Pregenerated sensors for NR5A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026751Ensembl transcript IDs: ENSMUST00000028084.5, ENSMUST00000112883.8
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGGCCTTGGTGGGAGCACGCATTTCAGGGGCAGAGGTGGGGGCTaGGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SGLGGSTHFRGRGGG*ARVVEDRRQPCPVG Trigger: CCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCCCCACCTCTGCCCCTGAAATGCGTGCTCCCACCAAGGCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CCA 90 bp | GGCTTAGTGACAGGGCTCCTGGATCACCTAATGCAAGGAGTCTTTTaGAGGCAGTGGCATCCCTGCCTATTGCCCGCTGCCTGGCACCCA | + |
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Preference number: 1 (lower is better) Translates to: GLVTGLLDHLMQGVF*RQWHPCLLPAAWHP Trigger: TGGGTGCCAGGCAGCGGGCAATAGGCAGGGATGCCACTGCCTCCAAAAGACTCCTTGCATTAGGTGATCCAGGAGCCCTGTCACTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CCA 90 bp | AGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGAGTaGCTTTCAGGAGGCAAAGCAGCAGCCAGGGAACTGAAGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: RGWLRPLPRVLGPTE*LSGGKAAARELKPA Trigger: AGCTGGCTTCAGTTCCCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR GCA 90 bp | GATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTaGTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: DVQSGTEDGLGLSPE*LVLQSGFQEAKQQP Trigger: TGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR TCA 90 bp | ACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGAAGGATaGTCACACCAAAGTCCTCCTACAGGTAGAGGATCAGAATTAGAT | + |
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Preference number: 1 (lower is better) Translates to: TPDSSSLGSRALGEG*SHQSPPTGRGSELD Trigger: ATCTAATTCTGATCCTCTACCTGTAGGAGGACTTTGGTGTGATCATCCTTCTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CCA 90 bp | TGGTATCCTCTGGGGACCCAATTTAGCAAACTCAGTTTACAACAGTaGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: WYPLGTQFSKLSLQQ*TSCFSGVWRPPPLP Trigger: GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTTTGCTAAATTGGGTCCCCAGAGGATACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CCA 90 bp | GGCGGAAAGGGCTCTTTTTGCCCTACCCACTCTCATGGTATCCTCTaGGGACCCAATTTAGCAAACTCAGTTTACAACAGTGGACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GGKGSFCPTHSHGIL*GPNLANSVYNSGLP Trigger: AGGAAGTCCACTGTTGTAAACTGAGTTTGCTAAATTGGGTCCCCAGAGGATACCATGAGAGTGGGTAGGGCAAAAAGAGCCCTTTCCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CCA 90 bp | ATGGGTAGAGGGCGGAAAGGGCTCTTTTTGCCCTACCCACTCTCATaGTATCCTCTGGGGACCCAATTTAGCAAACTCAGTTTACAACAG | + |
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Preference number: 1 (lower is better) Translates to: MGRGRKGLFLPYPLS*YPLGTQFSKLSLQQ Trigger: CTGTTGTAAACTGAGTTTGCTAAATTGGGTCCCCAGAGGATACCATGAGAGTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR TCA 90 bp | CTCCTGCCCACTTCTCTCTCACACACTTTCCAAGGACTATCTAGGTaGAAGGAAAAGAATCCCAGTGACTTCAACCTTGCAGATAAATAC | + |
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Preference number: 1 (lower is better) Translates to: LLPTSLSHTFQGLSR*KEKNPSDFNLADKY Trigger: GTATTTATCTGCAAGGTTGAAGTCACTGGGATTCTTTTCCTTTCACCTAGATAGTCCTTGGAAAGTGTGTGAGAGAGAAGTGGGCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CAA 90 bp | TACCAGCCCAGCCAGCTGGTGATGGGCAGGGTTAGGGCAGGAATGTaGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YQPSQLVMGRVRAGM*ATPDSSSLGSRALG Trigger: TCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTGCCCTAACCCTGCCCATCACCAGCTGGCTGGGCTGGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGAGCCCAGCCAGCTGGTaGTGGGCAGGGTTAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSGTEDGLGLSPECLVLQSPASW*WAGLGQ Trigger: CTGCCCTAACCCTGCCCATCACCAGCTGGCTGGGCT...CTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTCCCACCAGGGAATCCTaGGCCTCCTCCTGGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: SGCPVWNRGWLRPLPRVLPTRES*ASSWDL Trigger: GAGGTCCCAGGAGGAGGCTCAGGATTCCCTGGTGGG...AAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CAA 90 bp | GTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTaGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VQSGTEDGLGLSPEC*VLQSGFQEAKQQPG Trigger: CCCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CAA 90 bp | TTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTTGTCTaGGGGCTGTGGGTCTCTGGCCTTGGTGGGAGCACGCATTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FRAAGLQGFIRALLV*GLWVSGLGGSTHFR Trigger: CCTGAAATGCGTGCTCCCACCAAGGCCAGAGACCCACAGCCCCAAGACAAGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTCCCACCAGGGAATCCTaGGCCTCCTCCTGGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPPTRES*ASSWDL Trigger: GAGGTCCCAGGAGGAGGCTCAGGATTCCCTGGTGGG...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCCCCCAGTCTGTCTCCTaGCCACTTCTCTCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: GLSQGSRRQETALSSWVGPQSVS*PLLSHT Trigger: TGTGTGAGAGAGAAGTGGGCAGGAGACAGACTGGGG...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCGAGTGCTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCAGGCCCCAGTCTGTCTCCTaGCCACTTCTCTCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: PRVLGPTEWLSGGKAAARPQSVS*PLLSHT Trigger: TGTGTGAGAGAGAAGTGGGCAGGAGACAGACTGGGG...CCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGGACTTCCTGCTTCAGTaGAGTCTGGAGACCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QSGTEDGLGLSPECLVLQDFLLQ*SLETPS Trigger: GGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTC...CTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCGGCATCCCTGCCTATTaGCCGCTGCCTGGCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: NSVYNSGLPASVESGDPLGIPAY*PLPGTQ Trigger: CTGGGTGCCAGGCAGCGGGCAATAGGCAGGGATGCC...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCGAGTGCTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCAGGATGCAAGGAGTCTTTTaGAGGCAGTGGCATCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PRVLGPTEWLSGGKAAARMQGVF*RQWHPC Trigger: GCAGGGATGCCACTGCCTCCAAAAGACTCCTTGCAT...CCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCTGGGTAGCCGGGCCCTaGGAGAAGGATGATCACACC | + |
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Preference number: 2 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPWVAGP*EKDDHT Trigger: GGTGTGATCATCCTTCTCCCAGGGCCCGGCTACCCA...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTAGCATAAGCTGTAAATCTGACGCGAAAGCAGGAAAGACAGTGGATGTCCAGACTCCTCCTCCCTaGGTAGCCGGGCCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GPSISCKSDAKAGKTVDVQTPPP*VAGPWE Trigger: CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTG...GACATCCACTGTCTTTCCTGCTTTCGCGTCAGATTTACAGCTTATGCTAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCGGCATCCCTGCCTATTaGCCGCTGCCTGGCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: DATPTLGKRCQEKALMLVGIPAY*PLPGTQ Trigger: CTGGGTGCCAGGCAGCGGGCAATAGGCAGGGATGCC...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTCCAAACACACAGCTCTaGAGCTCAGGGGCAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPPNTQL*SSGAGA Trigger: AGCCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGG...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCGGAAAGGATGACCTCTaGCCCAAGGGACATCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPGKDDL*PKGHPD Trigger: GTCTGGATGTCCCTTGGGTCAGAGGTCATCCTTTCC...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCGTCTTTTGGAGGCAGTaGCATCCCTGCCTATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPVFWRQ*HPCLLP Trigger: GGGCAATAGGCAGGGATGCCACTGCCTCCAAAAGAC...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTAGCCCAGCCAGCTGGTaGTGGGCAGGGTTAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSSPASW*WAGLGQ Trigger: CTGCCCTAACCCTGCCCATCACCAGCTGGCTGGGCT...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGAAAAGGATGGAGCCATaGGAAAGTCCTCAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: QSGTEDGLGLSPECLVLQKRMEP*ESPQHC Trigger: ACAGTGCTGAGGACTTTCTCATGGCTCCATCCTTTT...CTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCATCCCCGCCCATCCTTaGCCAAACACACAGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NSVYNSGLPASVESGDPLIPAHP*PNTQLW Trigger: CCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGAT...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGGGCAAGCAATAGCACTTCTCGGGGGTGAGGTGGGGTACAGATGCCACCTCAGTTTACAACAGTaGACTTCCTGCTTCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GRGQAIALLGGEVGYRCHLSLQQ*TSCFSG Trigger: TCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG...GTGGCATCTGTACCCCACCTCACCCCCGAGAAGTGCTATTGCTTGCCCTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CAA 90 bp | TGGAGACCCCCTCCTTTGCCCTCATTGATGCCTGTAGACCTTCCTTaGCCTCTGATAACAGGAGAGAGGGAAAGGATGACCTCTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: WRPPPLPSLMPVDLP*PLITGERERMTSDP Trigger: TGGGTCAGAGGTCATCCTTTCCCTCTCTCCTGTTATCAGAGGCAAAGGAAGGTCTACAGGCATCAATGAGGGCAAAGGAGGGGGTCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCGGAAAGGATGACCTCTaGCCCAAGGGACATCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: NSVYNSGLPASVESGDPLGKDDL*PKGHPD Trigger: GTCTGGATGTCCCTTGGGTCAGAGGTCATCCTTTCC...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCGTCTTTTGGAGGCAGTaGCATCCCTGCCTATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: NSVYNSGLPASVESGDPLVFWRQ*HPCLLP Trigger: GGGCAATAGGCAGGGATGCCACTGCCTCCAAAAGAC...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCGAGAGAGGGAAAGGATaGCCTCTGACCCAAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: DATPTLGKRCQEKALMLVERGKG*PLTQGT Trigger: TGTCCCTTGGGTCAGAGGTCATCCTTTCCCTCTCTC...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTATGCAAGGAGTCTTTTaGAGGCAGTGGCATCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSMQGVF*RQWHPC Trigger: GCAGGGATGCCACTGCCTCCAAAAGACTCCTTGCAT...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR GCA 72 bp | GTGGCGGACACAGGCCAATGGCTAGTAAAGGCAACCTaGCCCGGCCAATCCCCGCCCATCCTTGCCCAAACA | + |
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Preference number: 3 (lower is better) Translates to: VADTGQWLVKAT*PGQSPPILAQT Trigger: TGTTTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTGGCCTGTGTCCGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR CCA 72 bp | CTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGAGTaGCTTTCAGGAGGCAAAGCAGCAGCCAGGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: LRPLPRVLGPTE*LSGGKAAAREL Trigger: CAGTTCCCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTGGCATCCCTGCCTATaGCCCGCTGCCTGGCACCCA | + |
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Preference number: 3 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPWHPCL*PAAWHP Trigger: TGGGTGCCAGGCAGCGGGCAATAGGCAGGGATGCCA...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR TCA 72 bp | TCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGAAGGATaGTCACACCAAAGTCCTCCTACAGGTAGAGGATCA | + |
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Preference number: 3 (lower is better) Translates to: SSSLGSRALGEG*SHQSPPTGRGS Trigger: TGATCCTCTACCTGTAGGAGGACTTTGGTGTGATCATCCTTCTCCCAGGGCCCGGCTACCCAGGGAGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGAATGCAAGGAGTCTTTaGGAGGCAGTGGCATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: QSGTEDGLGLSPECLVLQNARSL*EAVASL Trigger: CAGGGATGCCACTGCCTCCAAAAGACTCCTTGCATT...CTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR GCA 72 bp | TCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTaGTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SGTEDGLGLSPE*LVLQSGFQEAK Trigger: CTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTAATGCAAGGAGTCTTTaGGAGGCAGTGGCATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SGCPVWNRGWLRPLPRVLNARSL*EAVASL Trigger: CAGGGATGCCACTGCCTCCAAAAGACTCCTTGCATT...AAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAGAGGGCAAGCAATAGCACTTCTCGGGGGTGAGGTGGGGTACAGATGCCACCCAGTGACTTCAACCTaGCAGATAAATACCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: GRGQAIALLGGEVGYRCHPVTST*QINTSP Trigger: TGGGCTGGTATTTATCTGCAAGGTTGAAGTCACTGG...GTGGCATCTGTACCCCACCTCACCCCCGAGAAGTGCTATTGCTTGCCCTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCCTCCTTTGCCCTCATaGATGCCTGTAGACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPPPLPS*MPVDLP Trigger: AGGAAGGTCTACAGGCATCAATGAGGGCAAAGGAGG...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| 3UTR GCA 72 bp | AGAATTAGATGGGTAGAGGGCGGAAAGGGCTCTTTTTaGCCTACCCACTCTCATGGTATCCTCTGGGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: RIRWVEGGKGSF*PTHSHGILWGP Trigger: GGGTCCCCAGAGGATACCATGAGAGTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCATCTAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR GCA 72 bp | GTCCCCATATCCCAGCTCAGTCCCCAGTCTGTCTCCTaGCCACTTCTCTCTCACACACTTTCCAAGGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: VPISQLSPQSVS*PLLSHTLSKDY Trigger: ATAGTCCTTGGAAAGTGTGTGAGAGAGAAGTGGGCAGGAGACAGACTGGGGACTGAGCTGGGATATGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CCA 72 bp | GCCAGCTTCAAGGGTAGTGGCGAGGGACCAAAAGGATaGAGCCATGAGAAAGTCCTCAGCACTGTCCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: ASFKGSGEGPKG*SHEKVLSTVLI Trigger: TATGAGGACAGTGCTGAGGACTTTCTCATGGCTCCATCCTTTTGGTCCCTCGCCACTACCCTTGAAGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CCA 72 bp | GGGCGGAAAGGGCTCTTTTTGCCCTACCCACTCTCATaGTATCCTCTGGGGACCCAATTTAGCAAACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GRKGLFLPYPLS*YPLGTQFSKLS Trigger: ACTGAGTTTGCTAAATTGGGTCCCCAGAGGATACCATGAGAGTGGGTAGGGCAAAAAGAGCCCTTTCCGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CCA 72 bp | CTGGGGACCCAATTTAGCAAACTCAGTTTACAACAGTaGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGTQFSKLSLQQ*TSCFSGVWRPP Trigger: AGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTTTGCTAAATTGGGTCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CCA 72 bp | GGCTCTTTTTGCCCTACCCACTCTCATGGTATCCTCTaGGGACCCAATTTAGCAAACTCAGTTTACAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GSFCPTHSHGIL*GPNLANSVYNS Trigger: ACTGTTGTAAACTGAGTTTGCTAAATTGGGTCCCCAGAGGATACCATGAGAGTGGGTAGGGCAAAAAGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGTTCTGCAGAGGAGGCTaGAGGGCGCTGGCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQECWLHQTPPPWVAGPWFCRGG*RALAGQ Trigger: CTGACCAGCCAGCGCCCTTCAGCCTCCTCTGCAGAA...CCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGTGGCCCTGGCTGTTGTaGGGGGCTGGCATAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QECWLHQTPPPWVAGPWEWPWLL*GAGIGL Trigger: GAGCCCTATGCCAGCCCCCCACAACAGCCAGGGCCA...CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | CAATCCCCGCCCATCCTTGCCCAAACACACAGCTCTGGAGCTCAGGGGCAGGGGTGCAGCTCTCGCACGTaGGCAGCCCGTAGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPPILAQTHSSGAQGQGCSSRT*AARSGS Trigger: GCTACCACTACGGGCTGCTCACGTGCGAGAGCTGCA...CCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGTGCAGCTCTCGCACGTaGGCAGCCCGTAGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QECWLHQTPPPWVAGPWECSSRT*AARSGS Trigger: GCTACCACTACGGGCTGCTCACGTGCGAGAGCTGCA...CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGACTCCTTGGCCTGCATaGTCAGGGCCCGCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QECWLHQTPPPWVAGPWETPWPA*SGPAPP Trigger: TGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGT...CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGGGGCACCCCCATCGGTaGTCCGGTCTCCAGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QECWLHQTPPPWVAGPWEGHPHR*SGLQLE Trigger: TTCAAGCTGGAGACCGGACCACCGATGGGGGTGCCC...CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCGCAGACAGCCCACGATaGGAGCGCGCACCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSQGSRRQETALSSWVGADSPR*ERAPGP Trigger: AGGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGC...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCTAGTAAAGGCAACCTGCCCCGGCCAATCCCCGCCCATCCTTGCCCAAAGCAGGGAGCCAGCCTaGACAGCCACTGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QWLVKATCPGQSPPILAQSREPA*TATVLS Trigger: GCTGAGCACAGTGGCTGTGCAGGCTGGCTCCCTGCT...TTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGAGTGCTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCAGGGGGCACCCCCATCGGTaGTCCGGTCTCCAGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGPTEWLSGGKAAARGHPHR*SGLQLE Trigger: TTCAAGCTGGAGACCGGACCACCGATGGGGGTGCCC...CCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CAA 72 bp | AGCCAGCTGGTGATGGGCAGGGTTAGGGCAGGAATGTaGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLVMGRVRAGM*ATPDSSSLGSR Trigger: CCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTGCCCTAACCCTGCCCATCACCAGCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGCGTCTTGTCGATTTTaGAGCTCTGACTCTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQECWLHQTPPPWVAGPWASCRF*SSDSRC Trigger: GCACCGAGAGTCAGAGCTGCAAAATCGACAAGACGC...CCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCAGCAGGGAGCCAGCCTaGACAGCCACTGTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVQSGTEDGLGLSPECLVSREPA*TATVLS Trigger: GCTGAGCACAGTGGCTGTGCAGGCTGGCTCCCTGCT...GACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGGGCAAGCAATAGCACTTCTCGGGGGTGAGGTGGGGTACAGATGCCACTCCTGGCGGTCCAGCTaGAGTGCATGCAACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGQAIALLGGEVGYRCHSWRSS*SACNWS Trigger: GCTCCAGTTGCATGCACTGCAGCTGGACCGCCAGGA...GTGGCATCTGTACCCCACCTCACCCCCGAGAAGTGCTATTGCTTGCCCTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCGGTCAGAGCGGCTTTTaGCTGGCTCCTGCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSQGSRRQETALSSWVGGQSGF*LAPADS Trigger: GCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACC...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGGGCAAGCAATAGCACTTCTCGGGGGTGAGGTGGGGTACAGATGCCACCTTTTGGCTGGCTCCTaGAGACAGCCCACGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGQAIALLGGEVGYRCHLLAGS*RQPTMR Trigger: TCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAG...GTGGCATCTGTACCCCACCTCACCCCCGAGAAGTGCTATTGCTTGCCCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCTAGTAAAGGCAACCTGCCCCGGCCAATCCCCGCCCATCCTTGCCCAACTTTTGGCTGGCTCCTaGAGACAGCCCACGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QWLVKATCPGQSPPILAQLLAGS*RQPTMR Trigger: TCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAG...TTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGTCGCTCCAACAGTTCTaGAGCAGTGTCATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQECWLHQTPPPWVAGPWSLQQF*SSVIWS Trigger: TGACCAGATGACACTGCTGCAGAACTGTTGGAGCGA...CCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCGGATGCTGTCTTCCTTaGCGTACTGGACCTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSQGSRRQETALSSWVGGCCLP*RTGPGG Trigger: ACCGCCAGGTCCAGTACGGCAAGGAAGACAGCATCC...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGCTAGTAAAGGCAACCTGCCCCGGCCAATCCCCGCCCATCCTTGCCCAACCTGCAGCATCTCAATaGGAAGGTTGTTGCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWLVKATCPGQSPPILAQPAASQ*EGCCGA Trigger: TGCCCCGCAACAACCTTCTCATTGAGATGCTGCAGG...TTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAATCCCCGCCCATCCTTGCCCAAACACACAGCTCTGGAGCTCAGGGGCAGGGGTCCTCTGGCTCTAGTTaGAGCAGCTGCAATATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPPILAQTHSSGAQGQGSSGSS*SSCNMS Trigger: GCTCATATTGCAGCTGCTGCAACTAGAGCCAGAGGA...CCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAATCCCCGCCCATCCTTGCCCAAACACACAGCTCTGGAGCTCAGGGGCAGGGGCAAGTCTGCTTGGCCTaGAGCATCTCAATGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPPILAQTHSSGAQGQGQVCLA*SISMRR Trigger: CCTTCTCATTGAGATGCTGCAGGCCAAGCAGACTTG...CCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGAATTAGATGGGTAGAGGGCGGAAAGGGCTCTTTTTGCCCTACCCACCAGCGGCCCACTGGGTaGGCCAGAGACCAGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIRIRWVEGGKGSFCPTHQRPTG*ARDQGL Trigger: AAGGCCCTGGTCTCTGGCCCACCCAGTGGGCCGCTG...GTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCATCTAATTCTGATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGTTGCCCAAATGCTTGTaGTACAGGTACTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QECWLHQTPPPWVAGPWELPKCL*YRYSLA Trigger: GGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAA...CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCTAGTAAAGGCAACCTGCCCCGGCCAATCCCCGCCCATCCTTGCCCAAGACCATGCACCTTCGTaGCCAGTCGACAATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWLVKATCPGQSPPILAQDHAPS*PVDNGD Trigger: ATCTCCATTGTCGACTGGGCACGAAGGTGCATGGTC...TTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCTGCGGGGCATCTCGTTaGCCAAATGCTTGTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLSQGSRRQETALSSWVGCGASR*PNACGT Trigger: TGTACCACAAGCATTTGGGCAACGAGATGCCCCGCA...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCAGCGGCCCACTGGGTaGGCCAGAGACCAGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTDATPTLGKRCQEKALMQRPTG*ARDQGL Trigger: AAGGCCCTGGTCTCTGGCCCACCCAGTGGGCCGCTG...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCTGGATAGCTGTAGGGTaGCCCTGGCTGTTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPWIAVG*PWLLWG Trigger: CCCCCACAACAGCCAGGGCCACCCTACAGCTATCCA...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCGGTCAGAGCGGCTTTTaGCTGGCTCCTGCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPGQSGF*LAPADS Trigger: GCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACC...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGAGTGCTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCAGGTGCAGTGCATGCAACTaGAGCACTAACTCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGPTEWLSGGKAAARCSACN*STNSWA Trigger: GGCCCAAGAGTTAGTGCTCCAGTTGCATGCACTGCA...CCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCGGTACAGGTACTCCTTaGCCTGCATGCTCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPGTGTP*PACSGP Trigger: GGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACC...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CAA 72 bp | GACAGGGCTCCTGGATCACCTAATGCAAGGAGTCTTTaGGAGGCAGTGGCATCCCTGCCTATTGCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRAPGSPNARSL*EAVASLPIARC Trigger: GCAGCGGGCAATAGGCAGGGATGCCACTGCCTCCAAAAGACTCCTTGCATTAGGTGATCCAGGAGCCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CAA 72 bp | GGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTaGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTEDGLGLSPEC*VLQSGFQEAKQ Trigger: CTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAATCCCCGCCCATCCTTGCCCAAACACACAGCTCTGGAGCTCAGGGGCAGGGGATTGGCCCGAATCTGTaGTTTCTTCTGCTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPPILAQTHSSGAQGQGIGPNL*FLLLLQ Trigger: TTGAAGCAGCAGAAGAAAGCACAGATTCGGGCCAAT...CCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCGGATGCTGTCTTCCTTaGCGTACTGGACCTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPGCCLP*RTGPGG Trigger: ACCGCCAGGTCCAGTACGGCAAGGAAGACAGCATCC...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTCCTGCACAGCCACTGTaGTCAGCTCCACCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPPAQPL*SAPPPV Trigger: GACAGGAGGTGGAGCTGAGCACAGTGGCTGTGCAGG...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGTGCGGGGCATCTCGTTaGCCAAATGCTTGTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QSGTEDGLGLSPECLVLQCGASR*PNACGT Trigger: TGTACCACAAGCATTTGGGCAACGAGATGCCCCGCA...CTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTCTGAAGGGCGCTGGCTaGTCAGAGCGGCTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPLKGAG*SERLLA Trigger: AGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAG...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCAGACAGACGAACTCCTaGCGGTCCAGCTGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPRQTNS*RSSCSA Trigger: TGCACTGCAGCTGGACCGCCAGGAGTTCGTCTGTCT...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCTTTGTCCCCGCAGTGTaGGTAGTGACACAAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLSQGSRRQETALSSWVGFVPAV*VVTQGV Trigger: TACACCTTGTGTCACTACCCACACTGCGGGGACAAA...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTGGTACAGGTACTCCTTaGCCTGCATGCTCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPGTGTP*PACSGP Trigger: GGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACC...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTAGTAAAGGCAACCTGCCCCGGCCAATCCCCGCCCATCCTTGCCCAATTGCCCAAATGCTTGTaGTACAGGTACTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWLVKATCPGQSPPILAQLPKCL*YRYSLA Trigger: GGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAA...TTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCTAGCATAAGCTGTAAATCTGACGCGAAAGCAGGAAAGACAGTGGATGTCTTCTGCAGAGGAGGCTaGAGGGCGCTGGCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSISCKSDAKAGKTVDVFCRGG*RALAGQ Trigger: CTGACCAGCCAGCGCCCTTCAGCCTCCTCTGCAGAA...GACATCCACTGTCTTTCCTGCTTTCGCGTCAGATTTACAGCTTATGCTAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGACTCCTTGGCCTGCATaGTCAGGGCCCGCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTDATPTLGKRCQEKALMTPWPA*SGPAPP Trigger: TGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGT...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDRYSLA*MLRART Trigger: GGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCT...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DATPTLGKRCQEKALMLVRYSLA*MLRART Trigger: GGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCT...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCAGAGCGGCTTTTGGCTaGCTCCTGCAGACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSVYNSGLPASVESGDPLRAAFG*LLQTAH Trigger: GTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCT...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCATGGAGATAAAGGTCTaGTCGGCCATTCTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVQSGTEDGLGLSPECLVMEIKV*SAILQR Trigger: CCTCTGCAGAATGGCCGACCAGACCTTTATCTCCAT...GACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGAATTAGATGGGTAGAGGGCGGAAAGGGCTCTTTTTGCCCTACCCACCCAACAGGGCAGCGTTaGCCTTTTCCTGGGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIRIRWVEGGKGSFCPTHPTGQR*PFPGRP Trigger: AGGACGCCCAGGAAAAGGCCAACGCTGCCCTGTTGG...GTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCATCTAATTCTGATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCAGCTTCCAGGCGCATaGCCACCGTCAGGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDATPTLGKRCQEKALMQLPGA*PPSGTS Trigger: AGAAGTGCCTGACGGTGGGCATGCGCCTGGAAGCTG...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGAGTGCTTGGTCCTACAGAGTGGCTTTCAGGAGGCAAAGCAGCAGCCAGGTCTAGTTGCAGCAGCTaGAATATGAGCTCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLGPTEWLSGGKAAARSSCSS*NMSSGT Trigger: TGTACCAGAGCTCATATTGCAGCTGCTGCAACTAGA...CCTGGCTGCTGCTTTGCCTCCTGAAAGCCACTCTGTAGGACCAAGCACTCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTGCAGACAGCCCACGATaGGAGCGCGCACCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSADSPR*ERAPGP Trigger: AGGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGC...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCGACCATGCACCTTCGTaGCCAGTCGACAATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPDHAPS*PVDNGD Trigger: ATCTCCATTGTCGACTGGGCACGAAGGTGCATGGTC...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATCCTGCACAGCCACTGTaGTCAGCTCCACCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDPAQPL*SAPPPV Trigger: GACAGGAGGTGGAGCTGAGCACAGTGGCTGTGCAGG...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTAGCATAAGCTGTAAATCTGACGCGAAAGCAGGAAAGACAGTGGATGTCTCCTGGCGGTCCAGCTaGAGTGCATGCAACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSISCKSDAKAGKTVDVSWRSS*SACNWS Trigger: GCTCCAGTTGCATGCACTGCAGCTGGACCGCCAGGA...GACATCCACTGTCTTTCCTGCTTTCGCGTCAGATTTACAGCTTATGCTAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCTGGATAGCTGTAGGGTaGCCCTGGCTGTTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DATPTLGKRCQEKALMLVWIAVG*PWLLWG Trigger: CCCCCACAACAGCCAGGGCCACCCTACAGCTATCCA...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCATGCGAGCGCGCACCTaGTCCTCCTCTGGCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DATPTLGKRCQEKALMLVMRART*SSSGSS Trigger: ACTAGAGCCAGAGGAGGACCAGGTGCGCGCTCGCAT...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTAGCATAAGCTGTAAATCTGACGCGAAAGCAGGAAAGACAGTGGATGTCATGCGAGCGCGCACCTaGTCCTCCTCTGGCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPSISCKSDAKAGKTVDVMRART*SSSGSS Trigger: ACTAGAGCCAGAGGAGGACCAGGTGCGCGCTCGCAT...GACATCCACTGTCTTTCCTGCTTTCGCGTCAGATTTACAGCTTATGCTAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATAGAGCGGCTTTTGGCTaGCTCCTGCAGACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDRAAFG*LLQTAH Trigger: GTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCT...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCCTGAAGGGCGCTGGCTaGTCAGAGCGGCTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DATPTLGKRCQEKALMLVLKGAG*SERLLA Trigger: AGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAG...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCCTACAGCACAATAGCAACTGCTaGAATTTGTCCCCGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSGTEDGLGLSPECLVLQHNSNC*NLSPQC Trigger: ACACTGCGGGGACAAATTCCAGCAGTTGCTATTGTG...CTGTAGGACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CAA 72 bp | ACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTaGCCCTCATTGATGCCTGTAGACCTTCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSCFSGVWRPPP*PSLMPVDLPLP Trigger: AGGCAAAGGAAGGTCTACAGGCATCAATGAGGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCGTCCGGTCTCCAGCTTaGAGCCATTGGCCCGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DATPTLGKRCQEKALMLVVRSPA*SHWPES Trigger: AGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGAC...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCATCTGTGCTTTCTTCTaGTGCTTCAAGGCCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPICAFF*CFKARS Trigger: AGACCGGGCCTTGAAGCAGCAGAAGAAAGCACAGAT...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCAGGCACAATAGCAACTaGTGGAATTTGTCCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPRHNSN*WNLSPQ Trigger: CTGCGGGGACAAATTCCAGCAGTTGCTATTGTGCCT...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTATCTCGTTGCCCAAATaGTTGTGGTACAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGCPVWNRGWLRPLPRVLISLPK*LWYRYS Trigger: GGAGTACCTGTACCACAAGCATTTGGGCAACGAGAT...AAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATAGACAGACGAACTCCTaGCGGTCCAGCTGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDRQTNS*RSSCSA Trigger: TGCACTGCAGCTGGACCGCCAGGAGTTCGTCTGTCT...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTAGTAAAGGCAACCTGCCCCGGCCAATCCCCGCCCATCCTTGCCCAATCCTTTACGAGGCTGTaGTTGTTCAGGAATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QWLVKATCPGQSPPILAQSFTRL*LFRNFT Trigger: TGTGAAATTCCTGAACAACCACAGCCTCGTAAAGGA...TTGGGCAAGGATGGGCGGGGATTGGCCGGGGCAGGTTGCCTTTACTAGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCAGCAGCTGCAATATaGGCTCTGGTACATTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDAAAAI*ALVHWA Trigger: GGCCCAATGTACCAGAGCTCATATTGCAGCTGCTGC...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCGGACAGCGCTTACGCTaGGTCTTGTCGATTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVYNSGLPASVESGDPLGQRLR*VLSILQ Trigger: CTGCAAAATCGACAAGACGCAGCGTAAGCGCTGTCC...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTATTGGCCCGAATCTGTaGTTTCTTCTGCTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGCPVWNRGWLRPLPRVLIGPNL*FLLLLQ Trigger: TTGAAGCAGCAGAAGAAAGCACAGATTCGGGCCAAT...AAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCATCTCGTTGCCCAAATaGTTGTGGTACAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPISLPK*LWYRYS Trigger: GGAGTACCTGTACCACAAGCATTTGGGCAACGAGAT...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTCCAACAGGGCAGCGTTaGCCTTTTCCTGGGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSPTGQR*PFPGRP Trigger: AGGACGCCCAGGAAAAGGCCAACGCTGCCCTGTTGG...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTGTCCGGTCTCCAGCTTaGAGCCATTGGCCCGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSVRSPA*SHWPES Trigger: AGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGAC...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCGTCTTGTCGATTTTaGAGCTCTGACTCTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDASCRF*SSDSRC Trigger: GCACCGAGAGTCAGAGCTGCAAAATCGACAAGACGC...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGGACAGCGCTTACGCTaGGTCTTGTCGATTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDGQRLR*VLSILQ Trigger: CTGCAAAATCGACAAGACGCAGCGTAAGCGCTGTCC...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGTGCAGTGCATGCAACTaGAGCACTAACTCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTDATPTLGKRCQEKALMCSACN*STNSWA Trigger: GGCCCAAGAGTTAGTGCTCCAGTTGCATGCACTGCA...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CAA 72 bp | CCTCCTTTGCCCTCATTGATGCCTGTAGACCTTCCTTaGCCTCTGATAACAGGAGAGAGGGAAAGGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSLMPVDLP*PLITGERERMT Trigger: GGTCATCCTTTCCCTCTCTCCTGTTATCAGAGGCAAAGGAAGGTCTACAGGCATCAATGAGGGCAAAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| 3UTR CAA 72 bp | TTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCTCATaGATGCCTGTAGACCTTCCTTTGCCTCTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSGVWRPPPLPS*MPVDLPLPLIT Trigger: TGTTATCAGAGGCAAAGGAAGGTCTACAGGCATCAATGAGGGCAAAGGAGGGGGTCTCCAGACTCCACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTCCTGCAGCATCTCAATaGGAAGGTTGTTGCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSPAASQ*EGCCGA Trigger: TGCCCCGCAACAACCTTCTCATTGAGATGCTGCAGG...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCTCCTCTGGCTCTAGTTaGAGCAGCTGCAATATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLSLQQWTSCFSGVWRPSSGSS*SSCNMS Trigger: GCTCATATTGCAGCTGCTGCAACTAGAGCCAGAGGA...GGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCTCGCTCCAACAGTTCTaGAGCAGTGTCATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLSLQQWTSCFSGVWRPSLQQF*SSVIWS Trigger: TGACCAGATGACACTGCTGCAGAACTGTTGGAGCGA...GGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATAGGCACAATAGCAACTaGTGGAATTTGTCCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYRCHPDSWKEMSGESFDRHNSN*WNLSPQ Trigger: CTGCGGGGACAAATTCCAGCAGTTGCTATTGTGCCT...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGTTTGTCCCCGCAGTGTaGGTAGTGACACAAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTDATPTLGKRCQEKALMFVPAV*VVTQGV Trigger: TACACCTTGTGTCACTACCCACACTGCGGGGACAAA...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCACAATAGCAACTGCTaGAATTTGTCCCCGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTDATPTLGKRCQEKALMHNSNC*NLSPQC Trigger: ACACTGCGGGGACAAATTCCAGCAGTTGCTATTGTG...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCTCTAGTTGCAGCAGCTaGAATATGAGCTCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DATPTLGKRCQEKALMLVSSCSS*NMSSGT Trigger: TGTACCAGAGCTCATATTGCAGCTGCTGCAACTAGA...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CCA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCTCCTTTACGAGGCTGTaGTTGTTCAGGAATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSVYNSGLPASVESGDPLSFTRL*LFRNFT Trigger: TGTGAAATTCCTGAACAACCACAGCCTCGTAAAGGA...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 90 bp | AGGCTGAAGGGCGCTGGCTGGTCAGAGCGGCTTTTGGCTGGCTCCTaGAGACAGCCCACGATGCGAGCGCGCACCTGGTCCTCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLKGAGWSERLLAGS*RQPTMRARTWSSSG Trigger: GCCAGAGGAGGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 90 bp | GCAGAGGAGGCTGAAGGGCGCTGGCTGGTCAGAGCGGCTTTTGGCTaGCTCCTGCAGACAGCCCACGATGCGAGCGCGCACCTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AEEAEGRWLVRAAFG*LLQTAHDASAHLVL Trigger: GAGGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAGCCTCCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 90 bp | TCCTGGCGGTCCAGCTGCAGTGCATGCAACTGGAGCACTAACTCTTaGGCCCGCAGCACCAGGCTGTGCAGCAGGGAGCCAGCCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SWRSSCSACNWSTNS*ARSTRLCSREPACT Trigger: TGTGCAGGCTGGCTCCCTGCTGCACAGCCTGGTGCTGCGGGCCCAAGAGTTAGTGCTCCAGTTGCATGCACTGCAGCTGGACCGCCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 90 bp | AAGGTCTGGTCGGCCATTCTGCAGAGGAGGCTGAAGGGCGCTGGCTaGTCAGAGCGGCTTTTGGCTGGCTCCTGCAGACAGCCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: KVWSAILQRRLKGAG*SERLLAGSCRQPTM Trigger: CATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAGCCTCCTCTGCAGAATGGCCGACCAGACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | CAGGAATGTTGGCTACACCAGACTCCTCCTCCCTGGGTAGCCGGGCCCTGGGAGTGGTACAGGTACTCCTaGGCCTGCATGCTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QECWLHQTPPPWVAGPWEWYRYS*ACMLRA Trigger: GGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCA...CTCCCAGGGCCCGGCTACCCAGGGAGGAGGAGTCTGGTGTAGCCAACATTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 90 bp | GATAAAGGTCTGGTCGGCCATTCTGCAGAGGAGGCTGAAGGGCGCTaGCTGGTCAGAGCGGCTTTTGGCTGGCTCCTGCAGACAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DKGLVGHSAEEAEGR*LVRAAFGWLLQTAH Trigger: GTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAGCCTCCTCTGCAGAATGGCCGACCAGACCTTTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 90 bp | TTGAGACAGACGAACTCCTGGCGGTCCAGCTGCAGTGCATGCAACTaGAGCACTAACTCTTGGGCCCGCAGCACCAGGCTGTGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRQTNSWRSSCSACN*STNSWARSTRLCSR Trigger: CCTGCTGCACAGCCTGGTGCTGCGGGCCCAAGAGTTAGTGCTCCAGTTGCATGCACTGCAGCTGGACCGCCAGGAGTTCGTCTGTCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 90 bp | CTTTTGGCTGGCTCCTGCAGACAGCCCACGATGCGAGCGCGCACCTaGTCCTCCTCTGGCTCTAGTTGCAGCAGCTGCAATATGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLAGSCRQPTMRART*SSSGSSCSSCNMSS Trigger: AGAGCTCATATTGCAGCTGCTGCAACTAGAGCCAGAGGAGGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 90 bp | TGCGGGGCATCTCGTTGCCCAAATGCTTGTGGTACAGGTACTCCTTaGCCTGCATGCTCAGGGCCCGCACCTCCACCAGGCACAATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGASRCPNACGTGTP*PACSGPAPPPGTIA Trigger: TGCTATTGTGCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGATGCCCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS GCA 90 bp | GGCATCTCGTTGCCCAAATGCTTGTGGTACAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACCTCCACCAGGCACAATAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GISLPKCLWYRYSLA*MLRARTSTRHNSNC Trigger: GCAGTTGCTATTGTGCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGATGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | CAATCCCCGCCCATCCTTGCCCAAACACACAGCTCTGGAGCTCAGGGGCAGGGGAAGAGGATGAGGAACTaGAGACAGACGAACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSPPILAQTHSSGAQGQGKRMRN*RQTNSW Trigger: CCAGGAGTTCGTCTGTCTCAAGTTCCTCATCCTCTT...CCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | CAATCCCCGCCCATCCTTGCCCAAACACACAGCTCTGGAGCTCAGGGGCAGGGGTCGTTGCCCAAATGCTaGTGGTACAGGTACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSPPILAQTHSSGAQGQGSLPKC*WYRYSL Trigger: CAAGGAGTACCTGTACCACAAGCATTTGGGCAACGA...CCCCTGCCCCTGAGCTCCAGAGCTGTGTGTTTGGGCAAGGATGGGCGGGGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGGCAAGCAATAGCACTTCTCGGGGGTGAGGTGGGGTACAGATGCCACTCAATGAGAAGGTTGTaGCGGGGCATCTCGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGQAIALLGGEVGYRCHSMRRL*RGISLP Trigger: GGGCAACGAGATGCCCCGCAACAACCTTCTCATTGA...GTGGCATCTGTACCCCACCTCACCCCCGAGAAGTGCTATTGCTTGCCCTCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS GCA 90 bp | TCTCGTTGCCCAAATGCTTGTGGTACAGGTACTCCTTGGCCTGCATaGTCAGGGCCCGCACCTCCACCAGGCACAATAGCAACTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRCPNACGTGTPWPA*SGPAPPPGTIATAG Trigger: TCCAGCAGTTGCTATTGTGCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 90 bp | AAGACCATGCACCTTCGTGCCCAGTCGACAATGGAGATAAAGGTCTaGTCGGCCATTCTGCAGAGGAGGCTGAAGGGCGCTGGCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTMHLRAQSTMEIKV*SAILQRRLKGAGWS Trigger: TGACCAGCCAGCGCCCTTCAGCCTCCTCTGCAGAATGGCCGACCAGACCTTTATCTCCATTGTCGACTGGGCACGAAGGTGCATGGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAGACAGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCGGTCCGGTCTCCAGCTaGAAGCCATTGGCCCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: RKDSGCPVWNRGWLRPLPGPVSS*KPLARI Trigger: GATTCGGGCCAATGGCTTCAAGCTGGAGACCGGACC...GGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACTGTCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | AGTGGATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTATGAGCTCTGGTACATaGGGCCCTCCTGAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGCPVWNRGWLRPLPRVLMSSGT*GPPEKG Trigger: GCCCTTCTCAGGAGGGCCCAATGTACCAGAGCTCAT...AAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GATGTCCAGTCTGGAACAGAGGATGGCTTAGGCCTCTCCCCCGAGTGCTTGGTCTTGCGGGGCATCTCGTaGCCCAAATGCTTGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DVQSGTEDGLGLSPECLVLRGIS*PKCLWY Trigger: GTACCACAAGCATTTGGGCAACGAGATGCCCCGCAA...GACCAAGCACTCGGGGGAGAGGCCTAAGCCATCCTCTGTTCCAGACTGGACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | TTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTGCCCATGAGCTCTGGTACATaGGGCCCTCCTGAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQQWTSCFSGVWRPPPLPMSSGT*GPPEKG Trigger: GCCCTTCTCAGGAGGGCCCAATGTACCAGAGCTCAT...GGGCAAAGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GGGCTGAGCCAGGGTAGTAGAAGACAGGAGACAGCCTTGTCCAGTTGGGTGGGCAAGAGGATGAGGAACTaGAGACAGACGAACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSQGSRRQETALSSWVGKRMRN*RQTNSW Trigger: CCAGGAGTTCGTCTGTCTCAAGTTCCTCATCCTCTT...GCCCACCCAACTGGACAAGGCTGTCTCCTGTCTTCTACTACCCTGGCTCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCTCCAACAGGGCAGCGTaGGCCTTTTCCTGGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSVYNSGLPASVESGDPLSNRAA*AFSWAS Trigger: GGACGCCCAGGAAAAGGCCAACGCTGCCCTGTTGGA...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGGCAAGCAATAGCACTTCTCGGGGGTGAGGTGGGGTACAGATGCCACATCTCAATGAGAAGGTaGTTGCGGGGCATCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGQAIALLGGEVGYRCHISMRR*LRGISL Trigger: CAACGAGATGCCCCGCAACAACCTTCTCATTGAGAT...GTGGCATCTGTACCCCACCTCACCCCCGAGAAGTGCTATTGCTTGCCCTCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGTCCAACAGGGCAGCGTaGGCCTTTTCCTGGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTDATPTLGKRCQEKALMSNRAA*AFSWAS Trigger: GGACGCCCAGGAAAAGGCCAACGCTGCCCTGTTGGA...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 90 bp | ACATCGAGGCTGAAGAGGATGAGGAACTTGAGACAGACGAACTCCTaGCGGTCCAGCTGCAGTGCATGCAACTGGAGCACTAACTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRLKRMRNLRQTNS*RSSCSACNWSTNSW Trigger: CCAAGAGTTAGTGCTCCAGTTGCATGCACTGCAGCTGGACCGCCAGGAGTTCGTCTGTCTCAAGTTCCTCATCCTCTTCAGCCTCGATGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | CTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCCTTTCTGGACTGTGCGCTaGAAGAAGCCCTTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQQWTSCFSGVWRPPPFWTVR*KKPLQL Trigger: GAGCTGCAAGGGCTTCTTCAAGCGCACAGTCCAGAA...AGGAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | AGGATCAGAATTAGATGGGTAGAGGGCGGAAAGGGCTCTTTTTGCCCTACCCACTACATGGGCCCAAACTaGTTCCGGCCACCCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: RIRIRWVEGGKGSFCPTHYMGPN*FRPPRI Trigger: AATGCGGGGTGGCCGGAACAAGTTTGGGCCCATGTA...GTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCATCTAATTCTGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGCTAGTCTGGTACAGGTACTCCTaGGCCTGCATGCTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DATPTLGKRCQEKALMLVWYRYS*ACMLRA Trigger: GGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCA...GACTAGCATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 90 bp | AACAGGGCAGCGTTGGCCTTTTCCTGGGCGTCCTTTACGAGGCTGTaGTTGTTCAGGAATTTCACATCGAGGCTGAAGAGGATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NRAALAFSWASFTRL*LFRNFTSRLKRMRN Trigger: GTTCCTCATCCTCTTCAGCCTCGATGTGAAATTCCTGAACAACCACAGCCTCGTAAAGGACGCCCAGGAAAAGGCCAACGCTGCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCAGAATTAGATGGGTAGAGGGCGGAAAGGGCTCTTTTTGCCCTACCCACTTCTGGACTGTGCGCTaGAAGAAGCCCTTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIRIRWVEGGKGSFCPTHFWTVR*KKPLQL Trigger: GAGCTGCAAGGGCTTCTTCAAGCGCACAGTCCAGAA...GTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCATCTAATTCTGATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATTACATGGGCCCAAACTaGTTCCGGCCACCCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GYRCHPDSWKEMSGESFDYMGPN*FRPPRI Trigger: AATGCGGGGTGGCCGGAACAAGTTTGGGCCCATGTA...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCAGAATTAGATGGGTAGAGGGCGGAAAGGGCTCTTTTTGCCCTACCCACTCCAGCTTGAAGCCATaGGCCCGAATCTGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIRIRWVEGGKGSFCPTHSSLKP*ARICAF Trigger: GAAAGCACAGATTCGGGCCAATGGCTTCAAGCTGGA...GTGGGTAGGGCAAAAAGAGCCCTTTCCGCCCTCTACCCATCTAATTCTGATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAAAATTTATTTCAGGGCTGCAGGGCTGCAGGGGTTTATAAGGGCACTTCTGGTCCGGTCTCCAGCTaGAAGCCATTGGCCCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LQNLFQGCRAAGVYKGTSGPVSS*KPLARI Trigger: GATTCGGGCCAATGGCTTCAAGCTGGAGACCGGACC...AGAAGTGCCCTTATAAACCCCTGCAGCCCTGCAGCCCTGAAATAAATTTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCTTGCGGGGCATCTCGTaGCCCAAATGCTTGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SKLSLQQWTSCFSGVWRPLRGIS*PKCLWY Trigger: GTACCACAAGCATTTGGGCAACGAGATGCCCCGCAA...GGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | GGGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATTCAATGAGAAGGTTGTaGCGGGGCATCTCGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GYRCHPDSWKEMSGESFDSMRRL*RGISLP Trigger: GGGCAACGAGATGCCCCGCAACAACCTTCTCATTGA...ATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAGTTTACAACAGTGGACTTCCTGCTTCAGTGGAGTCTGGAGACCCCCTCATCTCAATGAGAAGGTaGTTGCGGGGCATCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSVYNSGLPASVESGDPLISMRR*LRGISL Trigger: CAACGAGATGCCCCGCAACAACCTTCTCATTGAGAT...GAGGGGGTCTCCAGACTCCACTGAAGCAGGAAGTCCACTGTTGTAAACTGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS-3UTR CAA 90 bp | GGTACAGATGCCACCCCGACTCTTGGAAAGAGATGTCAGGAGAAAGCTTTGATGTCGTTGCCCAAATGCTaGTGGTACAGGTACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTDATPTLGKRCQEKALMSLPKC*WYRYSL Trigger: CAAGGAGTACCTGTACCACAAGCATTTGGGCAACGA...CATCAAAGCTTTCTCCTGACATCTCTTTCCAAGAGTCGGGGTGGCATCTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CAA 72 bp | CCCAGCGGCCCACTGGGTGGGCCAGAGACCAGGGCCTaGGGCTCCGGTGCGTGCAGGCTAGGGGGTAACATG | + |
|
Preference number: 6 (lower is better) Translates to: PSGPLGGPETRA*GSGACRLGGNM Trigger: CATGTTACCCCCTAGCCTGCACGCACCGGAGCCCAAGGCCCTGGTCTCTGGCCCACCCAGTGGGCCGCTGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS GCA 72 bp | GGCGCTGGCTGGTCAGAGCGGCTTTTGGCTGGCTCCTaGAGACAGCCCACGATGCGAGCGCGCACCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GAGWSERLLAGS*RQPTMRARTWS Trigger: GGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACCAGCCAGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 72 bp | AGATGGGGCTCCAAAGTCACCCAGCGGCCCACTGGGTaGGCCAGAGACCAGGGCCTTGGGCTCCGGTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RWGSKVTQRPTG*ARDQGLGLRCV Trigger: CACGCACCGGAGCCCAAGGCCCTGGTCTCTGGCCCACCCAGTGGGCCGCTGGGTGACTTTGGAGCCCCATCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
||
| CDS CCA 72 bp | GCTGAAGGGCGCTGGCTGGTCAGAGCGGCTTTTGGCTaGCTCCTGCAGACAGCCCACGATGCGAGCGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: AEGRWLVRAAFG*LLQTAHDASAH Trigger: GTGCGCGCTCGCATCGTGGGCTGTCTGCAGGAGCCAGCCAAAAGCCGCTCTGACCAGCCAGCGCCCTTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 72 bp | GGCTCCTGCAGACAGCCCACGATGCGAGCGCGCACCTaGTCCTCCTCTGGCTCTAGTTGCAGCAGCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GSCRQPTMRART*SSSGSSCSSCN Trigger: ATTGCAGCTGCTGCAACTAGAGCCAGAGGAGGACCAGGTGCGCGCTCGCATCGTGGGCTGTCTGCAGGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 72 bp | GGCGGGGGCACCCCCATCGGTGGTCCGGTCTCCAGCTaGAAGCCATTGGCCCGAATCTGTGCTTTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GGGTPIGGPVSS*KPLARICAFFC Trigger: GCAGAAGAAAGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGACCACCGATGGGGGTGCCCCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 90 bp | GGCGGGGGCACCCCCATCGGTGGTCCGGTCTCCAGCTTGAAGCCATaGGCCCGAATCTGTGCTTTCTTCTGCTGCTTCAAGGCCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GGGTPIGGPVSSLKP*ARICAFFCCFKARS Trigger: AGACCGGGCCTTGAAGCAGCAGAAGAAAGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGACCACCGATGGGGGTGCCCCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS TCA 72 bp | GCGGGGGCACCCCCATCGGTGGTCCGGTCTCCAGCTTaGAGCCATTGGCCCGAATCTGTGCTTTCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGAPPSVVRSPA*SHWPESVLSSA Trigger: AGCAGAAGAAAGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGACCACCGATGGGGGTGCCCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 72 bp | TCCAGCTGCAGTGCATGCAACTGGAGCACTAACTCTTaGGCCCGCAGCACCAGGCTGTGCAGCAGGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSCSACNWSTNS*ARSTRLCSREP Trigger: TGGCTCCCTGCTGCACAGCCTGGTGCTGCGGGCCCAAGAGTTAGTGCTCCAGTTGCATGCACTGCAGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 72 bp | ACGAACTCCTGGCGGTCCAGCTGCAGTGCATGCAACTaGAGCACTAACTCTTGGGCCCGCAGCACCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TNSWRSSCSACN*STNSWARSTRL Trigger: CAGCCTGGTGCTGCGGGCCCAAGAGTTAGTGCTCCAGTTGCATGCACTGCAGCTGGACCGCCAGGAGTTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CCA 72 bp | TCTCGTTGCCCAAATGCTTGTGGTACAGGTACTCCTTaGCCTGCATGCTCAGGGCCCGCACCTCCACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SRCPNACGTGTP*PACSGPAPPPG Trigger: GCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 90 bp | TTGCGGGGCATCTCGTTGCCCAAATGCTTGTGGTACAGGTACTCCTaGGCCTGCATGCTCAGGGCCCGCACCTCCACCAGGCACAATAGC | + |
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Preference number: 6 (lower is better) Translates to: LRGISLPKCLWYRYS*ACMLRARTSTRHNS Trigger: GCTATTGTGCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGATGCCCCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 72 bp | ATCTCGTTGCCCAAATGCTTGTGGTACAGGTACTCCTaGGCCTGCATGCTCAGGGCCCGCACCTCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: ISLPKCLWYRYS*ACMLRARTSTR Trigger: CCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS TCA 72 bp | CAGCTGCAATATGAGCTCTGGTACATTGGGCCCTCCTaGGAAGGGCTCTGGATAGCTGTAGGGTGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLQYELWYIGPS*EGLWIAVGWPW Trigger: CCAGGGCCACCCTACAGCTATCCAGAGCCCTTCTCAGGAGGGCCCAATGTACCAGAGCTCATATTGCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 72 bp | ATGTGGTCCAACACCAGCAGCTCGCTCCAACAGTTCTaGAGCAGTGTCATCTGGTCAGCCACCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: MWSNTSSSLQQF*SSVIWSATSSS Trigger: GGAGCTGGAGGTGGCTGACCAGATGACACTGCTGCAGAACTGTTGGAGCGAGCTGCTGGTGTTGGACCACAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 72 bp | TTGCCCAAATGCTTGTGGTACAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACCTCCACCAGGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LPKCLWYRYSLA*MLRARTSTRHN Trigger: ATTGTGCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS TCA 72 bp | GGTCCTCCTCTGGCTCTAGTTGCAGCAGCTGCAATATaGGCTCTGGTACATTGGGCCCTCCTGAGAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GPPLALVAAAAI*ALVHWALLRRA Trigger: AGCCCTTCTCAGGAGGGCCCAATGTACCAGAGCTCATATTGCAGCTGCTGCAACTAGAGCCAGAGGAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 72 bp | ACCCCCATCGGTGGTCCGGTCTCCAGCTTGAAGCCATaGGCCCGAATCTGTGCTTTCTTCTGCTGCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TPIGGPVSSLKP*ARICAFFCCFK Trigger: CTTGAAGCAGCAGAAGAAAGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGACCACCGATGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 72 bp | TCCGGTCTCCAGCTTGAAGCCATTGGCCCGAATCTGTaGTTTCTTCTGCTGCTTCAAGGCCCGGTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SGLQLEAIGPNL*FLLLLQGPVSL Trigger: AAGAGAGACCGGGCCTTGAAGCAGCAGAAGAAAGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 72 bp | ATGAGAAGGTTGTTGCGGGGCATCTCGTTGCCCAAATaGTTGTGGTACAGGTACTCCTTGGCCTGCATGCTC | + |
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Preference number: 6 (lower is better) Translates to: MRRLLRGISLPK*LWYRYSLACML Trigger: GAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCATTTGGGCAACGAGATGCCCCGCAACAACCTTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 90 bp | AGGGCAGCGTTGGCCTTTTCCTGGGCGTCCTTTACGAGGCTGTGGTaGTTCAGGAATTTCACATCGAGGCTGAAGAGGATGAGGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: RAALAFSWASFTRLW*FRNFTSRLKRMRNL Trigger: CAAGTTCCTCATCCTCTTCAGCCTCGATGTGAAATTCCTGAACAACCACAGCCTCGTAAAGGACGCCCAGGAAAAGGCCAACGCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 72 bp | GCTGCGTCTTGTCGATTTTGCAGCTCTGACTCTCGGTaGACGTGTAATGCTTGTTGTTCTGGACTGTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: AASCRFCSSDSR*TCNACCSGLCA Trigger: AGCGCACAGTCCAGAACAACAAGCATTACACGTGCACCGAGAGTCAGAGCTGCAAAATCGACAAGACGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS GCA 72 bp | AGAAGGGACAGCGCTTACGCTGCGTCTTGTCGATTTTaGAGCTCTGACTCTCGGTGCACGTGTAATGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RRDSAYAASCRF*SSDSRCTCNAC Trigger: ACAAGCATTACACGTGCACCGAGAGTCAGAGCTGCAAAATCGACAAGACGCAGCGTAAGCGCTGTCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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| CDS CAA 90 bp | TGGTTGTTCAGGAATTTCACATCGAGGCTGAAGAGGATGAGGAACTaGAGACAGACGAACTCCTGGCGGTCCAGCTGCAGTGCATGCAAC | + |
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Preference number: 6 (lower is better) Translates to: WLFRNFTSRLKRMRN*RQTNSWRSSCSACN Trigger: GTTGCATGCACTGCAGCTGGACCGCCAGGAGTTCGTCTGTCTCAAGTTCCTCATCCTCTTCAGCCTCGATGTGAAATTCCTGAACAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028084.5 ENSMUST00000112883.8 |
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