Pregenerated sensors for NRBF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075000Ensembl transcript IDs: ENSMUST00000077839.13, ENSMUST00000159002.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGCGCTTTCAACCGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAGTTCCAGTGATAAGTaGGCCTGCTCAGACTCGGTC | + |
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Preference number: 2 (lower is better) Translates to: LRFQPLLSLCSLPPLLDESSSDK*ACSDSV Trigger: GACCGAGTCTGAGCAGGCTCACTTATCACTGGAACT...CTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTGAAAGCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| 3UTR-3UTR CCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACGACTTTCCCAGGTCCTaGCACCACCTCTTCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RTVPSGSVYLTHHISNKHDFPRS*HHLFSH Trigger: GTGGGAGAAGAGGTGGTGCCAGGACCTGGGAAAGTC...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR GCA 90 bp | ACGTGGCACGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAACAAGAGTTCAGTGTCTaGCGAGTCGGAATCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: TWHVQFHLEACILHTTSQQEFSV*RVGIMS Trigger: GCTCATGATTCCGACTCGGCAGACACTGAACTCTTG...TTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACGTGCCACGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR TCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAGTGATGTTTCACAGTaGCTTTCCCAGGTCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RTVPSGSVYLTHHISNKHSDVSQ*LSQVLA Trigger: TGCCAGGACCTGGGAAAGTCACTGTGAAACATCACT...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATATGAAGGAGCATCTCTaGCATTCCCCTGGGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: WKRVSYTPHLKQTQCAENMKEHL*HSPGAW Trigger: CCACGCCCCAGGGGAATGCCAGAGATGCTCCTTCAT...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATTCTCTGGCATTCCCCTaGGGCGTGGCTTTCCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: WKRVSYTPHLKQTQCAENSLAFP*GVAFPF Trigger: AAAAGGGAAAGCCACGCCCCAGGGGAATGCCAGAGA...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR TCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACCGTGACGAAGGTAAGTaGTGTTTCACAGTGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: RTVPSGSVYLTHHISNKHRDEGK*CFTVTF Trigger: GAAAGTCACTGTGAAACATCACTTACCTTCGTCACG...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATGCCGAGTCGGAATCATaGGCTTTAGTCGTGACGAAG | + |
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Preference number: 2 (lower is better) Translates to: WKRVSYTPHLKQTQCAENAESES*ALVVTK Trigger: CTTCGTCACGACTAAAGCTCATGATTCCGACTCGGC...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATCCACAGCATACCAGATaGAGGAGCATCTCTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: WKRVSYTPHLKQTQCAENPQHTR*RSISGI Trigger: AATGCCAGAGATGCTCCTTCATCTGGTATGCTGTGG...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGCACGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAATTTTATATTCTTTTCTaGATTAACTGTCGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TWHVQFHLEACILHTTSQFYILF*INCRQP Trigger: AGGCTGGCGACAGTTAATCCAGAAAAGAATATAAAA...TTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACGTGCCACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| 3UTR CCA 72 bp | CAAAGACCCCCTGCACCTCGGGGAGGCGCCTCTCTGTaGAAGGGATGTATGGCTGAGAAAGCAGAGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QRPPAPRGGASL*KGCMAEKAEGS Trigger: AGAGCCCTCTGCTTTCTCAGCCATACATCCCTTCCACAGAGAGGCGCCTCCCCGAGGTGCAGGGGGTCTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| 3UTR GCA 72 bp | CGTGCTCTGCTGCGCTTTCAACCGCTCCTCTCGCTTTaGTCTCTTCCACCTCTCCTGGATGAGAAGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: RALLRFQPLLSL*SLPPLLDEKQL Trigger: CAGCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTGAAAGCGCAGCAGAGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| 3UTR TCA 72 bp | GTCGGAATCATGAGCTTTAGTCGTGACGAAGGTAAGTaGTGTTTCACAGTGACTTTCCCAGGTCCTGGCACC | + |
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Preference number: 3 (lower is better) Translates to: VGIMSFSRDEGK*CFTVTFPGPGT Trigger: GGTGCCAGGACCTGGGAAAGTCACTGTGAAACATCACTTACCTTCGTCACGACTAAAGCTCATGATTCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | CAACCGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAAGCAGCTGGTTGTTGCCTTTCTGTaGCAAGAAATCGCCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: QPLLSLCSLPPLLDEKQLVVAFL*QEIASS Trigger: CGAAGAGGCGATTTCTTGTCACAGAAAGGCAACAAC...CAGCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR CCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACCATCCTCAGAGGGCCTaGGAGGTGCCTGCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RTVPSGSVYLTHHISNKHHPQRA*EVPAGG Trigger: CCCACCTGCAGGCACCTCCCAGGCCCTCTGAGGATG...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR CCA 90 bp | ACGTGGCACGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAGAAAGCAGAGGGCTCTaGCCTTCAGCATCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TWHVQFHLEACILHTTSQESRGL*PSASSE Trigger: CTCTGAGGATGCTGAAGGCCAGAGCCCTCTGCTTTC...TTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACGTGCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | CAACCGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAAGCAGCTGTTCCTTTGTCAAAGTTaGTTTCTGGAGTTGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QPLLSLCSLPPLLDEKQLFLCQS*FLELLP Trigger: AGGCAACAACTCCAGAAATCAACTTTGACAAAGGAA...CAGCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR GCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACCCGCTCCTCTCGCTTTaGTCTCTTCCACCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RTVPSGSVYLTHHISNKHPLLSL*SLPPLL Trigger: CAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGG...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAAACTTCTGCCAGGTTaGAGAGGCAGCGGCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: RTVPSGSVYLTHHISNKHKLLPG*RGSGGF Trigger: GAATCCGCCGCTGCCTCTTCAACCTGGCAGAAGTTT...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR GCA 90 bp | CAACCGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAAGCAGCTGGATTTCTGGAGTTGTTaGCTTTCTGTGACAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QPLLSLCSLPPLLDEKQLDFWSC*LSVTRN Trigger: ATTTCTTGTCACAGAAAGGCAACAACTCCAGAAATC...CAGCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR CCA 90 bp | ACGTGGCACGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAACTCTTCCACCTCTCCTaGATGAGAAGCAGCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TWHVQFHLEACILHTTSQLFHLS*MRSSCF Trigger: GAAACAGCTGCTTCTCATCCAGGAGAGGTGGAAGAG...TTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACGTGCCACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR CCA 90 bp | TTCAACCGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAAGCAGCGTCAAAGTTGATTTCTaGAGTTGTTGCCTTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FNRSSRFALFHLSWMRSSVKVDF*SCCLSV Trigger: CACAGAAAGGCAACAACTCCAGAAATCAACTTTGAC...GCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR GCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACGTTCCTTCTCAGCTGTaGCTTTCAGGAGTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RTVPSGSVYLTHHISNKHVPSQL*LSGVWP Trigger: AGGCCAGACTCCTGAAAGGCACAGCTGAGAAGGAAC...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR GCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATCGTTCCGTGCTCTGCTaGGCTTTCAACCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: WKRVSYTPHLKQTQCAENRSVLC*AFNRSS Trigger: AGAGGAGCGGTTGAAAGCGCAGCAGAGCACGGAACG...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR GCA 90 bp | CGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAAGCAGCTGTTTCATGCTTACTTGTTCTTaGTGTCTTTCCTTTGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: RSSRFALFHLSWMRSSCFMLTCS*CLSFVK Trigger: TTTGACAAAGGAAAGACAGCAAGAACAAGTAAGCAT...GAAACAGCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR CCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAGGAAGCTCTGGAGATaGGAAATCCAGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RTVPSGSVYLTHHISNKHRKLWR*EIQRRK Trigger: CTTCCTCCTCTGGATTTCCCATCTCCAGAGCTTCCT...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | CGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACTCCAATACAGGGCTCTaGTGGCTCATTCTTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTVPSGSVYLTHHISNKHSNTGL*WLILLL Trigger: CAGCAAAAGAATGAGCCATCAGAGCCCTGTATTGGA...GTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATAGTTCCAGTGATAAGTaGGCCTGCTCAGACTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: WKRVSYTPHLKQTQCAENSSSDK*ACSDSV Trigger: GACCGAGTCTGAGCAGGCTCACTTATCACTGGAACT...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | ACGTGGCACGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAGGCTCATTCTTTTGCTaGAGTAAAAACAGCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: TWHVQFHLEACILHTTSQGSFFC*SKNSNV Trigger: CACATTGCTGTTTTTACTTCAGCAAAAGAATGAGCC...TTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACGTGCCACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR CCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATTGTGGAAGGGATGTATaGCTGAGAAAGCAGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: WKRVSYTPHLKQTQCAENCGRDV*LRKQRA Trigger: AGCCCTCTGCTTTCTCAGCCATACATCCCTTCCACA...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR CCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATCATCAGAGGAAGCTCTaGAGATGGGAAATCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: WKRVSYTPHLKQTQCAENHQRKL*RWEIQR Trigger: CCTCTGGATTTCCCATCTCCAGAGCTTCCTCTGATG...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR TCA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATGTTGTTGCCTTTCTGTaGCAAGAAATCGCCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: WKRVSYTPHLKQTQCAENVVAFL*QEIASS Trigger: CGAAGAGGCGATTTCTTGTCACAGAAAGGCAACAAC...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR GCA 90 bp | ACGTGGCACGTACAGTTCCATCTGGAAGCGTGTATCTTACACACCACATCTCAAAGAGAGATATGTTGTTaGCTTTCTGTGACAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: TWHVQFHLEACILHTTSQREICC*LSVTRN Trigger: ATTTCTTGTCACAGAAAGGCAACAACATATCTCTCT...TTGAGATGTGGTGTGTAAGATACACGCTTCCAGATGGAACTGTACGTGCCACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS-3UTR CAA 90 bp | CGTGCTCTGCTGCGCTTTCAACCGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTTGCTGTCTTTCCTTaGTCAAAGTTGATTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RALLRFQPLLSLCSLPPLLAVFP*SKLISG Trigger: TCCAGAAATCAACTTTGACAAAGGAAAGACAGCAAG...GAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCGGTTGAAAGCGCAGCAGAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR CAA 90 bp | CGCTCCTCTCGCTTTGCTCTCTTCCACCTCTCCTGGATGAGAAGCAGCTGTTTCTTTCCTTTGTCAAAGTaGATTTCTGGAGTTGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: RSSRFALFHLSWMRSSCFFPLSK*ISGVVA Trigger: GGCAACAACTCCAGAAATCAACTTTGACAAAGGAAA...GAAACAGCTGCTTCTCATCCAGGAGAGGTGGAAGAGAGCAAAGCGAGAGGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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| CDS-3UTR CAA 90 bp | TGGAAGCGTGTATCTTACACACCACATCTCAAACAAACACAATGTGCAGAAAATCAAACTTCTGCCAGGTaGAAGAGGCAGCGGCGGATT | + |
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Preference number: 5 (lower is better) Translates to: WKRVSYTPHLKQTQCAENQTSAR*KRQRRI Trigger: AATCCGCCGCTGCCTCTTCAACCTGGCAGAAGTTTG...ATTTTCTGCACATTGTGTTTGTTTGAGATGTGGTGTGTAAGATACACGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077839.13 |
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| CDS CAA 72 bp | AGAGAGATATGCTTACTTGTTCTTGCTGTCTTTCCTTaGTCAAAGTTGATTTCTGGAGTTGTTGCCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: REICLLVLAVFP*SKLISGVVAFL Trigger: CAGAAAGGCAACAACTCCAGAAATCAACTTTGACAAAGGAAAGACAGCAAGAACAAGTAAGCATATCTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159002.2 |
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