQH*HLQCTH Trigger: ATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAG...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGCTAATGAAGCCCAGCTaGACCAGCTCAGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVLMKPS*TSSAAK Trigger: CTTGGCAGCTGAGCTGGTGCAGCTGGGCTTCATTAG...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAACTGGTTCTCGTCCTaGCCCTGCGGGAATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCNWFSS*PCGNFS Trigger: GCTGAAATTCCCGCAGGGCCAGGACGAGAACCAGTT...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCTGTCTCCACTTCAGCTaGCTCAGGAGTTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWARRVILTGEKGQEDCSCLHFS*LRSWSL Trigger: AAGACTCCAACTCCTGAGCCAGCTGAAGTGGAGACA...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTGACTCGCCATTGCCCTaGATCTCCAGCACTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTDSPLP*ISSTAI Trigger: GATGGCAGTGCTGGAGATTCAGGGCAATGGCGAGTC...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCGAAGTCAGGCGGCTCTaGTCAGCCTCACTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCEVRRL*SASLMK Trigger: CTTCATTAGTGAGGCTGATCAGAGCCGCCTGACTTC...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCGGAGTAGATGTCCACTaGTGTTGTCACGTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWARRVILTGEKGQEDCSGVDVH*CCHVCD Trigger: GTCACAAACGTGACAACAGCAGTGGACATCTACTCC...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAAGTTCTCTGGCTGTTaGTCTCCGAGCAGGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCKFSGC*SPSRLR Trigger: TCTGAGCCTGCTCGGAGACCAACAGCCAGAGAACTT...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCCGGGATGCTCTCATTTaGCATCAGGTCACAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCRDALI*HQVTAQ Trigger: CTGAGCTGTGACCTGATGCCAAATGAGAGCATCCCG...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTTCTACCTTTGGGTCTaGGCCACTGCTGACTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVFYLWV*ATADYC Trigger: ACAGTAGTCAGCAGTGGCTCAGACCCAAAGGTAGAA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTTCAGGTTCCCATGGATaGTGGGAGGGTCACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTSGSHG*WEGHRS Trigger: ACTCCTGTGACCCTCCCATCATCCATGGGAACCTGA...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCCACTGCCATCTCCAGTaGACACATGCCAAAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCHCHLQ*THAKGV Trigger: TACTCCTTTGGCATGTGTGCACTGGAGATGGCAGTG...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCTGCACTGTCAATGCCTaGTACATTACGCTGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IWARRVILTGEKGQEDCSCTVNA*YITLIH Trigger: GTGAATCAGCGTAATGTACCAGGCATTGACAGTGCA...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCGAGTCTTCTAGTAGCTaGATGGCACTGCTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCESSSS*MALLMA Trigger: AGCCATCAGCAGTGCCATCCAGCTACTAGAAGACTC...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGGTACAAAGTCTGAACTaGTTCTCGTCCTGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLVQSLN*FSSWPC Trigger: GCAGGGCCAGGACGAGAACCAGTTCAGACTTTGTAC...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCCTGTTGTCACGTTTGTaGCTTCTCCATACTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCLLSRL*LLHTLV Trigger: CACCAGAGTATGGAGAAGTCACAAACGTGACAACAG...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGGAGCAGCAAGAAGCTTaGGTGAGGGCACTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLEQQEA*VRALQT Trigger: TGTTTGAAGTGCCCTCACTCAAGCTTCTTGCTGCTC...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGGGTATGCACTGTCAATaGCTGGTACATTACGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NMGAKGNTDWGEGTGGLQGMHCQ*LVHYAD Trigger: ATCAGCGTAATGTACCAGGCATTGACAGTGCATACC...CTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGGTCTTCTTCAGAAACTaGTTAAGACTCCCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NMGAKGNTDWGEGTGGLQVFFRN*LRLPED Trigger: GTCCTCTGGGAGTCTTAAGCAGTTTCTGAAGAAGAC...CTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCTGAATCTCCAGCACTaGCATCTCCAGTGCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLLNLQH*HLQCTH Trigger: ATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAG...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGGGGCACTTCAAACAGTaGTGGGTGGAACAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLGHFKQ*WVEQKF Trigger: GAACTTCTGTTCCACCCAGCACTGTTTGAAGTGCCC...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCCACAGATTCGATGTTaGACTGCATCAGCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLPQIRC*TASAPP Trigger: AGGTGGTGCTGATGCAGTGCAACATCGAATCTGTGG...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTAGGTCACAGCTCAGGTaGCGGTTCAATTTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTRSQLR*RFNLSS Trigger: GGAGGACAAATTGAACCGGCACCTGAGCTGTGACCT...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCTCAAACAGTGCTGGGTaGAACAGAAGTTCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCSNSAG*NRSSLA Trigger: AGCCAGAGAACTTCTGTTCCACCCAGCACTGTTTGA...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTAGCAAGAAGCTTGAGTaGGGGCACTTCAAACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTSKKLE*GHFKQC Trigger: GCACTGTTTGAAGTGCCCTCACTCAAGCTTCTTGCT...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTATCCATGTTCTTGGTaGTCTCCTCTAGAGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVYPCSW*SPLERS Trigger: AGAACGCTCTAGAGGAGATCACCAAGAACATGGATA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGGGTATGCACTGTCAATaGCTGGTACATTACGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVGMHCQ*LVHYAD Trigger: ATCAGCGTAATGTACCAGGCATTGACAGTGCATACC...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCGTCTTCTTCAGAAACTaGTTAAGACTCCCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCVFFRN*LRLPED Trigger: GTCCTCTGGGAGTCTTAAGCAGTTTCTGAAGAAGAC...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTCCACAGATTCGATGTTaGACTGCATCAGCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTPQIRC*TASAPP Trigger: AGGTGGTGCTGATGCAGTGCAACATCGAATCTGTGG...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGAGCAGAAGTGTTAGATaGTGTTTGACTCCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLSRSVR*CLTPSS Trigger: GGAGGAGGGAGTCAAACACCATCTAACACTTCTGCT...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCGGTAGATCCCATTCCTaGCATCTTCAAGGAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIWARRVILTGEKGQEDCGRSHS*HLQGIC Trigger: ACAAATTCCTTGAAGATGTCAGGAATGGGATCTACC...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTGGAGTAGATGTCCACTaGTGTTGTCACGTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTGVDVH*CCHVCD Trigger: GTCACAAACGTGACAACAGCAGTGGACATCTACTCC...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR GCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTGATTCGATGTTGCACTaGATCAGCACCACCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTDSMLH*ISTTFR Trigger: ACGAAAGGTGGTGCTGATGCAGTGCAACATCGAATC...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR TCA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGGGTAGATCCCATTCCTaGCATCTTCAAGGAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLGRSHS*HLQGIC Trigger: ACAAATTCCTTGAAGATGTCAGGAATGGGATCTACC...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTCACTTCAAACAGTGCTaGGTGGAACAGAAGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQGAPKALLNNMGAKGNTHFKQC*VEQKFS Trigger: AGAGAACTTCTGTTCCACCCAGCACTGTTTGAAGTG...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR TCA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGTTAGCAAAAATCCTATaGAAGACAGAGCCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVLAKIL*KTEPIL Trigger: CAAGATTGGCTCTGTCTTTCATAGGATTTTTGCTAA...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | TCTCCTGCCCATGCGCCCCAGCGGGATTGTAGAACTCAGCTTCCCCAGTGCCCGGAAGTTCTCTGGCTGTaGGTCTCCGAGCAGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPAHAPQRDCRTQLPQCPEVLWL*VSEQAQ Trigger: CTGAGCCTGCTCGGAGACCAACAGCCAGAGAACTTC...CGGGCACTGGGGAAGCTGAGTTCTACAATCCCGCTGGGGCGCATGGGCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGAAGTTCTCTGGCTGTaGGTCTCCGAGCAGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLEVLWL*VSEQAQ Trigger: CTGAGCCTGCTCGGAGACCAACAGCCAGAGAACTTC...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGGTGCCGGTTCAATTaGTCCTCCAGCTTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSFPSARGPPVHTSRAGGRCRFN*SSSFSR Trigger: TCTGCTGAAGCTGGAGGACAAATTGAACCGGCACCT...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | CCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTACCGGGATGCTCTCATTaGGCATCAGGTCACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVGLLSTQVGQEAAGQLLPGCSH*ASGHSS Trigger: TGAGCTGTGACCTGATGCCAAATGAGAGCATCCCGG...TAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | CGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGCAGGTCAGCTACTAGCTCCACAGATTCGATGTaGCACTGCATCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGPPVHTSRAGGSRSATSSTDSM*HCISTT Trigger: GGTGGTGCTGATGCAGTGCAACATCGAATCTGTGGA...GCTAGTAGCTGACCTGCTGCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | CTCAGCTTCCCCAGTGCCCGTGGGCCTCCTGTCCACACAAGTAGGGCAGGAGGCAGTGTTAGATGGTGTTaGACTCCCTCCTCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSFPSARGPPVHTSRAGGSVRWC*TPSSTD Trigger: ATCTGTGGAGGAGGGAGTCAAACACCATCTAACACT...GCCTCCTGCCCTACTTGTGTGGACAGGAGGCCCACGGGCACTGGGGAAGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCCTCTGGGATCATGTGTaGGTGCCCCACGATACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IWARRVILTGEKGQEDCSLWDHV*VPHDTV Trigger: CACTGTATCGTGGGGCACCAACACATGATCCCAGAG...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 90 bp | CTGCTGATGGCTTCCTGTGGCACATATGAGGACTCGCCATTGCCCTaGATCTCCAGCACTGCCATCTCCAGTGCACACATGCCAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLMASCGTYEDSPLP*ISSTAISSAHMPKE Trigger: CTCCTTTGGCATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAGGGCAATGGCGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCTCCACAGATTCGATGTaGCACTGCATCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: IWARRVILTGEKGQEDCSSTDSM*HCISTT Trigger: GGTGGTGCTGATGCAGTGCAACATCGAATCTGTGGA...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | ATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGCAGGTGCCGGTTCAATTaGTCCTCCAGCTTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IWARRVILTGEKGQEDCSRCRFN*SSSFSR Trigger: TCTGCTGAAGCTGGAGGACAAATTGAACCGGCACCT...GCTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | ATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCCTCTGGGATCATGTGTaGGTGCCCCACGATACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IIWARRVILTGEKGQEDCLWDHV*VPHDTV Trigger: CACTGTATCGTGGGGCACCAACACATGATCCCAGAG...GCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 90 bp | CATGTGTTGGTGCCCCACGATACAGTGAGCAGCAAGAAGCTTGAGTaGGGGCACTTCAAACAGTGCTGGGTGGAACAGAAGTTCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HVLVPHDTVSSKKLE*GHFKQCWVEQKFSG Trigger: GCCAGAGAACTTCTGTTCCACCCAGCACTGTTTGAAGTGCCCTCACTCAAGCTTCTTGCTGCTCACTGTATCGTGGGGCACCAACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 90 bp | GCCAAGTCCGGGATGCTCTCATTTGGCATCAGGTCACAGCTCAGGTaGCGGTTCAATTTGTCCTCCAGCTTCAGCAGAAGTGTTAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: AKSGMLSFGIRSQLR*RFNLSSSFSRSVRW Trigger: CCATCTAACACTTCTGCTGAAGCTGGAGGACAAATTGAACCGGCACCTGAGCTGTGACCTGATGCCAAATGAGAGCATCCCGGACTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 90 bp | GGATCATGTGTTGGTGCCCCACGATACAGTGAGCAGCAAGAAGCTTaGGTGAGGGCACTTCAAACAGTGCTGGGTGGAACAGAAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSCVGAPRYSEQQEA*VRALQTVLGGTEVL Trigger: GAGAACTTCTGTTCCACCCAGCACTGTTTGAAGTGCCCTCACTCAAGCTTCTTGCTGCTCACTGTATCGTGGGGCACCAACACATGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 90 bp | GTTAGATGGTGTTTGACTCCCTCCTCCACAGATTCGATGTTGCACTaGATCAGCACCACCTTTCGTGTCTCCACTTCAGCTGGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRWCLTPSSTDSMLH*ISTTFRVSTSAGSG Trigger: TCCTGAGCCAGCTGAAGTGGAGACACGAAAGGTGGTGCTGATGCAGTGCAACATCGAATCTGTGGAGGAGGGAGTCAAACACCATCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTCCGGGATGCTCTCATTaGGCATCAGGTCACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NQGAPKALLNNMGAKGNTPGCSH*ASGHSS Trigger: TGAGCTGTGACCTGATGCCAAATGAGAGCATCCCGG...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 90 bp | CTGCGGGAATTTCAGCTAGTACAGCACTGGTATCCATGTTCTTGGTaGTCTCCTCTAGAGCGTTCTCTGGGATCATGTGTTGGTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LREFQLVQHWYPCSW*SPLERSLGSCVGAP Trigger: TGGGGCACCAACACATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAGAACATGGATACCAGTGCTGTACTAGCTGAAATTCCCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 90 bp | ATTCCACACAACCTCCACACCTTCCTCTGTATCCATGGCCAGGTATaGACTGTCAATGCCTGGTACATTACGCTGATTCACCTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: IPHNLHTFLCIHGQV*TVNAWYITLIHLFS Trigger: CGAGAAGAGGTGAATCAGCGTAATGTACCAGGCATTGACAGTGCATACCTGGCCATGGATACAGAGGAAGGTGTGGAGGTTGTGTGGAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | AACCAGGGAGCCCCTAAAGCCCTCCTAAATAATATGGGCGCGAAGGGTAATACTCTGGTATCCATGTTCTaGGTGATCTCCTCTAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NQGAPKALLNNMGAKGNTLVSMF*VISSRA Trigger: CGCTCTAGAGGAGATCACCAAGAACATGGATACCAG...AGTATTACCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | AATAATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGAGTGTTAGATGGTGTTaGACTCCCTCCTCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NNMGAKGNTDWGEGTGGLSVRWC*TPSSTD Trigger: ATCTGTGGAGGAGGGAGTCAAACACCATCTAACACT...CAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | AATATGGGCGCGAAGGGTAATACTGACTGGGGAGAAGGGACAGGAGGACTGCAGACATCTTCAAGGAATTaGTCTAATTCTAGGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NMGAKGNTDWGEGTGGLQTSSRN*SNSRAG Trigger: ACCAGCCCTAGAATTAGACAAATTCCTTGAAGATGT...CTGCAGTCCTCCTGTCCCTTCTCCCCAGTCAGTATTACCCTTCGCGCCCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS-3UTR CAA 90 bp | GTGGCTGCTGAGAAGGCCCAGGCCCACGTCTGTGCAAAACAAGTAAACAAAGTGACATCTTCAAGGAATTaGTCTAATTCTAGGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAAEKAQAHVCAKQVNKVTSSRN*SNSRAG Trigger: ACCAGCCCTAGAATTAGACAAATTCCTTGAAGATGT...CACTTTGTTTACTTGTTTTGCACAGACGTGGGCCTGGGCCTTCTCAGCAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | CTGGATGGCACTGCTGATGGCTTCCTGTGGCACATATaGGGACTCGCCATTGCCCTGAATCTCCAGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LDGTADGFLWHI*GLAIALNLQHC Trigger: GCAGTGCTGGAGATTCAGGGCAATGGCGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 72 bp | AGCCTCACTAATGAAGCCCAGCTGCACCAGCTCAGCTaGCAAGTCCGGGATGCTCTCATTTGGCATCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLTNEAQLHQLS*QVRDALIWHQV Trigger: GACCTGATGCCAAATGAGAGCATCCCGGACTTGGCAGCTGAGCTGGTGCAGCTGGGCTTCATTAGTGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CCA 72 bp | GCACTTCAAACAGTGCTGGGTGGAACAGAAGTTCTCTaGCTGTTGGTCTCCGAGCAGGCTCAGACTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALQTVLGGTEVL*LLVSEQAQTAG Trigger: GCCTGCAGTCTGAGCCTGCTCGGAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCACTGTTTGAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | GCTTCCTGTGGCACATATGAGGACTCGCCATTGCCCTaGATCTCCAGCACTGCCATCTCCAGTGCACACATG | + |
|
Preference number: 6 (lower is better) Translates to: ASCGTYEDSPLP*ISSTAISSAHM Trigger: CATGTGTGCACTGGAGATGGCAGTGCTGGAGATTCAGGGCAATGGCGAGTCCTCATATGTGCCACAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 90 bp | GAGACGGTGACAGTGGCTGTGTTGAGTGTACTGTTCCTGGTGAAGTaGAACTTGTTGAGCGTCTCCTCCAGCAGAGAAGTCAGGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETVTVAVLSVLFLVK*NLLSVSSSREVRRL Trigger: GAGCCGCCTGACTTCTCTGCTGGAGGAGACGCTCAACAAGTTCAACTTCACCAGGAACAGTACACTCAACACAGCCACTGTCACCGTCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | GTTGGTGCCCCACGATACAGTGAGCAGCAAGAAGCTTaGGTGAGGGCACTTCAAACAGTGCTGGGTGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: VGAPRYSEQQEA*VRALQTVLGGT Trigger: TGTTCCACCCAGCACTGTTTGAAGTGCCCTCACTCAAGCTTCTTGCTGCTCACTGTATCGTGGGGCACCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 72 bp | CAAACAGTGCTGGGTGGAACAGAAGTTCTCTGGCTGTaGGTCTCCGAGCAGGCTCAGACTGCAGGCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QTVLGGTEVLWL*VSEQAQTAGTF Trigger: AAAAGTGCCTGCAGTCTGAGCCTGCTCGGAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCACTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 72 bp | GGGATGCTCTCATTTGGCATCAGGTCACAGCTCAGGTaGCGGTTCAATTTGTCCTCCAGCTTCAGCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GMLSFGIRSQLR*RFNLSSSFSRS Trigger: ACTTCTGCTGAAGCTGGAGGACAAATTGAACCGGCACCTGAGCTGTGACCTGATGCCAAATGAGAGCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CCA 72 bp | AGAAGCTTGAGTGAGGGCACTTCAAACAGTGCTGGGTaGAACAGAAGTTCTCTGGCTGTTGGTCTCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLSEGTSNSAG*NRSSLAVGLRA Trigger: TGCTCGGAGACCAACAGCCAGAGAACTTCTGTTCCACCCAGCACTGTTTGAAGTGCCCTCACTCAAGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 72 bp | GTGTTGAGTGTACTGTTCCTGGTGAAGTTGAACTTGTaGAGCGTCTCCTCCAGCAGAGAAGTCAGGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLSVLFLVKLNL*SVSSSREVRRL Trigger: GAGCCGCCTGACTTCTCTGCTGGAGGAGACGCTCAACAAGTTCAACTTCACCAGGAACAGTACACTCAACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 90 bp | GGCCCTGCGGGAATTTCAGCTAGTACAGCACTGGTATCCATGTTCTaGGTGATCTCCTCTAGAGCGTTCTCTGGGATCATGTGTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPAGISASTALVSMF*VISSRAFSGIMCWC Trigger: GCACCAACACATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAGAACATGGATACCAGTGCTGTACTAGCTGAAATTCCCGCAGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 90 bp | AGAAGTGTTAGATGGTGTTTGACTCCCTCCTCCACAGATTCGATGTaGCACTGCATCAGCACCACCTTTCGTGTCTCCACTTCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSVRWCLTPSSTDSM*HCISTTFRVSTSAG Trigger: GCCAGCTGAAGTGGAGACACGAAAGGTGGTGCTGATGCAGTGCAACATCGAATCTGTGGAGGAGGGAGTCAAACACCATCTAACACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | TTCTCTGGGATCATGTGTTGGTGCCCCACGATACAGTaGGCAGCAAGAAGCTTGAGTGAGGGCACTTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSGIMCWCPTIQ*AARSLSEGTSN Trigger: GTTTGAAGTGCCCTCACTCAAGCTTCTTGCTGCTCACTGTATCGTGGGGCACCAACACATGATCCCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 72 bp | TGTTTGACTCCCTCCTCCACAGATTCGATGTTGCACTaGATCAGCACCACCTTTCGTGTCTCCACTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLTPSSTDSMLH*ISTTFRVSTSA Trigger: AGCTGAAGTGGAGACACGAAAGGTGGTGCTGATGCAGTGCAACATCGAATCTGTGGAGGAGGGAGTCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 72 bp | AGATGGTGTTTGACTCCCTCCTCCACAGATTCGATGTaGCACTGCATCAGCACCACCTTTCGTGTCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RWCLTPSSTDSM*HCISTTFRVST Trigger: AGTGGAGACACGAAAGGTGGTGCTGATGCAGTGCAACATCGAATCTGTGGAGGAGGGAGTCAAACACCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 90 bp | ATGCTCTCATTTGGCATCAGGTCACAGCTCAGGTGCCGGTTCAATTaGTCCTCCAGCTTCAGCAGAAGTGTTAGATGGTGTTTGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLSFGIRSQLRCRFN*SSSFSRSVRWCLTP Trigger: GGGAGTCAAACACCATCTAACACTTCTGCTGAAGCTGGAGGACAAATTGAACCGGCACCTGAGCTGTGACCTGATGCCAAATGAGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | TCTGTAATGAGTCTTCTAGTAGCTGGATGGCACTGCTaGTGGCTTCCTGTGGCACATATGAGGACTCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVMSLLVAGWHC*WLPVAHMRTRH Trigger: ATGGCGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGCTACTAGAAGACTCATTACAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS GCA 72 bp | AACCTCCACACCTTCCTCTGTATCCATGGCCAGGTATaGACTGTCAATGCCTGGTACATTACGCTGATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: NLHTFLCIHGQV*TVNAWYITLIH Trigger: GTGAATCAGCGTAATGTACCAGGCATTGACAGTGCATACCTGGCCATGGATACAGAGGAAGGTGTGGAGGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
||
| CDS GCA 72 bp | CTCCAGTGCACACATGCCAAAGGAGTAGATGTCCACTaGTGTTGTCACGTTTGTGACTTCTCCATACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQCTHAKGVDVH*CCHVCDFSILW Trigger: CCAGAGTATGGAGAAGTCACAAACGTGACAACAGCAGTGGACATCTACTCCTTTGGCATGTGTGCACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031034.12 ENSMUST00000202505.2 ENSMUST00000202576.4 |
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| CDS CCA 72 bp | CTCTGTATCCATGGCCAGGTATGCACTGTCAATGCCTaGTACATTACGCTGATTCACCTCTTCTCGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCIHGQVCTVNA*YITLIHLFSPL Trigger: AAGAGGCGAGAAGAGGTGAATCAGCGTAATGTACCAGGCATTGACAGTGCATACCTGGCCATGGATACAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 72 bp | TTTGGCATCAGGTCACAGCTCAGGTGCCGGTTCAATTaGTCCTCCAGCTTCAGCAGAAGTGTTAGATGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FGIRSQLRCRFN*SSSFSRSVRWC Trigger: ACACCATCTAACACTTCTGCTGAAGCTGGAGGACAAATTGAACCGGCACCTGAGCTGTGACCTGATGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 72 bp | ACAGTGGCTGTGTTGAGTGTACTGTTCCTGGTGAAGTaGAACTTGTTGAGCGTCTCCTCCAGCAGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: TVAVLSVLFLVK*NLLSVSSSREV Trigger: GACTTCTCTGCTGGAGGAGACGCTCAACAAGTTCAACTTCACCAGGAACAGTACACTCAACACAGCCACTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | GTTGGTCTCCGAGCAGGCTCAGACTGCAGGCACTTTTaGATAAACTCCCTCTGTAATGAGTCTTCTAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VGLRAGSDCRHF*INSLCNESSSS Trigger: GCTACTAGAAGACTCATTACAGAGGGAGTTTATTCAAAAGTGCCTGCAGTCTGAGCCTGCTCGGAGACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS CAA 72 bp | GGAATTTCAGCTAGTACAGCACTGGTATCCATGTTCTaGGTGATCTCCTCTAGAGCGTTCTCTGGGATCATG | + |
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Preference number: 6 (lower is better) Translates to: GISASTALVSMF*VISSRAFSGIM Trigger: CATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAGAACATGGATACCAGTGCTGTACTAGCTGAAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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| CDS TCA 72 bp | TTTCAGCTAGTACAGCACTGGTATCCATGTTCTTGGTaGTCTCCTCTAGAGCGTTCTCTGGGATCATGTGTT | + |
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Preference number: 6 (lower is better) Translates to: FQLVQHWYPCSW*SPLERSLGSCV Trigger: AACACATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAGAACATGGATACCAGTGCTGTACTAGCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031034.12 ENSMUST00000202576.4 |
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