Pregenerated sensors for NR4A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028341Ensembl transcript IDs: ENSMUST00000030025.10, ENSMUST00000153369.2
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTCCAGTCAGCGGGAGGAATCACCTGCATTAATGCTTGTCCTCTaGAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: HSSQREESPALMLVL*RASVPSTLGTLGCQ Trigger: TTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAGGACAAGCATTAATGCAGGTGATTCCTCCCGCTGACTGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR TCA 90 bp | AAAGCAATGCTGTTAGAGGAGAAGGGCTTGGGAGACTCGGCCATTTaGAACAAAAGCAAGGCACTCTCCAGGAACAGCAAGTGGATTCCC | + |
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Preference number: 1 (lower is better) Translates to: KAMLLEEKGLGDSAI*NKSKALSRNSKWIP Trigger: GGGAATCCACTTGCTGTTCCTGGAGAGTGCCTTGCTTTTGTTTCAAATGGCCGAGTCTCCCAAGCCCTTCTCCTCTAACAGCATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR TCA 90 bp | AAGAAAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTaGCACAGGAAGTATATCCTAAAGGGATCCGTCGTAGGACACAGC | + |
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Preference number: 1 (lower is better) Translates to: KKREFSASFAPRIYP*HRKYILKGSVVGHS Trigger: GCTGTGTCCTACGACGGATCCCTTTAGGATATACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR GCA 90 bp | CCCTTAACTAAAACGGCTTCATCATTCTTCAAACCAGCAGATAGATaGTTAGACAGTTCTTTCCCTTCAATCTGTGGGTGTGAGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: PLTKTASSFFKPADR*LDSSFPSICGCEDR Trigger: TCTGTCCTCACACCCACAGATTGAAGGGAAAGAACTGTCTAAGCATCTATCTGCTGGTTTGAAGAATGATGAAGCCGTTTTAGTTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR CCA 90 bp | CAGAAGAACACTGGCTGTATAGTCTTTTCTTTCAGCACTAGTGTCTaGCCCTTAACTAAAACGGCTTCATCATTCTTCAAACCAGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: QKNTGCIVFSFSTSV*PLTKTASSFFKPAD Trigger: ATCTGCTGGTTTGAAGAATGATGAAGCCGTTTTAGTTAAGGGCCAGACACTAGTGCTGAAAGAAAAGACTATACAGCCAGTGTTCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGATCCCCCTTCAGGATaGCTGGATAGTCATCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CGCEDRRGNSISQSTVLLDPPSG*LDSHQG Trigger: CCCCTGATGACTATCCAGCCATCCTGAAGGGGGATC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCACAGCCCTACCCTGGTaGACAGCCCTTGGCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFTALPW*TALGCS Trigger: AGAACAGCCAAGGGCTGTTCACCAGGGTAGGGCTGT...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGAACTCTGTCCAGGTTaGCAAAACACAGCGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: CGCEDRRGNSISQSTVLLELCPG*QNTAKT Trigger: TGTCTTCGCTGTGTTTTGTCAACCTGGACAGAGTTC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGTGCTCATTGGGCTTCTaGGTGGATGAATCAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: CGCEDRRGNSISQSTVLLCSLGF*VDESGT Trigger: AGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCA...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGGGTTAACACTTGATTaGGTCAACCAGTGCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: CGCEDRRGNSISQSTVLLGLTLD*VNQCSL Trigger: CAATGAGCACTGGTTGACTCAATCAAGTGTTAACCC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAATTCTCCCCACCCCACTaGTGGGATAGCATCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: ESLRRATPPKGSTGQVDQFSPPH*WDSIIQ Trigger: TTGGATGATGCTATCCCAGCAGTGGGGTGGGGAGAA...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCTGAAGGAAGGACAGTaGGTGTGGAAGGTGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: REWPESLRRATPPKGSTGLKEGQ*VWKVFK Trigger: TTTGAACACCTTCCACACTCACTGTCCTTCCTTCAG...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCGGAACTTGCTACAACTaGAGTAGGTTTAGAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCGTCYN*SRFREL Trigger: GAGTTCTCTAAACCTACTTCAGTTGTAGCAAGTTCC...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCCGGCCAAAGGGATCTTaGCTTGATACAGAGTATATA | + |
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Preference number: 2 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCRPKGS*LDTEYI Trigger: TATATACTCTGTATCAAGTCAAGATCCCTTTGGCCG...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCTTCTCCCCACCCCACTaGTGGGATAGCATCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFFSPPH*WDSIIQ Trigger: TTGGATGATGCTATCCCAGCAGTGGGGTGGGGAGAA...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGATTTTCTGCCTCATTTaGACCACGTATCTACCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CGCEDRRGNSISQSTVLLIFCLI*TTYLPL Trigger: CAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAAT...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGTTGCAATACTCAAGGTaGACAAGAAGGTTACGTACG | + |
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Preference number: 2 (lower is better) Translates to: CGCEDRRGNSISQSTVLLLQYSR*TRRLRT Trigger: CGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAA...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCCCAGAGCACCGTGCTaGTGTTTTGCTTTGCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFPRAPC*CFALPF Trigger: GAAAGGCAAAGCAAAACAGCAGCACGGTGCTCTGGG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCCACGTATCTACCCTTaGCACAGGAAGTATATCCTA | + |
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Preference number: 2 (lower is better) Translates to: REWPESLRRATPPKGSTGPRIYP*HRKYIL Trigger: TAGGATATACTTCCTGTGTCAAGGGTAGATACGTGG...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGGATCCCCCTTCAGGATaGCTGGATAGTCATCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PRSNFAILKVHKKVTYAQDPPSG*LDSHQG Trigger: CCCCTGATGACTATCCAGCCATCCTGAAGGGGGATC...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCTGAAGGAAGGACAGTaGGTGTGGAAGGTGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFLKEGQ*VWKVFK Trigger: TTTGAACACCTTCCACACTCACTGTCCTTCCTTCAG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGGAGCTGCTTTTCCCCTaGAGGAAGGACAGTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: PRSNFAILKVHKKVTYAQELLFP*RKDSEC Trigger: ACACTCACTGTCCTTCCTTCAGGGGAAAAGCAGCTC...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCTGCTCATTGGGCTTCTaGGTGGATGAATCAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFCSLGF*VDESGT Trigger: AGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCA...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR CAA 90 bp | AAAAGCAATGCTGTTAGAGGAGAAGGGCTTGGGAGACTCGGCCATTaGAAACAAAAGCAAGGCACTCTCCAGGAACAGCAAGTGGATTCC | + |
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Preference number: 2 (lower is better) Translates to: KSNAVRGEGLGRLGH*KQKQGTLQEQQVDS Trigger: GGAATCCACTTGCTGTTCCTGGAGAGTGCCTTGCTTTTGTTTCAAATGGCCGAGTCTCCCAAGCCCTTCTCCTCTAACAGCATTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCCACGTATCTACCCTTaGCACAGGAAGTATATCCTA | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFPRIYP*HRKYIL Trigger: TAGGATATACTTCCTGTGTCAAGGGTAGATACGTGG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGGAAAAGGGAATTTTCTaGCTCATTTGCACCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: REWPESLRRATPPKGSTGEKGIF*LICTTY Trigger: ATACGTGGTGCAAATGAGGCAGAAAATTCCCTTTTC...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGCTGGTGAACAGCCCTTaGCTGTTCTTATTTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: WPESLRRATPPKGSTGQVLVNSP*LFLFLN Trigger: ATTTAAAAATAAGAACAGCCAAGGGCTGTTCACCAG...CACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTGAGCTGCTTTTCCCCTaGAGGAAGGACAGTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSELLFP*RKDSEC Trigger: ACACTCACTGTCCTTCCTTCAGGGGAAAAGCAGCTC...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACACCCAACACGATACTCTaGAAGGTTTCTGGCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: ESTSAHWASEWMNQELATPNTIL*KVSGFR Trigger: CCTAAAGCCAGAAACCTTGCAGAGTATCGTGTTGGG...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCATTTTCTGCCTCATTTaGACCACGTATCTACCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFIFCLI*TTYLPL Trigger: CAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAAT...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCTTGCAATACTCAAGGTaGACAAGAAGGTTACGTACG | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFLQYSR*TRRLRT Trigger: CGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAA...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTCAGCCTCCAGGAGCTaGTGGTCTTGCAATAAATAC | + |
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Preference number: 2 (lower is better) Translates to: PRSNFAILKVHKKVTYAQSASRS*WSCNKY Trigger: GTATTTATTGCAAGACCACCAGCTCCTGGAGGCTGA...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGAGATGCAGTAAGATGTaGGGGAGACTAAGGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PRSNFAILKVHKKVTYAQRCSKM*GRLREG Trigger: ACCTTCCCTTAGTCTCCCCCACATCTTACTGCATCT...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAATCAAACCCATTCTTTTaGTCACTTAATGATCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ESLRRATPPKGSTGQVDQSNPFF*SLNDQV Trigger: CACCTGATCATTAAGTGAGCAAAAGAATGGGTTTGA...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGAGTGCTAAACAGTGCTaGCTTAAAGGTCACTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PRSNFAILKVHKKVTYAQSAKQC*LKGHCK Trigger: CTTGCAGTGACCTTTAAGGCAGCACTGTTTAGCACT...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCTATCCTTATCATCTCTaGTGTTTACCCTGTATGACC | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFYPYHL*CLPCMT Trigger: GGTCATACAGGGTAAACACCAGAGATGATAAGGATA...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR CAA 90 bp | GAAGAAAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTaGACACAGGAAGTATATCCTAAAGGGATCCGTCGTAGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: EEKGIFCLICTTYLP*TQEVYPKGIRRRTQ Trigger: CTGTGTCCTACGACGGATCCCTTTAGGATATACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACACGCCATTTCATAGCATaGCTGCCTCCTTCTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: ESTSAHWASEWMNQELATRHFIA*LPPSYF Trigger: AAAATAAGAAGGAGGCAGTCATGCTATGAAATGGCG...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCTGGTGAACAGCCCTTaGCTGTTCTTATTTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LCRASVPSTLGTLGCQHFLVNSP*LFLFLN Trigger: ATTTAAAAATAAGAACAGCCAAGGGCTGTTCACCAG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGACACGAACACCCCATTTaGTTACTCTGTATCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PSLKFKNLNISSPVTLIGHEHPI*LLCISA Trigger: GGCTGAGATACAGAGTAATCAAATGGGGTGTTCGTG...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGACCCAACACGATACTCTaGAAGGTTTCTGGCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PSLKFKNLNISSPVTLIGPNTIL*KVSGFR Trigger: CCTAAAGCCAGAAACCTTGCAGAGTATCGTGTTGGG...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR TCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCGAACTCTGTCCAGGTTaGCAAAACACAGCGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFELCPG*QNTAKT Trigger: TGTCTTCGCTGTGTTTTGTCAACCTGGACAGAGTTC...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGTCAAACCCATTCTTTTaGTCACTTAATGATCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLSNPFF*SLNDQV Trigger: CACCTGATCATTAAGTGAGCAAAAGAATGGGTTTGA...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGACAAAGTGCTAAACAGTaGTGCCTTAAAGGTCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: PSLKFKNLNISSPVTLIGQSAKQ*CLKGHC Trigger: GCAGTGACCTTTAAGGCAGCACTGTTTAGCACTTTG...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR CAA 90 bp | GCATCAACAGTAGAAACATATAAAAGGGGGCACAAACACGGAATTTaGAACCGCAACCCACTAACCTTCTCTAGAACTCACGTTAATACT | + |
|
Preference number: 2 (lower is better) Translates to: ASTVETYKRGHKHGI*NRNPLTFSRTHVNT Trigger: AGTATTAACGTGAGTTCTAGAGAAGGTTAGTGGGTTGCGGTTCAAAATTCCGTGTTTGTGCCCCCTTTTATATGTTTCTACTGTTGATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACAGGAACTTGCTACAACTaGAGTAGGTTTAGAGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTGTCYN*SRFREL Trigger: GAGTTCTCTAAACCTACTTCAGTTGTAGCAAGTTCC...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGACGGCCAAAGGGATCTTaGCTTGATACAGAGTATATA | + |
|
Preference number: 2 (lower is better) Translates to: PSLKFKNLNISSPVTLIGRPKGS*LDTEYI Trigger: TATATACTCTGTATCAAGTCAAGATCCCTTTGGCCG...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCAGTGCTAAACAGTGCTaGCTTAAAGGTCACTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFSAKQC*LKGHCK Trigger: CTTGCAGTGACCTTTAAGGCAGCACTGTTTAGCACT...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR TCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCCGCCATTTCATAGCATaGCTGCCTCCTTCTTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFRHFIA*LPPSYF Trigger: AAAATAAGAAGGAGGCAGTCATGCTATGAAATGGCG...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTAGCATCATCCAAAAGTaGTTTGTCAGCAATTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSSIIQK*FVSNFL Trigger: TAAGAAATTGCTGACAAAGCACTTTTGGATGATGCT...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATGCGAAGACAGTTGTATaGAATCCACTTTATAACCCG | + |
|
Preference number: 2 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYAKTVV*NPLYNP Trigger: CGGGTTATAAAGTGGATTGCATACAACTGTCTTCGC...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATGAAAAGGGAATTTTCTaGCTCATTTGCACCACGTAT | + |
|
Preference number: 2 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYEKGIF*LICTTY Trigger: ATACGTGGTGCAAATGAGGCAGAAAATTCCCTTTTC...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR TCA 72 bp | GTGGATTCCCATTTCCTGCTGAGGGCGGGTTCACACTaGGACTGCACTCCAGTCAGCGGGAGGAATCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: VDSHFLLRAGSH*DCTPVSGRNHL Trigger: CAGGTGATTCCTCCCGCTGACTGGAGTGCAGTCTCAGTGTGAACCCGCCCTCAGCAGGAAATGGGAATCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGAACCAAGGAGCAACTTaGCAATACTCAAGGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: CGCEDRRGNSISQSTVLLNQGAT*QYSRCT Trigger: TGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGGTT...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCACCGTGCTGCTGTTTaGCTTTGCCTTTCAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LCRASVPSTLGTLGCQHFHRAAV*LCLSDR Trigger: CCTGTCTGAAAGGCAAAGCAAAACAGCAGCACGGTG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR TCA 72 bp | CTGTTAGAGGAGAAGGGCTTGGGAGACTCGGCCATTTaGAACAAAAGCAAGGCACTCTCCAGGAACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLEEKGLGDSAI*NKSKALSRNSK Trigger: CTTGCTGTTCCTGGAGAGTGCCTTGCTTTTGTTTCAAATGGCCGAGTCTCCCAAGCCCTTCTCCTCTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCTGCTGCTGTTTTGCTTaGCCTTTCAGACAGGACGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCRASVPSTLGTLGCQHFCCCFA*PFRQDE Trigger: TTCGTCCTGTCTGAAAGGCAAAGCAAAACAGCAGCA...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR TCA 72 bp | ATGCTTAGACAGTTCTTTCCCTTCAATCTGTGGGTGTaGGGACAGAAGGGGGAACAGCATTTCCCAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MLRQFFPFNLWV*GQKGEQHFPEH Trigger: GTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGATTGAAGGGAAAGAACTGTCTAAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR GCA 72 bp | GGGAACAGCATTTCCCAGAGCACCGTGCTGCTGTTTTaGTTTGCCTTTCAGACAGGACGAAAAGAAACAACA | + |
|
Preference number: 3 (lower is better) Translates to: GNSISQSTVLLF*FAFQTGRKETT Trigger: TGTTGTTTCTTTTCGTCCTGTCTGAAAGGCAAAGCAAAACAGCAGCACGGTGCTCTGGGAAATGCTGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCCTGGTGAACAGCCCTaGGCTGTTCTTATTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCRASVPSTLGTLGCQHFPGEQP*AVLIFK Trigger: TTTAAAAATAAGAACAGCCAAGGGCTGTTCACCAGG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGAATTTTCTGCCTCATTaGCACCACGTATCTACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRSNFAILKVHKKVTYAQNFLPH*HHVSTL Trigger: AAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATT...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR GCA 72 bp | GACAGTGAGTGTGGAAGGTGTTCAAACCCATTCTTTTaGTCACTTAATGATCAGGTGCCAGCAGAGCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: DSECGRCSNPFF*SLNDQVPAEQV Trigger: TACTTGCTCTGCTGGCACCTGATCATTAAGTGAGCAAAAGAATGGGTTTGAACACCTTCCACACTCACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR CCA 72 bp | TTGATTGAGTCAACCAGTGCTCATTGGGCTTCTGAGTaGATGAATCAGGAACTTGCTACAACTGAAGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LIESTSAHWASE*MNQELATTEVG Trigger: ACCTACTTCAGTTGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTCAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTCCTGGTGAACAGCCCTaGGCTGTTCTTATTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSPGEQP*AVLIFK Trigger: TTTAAAAATAAGAACAGCCAAGGGCTGTTCACCAGG...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACAAGAACTCTGTCCAGGTaGACAAAACACAGCGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTRTLSR*TKHSED Trigger: GTCTTCGCTGTGTTTTGTCAACCTGGACAGAGTTCT...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCAATTTTCTGCCTCATTaGCACCACGTATCTACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFNFLPH*HHVSTL Trigger: AAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATT...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCCCAGTTCCTACTTATTaGCTTGTTCTCCTAGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFPVPTY*LVLLGL Trigger: TAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGG...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGATATCTGGGTTACACTTaGCAGCAATTAGGCAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLKFKNLNISSPVTLIGYLGYT*QQLGNS Trigger: TGAATTGCCTAATTGCTGCAAAGTGTAACCCAGATA...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR TCA 72 bp | ATATATATCCTTATCATCTCTGGTGTTTACCCTGTATaGCCCAGTTCCTACTTATTTGCTTGTTCTCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: IYILIISGVYPV*PSSYLFACSPR Trigger: CCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAACACCAGAGATGATAAGGATATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR TCA 72 bp | CTTAACATCTCAAGCCCTGTCACCTTGATAGGAAGGTaGTATAGTTCATACAATCTTTATACAAACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LNISSPVTLIGR*YSSYNLYTNKT Trigger: TGTTTTGTTTGTATAAAGATTGTATGAACTATATCACCTTCCTATCAAGGTGACAGGGCTTGAGATGTTAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR GCA 72 bp | CTTTATTCAAGGCTGTCTGCTGGTAAAGTGTTAGTATaGGTGACTATGTTTAAAAGTTTATTTTCCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LYSRLSAGKVLV*VTMFKSLFSYR Trigger: TCTGTAGGAAAATAAACTTTTAAACATAGTCACGCATACTAACACTTTACCAGCAGACAGCCTTGAATAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGCGCAGCAGCTTGGCTaGCTGCTGCGGCCGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLAQQLG*LLRPRL Trigger: GAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCGGTGGGGGAGGCTGTaGGGCCCAGCGGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: REWPESLRRATPPKGSTGRWGRL*GPAEGR Trigger: CCTTCCCTCCGCTGGGCCTCACAGCCTCCCCCACCG...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGAGCAGCTTGGCTGCCTaGTGCGGCCGCGGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WPESLRRATPPKGSTGQVSSLAA*CGRGSQ Trigger: CTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCT...CACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCGCGTGGCCGTCCTCTTaGCCAGCGGGAGCCCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCAWPSS*PAGARM Trigger: CATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGC...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGAGCAGCTTGGCTGCCTaGTGCGGCCGCGGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REWPESLRRATPPKGSTGSSLAA*CGRGSQ Trigger: CTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCT...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGTGCAGCTGCGGCCGTaGGGTCATAGCCGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLVQLRP*GHSRGG Trigger: ACCACCTCGGCTATGACCCCACGGCCGCAGCTGCAC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGAGGGAAGGTCAGCGTaGCCGTCCTCTTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLEGRSA*PSSWPA Trigger: CGCTGGCCAAGAGGACGGCCACGCTGACCTTCCCTC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCACAGGCAGGAGGGCTTaGGTTCGCAGCTGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCTGRRA*VRSCWG Trigger: ACCCCAGCAGCTGCGAACTCAAGCCCTCCTGCCTGT...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCGGTGGGGGAGGCTGTaGGGCCCAGCGGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFRWGRL*GPAEGR Trigger: CCTTCCCTCCGCTGGGCCTCACAGCCTCCCCCACCG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGCAGACTGAGTGCAGCTaGGGCCGTGGGGTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLQTECS*GRGVIA Trigger: GGCTATGACCCCACGGCCGCAGCTGCACTCAGTCTG...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCGCGCAGCAGCTTGGCTaGCTGCTGCGGCCGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFAQQLG*LLRPRL Trigger: GAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGC...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAAGCGTGGCCGTCCTCTTaGCCAGCGGGAGCCCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRRATPPKGSTGQVDQAWPSS*PAGARM Trigger: CATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGC...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGTGCCTGCAGTGGCCTaGTCGGTGGGACAGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLVPAVA*SVGQYL Trigger: CAGATACTGTCCCACCGACCAGGCCACTGCAGGCAC...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCAGTACATGGAGGTGCTaGGCAGTACCTCGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCSTWRC*AVPRPR Trigger: CCGAGGACGAGGTACTGCCCAGCACCTCCATGTACT...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAAGTGCAGCTGCGGCCGTaGGGTCATAGCCGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESLRRATPPKGSTGQVDQVQLRP*GHSRGG Trigger: ACCACCTCGGCTATGACCCCACGGCCGCAGCTGCAC...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGCTACCGAGGTCCATaGTCAGCTTGGTGTAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCCYRGP*SAWCSR Trigger: CCGACTACACCAAGCTGACCATGGACCTCGGTAGCA...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCGGAGGGAGGAGGAATaGACGGCTGCTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: REWPESLRRATPPKGSTGRREEE*TAAVAG Trigger: ACCAGCAACAGCAGCCGTCCATTCCTCCTCCCTCCG...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCACAGGCAGGAGGGCTTaGGTTCGCAGCTGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFTGRRA*VRSCWG Trigger: ACCCCAGCAGCTGCGAACTCAAGCCCTCCTGCCTGT...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGATGATGAGCTCCTATTaGGTGGCGATGGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WPESLRRATPPKGSTGQVMMSSY*VAMGGW Trigger: CCAGCCTCCCATCGCCACCCAATAGGAGCTCATCAT...CACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGAATCCTCGAAGGCACTaGAGTCGATGCAGGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLNPRRH*SRCRTS Trigger: ACTTGTCCTGCATCGACTTCAGTGCCTTCGAGGATT...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGTCTCTCCCAGCAGGCTaGACGCGGTGGGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLSLPAG*TRWGRL Trigger: CAGCCTCCCCCACCGCGTCCAGCCTGCTGGGAGAGA...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGTAGTCGGGGTTCATaGTTTCTGTGGTGTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCCSRGS*FLWCIP Trigger: CGGAATACACCACAGAAATCATGAACCCCGACTACA...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGCCTTTAAGCTGCTTGTaGTCTTGGTGCATAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLPLSCL*SWCIAP Trigger: AGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGG...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGCGTGCTCAGCATCTGTaGCTGCAGTGGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSNFAILKVHKKVTYAQRAQHL*LQWPGR Trigger: CCGACCAGGCCACTGCAGGCACAGATGCTGAGCACG...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGATGCGCTGGAGGCCCTaGGTACAGATCTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: REWPESLRRATPPKGSTGMRWRP*VQIFLS Trigger: ACTGAGAAAGATCTGTACCCAGGGCCTCCAGCGCAT...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGGGAGGAATGGACGGCTaGTGTTGCTGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSNFAILKVHKKVTYAQGGMDG*CCWWWW Trigger: CCACCACCACCAGCAACAGCAGCCGTCCATTCCTCC...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACAGGAGGAATGGACGGCTaGTGTTGCTGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESTSAHWASEWMNQELATGGMDG*CCWWWW Trigger: CCACCACCACCAGCAACAGCAGCCGTCCATTCCTCC...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGGATGGCGGGGAGGGCTaGGAGGGCTCCTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLDGGEG*EGSCCS Trigger: ACTACAACAGGAGCCCTCGCAGCCCTCCCCGCCATC...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAATCCTGGGATCTTTTCTaGCCAGCTTCTGGACACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLRRATPPKGSTGQVDQSWDLF*PASGHV Trigger: GACGTGTCCAGAAGCTGGGCAGAAAAGATCCCAGGA...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACACATCTGTGCCTGCAGTaGCCTGGTCGGTGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESTSAHWASEWMNQELATHLCLQ*PGRWDS Trigger: ACTGTCCCACCGACCAGGCCACTGCAGGCACAGATG...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTCGTGCTCAGCATCTGTaGCTGCAGTGGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSRAQHL*LQWPGR Trigger: CCGACCAGGCCACTGCAGGCACAGATGCTGAGCACG...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCTCCTGGGATCTTTTCTaGCCAGCTTCTGGACACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFSWDLF*PASGHV Trigger: GACGTGTCCAGAAGCTGGGCAGAAAAGATCCCAGGA...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACATCTCTCCCAGCAGGCTaGACGCGGTGGGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTSLPAG*TRWGRL Trigger: CAGCCTCCCCCACCGCGTCCAGCCTGCTGGGAGAGA...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGGAGATCAGTGAATCCTaGGATCTTTTCTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: REWPESLRRATPPKGSTGEISES*DLFCPA Trigger: AGCTGGGCAGAAAAGATCCCAGGATTCACTGATCTC...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAATGTAGTCGGGGTTCATaGTTTCTGTGGTGTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRRATPPKGSTGQVDQCSRGS*FLWCIP Trigger: CGGAATACACCACAGAAATCATGAACCCCGACTACA...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACAAAGGCGGAGACTGCTTaGAGTACATGGAGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESTSAHWASEWMNQELATKAETA*STWRCW Trigger: CCAGCACCTCCATGTACTTCAAGCAGTCTCCGCCTT...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTCTGCACCGTTCTCTTaGAGAAGCCCTTGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRSNFAILKVHKKVTYAQSAPFS*RSPCSP Trigger: AGGGCTGCAAGGGCTTCTTCAAGAGAACGGTGCAGA...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGTCTATAAGTAACGTCTaGTCTTCTTTGGGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCEDRRGNSISQSTVLLSISNV*SSLGRS Trigger: TGATCTCCCCAAAGAAGATCAGACGTTACTTATAGA...CAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCGTAGAAGGCGGAGACTaGTTGAAGTACATGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFVEGGD*LKYMEV Trigger: CACCTCCATGTACTTCAAGCAGTCTCCGCCTTCTAC...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACATGCTACCGAGGTCCATaGTCAGCTTGGTGTAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESTSAHWASEWMNQELATCYRGP*SAWCSR Trigger: CCGACTACACCAAGCTGACCATGGACCTCGGTAGCA...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGAGAGGGAAGGTCAGCGTaGCCGTCCTCTTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSLKFKNLNISSPVTLIGEGRSA*PSSWPA Trigger: CGCTGGCCAAGAGGACGGCCACGCTGACCTTCCCTC...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACAATGATGAGCTCCTATTaGGTGGCGATGGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESTSAHWASEWMNQELATMMSSY*VAMGGW Trigger: CCAGCCTCCCATCGCCACCCAATAGGAGCTCATCAT...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFRQAKA*ISRFRL Trigger: GAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCT...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR CAA 72 bp | GCTGTTAGAGGAGAAGGGCTTGGGAGACTCGGCCATTaGAAACAAAAGCAAGGCACTCTCCAGGAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVRGEGLGRLGH*KQKQGTLQEQQ Trigger: TTGCTGTTCCTGGAGAGTGCCTTGCTTTTGTTTCAAATGGCCGAGTCTCCCAAGCCCTTCTCCTCTAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGAGCTAGTGTGCCTTCCACTCTGGGTACACTTGGGTGTCAACATTTCCCTTTAAGCTGCTTGTaGTCTTGGTGCATAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCRASVPSTLGTLGCQHFPLSCL*SWCIAP Trigger: AGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGG...GAAATGTTGACACCCAAGTGTACCCAGAGTGGAAGGCACACTAGCTCTGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCGGTACCGCCTTCATCTaGGGGTCCAGCAGCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFGTAFI*GSSSGP Trigger: GGGACCGCTGCTGGACCCGCAGATGAAGGCGGTACC...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGGGCAGTTTTTATTTaGCAGGCAAACATATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCWAVFI*QANIFC Trigger: GCAAAATATGTTTGCCTGGCAAATAAAAACTGCCCA...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAACGGTGGGACAGTATCTaGAATAATCAAGATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRRATPPKGSTGQVDQRWDSI*NNQDLW Trigger: CCAGAGATCTTGATTATTCCAGATACTGTCCCACCG...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGTTTCTGCCCAGCTTCTaGACACGTCAATGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLFLPSF*TRQWRP Trigger: CGGCCTCCATTGACGTGTCCAGAAGCTGGGCAGAAA...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGGCCTGTCCCTTCCTCTaGTGGTCCTTTAAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSNFAILKVHKKVTYAQACPFL*WSFKLL Trigger: AAGCAGCTTAAAGGACCACCAGAGGAAGGGACAGGC...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR CAA 72 bp | GGGGAACAGCATTTCCCAGAGCACCGTGCTGCTGTTTaGCTTTGCCTTTCAGACAGGACGAAAAGAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GEQHFPEHRAAV*LCLSDRTKRNN Trigger: GTTGTTTCTTTTCGTCCTGTCTGAAAGGCAAAGCAAAACAGCAGCACGGTGCTCTGGGAAATGCTGTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCCAGACTGAGTGCAGCTaGGGCCGTGGGGTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFQTECS*GRGVIA Trigger: GGCTATGACCCCACGGCCGCAGCTGCACTCAGTCTG...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCGATGGCGGGGAGGGCTaGGAGGGCTCCTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFDGGEG*EGSCCS Trigger: ACTACAACAGGAGCCCTCGCAGCCCTCCCCGCCATC...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGACATCTGTGCCTGCAGTaGCCTGGTCGGTGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLKFKNLNISSPVTLIGHLCLQ*PGRWDS Trigger: ACTGTCCCACCGACCAGGCCACTGCAGGCACAGATG...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR CAA 72 bp | CTAATTGGTGTATCCAAGTCACCACGAACACCCCATTaGATTACTCTGTATCTCAGCCTCCAGGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIGVSKSPRTPH*ITLYLSLQELV Trigger: CACCAGCTCCTGGAGGCTGAGATACAGAGTAATCAAATGGGGTGTTCGTGGTGACTTGGATACACCAATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACAGACCCTCTTCCATCTTaGTCAAAGGCCGAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTDPLPS*SKAEAQ Trigger: CTGGGCCTCGGCCTTTGATCAAGATGGAAGAGGGTC...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGGATGAGATCTTGACGTaGAAAAAGGTGCTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLDEILT*KKVLRA Trigger: GGCCCTCAGCACCTTTTTTCACGTCAAGATCTCATC...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGCAAACATATTTTaGATTTTTCTGCACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: REWPESLRRATPPKGSTGQANIF*IFLHRS Trigger: AGAACGGTGCAGAAAAATGCAAAATATGTTTGCCTG...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAAGCAGGACAAGTCCATTaGAGAACACAAACTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESLRRATPPKGSTGQVDQAGQVH*RTQTYL Trigger: AAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGC...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCCGGAGGGAGGAGGAATaGACGGCTGCTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFRREEE*TAAVAG Trigger: ACCAGCAACAGCAGCCGTCCATTCCTCCTCCCTCCG...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATGTGCCTGCAGTGGCCTaGTCGGTGGGACAGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYVPAVA*SVGQYL Trigger: CAGATACTGTCCCACCGACCAGGCCACTGCAGGCAC...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTGCCTGTCCCTTCCTCTaGTGGTCCTTTAAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSACPFL*WSFKLL Trigger: AAGCAGCTTAAAGGACCACCAGAGGAAGGGACAGGC...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR TCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTACCCATGTCGCTCTGTaGTCATACTCAGTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSTHVAL*SYSVLT Trigger: TGTCAGCACTGAGTATGATCACAGAGCGACATGGGT...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTGTAGAAGGCGGAGACTaGTTGAAGTACATGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSVEGGD*LKYMEV Trigger: CACCTCCATGTACTTCAAGCAGTCTCCGCCTTCTAC...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGAGGGCTATACTGGGCTTaGACGCAGGGCATATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSLKFKNLNISSPVTLIGGLYWA*TQGIST Trigger: TGTGGATATGCCCTGCGTGCAAGCCCAGTATAGCCC...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGATTTCTGCCCAGCTTCTaGACACGTCAATGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSLKFKNLNISSPVTLIGFLPSF*TRQWRP Trigger: CGGCCTCCATTGACGTGTCCAGAAGCTGGGCAGAAA...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCTGCACCGTTCTCTTaGAGAAGCCCTTGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYSAPFS*RSPCSP Trigger: AGGGCTGCAAGGGCTTCTTCAAGAGAACGGTGCAGA...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTCTTTGGGGAGATCAGTaGATCCTGGGATCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSLWGDQ*ILGSFL Trigger: CAGAAAAGATCCCAGGATTCACTGATCTCCCCAAAG...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTGAGATCAGTGAATCCTaGGATCTTTTCTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSEISES*DLFCPA Trigger: AGCTGGGCAGAAAAGATCCCAGGATTCACTGATCTC...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCGGTGAAGGGCTATACTaGGCTTGCACGCAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFGEGLY*ACTQGI Trigger: TATGCCCTGCGTGCAAGCCCAGTATAGCCCTTCACC...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
||
| 3UTR CAA 72 bp | GGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTaGACACAGGAAGTATATCCTAAAGGGATCCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GIFCLICTTYLP*TQEVYPKGIRR Trigger: ACGACGGATCCCTTTAGGATATACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| 3UTR CAA 72 bp | AACTCTGTCCAGGTTGACAAAACACAGCGAAGACAGTaGTATGCAATCCACTTTATAACCCGATCCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSVQVDKTQRRQ*YAIHFITRSPF Trigger: GAAGGGGGATCGGGTTATAAAGTGGATTGCATACAACTGTCTTCGCTGTGTTTTGTCAACCTGGACAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACAACCCATGTCGCTCTGTaGTCATACTCAGTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTTHVAL*SYSVLT Trigger: TGTCAGCACTGAGTATGATCACAGAGCGACATGGGT...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCATGCGCTGGAGGCCCTaGGTACAGATCTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFMRWRP*VQIFLS Trigger: ACTGAGAAAGATCTGTACCCAGGGCCTCCAGCGCAT...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR CAA 72 bp | ACAGCATTTCCCAGAGCACCGTGCTGCTGTTTTGCTTaGCCTTTCAGACAGGACGAAAAGAAACAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAFPRAPCCCFA*PFRQDEKKQQK Trigger: TTTTTGTTGTTTCTTTTCGTCCTGTCTGAAAGGCAAAGCAAAACAGCAGCACGGTGCTCTGGGAAATGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATAATCCTCGAAGGCACTaGAGTCGATGCAGGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYNPRRH*SRCRTS Trigger: ACTTGTCCTGCATCGACTTCAGTGCCTTCGAGGATT...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTCAAGGTTCAGGCTCTaGAAGTTTAAAGAAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRSNFAILKVHKKVTYAQSRFRL*KFKEKS Trigger: AGACTTTTCTTTAAACTTGCAGAGCCTGAACCTTGA...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYRQAKA*ISRFRL Trigger: GAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCT...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR CAA 72 bp | GTAGAAACATATAAAAGGGGGCACAAACACGGAATTTaGAACCGCAACCCACTAACCTTCTCTAGAACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VETYKRGHKHGI*NRNPLTFSRTH Trigger: GTGAGTTCTAGAGAAGGTTAGTGGGTTGCGGTTCAAAATTCCGTGTTTGTGCCCCCTTTTATATGTTTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR TCA 90 bp | CAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATTCCTTTGGGGAGATCAGTaGATCCTGGGATCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QYSRCTRRLRTLSTSNLFLWGDQ*ILGSFL Trigger: CAGAAAAGATCCCAGGATTCACTGATCTCCCCAAAG...GAATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGTGGGCAGTTTTTATTTaGCAGGCAAACATATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLWAVFI*QANIFC Trigger: GCAAAATATGTTTGCCTGGCAAATAAAAACTGCCCA...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTGCAGGACAAGTCCATTaGAGAACACAAACTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSAGQVH*RTQTYL Trigger: AAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGC...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CCA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACACGGTGGGACAGTATCTaGAATAATCAAGATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTRWDSI*NNQDLW Trigger: CCAGAGATCTTGATTATTCCAGATACTGTCCCACCG...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR TCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATCCACATTTCCAAAGCTaGTTGAGTCATGCGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYPHFQS*LSHACM Trigger: CATACACGCATGACTCAATCAGCTTTGGAAATGTGG...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATAAGCTGATTGAGTCATaGGTGTATGGGATGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYKLIES*VYGMRS Trigger: AGATCTCATCCCATACACGCATGACTCAATCAGCTT...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | CCAAGTCTGAAGTTCAAAAATCTTAACATCTCAAGCCCTGTCACCTTGATAGGACAGGCAAACATATTTTaGATTTTTCTGCACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLKFKNLNISSPVTLIGQANIF*IFLHRS Trigger: AGAACGGTGCAGAAAAATGCAAAATATGTTTGCCTG...TCCTATCAAGGTGACAGGGCTTGAGATGTTAAGATTTTTGAACTTCAGACTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR GCA 90 bp | TTTACCCTGTATGACCCAGTTCCTACTTATTTGCTTGTTCTCCTAGGGTTAACATCAAGGTTCAGGCTCTaGAAGTTTAAAGAAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLYDPVPTYLLVLLGLTSRFRL*KFKEKS Trigger: AGACTTTTCTTTAAACTTGCAGAGCCTGAACCTTGA...TGTTAACCCTAGGAGAACAAGCAAATAAGTAGGAACTGGGTCATACAGGGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| 3UTR CAA 72 bp | AGAGGAGAGAATATGATTTGTTATCTGGGTTACACTTaGCAGCAATTAGGCAATTCATTTGGCATTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGENMICYLGYT*QQLGNSFGICL Trigger: CAAACAAATGCCAAATGAATTGCCTAATTGCTGCAAAGTGTAACCCAGATAACAAATCATATTCTCTCCTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | GCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAGACTGAGTGCAGCTaGGGCCGTGGGGTCATAGCCGAGGTGGTGGCCGCCGGCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AACCGRGSQGQTECS*GRGVIAEVVAAGWT Trigger: AGTCCAGCCGGCGGCCACCACCTCGGCTATGACCCCACGGCCGCAGCTGCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | AGCTTGGCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAGACTGAGTaGAGCTGCGGCCGTGGGGTCATAGCCGAGGTGGTGGCCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLAACCGRGSQGQTE*SCGRGVIAEVVAAG Trigger: GCCGGCGGCCACCACCTCGGCTATGACCCCACGGCCGCAGCTGCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS TCA 90 bp | CAGCAGCTTGGCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAGACTaGGTGCAGCTGCGGCCGTGGGGTCATAGCCGAGGTGGTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QQLGCLLRPRLPGAD*VQLRPWGHSRGGGR Trigger: GCGGCCACCACCTCGGCTATGACCCCACGGCCGCAGCTGCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | GGGGTACCGCCTTCATCTGCGGGTCCAGCAGCGGTCCCGGAGCGATaGAGCCAGGCGCAGAGGGCAGCTCGTCGTCCCACAGCGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GVPPSSAGPAAVPER*SQAQRAARRPTAPP Trigger: CGGGGGCGCTGTGGGACGACGAGCTGCCCTCTGCGCCTGGCTGCATCGCTCCGGGACCGCTGCTGGACCCGCAGATGAAGGCGGTACCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | GAGCCCGTATGGGTGGCCCTCGAGCGCAGCAGCTTGGCTGCCTGCTaGGGCCGCGGCTCCCAGGGGCAGACTGAGTGCAGCTGCGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: EPVWVALERSSLAAC*GRGSQGQTECSCGR Trigger: ACGGCCGCAGCTGCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 90 bp | TTGGCCAGCGGGAGCCCGTATGGGTGGCCCTCGAGCGCAGCAGCTTaGCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAGACTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LASGSPYGWPSSAAA*LPAAAAAPRGRLSA Trigger: TGCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 90 bp | AAGGTCAGCGTGGCCGTCCTCTTGGCCAGCGGGAGCCCGTATGGGTaGCCCTCGAGCGCAGCAGCTTGGCTGCCTGCTGCGGCCGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVSVAVLLASGSPYG*PSSAAAWLPAAAAA Trigger: AGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGCTGACCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 90 bp | AGGGAAGGTCAGCGTGGCCGTCCTCTTGGCCAGCGGGAGCCCGTATaGGTGGCCCTCGAGCGCAGCAGCTTGGCTGCCTGCTGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: REGQRGRPLGQREPV*VALERSSLAACCGR Trigger: GCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGCTGACCTTCCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | CTCCGTAGTGCTGGCAGGCAGCGTTGTCGCCGCACACGGCACATGTaGCTTCCCCAGATGATGAGCTCCTATTGGGTGGCGATGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSAGRQRCRRTRHM*LPQMMSSYWVAMGG Trigger: GCCTCCCATCGCCACCCAATAGGAGCTCATCATCTGGGGAAGGCACATGTGCCGTGTGCGGCGACAACGCTGCCTGCCAGCACTACGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAACTCGAGCGCAGCAGCTaGGCTGCCTGCTGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ESLRRATPPKGSTGQVDQLERSS*AACCGR Trigger: GCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAG...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS TCA 90 bp | GGTGATGGTGGTGGTGGTAGCCATGCTCGCGACCCTCTTCCATCTTaGTCAAAGGCCGAGGCCCAGAAGGCGGCATTTGGTACAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDGGGGSHARDPLPS*SKAEAQKAAFGTGR Trigger: CCTGCCTGTACCAAATGCCGCCTTCTGGGCCTCGGCCTTTGATCAAGATGGAAGAGGGTCGCGAGCATGGCTACCACCACCACCATCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGTGCTGGCAGGCAGCGTaGTCGCCGCACACGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: REWPESLRRATPPKGSTGCWQAA*SPHTAH Trigger: ATGTGCCGTGTGCGGCGACAACGCTGCCTGCCAGCA...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS CCA 90 bp | CGCAGGACCTTAGGCTCCGAGGGCTCCAGAGCCTGTCCCTTCCTCTaGTGGTCCTTTAAGCTGCTTGTGATCTTGGTGCATAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRTLGSEGSRACPFL*WSFKLLVILVHSSS Trigger: GGAGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGGACCACCAGAGGAAGGGACAGGCTCTGGAGCCCTCGGAGCCTAAGGTCCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAGCAACTTTGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGCTCGAGCGCAGCAGCTaGGCTGCCTGCTGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSNFAILKVHKKVTYAQLERSS*AACCGR Trigger: GCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAG...CTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCAAAGTTGCTCCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS TCA 90 bp | GTATTCCGAGCCATAAGTCTGCGTGGCGTAAGTGGACCCCGGAGGTaGAGGGCTATACTGGGCTTGCACGCAGGGCATATCCACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFRAISLRGVSGPRR*RAILGLHAGHIHIS Trigger: GGAAATGTGGATATGCCCTGCGTGCAAGCCCAGTATAGCCCTTCACCTCCGGGGTCCACTTACGCCACGCAGACTTATGGCTCGGAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGAGTGGGCTCTTTGGTTaGGAAGGCAGACGACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPESLRRATPPKGSTGQVSGLFG*EGRRPL Trigger: GAGAGGTCGTCTGCCTTCCAAACCAAAGAGCCCACT...CACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCGTTGTAGTGGGCTCTTaGGTTTGGAAGGCAGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCVVVGS*VWKADD Trigger: GTCGTCTGCCTTCCAAACCAAAGAGCCCACTACAAC...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACATGCTGGCAGGCAGCGTaGTCGCCGCACACGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: ESTSAHWASEWMNQELATCWQAA*SPHTAH Trigger: ATGTGCCGTGTGCGGCGACAACGCTGCCTGCCAGCA...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGGTGTGAGGACAGAAGGGGGAACAGCATTTCCCAGAGCACCGTGCTGCAAGCTGCTTGTGATCTaGGTGCATAGCTCCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SVGVRTEGGTAFPRAPCCKLLVI*VHSSST Trigger: AGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTT...GCAGCACGGTGCTCTGGGAAATGCTGTTCCCCCTTCTGTCCTCACACCCACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS TCA 90 bp | CCGTGCTACCGAGGTCCATGGTCAGCTTGGTGTAGTCGGGGTTCATaGTTTCTGTGGTGTATTCCGAGCCATAAGTCTGCGTGGCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCYRGPWSAWCSRGS*FLWCIPSHKSAWRK Trigger: CTTACGCCACGCAGACTTATGGCTCGGAATACACCACAGAAATCATGAACCCCGACTACACCAAGCTGACCATGGACCTCGGTAGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | AGGCCGTCAGAAGGTTGTAGAACTGTTGCACGTGCTCAGCATCTGTaGCTGCAGTGGCCTGGTCGGTGGGACAGTATCTGGAATAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: RPSEGCRTVARAQHL*LQWPGRWDSIWNNQ Trigger: TTGATTATTCCAGATACTGTCCCACCGACCAGGCCACTGCAGGCACAGATGCTGAGCACGTGCAACAGTTCTACAACCTTCTGACGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGCAAGATCTCTGGGTGTaGCATCTGTTAAAGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPESLRRATPPKGSTGQVQDLWV*HLLKLG Trigger: TCCGAGCTTTAACAGATGCAACACCCAGAGATCTTG...CACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGAAGCTGCTTGTGATCTaGGTGCATAGCTCCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: REWPESLRRATPPKGSTGKLLVI*VHSSST Trigger: AGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTT...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS CCA 90 bp | GAAGGTTGTAGAACTGTTGCACGTGCTCAGCATCTGTGCCTGCAGTaGCCTGGTCGGTGGGACAGTATCTGGAATAATCAAGATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGCRTVARAQHLCLQ*PGRWDSIWNNQDLW Trigger: CCAGAGATCTTGATTATTCCAGATACTGTCCCACCGACCAGGCCACTGCAGGCACAGATGCTGAGCACGTGCAACAGTTCTACAACCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAACCAGTGCTCATTGGGCTTCTGAGTGGATGAATCAGGAACTTGCTACAAGGGCTATACTGGGCTaGCACGCAGGGCATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ESTSAHWASEWMNQELATRAILG*HAGHIH Trigger: GTGGATATGCCCTGCGTGCAAGCCCAGTATAGCCCT...TGTAGCAAGTTCCTGATTCATCCACTCAGAAGCCCAATGAGCACTGGTTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
||
| CDS TCA 90 bp | GCTCCAGAGCCTGTCCCTTCCTCTGGTGGTCCTTTAAGCTGCTTGTaGTCTTGGTGCATAGCTCCTCCACTCTCTTTGGTTCTTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: APEPVPSSGGPLSCL*SWCIAPPLSLVLLT Trigger: GGTTAAAAGAACCAAAGAGAGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGGACCACCAGAGGAAGGGACAGGCTCTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | CGTCTGATCTTCTTTGGGGAGATCAGTGAATCCTGGGATCTTTTCTaGCCAGCTTCTGGACACGTCAATGGAGGCCGTCAGAAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLIFFGEISESWDLF*PASGHVNGGRQKVV Trigger: TACAACCTTCTGACGGCCTCCATTGACGTGTCCAGAAGCTGGGCAGAAAAGATCCCAGGATTCACTGATCTCCCCAAAGAAGATCAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGCAGGTGGATCAAAAGGTTGTAGAACTGTaGCACGTGCTCAGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ESLRRATPPKGSTGQVDQKVVEL*HVLSIC Trigger: ACAGATGCTGAGCACGTGCAACAGTTCTACAACCTT...TTGATCCACCTGCCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | CGAGAATGGCCTGAAAGTCTTAGAAGGGCCACACCTCCGAAGGGTTCTACAGGGTGCAGGACAAGTCCATaGCAGAACACAAACTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: REWPESLRRATPPKGSTGCRTSP*QNTNLS Trigger: AGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCA...CCCTGTAGAACCCTTCGGAGGTGTGGCCCTTCTAAGACTTTCAGGCCATTCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS CCA 90 bp | CAGTGGCCTGGTCGGTGGGACAGTATCTGGAATAATCAAGATCTCTaGGTGTTGCATCTGTTAAAGCTCGGACAAGGGCATTCATCATAC | + |
|
Preference number: 5 (lower is better) Translates to: QWPGRWDSIWNNQDL*VLHLLKLGQGHSSY Trigger: GTATGATGAATGCCCTTGTCCGAGCTTTAACAGATGCAACACCCAGAGATCTTGATTATTCCAGATACTGTCCCACCGACCAGGCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 90 bp | AGTGCTGACAGGCAGGCTAAGGCTTGGATATCAAGGTTCAGGCTCTaGAAGTTTAAAGAAAAGTCTTTAATGGAGTCGAGCCACTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SADRQAKAWISRFRL*KFKEKSLMESSHSP Trigger: TGGGGAGTGGCTCGACTCCATTAAAGACTTTTCTTTAAACTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATAGTGGGCTCTTTGGTTaGGAAGGCAGACGACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYSGLFG*EGRRPL Trigger: GAGAGGTCGTCTGCCTTCCAAACCAAAGAGCCCACT...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTCAAGATCTCTGGGTGTaGCATCTGTTAAAGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSQDLWV*HLLKLG Trigger: TCCGAGCTTTAACAGATGCAACACCCAGAGATCTTG...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 90 bp | TGTCGCTCTGTGATCATACTCAGTGCTGACAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTCTGCAAGTTTAAAGAAAAGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CRSVIILSADRQAKA*ISRFRLCKFKEKSL Trigger: TAAAGACTTTTCTTTAAACTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACTGAGTATGATCACAGAGCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | CCAACCCACCCACCAAAGCCTAAATATAAAACACAACCCCAACACGATACTCTGCCAGGCAAACATATTTaGCATTTTTCTGCACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTHPPKPKYKTQPQHDTLPGKHI*HFSAPF Trigger: GAACGGTGCAGAAAAATGCAAAATATGTTTGCCTGG...CAGAGTATCGTGTTGGGGTTGTGTTTTATATTTAGGCTTTGGTGGGTGGGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATGTTGTAGTGGGCTCTTaGGTTTGGAAGGCAGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYVVVGS*VWKADD Trigger: GTCGTCTGCCTTCCAAACCAAAGAGCCCACTACAAC...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | AAAGGGAATTTTCTGCCTCATTTGCACCACGTATCTACCCTTGACACAGGAAGTTGCAGGACAAGTCCATaGCAGAACACAAACTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: KGNFLPHLHHVSTLDTGSCRTSP*QNTNLS Trigger: AGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCA...ACTTCCTGTGTCAAGGGTAGATACGTGGTGCAAATGAGGCAGAAAATTCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS-3UTR CAA 90 bp | TGCAATACTCAAGGTGCACAAGAAGGTTACGTACGCTCAGTACTTCTAATTTATAAGGTTGTAGAACTGTaGCACGTGCTCAGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CNTQGAQEGYVRSVLLIYKVVEL*HVLSIC Trigger: ACAGATGCTGAGCACGTGCAACAGTTCTACAACCTT...ATAAATTAGAAGTACTGAGCGTACGTAACCTTCTTGTGCACCTTGAGTATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 72 bp | CGGGAGCCCGTATGGGTGGCCCTCGAGCGCAGCAGCTaGGCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: REPVWVALERSS*AACCGRGSQGQ Trigger: CTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 72 bp | GGGAGCCCGTATGGGTGGCCCTCGAGCGCAGCAGCTTaGCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSPYGWPSSAAA*LPAAAAAPRGR Trigger: TCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 72 bp | TGGGTGGCCCTCGAGCGCAGCAGCTTGGCTGCCTGCTaGGGCCGCGGCTCCCAGGGGCAGACTGAGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WVALERSSLAAC*GRGSQGQTECS Trigger: GCTGCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 90 bp | CTTGGCCAGCGGGAGCCCGTATGGGTGGCCCTCGAGCGCAGCAGCTaGGCTGCCTGCTGCGGCCGCGGCTCCCAGGGGCAGACTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGQREPVWVALERSS*AACCGRGSQGQTEC Trigger: GCACTCAGTCTGCCCCTGGGAGCCGCGGCCGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 72 bp | GTGGCCGTCCTCTTGGCCAGCGGGAGCCCGTATGGGTaGCCCTCGAGCGCAGCAGCTTGGCTGCCTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VAVLLASGSPYG*PSSAAAWLPAA Trigger: CGCAGCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAGAGGACGGCCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 72 bp | CAGCGTGGCCGTCCTCTTGGCCAGCGGGAGCCCGTATaGGTGGCCCTCGAGCGCAGCAGCTTGGCTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRGRPLGQREPV*VALERSSLAAC Trigger: GCAGGCAGCCAAGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 72 bp | AGGCCCAGCGGAGGGAAGGTCAGCGTGGCCGTCCTCTaGGCCAGCGGGAGCCCGTATGGGTGGCCCTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPSGGKVSVAVL*ASGSPYGWPSS Trigger: GCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGCTGACCTTCCCTCCGCTGGGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 90 bp | GAGGCTGTGAGGCCCAGCGGAGGGAAGGTCAGCGTGGCCGTCCTCTaGGCCAGCGGGAGCCCGTATGGGTGGCCCTCGAGCGCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAVRPSGGKVSVAVL*ASGSPYGWPSSAAA Trigger: AGCTGCTGCGCTCGAGGGCCACCCATACGGGCTCCCGCTGGCCAAGAGGACGGCCACGCTGACCTTCCCTCCGCTGGGCCTCACAGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS TCA 72 bp | CTGGACTGGGCGCGGGAGGGTGTGGCGGTGAGGGCTTaGAGAAGATCGGGAAGCGCGCAGCAGCGGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LDWAREGVAVRA*RRSGSAQQRPW Trigger: CCATGGCCGCTGCTGCGCGCTTCCCGATCTTCTTCAAGCCCTCACCGCCACACCCTCCCGCGCCCAGTCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 72 bp | CCTTCATCTGCGGGTCCAGCAGCGGTCCCGGAGCGATaGAGCCAGGCGCAGAGGGCAGCTCGTCGTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PSSAGPAAVPER*SQAQRAARRPT Trigger: TGTGGGACGACGAGCTGCCCTCTGCGCCTGGCTGCATCGCTCCGGGACCGCTGCTGGACCCGCAGATGAAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 72 bp | CAGATGATGAGCTCCTATTGGGTGGCGATGGGAGGCTaGGGCTCTCTCCCAGCAGGCTGGACGCGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QMMSSYWVAMGG*GSLPAGWTRWG Trigger: CCCCCACCGCGTCCAGCCTGCTGGGAGAGAGCCCCAGCCTCCCATCGCCACCCAATAGGAGCTCATCATCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 90 bp | TACCTCGTCCTCGGGGCCGGAGGGAGGAGGAATGGACGGCTGCTGTaGCTGGTGGTGGTGGTGATGATGGTGATGGTGATGGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YLVLGAGGRRNGRLL*LVVVVMMVMVMVVV Trigger: CACCACCACCATCACCATCACCATCATCACCACCACCACCAGCAACAGCAGCCGTCCATTCCTCCTCCCTCCGGCCCCGAGGACGAGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 72 bp | CGGCACATGTGCCTTCCCCAGATGATGAGCTCCTATTaGGTGGCGATGGGAGGCTGGGGCTCTCTCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHMCLPQMMSSY*VAMGGWGSLPA Trigger: TGCTGGGAGAGAGCCCCAGCCTCCCATCGCCACCCAATAGGAGCTCATCATCTGGGGAAGGCACATGTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 72 bp | CTCGGGGCCGGAGGGAGGAGGAATGGACGGCTGCTGTaGCTGGTGGTGGTGGTGATGATGGTGATGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LGAGGRRNGRLL*LVVVVMMVMVM Trigger: CATCACCATCACCATCATCACCACCACCACCAGCAACAGCAGCCGTCCATTCCTCCTCCCTCCGGCCCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS CAA 72 bp | ACGGCACATGTGCCTTCCCCAGATGATGAGCTCCTATaGGGTGGCGATGGGAGGCTGGGGCTCTCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TAHVPSPDDELL*GGDGRLGLSPS Trigger: GCTGGGAGAGAGCCCCAGCCTCCCATCGCCACCCAATAGGAGCTCATCATCTGGGGAAGGCACATGTGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS TCA 72 bp | GGTGGTGGTAGCCATGCTCGCGACCCTCTTCCATCTTaGTCAAAGGCCGAGGCCCAGAAGGCGGCATTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGGSHARDPLPS*SKAEAQKAAFG Trigger: ACCAAATGCCGCCTTCTGGGCCTCGGCCTTTGATCAAGATGGAAGAGGGTCGCGAGCATGGCTACCACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS TCA 72 bp | GCCATAAGTCTGCGTGGCGTAAGTGGACCCCGGAGGTaGAGGGCTATACTGGGCTTGCACGCAGGGCATATC | + |
|
Preference number: 6 (lower is better) Translates to: AISLRGVSGPRR*RAILGLHAGHI Trigger: GATATGCCCTGCGTGCAAGCCCAGTATAGCCCTTCACCTCCGGGGTCCACTTACGCCACGCAGACTTATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153369.2 |
||
| CDS GCA 72 bp | GGGAAGCCTGGAGTGGTCGGTGTAGAAGGCGGAGACTaGTTGAAGTACATGGAGGTGCTGGGCAGTACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GKPGVVGVEGGD*LKYMEVLGSTS Trigger: CGAGGTACTGCCCAGCACCTCCATGTACTTCAAGCAGTCTCCGCCTTCTACACCGACCACTCCAGGCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 90 bp | GCTTCTGGACACGTCAATGGAGGCCGTCAGAAGGTTGTAGAACTGTaGCACGTGCTCAGCATCTGTGCCTGCAGTGGCCTGGTCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASGHVNGGRQKVVEL*HVLSICACSGLVGG Trigger: CCCACCGACCAGGCCACTGCAGGCACAGATGCTGAGCACGTGCAACAGTTCTACAACCTTCTGACGGCCTCCATTGACGTGTCCAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS GCA 72 bp | GAAGGTTGTAGAACTGTTGCACGTGCTCAGCATCTGTaGCTGCAGTGGCCTGGTCGGTGGGACAGTATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EGCRTVARAQHL*LQWPGRWDSIW Trigger: CCAGATACTGTCCCACCGACCAGGCCACTGCAGGCACAGATGCTGAGCACGTGCAACAGTTCTACAACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS CCA 72 bp | TGGTGTATTCCGAGCCATAAGTCTGCGTGGCGTAAGTaGACCCCGGAGGTGAAGGGCTATACTGGGCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WCIPSHKSAWRK*TPEVKGYTGLA Trigger: TGCAAGCCCAGTATAGCCCTTCACCTCCGGGGTCCACTTACGCCACGCAGACTTATGGCTCGGAATACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS CAA 72 bp | CACGTCAATGGAGGCCGTCAGAAGGTTGTAGAACTGTaGCACGTGCTCAGCATCTGTGCCTGCAGTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HVNGGRQKVVEL*HVLSICACSGL Trigger: CAGGCCACTGCAGGCACAGATGCTGAGCACGTGCAACAGTTCTACAACCTTCTGACGGCCTCCATTGACGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
||
| CDS TCA 72 bp | CGAGGTCCATGGTCAGCTTGGTGTAGTCGGGGTTCATaGTTTCTGTGGTGTATTCCGAGCCATAAGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGPWSAWCSRGS*FLWCIPSHKSA Trigger: CGCAGACTTATGGCTCGGAATACACCACAGAAATCATGAACCCCGACTACACCAAGCTGACCATGGACCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS GCA 72 bp | TTCTTTGGGGAGATCAGTGAATCCTGGGATCTTTTCTaGCCAGCTTCTGGACACGTCAATGGAGGCCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FFGEISESWDLF*PASGHVNGGRQ Trigger: CTGACGGCCTCCATTGACGTGTCCAGAAGCTGGGCAGAAAAGATCCCAGGATTCACTGATCTCCCCAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 90 bp | AGAGCCTGTCCCTTCCTCTGGTGGTCCTTTAAGCTGCTTGTGATCTaGGTGCATAGCTCCTCCACTCTCTTTGGTTCTTTTAACCCATGT | + |
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Preference number: 6 (lower is better) Translates to: RACPFLWWSFKLLVI*VHSSSTLFGSFNPC Trigger: ACATGGGTTAAAAGAACCAAAGAGAGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGGACCACCAGAGGAAGGGACAGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 72 bp | CCCTTCCTCTGGTGGTCCTTTAAGCTGCTTGTGATCTaGGTGCATAGCTCCTCCACTCTCTTTGGTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PFLWWSFKLLVI*VHSSSTLFGSF Trigger: AAAAGAACCAAAGAGAGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGGACCACCAGAGGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 90 bp | CCTGGTCGGTGGGACAGTATCTGGAATAATCAAGATCTCTGGGTGTaGCATCTGTTAAAGCTCGGACAAGGGCATTCATCATACAGATCG | + |
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Preference number: 6 (lower is better) Translates to: PGRWDSIWNNQDLWV*HLLKLGQGHSSYRS Trigger: CGATCTGTATGATGAATGCCCTTGTCCGAGCTTTAACAGATGCAACACCCAGAGATCTTGATTATTCCAGATACTGTCCCACCGACCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CCA 72 bp | GTGATCATACTCAGTGCTGACAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTCTGCAAGTTTAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VIILSADRQAKA*ISRFRLCKFKE Trigger: TTCTTTAAACTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACTGAGTATGATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS CAA 72 bp | TGGGACAGTATCTGGAATAATCAAGATCTCTGGGTGTaGCATCTGTTAAAGCTCGGACAAGGGCATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: WDSIWNNQDLWV*HLLKLGQGHSS Trigger: TGATGAATGCCCTTGTCCGAGCTTTAACAGATGCAACACCCAGAGATCTTGATTATTCCAGATACTGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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| CDS TCA 72 bp | AACAGCTCCAAAAAGGCTGATTCTATAAGTAACGTCTaGTCTTCTTTGGGGAGATCAGTGAATCCTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: NSSKKADSISNV*SSLGRSVNPGI Trigger: GATCCCAGGATTCACTGATCTCCCCAAAGAAGATCAGACGTTACTTATAGAATCAGCCTTTTTGGAGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030025.10 ENSMUST00000153369.2 |
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