Pregenerated sensors for NRAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027852Ensembl transcript IDs: ENSMUST00000029445.13, ENSMUST00000128264.6, ENSMUST00000196355.5, ENSMUST00000197678.5, ENSMUST00000199049.5, ENSMUST00000199367.5, ENSMUST00000200069.5, ENSMUST00000200457.5
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCCGAGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATaGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: QPSEEVVILKRSQVR*LCSVTESGKQEAGA Trigger: AGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACTCGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| 3UTR TCA 90 bp | CACAGGGCAGCCCCATACAACCTTGAGTGCCATCGTCACTGCTGTTaGGCTTTTTCATTCGGTACTGGCGTATCTCCCTTACCAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: HRAAPYNLECHRHCC*AFSFGTGVSPLPVC Trigger: ACACACTGGTAAGGGAGATACGCCAGTACCGAATGAAAAAGCTCAACAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTGCCCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR TCA 90 bp | CAAGCTCACACGTTCCCAGAGCTCACCAGGTACTTCCAGTCCTGGTaGGAACCACACAAGCTTTATCCTTGTAGCACTAACAGCAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: QAHTFPELTRYFQSW*EPHKLYPCSTNSRH Trigger: ATGCCTGCTGTTAGTGCTACAAGGATAAAGCTTGTGTGGTTCTCACCAGGACTGGAAGTACCTGGTGAGCTCTGGGAACGTGTGAGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR GCA 90 bp | AGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTaGTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SEEVVILKRSQVRWL*SVTESGKQEAGASL Trigger: CAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| 3UTR TCA 90 bp | ATATCTAGGCTTACCCCAGAGCTCACCAGGTACTTCCAGTCCTGGTaGGAACCACACAAGCTTTATCCTTGTAGCACTAACAGCAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: ISRLTPELTRYFQSW*EPHKLYPCSTNSRH Trigger: ATGCCTGCTGTTAGTGCTACAAGGATAAAGCTTGTGTGGTTCTCACCAGGACTGGAAGTACCTGGTGAGCTCTGGGGTAAGCCTAGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR TCA 90 bp | AAAGTGTCTTACTACATCAGCACACAGGGCAGCCCCATACAACCTTaGGTGCCATCGTCACTGCTGTTGAGCTTTTTCATTCGGTACTGG | + |
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Preference number: 1 (lower is better) Translates to: KVSYYISTQGSPIQP*VPSSLLLSFFIRYW Trigger: CCAGTACCGAATGAAAAAGCTCAACAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTGCCCTGTGTGCTGATGTAGTAAGACACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR GCA 90 bp | CATCTTTCTCCTGGGAGAATCCCAGACAGGGAAACTATCTTCATGTaGATACACAAAGCATCTGCCATCAGGTACATACACCTTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: HLSPGRIPDRETIFM*IHKASAIRYIHLSL Trigger: GAGGGAAAGGTGTATGTACCTGATGGCAGATGCTTTGTGTATGCACATGAAGATAGTTTCCCTGTCTGGGATTCTCCCAGGAGAAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR TCA 90 bp | ACCCACACCCCGTGGGAATATATGTTAGTAAGGGCATCTGAAACCTaGATTGGCTCCATTTGTTTCTGTGTTTATACTGGAAACCACCTA | + |
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Preference number: 1 (lower is better) Translates to: THTPWEYMLVRASET*IGSICFCVYTGNHL Trigger: TAGGTGGTTTCCAGTATAAACACAGAAACAAATGGAGCCAATTCAGGTTTCAGATGCCCTTACTAACATATATTCCCACGGGGTGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR TCA 90 bp | TGCCAAAACCCACACCCCGTGGGAATATATGTTAGTAAGGGCATCTaGAACCTGAATTGGCTCCATTTGTTTCTGTGTTTATACTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: CQNPHPVGIYVSKGI*NLNWLHLFLCLYWK Trigger: TTTCCAGTATAAACACAGAAACAAATGGAGCCAATTCAGGTTTCAGATGCCCTTACTAACATATATTCCCACGGGGTGTGGGTTTTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR GCA 90 bp | ATAAGAAACTGTTGTCAACAGAATGGCATGTCTAGTTTGGTTCTCTaGATCAATGTAAACTGCTTTTCAGAGGACAAAGCCAGCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: IRNCCQQNGMSSLVL*INVNCFSEDKASWR Trigger: CCTCCAGCTGGCTTTGTCCTCTGAAAAGCAGTTTACATTGATGCAGAGAACCAAACTAGACATGCCATTCTGTTGACAACAGTTTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR GCA 90 bp | CCACTTGCTTTCGGTAAGAATCACATACATAATCACACGCATGCATaGACACATGACATAAGGGCAGGTGAATTTATATCTGTGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: PLAFGKNHIHNHTHA*THDIRAGEFISVSS Trigger: TGAACTCACAGATATAAATTCACCTGCCCTTATGTCATGTGTGCATGCATGCGTGTGATTATGTATGTGATTCTTACCGAAAGCAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200457.5 |
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| 3UTR CCA 90 bp | CGGGATATGGTCAAACGGGTCAAGGTGAGTAACTTTCTCCTTAACTaGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATA | + |
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Preference number: 1 (lower is better) Translates to: RDMVKRVKVSNFLLN*SLINKLFRDPPPVI Trigger: TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAGAAAGTTACTCACCTTGACCCGTTTGACCATATCCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR TCA 90 bp | GTTTTCATTAGAATTACTGAGCTGAGTTACATCTTAGGTATCATGTaGCAAACAAAACCCACTAATGAATTATCAGGGCAAACATCAAGC | + |
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Preference number: 1 (lower is better) Translates to: VFIRITELSYILGIM*QTKPTNELSGQTSS Trigger: GCTTGATGTTTGCCCTGATAATTCATTAGTGGGTTTTGTTTGTCACATGATACCTAAGATGTAACTCAGCTCAGTAATTCTAATGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGTTTCTAGGGGAACCCAGGGCAGAGAACGACCGGGAGAGACAGGTCTATTTGCTGTGCTCAGTAACTaGGTCGGGGAAGCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVSRGTQGRERPGETGLFAVLSN*VGEAGS Trigger: GCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGC...AAATAGACCTGTCTCTCCCGGTCGTTCTCTGCCCTGGGTTCCCCTAGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCACACTTGGCTGTGCTCAGTAACTaGGTCGGGGAAGCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ASSWACFVSTVLVGKSHLAVLSN*VGEAGS Trigger: GCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGC...CAAGTGTGACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCATCAATGTAAACTGCTTTTCAGAGGACAAAGCCAGCTGGAGGCTGTGTGCTGTGCTCAGTAACTaGGTCGGGGAAGCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LCINVNCFSEDKASWRLCAVLSN*VGEAGS Trigger: GCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGC...ACACAGCCTCCAGCTGGCTTTGTCCTCTGAAAAGCAGTTTACATTGATGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGCAAGTTTTGAAACCATaGCCCGGTCCATTAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: AELIPPGGTHTASDPWSEQVLKP*PGPLAP Trigger: TGGTGCTAATGGACCGGGTCATGGTTTCAAAACTTG...CTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR-3UTR GCA 90 bp | GAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGCTGCAAAACAAGACCAAGTaGTGGTCTCAGCAGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ELIPPGGTHTASDPWSELQNKTK*WSQQLQ Trigger: CTGAAGCTGCTGAGACCAGCACTTGGTCTTGTTTTG...CAGCTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR-3UTR TCA 90 bp | ATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCGGTCAGACAGCCGAGTaGGGAGGTAGTTATTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: MEFRNSWPVRGLALCQLSGQTAE*GGSYSE Trigger: TTCAGAATAACTACCTCCTCACTCGGCTGTCTGACC...GGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAATGAATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCGGAGCTTCTCTGAGATaGAGAGAGCAGCAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LNEWNSVTLGQFVGLLCVGASLR*REQQEQ Trigger: CTGTTCCTGCTGCTCTCTGCATCTCAGAGAAGCTCC...GACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCATTCATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCATCAATGTAAACTGCTTTTCAGAGGACAAAGCCAGCTGGAGGCTGTGTGGAGCTTCTCTGAGATaGAGAGAGCAGCAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LCINVNCFSEDKASWRLCGASLR*REQQEQ Trigger: CTGTTCCTGCTGCTCTCTGCATCTCAGAGAAGCTCC...ACACAGCCTCCAGCTGGCTTTGTCCTCTGAAAAGCAGTTTACATTGATGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGAAGTGCAGCTTCAAAGTaGCTCTTTTCTGATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: WLCSVTESGKQEAGASLRSAASK*LFSDDR Trigger: TCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACT...TCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR CAA 90 bp | GGTCTCAATGAATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTaGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCACACTTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: GLNEWNSVTLGQFVG*LCVNCPCWQVTLVA Trigger: GGCAACAAGTGTGACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCATTCATTGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
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| 3UTR CAA 90 bp | CAAAGTGTCTTACTACATCAGCACACAGGGCAGCCCCATACAACCTaGAGTGCCATCGTCACTGCTGTTGAGCTTTTTCATTCGGTACTG | + |
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Preference number: 2 (lower is better) Translates to: QSVLLHQHTGQPHTT*SAIVTAVELFHSVL Trigger: CAGTACCGAATGAAAAAGCTCAACAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTGCCCTGTGTGCTGATGTAGTAAGACACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTCACCAGGTACTTCCAGTCCTGGTGAGAACCACACAAGCTTTATCCTTGTAGGTCAGACAGCCGAGTaGGGAGGTAGTTATTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SSPGTSSPGENHTSFILVGQTAE*GGSYSE Trigger: TTCAGAATAACTACCTCCTCACTCGGCTGTCTGACC...TACAAGGATAAAGCTTGTGTGGTTCTCACCAGGACTGGAAGTACCTGGTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR-3UTR GCA 90 bp | CCCCATGTGAATGATCCCAGTGTTAGCACTCAGGAGCATAGCAAATGTTTCTTCGGAGCTTCTCTGAGATaGAGAGAGCAGCAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: PHVNDPSVSTQEHSKCFFGASLR*REQQEQ Trigger: CTGTTCCTGCTGCTCTCTGCATCTCAGAGAAGCTCC...GAAGAAACATTTGCTATGCTCCTGAGTGCTAACACTGGGATCATTCACATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCAATCACACGCATGCATaGACACATGACATAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLGQFVGLLCVNCPCWQVNHTHA*THDIRA Trigger: TGCCCTTATGTCATGTGTGCATGCATGCGTGTGATT...GACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTCAGGTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAAGTGCAGCTTCAAAGTaGCTCTTTTCTGATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: RSQVRWLCSVTESGKQEASAASK*LFSDDR Trigger: TCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACT...TGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAATGAATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCACAGGTCTATTTCTCTaGTCAGACAGCCGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LNEWNSVTLGQFVGLLCVTGLFL*SDSRVR Trigger: CCTCACTCGGCTGTCTGACCAGAGAAATAGACCTGT...GACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCATTCATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTTTTCTGATGACAGAACTTTCAAAGTGTCTTACTACATCAGCACACAGGAGCCCCATACAACCTTaGGTGCCATCGTCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GSFLMTELSKCLTTSAHRSPIQP*VPSSLL Trigger: CAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCT...CCTGTGTGCTGATGTAGTAAGACACTTTGAAAGTTCTGTCATCAGAAAAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR CAA 90 bp | TGTGTCCAGTATGTCCAGCAGGCAGGTCTCACCATCAATCACCACTaGCTTTCGGTAAGAATCACATACATAATCACACGCATGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: CVQYVQQAGLTINHH*LSVRITYIITRMHA Trigger: TGCATGCATGCGTGTGATTATGTATGTGATTCTTACCGAAAGCAAGTGGTGATTGATGGTGAGACCTGCCTGCTGGACATACTGGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200457.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTCACCAGGTACTTCCAGTCCTGGTGAGAACCACACAAGCTTTATCCTTGTAAATCACACGCATGCATaGACACATGACATAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSPGTSSPGENHTSFILVNHTHA*THDIRA Trigger: TGCCCTTATGTCATGTGTGCATGCATGCGTGTGATT...TACAAGGATAAAGCTTGTGTGGTTCTCACCAGGACTGGAAGTACCTGGTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR GCA 90 bp | AGCTCACCAGGTACTTCCAGTCCTGGTGAGAACCACACAAGCTTTATCCTTGTATGCATCAATGTAAACTaGTTTTCAGAGGACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSPGTSSPGENHTSFILVCINVN*FSEDKA Trigger: GGCTTTGTCCTCTGAAAAGCAGTTTACATTGATGCA...TACAAGGATAAAGCTTGTGTGGTTCTCACCAGGACTGGAAGTACCTGGTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGCGAAGGATACCTCTTTATTTGAACAAACACATCAGCTTTTGTTAGTTGGCTGGAGGTATGGACTCTaGCTTCAGTTTCCACGTGGC | + |
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Preference number: 2 (lower is better) Translates to: VAKDTSLFEQTHQLLLVGWRYGL*LQFPRG Trigger: GCCACGTGGAAACTGAAGCCAGAGTCCATACCTCCA...GCCAACTAACAAAAGCTGATGTGTTTGTTCAAATAAAGAGGTATCCTTCGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGCGAAGGATACCTCTTTATTTGAACAAACACATCAGCTTTTGTTAGTTGGCAAGGAGATGGAGGTATaGACTCTGGCTTCAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VAKDTSLFEQTHQLLLVGKEMEV*TLASVS Trigger: GGAAACTGAAGCCAGAGTCCATACCTCCATCTCCTT...GCCAACTAACAAAAGCTGATGTGTTTGTTCAAATAAAGAGGTATCCTTCGCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGCGAAGGATACCTCTTTATTTGAACAAACACATCAGCTTTTGTTAGTTGGCAGTGCAGCTTCAAAGTaGCTCTTTTCTGATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VAKDTSLFEQTHQLLLVGSAASK*LFSDDR Trigger: TCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACT...GCCAACTAACAAAAGCTGATGTGTTTGTTCAAATAAAGAGGTATCCTTCGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGATGGGGAATTTGCTTAATGAAAACTCATTAGGAACGAGCTCAGTCAGGCTCTGTGATGCTAACTaGCTTGTTCAAGTTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: KVMGNLLNENSLGTSSVRLCDAN*LVQVLK Trigger: TTTCAAAACTTGAACAAGCCAGTTAGCATCACAGAG...CCTGACTGAGCTCGTTCCTAATGAGTTTTCATTAAGCAAATTCCCCATCACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTAACTGGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATATGTAATCCCAGCACTTaGGAGATTGATCCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLNWSLINKLFRDPPPVICNPST*EIDPGR Trigger: TCTTCCTGGATCAATCTCCCAAGTGCTGGGATTACA...TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR TCA 72 bp | GCCCCATACAACCTTGAGTGCCATCGTCACTGCTGTTaGGCTTTTTCATTCGGTACTGGCGTATCTCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: APYNLECHRHCC*AFSFGTGVSPL Trigger: TAAGGGAGATACGCCAGTACCGAATGAAAAAGCTCAACAGCAGTGACGATGGCACTCAAGGTTGTATGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR GCA 72 bp | GTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTaGTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: VVILKRSQVRWL*SVTESGKQEAG Trigger: TCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| 3UTR CCA 72 bp | GAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATaGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: EEVVILKRSQVR*LCSVTESGKQE Trigger: TTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| 3UTR CCA 72 bp | ATCAATGTAAACTGCTTTTCAGAGGACAAAGCCAGCTaGAGGCTGTGTCTGTTTCTAGGGGAACCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: INVNCFSEDKAS*RLCLFLGEPRA Trigger: TGCCCTGGGTTCCCCTAGAAACAGACACAGCCTCCAGCTGGCTTTGTCCTCTGAAAAGCAGTTTACATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| 3UTR TCA 72 bp | TACTACATCAGCACACAGGGCAGCCCCATACAACCTTaGGTGCCATCGTCACTGCTGTTGAGCTTTTTCATT | + |
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Preference number: 3 (lower is better) Translates to: YYISTQGSPIQP*VPSSLLLSFFI Trigger: AATGAAAAAGCTCAACAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTGCCCTGTGTGCTGATGTAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
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| 3UTR-3UTR CAA 90 bp | ACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCTTTCACACGCTTAATTaGCTCCCTGTAGAGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLGQFVGLLCVNCPCWQVFHTLN*LPVEVN Trigger: ATTAACCTCTACAGGGAGCAAATTAAGCGTGTGAAA...GACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| 3UTR GCA 72 bp | CCTGGGAGAATCCCAGACAGGGAAACTATCTTCATGTaGATACACAAAGCATCTGCCATCAGGTACATACAC | + |
|
Preference number: 3 (lower is better) Translates to: PGRIPDRETIFM*IHKASAIRYIH Trigger: GTGTATGTACCTGATGGCAGATGCTTTGTGTATGCACATGAAGATAGTTTCCCTGTCTGGGATTCTCCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCTTTCACACGCTTAATTaGCTCCCTGTAGAGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: MEFRNSWPVRGLALCQLSFHTLN*LPVEVN Trigger: ATTAACCTCTACAGGGAGCAAATTAAGCGTGTGAAA...GGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| 3UTR TCA 72 bp | TGTGATGCTAACTGGCTTGTTCAAGTTTTGAAACCATaGCCCGGTCCATTAGCACCATGGTTTAACCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CDANWLVQVLKP*PGPLAPWFNRD Trigger: ATCTCGGTTAAACCATGGTGCTAATGGACCGGGTCATGGTTTCAAAACTTGAACAAGCCAGTTAGCATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| 3UTR TCA 72 bp | CTGATCCTTGGTCGGAGCTGCCAGCTTGAGAGGTTATaGCTAAATACAAAGGAAGATAAAACCAAGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LILGRSCQLERL*LNTKEDKTKLT Trigger: TGTGAGCTTGGTTTTATCTTCCTTTGTATTTAGTCATAACCTCTCAAGCTGGCAGCTCCGACCAAGGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGTGCCTGTAATCCCAGCACTTGGGAGATTGATCCAGGAAGAGTATTGTGAGGAGTATAAGAAACTGTaGTCAACAGAATGGCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: NVPVIPALGRLIQEEYCEEYKKL*STEWHV Trigger: GACATGCCATTCTGTTGACAACAGTTTCTTATACTC...CTCACAATACTCTTCCTGGATCAATCTCCCAAGTGCTGGGATTACAGGCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| 3UTR TCA 72 bp | CCACACCCCGTGGGAATATATGTTAGTAAGGGCATCTaGAACCTGAATTGGCTCCATTTGTTTCTGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PHPVGIYVSKGI*NLNWLHLFLCL Trigger: TAAACACAGAAACAAATGGAGCCAATTCAGGTTTCAGATGCCCTTACTAACATATATTCCCACGGGGTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGATGGGGAATTTGCTTAATGAAAACTCATTAGGAACGAGCTCAGTCAGGGAGTATAAGAAACTGTaGTCAACAGAATGGCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: KVMGNLLNENSLGTSSVREYKKL*STEWHV Trigger: GACATGCCATTCTGTTGACAACAGTTTCTTATACTC...CCTGACTGAGCTCGTTCCTAATGAGTTTTCATTAAGCAAATTCCCCATCACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| 3UTR TCA 72 bp | ATTCTTCTCTCGAGTAGCGAAGGATACCTCTTTATTTaGACAAACACATCAGCTTTTGTTAGTTGGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ILLSSSEGYLFI*TNTSAFVSWQP Trigger: AGGCTGCCAACTAACAAAAGCTGATGTGTTTGTTCAAATAAAGAGGTATCCTTCGCTACTCGAGAGAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| 3UTR TCA 72 bp | CCGTGGGAATATATGTTAGTAAGGGCATCTGAAACCTaGATTGGCTCCATTTGTTTCTGTGTTTATACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PWEYMLVRASET*IGSICFCVYTG Trigger: TCCAGTATAAACACAGAAACAAATGGAGCCAATTCAGGTTTCAGATGCCCTTACTAACATATATTCCCACGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| 3UTR GCA 72 bp | CTTGCTTTCGGTAAGAATCATAATCACACGCATGCATaGACACATGACATAAGGGCAGGTGAATTTATATCT | + |
|
Preference number: 3 (lower is better) Translates to: LAFGKNHNHTHA*THDIRAGEFIS Trigger: AGATATAAATTCACCTGCCCTTATGTCATGTGTGCATGCATGCGTGTGATTATGATTCTTACCGAAAGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
||
| 3UTR TCA 72 bp | CTAATGAATTATCAGGGCAAACATCAAGCCTCCAAGTaGCAACAATCAATGGCATTTTACATTCTTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LMNYQGKHQASK*QQSMAFYILLS Trigger: CGAGAGAAGAATGTAAAATGCCATTGATTGTTGTCACTTGGAGGCTTGATGTTTGCCCTGATAATTCATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGCTGCTGTCGGGTCTTGGCTaGGGTCTCAATGAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELIPPGGTHTASDPWSELLSGLG*GLNEWN Trigger: ATTCCATTCATTGAGACCTCAGCCAAGACCCGACAG...CAGCTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| CDS-3UTR TCA 90 bp | TGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGACTGTCGGGTCTTGGCTaGGGTCTCAATGAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WLCSVTESGKQEAGASLRLSGLG*GLNEWN Trigger: ATTCCATTCATTGAGACCTCAGCCAAGACCCGACAG...TCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGACTCTTGGCCAGTTCGTaGGCTTGCTTTGTGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: WLCSVTESGKQEAGASLRLLASS*ACFVST Trigger: AGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAG...TCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGGAATTCCGTAACTCTTaGCCAGTTCGTGGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AELIPPGGTHTASDPWSEEFRNS*PVRGLA Trigger: AGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTC...CTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| CDS-3UTR TCA 90 bp | CCGAGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTGCTCAAGCCCCATACAACCTTaGGTGCCATCGTCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSEEVVILKRSQVRWLCSSPIQP*VPSSLL Trigger: CAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCT...TGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCTAGGGGAACCCAGGGCAGAGAACGACCGGGAGAGACAGGTCTATTTTTTCCCAACACCACCTaGTCCAACCACCACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRGTQGRERPGETGLFFPNTT*SNHHQF Trigger: AAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAA...AAATAGACCTGTCTCTCCCGGTCGTTCTCTGCCCTGGGTTCCCCTAGAAACAGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
||
| CDS-3UTR GCA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTTTTCCCAACACCACCTaGTCCAACCACCACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRWLCSVTESGKQEAGASFPNTT*SNHHQF Trigger: AAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAA...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR GCA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTGCCAGTTCGTGGGCTTaGTTTGTGTCAACTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRWLCSVTESGKQEAGASASSWA*FVSTVL Trigger: AAGGACAGTTGACACAAAGCAAGCCCACGAACTGGC...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGCTGGTCAACTGTCCTTGTTaGCAAGTCACACTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELIPPGGTHTASDPWSELVNCPC*QVTLVA Trigger: GGCAACAAGTGTGACTTGCCAACAAGGACAGTTGAC...CAGCTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| CDS-3UTR CCA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTGAATTCCGTAACTCTTaGCCAGTTCGTGGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRWLCSVTESGKQEAGASEFRNS*PVRGLA Trigger: AGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTC...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGATGCAGAGAATTCCGTAACTCTTaGCCAGTTCGTGGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVTESGKQEAGASLRCREFRNS*PVRGLA Trigger: AGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTC...TCTGCATCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTGTCAACTGTCCTTGTTaGCAAGTCACACTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRWLCSVTESGKQEAGASVNCPC*QVTLVA Trigger: GGCAACAAGTGTGACTTGCCAACAAGGACAGTTGAC...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR TCA 90 bp | CCCCATGTGAATGATCCCAGTGTTAGCACTCAGGAGCATAGCAAATGTTTCTTCAGCCCCATACAACCTTaGGTGCCATCGTCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHVNDPSVSTQEHSKCFFSPIQP*VPSSLL Trigger: CAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCT...GAAGAAACATTTGCTATGCTCCTGAGTGCTAACACTGGGATCATTCACATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CCA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTTCCACAAAGTGGTTCTaGATTAGCTGGATCGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRWLCSVTESGKQEAGASSTKWF*ISWIVK Trigger: CTTGACGATCCAGCTAATCCAGAACCACTTTGTGGA...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | GGCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCACACTTTCCACAAAGTGGTTCTaGATTAGCTGGATCGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQFVGLLCVNCPCWQVTLSTKWF*ISWIVK Trigger: CTTGACGATCCAGCTAATCCAGAACCACTTTGTGGA...AAGTGTGACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGCTGTATTCATCCACAAAGTaGTTCTGGATTAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELIPPGGTHTASDPWSELYSSTK*FWISWI Trigger: GATCCAGCTAATCCAGAACCACTTTGTGGATGAATA...CAGCTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCTAATTCCACCAGGTGGAACGCACACAGCTTCTGATCCTTGGTCGGAGGGTAAGAATCCTCTATaGTGGGATCATATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AELIPPGGTHTASDPWSEGKNPL*WDHIHP Trigger: TGGATGAATATGATCCCACCATAGAGGATTCTTACC...CTCCGACCAAGGATCAGAAGCTGTGTGCGTTCCACCTGGTGGAATTAGCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| CDS-3UTR CCA 90 bp | CCGAGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTGCTCATGCCTACCAGCACCATaGGGACATCATCAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSEEVVILKRSQVRWLCSCLPAP*GHHQNL Trigger: AAGATTCTGATGATGTCCCCATGGTGCTGGTAGGCA...TGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGATGCAGATTTTTCATTCGGTACTaGCGTATCTCCCTTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVTESGKQEAGASLRCRFFIRY*RISLTS Trigger: ACTGGTAAGGGAGATACGCCAGTACCGAATGAAAAA...TCTGCATCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| 3UTR CAA 72 bp | GAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTaGTGTCAACTGTCCTTGTTGGCAAGTCACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFRNSWPVRGLA*CQLSLLASHTC Trigger: ACAAGTGTGACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| 3UTR CAA 72 bp | GAATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTaGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EWNSVTLGQFVG*LCVNCPCWQVT Trigger: TGTGACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| 3UTR CAA 72 bp | TTACTACATCAGCACACAGGGCAGCCCCATACAACCTaGAGTGCCATCGTCACTGCTGTTGAGCTTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHQHTGQPHTT*SAIVTAVELFH Trigger: ATGAAAAAGCTCAACAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTGCCCTGTGTGCTGATGTAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
||
| CDS-3UTR TCA 90 bp | AGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACAGAACTTCTGTCGGGTCTTGGCTaGGGTCTCAATGAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTRASVQLQSGSFLMTELLSGLG*GLNEWN Trigger: ATTCCATTCATTGAGACCTCAGCCAAGACCCGACAG...AAGTTCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR GCA 90 bp | GAATGCAAACCCCATGTGAATGATCCCAGTGTTAGCACTCAGGAGCATAGCAAATTTCCCAACACCACCTaGTCCAACCACCACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ECKPHVNDPSVSTQEHSKFPNTT*SNHHQF Trigger: AAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAA...TTTGCTATGCTCCTGAGTGCTAACACTGGGATCATTCACATGGGGTTTGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR GCA 90 bp | AATGTGCCTGTAATCCCAGCACTTGGGAGATTGATCCAGGAAGAGTATTGTGAGTTTCCCAACACCACCTaGTCCAACCACCACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVPVIPALGRLIQEEYCEFPNTT*SNHHQF Trigger: AAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAA...CTCACAATACTCTTCCTGGATCAATCTCCCAAGTGCTGGGATTACAGGCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR GCA 90 bp | CTTGTTGCCTACCAGCACCATGGGGACATCATCAGAATCTTTCACACGCTTAATTTTCCCAACACCACCTaGTCCAACCACCACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVAYQHHGDIIRIFHTLNFPNTT*SNHHQF Trigger: AAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAA...ATTAAGCGTGTGAAAGATTCTGATGATGTCCCCATGGTGCTGGTAGGCAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| CDS-3UTR GCA 90 bp | CCCCATGTGAATGATCCCAGTGTTAGCACTCAGGAGCATAGCAAATGTTTCTTCGCCAGTTCGTGGGCTTaGTTTGTGTCAACTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHVNDPSVSTQEHSKCFFASSWA*FVSTVL Trigger: AAGGACAGTTGACACAAAGCAAGCCCACGAACTGGC...GAAGAAACATTTGCTATGCTCCTGAGTGCTAACACTGGGATCATTCACATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTGCTCAGTAGCCAGTTCGTGGGCTTaGTTTGTGTCAACTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEEVVILKRSQVRWLCSVASSWA*FVSTVL Trigger: AAGGACAGTTGACACAAAGCAAGCCCACGAACTGGC...TACTGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | CGTGGGCTTGCTTTGTGTCAACTGTCCTTGTTGGCAAGTCACACTTGTTGCCTATCCACAAAGTGGTTCTaGATTAGCTGGATCGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLALCQLSLLASHTCCLSTKWF*ISWIVK Trigger: CTTGACGATCCAGCTAATCCAGAACCACTTTGTGGA...TAGGCAACAAGTGTGACTTGCCAACAAGGACAGTTGACACAAAGCAAGCCCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCAGGTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCATATTCATCCACAAAGTaGTTCTGGATTAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSQVRWLCSVTESGKQEAYSSTK*FWISWI Trigger: GATCCAGCTAATCCAGAACCACTTTGTGGATGAATA...TGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGATGCAGAGGTAAGAATCCTCTATaGTGGGATCATATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVTESGKQEAGASLRCRGKNPL*WDHIHP Trigger: TGGATGAATATGATCCCACCATAGAGGATTCTTACC...TCTGCATCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CCA 90 bp | CAGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACAGAACTTGCCTACCAGCACCATaGGGACATCATCAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNQGISAASKWLFSDDRTCLPAP*GHHQNL Trigger: AAGATTCTGATGATGTCCCCATGGTGCTGGTAGGCA...AGTTCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CCA 90 bp | CAGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACAGAACTGTCAACTGTCCTTGTTaGCAAGTCACACTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNQGISAASKWLFSDDRTVNCPC*QVTLVA Trigger: GGCAACAAGTGTGACTTGCCAACAAGGACAGTTGAC...AGTTCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CCA 90 bp | AGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACAGAACTTCTCTTGGCCAGTTCGTaGGCTTGCTTTGTGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RTRASVQLQSGSFLMTELLLASS*ACFVST Trigger: AGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAG...AAGTTCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR TCA 90 bp | AATGGCATGTCTAGTTTGGTTCTCTGCATCAATGTAAACTGCTTTTCAGAGGACAGCCCCATACAACCTTaGGTGCCATCGTCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGMSSLVLCINVNCFSEDSPIQP*VPSSLL Trigger: CAGCAGTGACGATGGCACTCAAGGTTGTATGGGGCT...GTCCTCTGAAAAGCAGTTTACATTGATGCAGAGAACCAAACTAGACATGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CCA 90 bp | CAGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACAGAACTTCCACAAAGTGGTTCTaGATTAGCTGGATCGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNQGISAASKWLFSDDRTSTKWF*ISWIVK Trigger: CTTGACGATCCAGCTAATCCAGAACCACTTTGTGGA...AGTTCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| CDS-3UTR CCA 90 bp | ATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCAACTGTCCTATTCATCCACAAAGTaGTTCTGGATTAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: MEFRNSWPVRGLALCQLSYSSTK*FWISWI Trigger: GATCCAGCTAATCCAGAACCACTTTGTGGATGAATA...GGACAGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
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| CDS-3UTR CCA 90 bp | TTCATGTGCATACACAAAGCATCTGCCATCAGGTACATACACCTTTCCCTCAAACTCTTGGCCAGTTCGTaGGCTTGCTTTGTGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FMCIHKASAIRYIHLSLKLLASS*ACFVST Trigger: AGTTGACACAAAGCAAGCCCACGAACTGGCCAAGAG...TTTGAGGGAAAGGTGTATGTACCTGATGGCAGATGCTTTGTGTATGCACATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| 3UTR CAA 72 bp | TATGTCCAGCAGGCAGGTCTCACCATCAATCACCACTaGCTTTCGGTAAGAATCATAATCACACGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YVQQAGLTINHH*LSVRIIITRMH Trigger: ATGCATGCGTGTGATTATGATTCTTACCGAAAGCAAGTGGTGATTGATGGTGAGACCTGCCTGCTGGACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128264.6 |
||
| CDS-3UTR CCA 90 bp | CTCAATGAATGGAATTCCGTAACTCTTGGCCAGTTCGTGGGCTTGCTTTGTGTCTATTCATCCACAAAGTaGTTCTGGATTAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LNEWNSVTLGQFVGLLCVYSSTK*FWISWI Trigger: GATCCAGCTAATCCAGAACCACTTTGTGGATGAATA...GACACAAAGCAAGCCCACGAACTGGCCAAGAGTTACGGAATTCCATTCATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128264.6 ENSMUST00000200457.5 |
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| CDS-3UTR CCA 90 bp | AAGGTGATGGGGAATTTGCTTAATGAAAACTCATTAGGAACGAGCTCAGTCAGGTGCCTACCAGCACCATaGGGACATCATCAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVMGNLLNENSLGTSSVRCLPAP*GHHQNL Trigger: AAGATTCTGATGATGTCCCCATGGTGCTGGTAGGCA...CCTGACTGAGCTCGTTCCTAATGAGTTTTCATTAAGCAAATTCCCCATCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CCA 90 bp | TTCATGTGCATACACAAAGCATCTGCCATCAGGTACATACACCTTTCCCTCAAATTTTTCATTCGGTACTaGCGTATCTCCCTTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FMCIHKASAIRYIHLSLKFFIRY*RISLTS Trigger: ACTGGTAAGGGAGATACGCCAGTACCGAATGAAAAA...TTTGAGGGAAAGGTGTATGTACCTGATGGCAGATGCTTTGTGTATGCACATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| CDS-3UTR CCA 90 bp | AATGGCATGTCTAGTTTGGTTCTCTGCATCAATGTAAACTGCTTTTCAGAGGACTTTTTCATTCGGTACTaGCGTATCTCCCTTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGMSSLVLCINVNCFSEDFFIRY*RISLTS Trigger: ACTGGTAAGGGAGATACGCCAGTACCGAATGAAAAA...GTCCTCTGAAAAGCAGTTTACATTGATGCAGAGAACCAAACTAGACATGCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR TCA 90 bp | GTAACAACATGCCAATTTTTACAGTATCTATACTATAAATGGAGGGCTTCCTGGCATCGTCACTGCTGTTaGGCTTTTTCATTCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VTTCQFLQYLYYKWRASWHRHCC*AFSFGT Trigger: AGTACCGAATGAAAAAGCTCAACAGCAGTGACGATG...CCAGGAAGCCCTCCATTTATAGTATAGATACTGTAAAAATTGGCATGTTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAACTGGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATACATCGTCACTGCTGTTaGGCTTTTTCATTCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLNWSLINKLFRDPPPVIHRHCC*AFSFGT Trigger: AGTACCGAATGAAAAAGCTCAACAGCAGTGACGATG...TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTAACTGGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATATCCACAAAGTGGTTCTaGATTAGCTGGATCGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNWSLINKLFRDPPPVISTKWF*ISWIVK Trigger: CTTGACGATCCAGCTAATCCAGAACCACTTTGTGGA...TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CCA 90 bp | GTAGCGAAGGATACCTCTTTATTTGAACAAACACATCAGCTTTTGTTAGTTGGCTATTCATCCACAAAGTaGTTCTGGATTAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VAKDTSLFEQTHQLLLVGYSSTK*FWISWI Trigger: GATCCAGCTAATCCAGAACCACTTTGTGGATGAATA...GCCAACTAACAAAAGCTGATGTGTTTGTTCAAATAAAGAGGTATCCTTCGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR CAA 72 bp | ATAAGAAACTGTTGTCAACAGAATGGCATGTCTAGTTaGGTTCTCTGCATCAATGTAAACTGCTTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRNCCQQNGMSS*VLCINVNCFSE Trigger: CTCTGAAAAGCAGTTTACATTGATGCAGAGAACCAAACTAGACATGCCATTCTGTTGACAACAGTTTCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000128264.6 ENSMUST00000196355.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTAACTGGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATAGGTAAGAATCCTCTATaGTGGGATCATATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNWSLINKLFRDPPPVIGKNPL*WDHIHP Trigger: TGGATGAATATGATCCCACCATAGAGGATTCTTACC...TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| 3UTR CAA 72 bp | CACTTTGTTGTGAATGTTGGATTTAATTGCATGCAGTaGAGAGTATTCGTGTTTGCATTTATGAATACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HFVVNVGFNCMQ*RVFVFAFMNTE Trigger: CTCTGTATTCATAAATGCAAACACGAATACTCTCAACTGCATGCAATTAAATCCAACATTCACAACAAAGTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029445.13 |
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| CDS-3UTR CAA 90 bp | GAACGACCGGGAGAGACAGGTCTATTTCTCTGGTCAGACAGCCGAGTGAGGAGGCAGCCCCATACAACCTaGAGTGCCATCGTCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERPGETGLFLWSDSRVRRQPHTT*SAIVTA Trigger: AGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTG...CCTCCTCACTCGGCTGTCTGACCAGAGAAATAGACCTGTCTCTCCCGGTCGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGGTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGCCAGTTCGTGGGCTaGCTTTGTGTCAACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSQVRWLCSVTESGKQEAGQFVG*LCVNCP Trigger: AGGACAGTTGACACAAAGCAAGCCCACGAACTGGCC...TGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | TGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGAACACCCTGTCGGGTCTaGGCTGAGGTCTCAATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WLCSVTESGKQEAGASLRTPCRV*AEVSMN Trigger: ATTCATTGAGACCTCAGCCAAGACCCGACAGGGTGT...TCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGGTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGTTGGCAAGTCACACTaGTTGCCTACCAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSQVRWLCSVTESGKQEAVGKSH*LPTSTM Trigger: CATGGTGCTGGTAGGCAACAAGTGTGACTTGCCAAC...TGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTGTTGGCAAGTCACACTaGTTGCCTACCAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VRWLCSVTESGKQEAGASVGKSH*LPTSTM Trigger: CATGGTGCTGGTAGGCAACAAGTGTGACTTGCCAAC...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGGTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGTTCGTGGGCTTGCTTaGTGTCAACTGTCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSQVRWLCSVTESGKQEAVRGLA*CQLSLL Trigger: CAACAAGGACAGTTGACACAAAGCAAGCCCACGAAC...TGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTGTTCGTGGGCTTGCTTaGTGTCAACTGTCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRWLCSVTESGKQEAGASVRGLA*CQLSLL Trigger: CAACAAGGACAGTTGACACAAAGCAAGCCCACGAAC...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | CCGAGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTGCTCACAGCCCCATACAACCTaGAGTGCCATCGTCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSEEVVILKRSQVRWLCSQPHTT*SAIVTA Trigger: AGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTG...TGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | TGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTCTGAGATGCAGATGTCAACTGTCCTTGTaGGCAAGTCACACTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVTESGKQEAGASLRCRCQLSL*ASHTCC Trigger: GCAACAAGTGTGACTTGCCAACAAGGACAGTTGACA...TCTGCATCTCAGAGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGGTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCATGTCAACTGTCCTTGTaGGCAAGTCACACTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSQVRWLCSVTESGKQEACQLSL*ASHTCC Trigger: GCAACAAGTGTGACTTGCCAACAAGGACAGTTGACA...TGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAACCTGAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | GTTAGATGGCTGTGCTCAGTAACTGAGTCGGGGAAGCAGGAAGCAGGAGCTTCTACCATCAATCACCACTaGCTTTCGGTAAGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRWLCSVTESGKQEAGASTINHH*LSVRIL Trigger: GAGGATTCTTACCGAAAGCAAGTGGTGATTGATGGT...AGAAGCTCCTGCTTCCTGCTTCCCCGACTCAGTTACTGAGCACAGCCATCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | GAACGACCGGGAGAGACAGGTCTATTTCTCTGGTCAGACAGCCGAGTGAGGAGGTTTCACACGCTTAATTaGCTCCCTGTAGAGGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERPGETGLFLWSDSRVRRFHTLN*LPVEVN Trigger: ATTAACCTCTACAGGGAGCAAATTAAGCGTGTGAAA...CCTCCTCACTCGGCTGTCTGACCAGAGAAATAGACCTGTCTCTCCCGGTCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CAA 90 bp | TGCTTTTCAGAGGACAAAGCCAGCTGGAGGCTGTGTCTGTTTCTAGGGGAACCCTTGTGTCAACTGTCCTaGTTGGCAAGTCACACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFSEDKASWRLCLFLGEPLCQLS*LASHTC Trigger: ACAAGTGTGACTTGCCAACAAGGACAGTTGACACAA...GGGTTCCCCTAGAAACAGACACAGCCTCCAGCTGGCTTTGTCCTCTGAAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CAA 90 bp | GAATGCAAACCCCATGTGAATGATCCCAGTGTTAGCACTCAGGAGCATAGCAAAGGCCAGTTCGTGGGCTaGCTTTGTGTCAACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ECKPHVNDPSVSTQEHSKGQFVG*LCVNCP Trigger: AGGACAGTTGACACAAAGCAAGCCCACGAACTGGCC...TTTGCTATGCTCCTGAGTGCTAACACTGGGATCATTCACATGGGGTTTGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CAA 90 bp | ATTTCTCTGGTCAGACAGCCGAGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGACACCCTGTCGGGTCTaGGCTGAGGTCTCAATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISLVRQPSEEVVILKRSQTPCRV*AEVSMN Trigger: ATTCATTGAGACCTCAGCCAAGACCCGACAGGGTGT...CTGAGACCTCTTCAGAATAACTACCTCCTCACTCGGCTGTCTGACCAGAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CAA 90 bp | AGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTGCTCAGTACAGCCCCATACAACCTaGAGTGCCATCGTCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEEVVILKRSQVRWLCSVQPHTT*SAIVTA Trigger: AGCAGTGACGATGGCACTCAAGGTTGTATGGGGCTG...TACTGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
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| CDS-3UTR CAA 90 bp | GGATGTCAGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACTGTCAACTGTCCTTGTaGGCAAGTCACACTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCQNQGISAASKWLFSDDCQLSL*ASHTCC Trigger: GCAACAAGTGTGACTTGCCAACAAGGACAGTTGACA...GTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCTGACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS-3UTR CAA 90 bp | AATGTGCCTGTAATCCCAGCACTTGGGAGATTGATCCAGGAAGAGTATTGTGAGACACCCTGTCGGGTCTaGGCTGAGGTCTCAATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NVPVIPALGRLIQEEYCETPCRV*AEVSMN Trigger: ATTCATTGAGACCTCAGCCAAGACCCGACAGGGTGT...CTCACAATACTCTTCCTGGATCAATCTCCCAAGTGCTGGGATTACAGGCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | CCGAGTGAGGAGGTAGTTATTCTGAAGAGGTCTCAGGTTAGATGGCTGTGCTCATTGTGTCAACTGTCCTaGTTGGCAAGTCACACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSEEVVILKRSQVRWLCSLCQLS*LASHTC Trigger: ACAAGTGTGACTTGCCAACAAGGACAGTTGACACAA...TGAGCACAGCCATCTAACCTGAGACCTCTTCAGAATAACTACCTCCTCACTCGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000200069.5 |
||
| CDS-3UTR CAA 90 bp | CAGAACCAGGGCATCAGTGCAGCTTCAAAGTGGCTCTTTTCTGATGACAGAACTACCATCAATCACCACTaGCTTTCGGTAAGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QNQGISAASKWLFSDDRTTINHH*LSVRIL Trigger: GAGGATTCTTACCGAAAGCAAGTGGTGATTGATGGT...AGTTCTGTCATCAGAAAAGAGCCACTTTGAAGCTGCACTGATGCCCTGGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | CTCTGCATCAATGTAAACTGCTTTTCAGAGGACAAAGCCAGCTGGAGGCTGTGTTTGTGTCAACTGTCCTaGTTGGCAAGTCACACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCINVNCFSEDKASWRLCLCQLS*LASHTC Trigger: ACAAGTGTGACTTGCCAACAAGGACAGTTGACACAA...ACACAGCCTCCAGCTGGCTTTGTCCTCTGAAAAGCAGTTTACATTGATGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | GTAGCGAAGGATACCTCTTTATTTGAACAAACACATCAGCTTTTGTTAGTTGGCGGCCAGTTCGTGGGCTaGCTTTGTGTCAACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VAKDTSLFEQTHQLLLVGGQFVG*LCVNCP Trigger: AGGACAGTTGACACAAAGCAAGCCCACGAACTGGCC...GCCAACTAACAAAAGCTGATGTGTTTGTTCAAATAAAGAGGTATCCTTCGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | GAATCCCAAGGACCTCAGAATTTTAGGTATTACAAGATCAGAAGAGAAAATGGCGTTCGTGGGCTTGCTTaGTGTCAACTGTCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESQGPQNFRYYKIRRENGVRGLA*CQLSLL Trigger: CAACAAGGACAGTTGACACAAAGCAAGCCCACGAAC...GCCATTTTCTCTTCTGATCTTGTAATACCTAAAATTCTGAGGTCCTTGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | AATGGCATGTCTAGTTTGGTTCTCTGCATCAATGTAAACTGCTTTTCAGAGGACACCATCAATCACCACTaGCTTTCGGTAAGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NGMSSLVLCINVNCFSEDTINHH*LSVRIL Trigger: GAGGATTCTTACCGAAAGCAAGTGGTGATTGATGGT...GTCCTCTGAAAAGCAGTTTACATTGATGCAGAGAACCAAACTAGACATGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAACTGGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATAGTTGGCAAGTCACACTaGTTGCCTACCAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLNWSLINKLFRDPPPVIVGKSH*LPTSTM Trigger: CATGGTGCTGGTAGGCAACAAGTGTGACTTGCCAAC...TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAACTGGAGTTTAATTAATAAACTATTTAGGGATCCACCACCAGTCATATTTCACACGCTTAATTaGCTCCCTGTAGAGGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: LLNWSLINKLFRDPPPVIFHTLN*LPVEVN Trigger: ATTAACCTCTACAGGGAGCAAATTAAGCGTGTGAAA...TATGACTGGTGGTGGATCCCTAAATAGTTTATTAATTAAACTCCAGTTAAGGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 |
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| CDS CAA 72 bp | TATGTCCAGCAGGCAGGTCTCACCATCAATCACCACTaGCTTTCGGTAAGAATCCTCTATGGTGGGATCATA | + |
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Preference number: 6 (lower is better) Translates to: YVQQAGLTINHH*LSVRILYGGII Trigger: TATGATCCCACCATAGAGGATTCTTACCGAAAGCAAGTGGTGATTGATGGTGAGACCTGCCTGCTGGACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029445.13 ENSMUST00000196355.5 ENSMUST00000197678.5 ENSMUST00000199049.5 ENSMUST00000199367.5 ENSMUST00000200069.5 |
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