Pregenerated sensors for NR4A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026826Ensembl transcript IDs: ENSMUST00000028166.9, ENSMUST00000112627.2, ENSMUST00000112629.8, ENSMUST00000183542.8
Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTaGAACAAGCAAGCATGGCCAAACATTTCCCATCATACATTAGCA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCYICLN*NKQAWPNISHHTLA Trigger: TGCTAATGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACACACACACACACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR CCA 90 bp | TTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTaGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTC | + |
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Preference number: 1 (lower is better) Translates to: LSTSTVHTTLTNKEC*AVLQTLCVPFVRIF Trigger: GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAGCTCTCTGCCCATGTaGCCAGCCCCCTCTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVCVCYICLNCSSLPM*PAPSGC Trigger: ACATCCAGAGGGGGCTGGTCACATGGGCAGAGAGCT...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCAGCTCTCTGCCCATGTaGCCAGCCCCCTCTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: VCVTFVLTATSKHGQTFPSSLPM*PAPSGC Trigger: ACATCCAGAGGGGGCTGGTCACATGGGCAGAGAGCT...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCGCCCCGGAGCCAAAATaGCCTTTCAGGTTCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVCVCYICLNCAPEPK*PFRFCL Trigger: CAGGCAGAACCTGAAAGGGCATTTTGGCTCCGGGGC...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCCCTGTGTGCAAAGGGTaGGGAGTTCTGGCAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVCVCYICLNCPVCKG*GVLAAS Trigger: GGAAGCTGCCAGAACTCCGCACCCTTTGCACACAGG...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCGCCCCGGAGCCAAAATaGCCTTTCAGGTTCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KECWAVLQTLCVPFVRIFAPEPK*PFRFCL Trigger: CAGGCAGAACCTGAAAGGGCATTTTGGCTCCGGGGC...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACAAGGGTGCGGAGTTCTaGCAGCTTCCCCAACAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCYICLNCNKQAWPNKGAEF*QLPQQF Trigger: AAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTT...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCCTTTCAGGTTCTGCCTaGAGGTTAGGAAATAGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVCVCYICLNCLSGSA*RLGNSD Trigger: GTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR CAA 90 bp | TCTTTAAGACAATTTACAATTTTGTTTTGTAGCTCTTCCACTCTCTaGGGTTCCTTGAGCCCGTGTCTCTCTGTGACCATAGCCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLRQFTILFCSSSTL*GSLSPCLSVTIARA Trigger: TGCCCTGGCTATGGTCACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCTACAAAACAAAATTGTAAATTGTCTTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCTTTCAGGTTCTGCCTaGAGGTTAGGAAATAGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: VCVTFVLTATSKHGQTFPLSGSA*RLGNSD Trigger: GTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTTTCTTTCCAGTTCTTTaGCGTGCTTGGGAGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSGSACRLGNSDSFYLWFFFPVL*RAWEKV Trigger: GACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAA...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCTTCTTTCCAGTTCTTTaGCGTGCTTGGGAGAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CVCYICLNCNKQAWPNISFFPVL*RAWEKV Trigger: GACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAA...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTTTCAGGTTCTGCCTaGAGGTTAGGAAATAGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: CVCYICLNCNKQAWPNISLSGSA*RLGNSD Trigger: GTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTACCACTGTACTGTGTaGTGTCCGTTTTCTAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: TTLTNKECWAVLQTLCVPYHCTV*CPFSKS Trigger: GGATTTAGAAAACGGACAGCACACAGTACAGTGGTA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTACCACTGTACTGTGTaGTGTCCGTTTTCTAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: VCVTFVLTATSKHGQTFPYHCTV*CPFSKS Trigger: GGATTTAGAAAACGGACAGCACACAGTACAGTGGTA...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACTACCACTGTACTGTGTaGTGTCCGTTTTCTAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCYICLNCNKQAWPNYHCTV*CPFSKS Trigger: GGATTTAGAAAACGGACAGCACACAGTACAGTGGTA...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATAAATTTACAAGCCTCTaGCTTCAATTCATGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDKFTSL*LQFMPP Trigger: GGGTGGCATGAATTGAAGGCAGAGGCTTGTAAATTT...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCTGCAACAAGCAAGCATaGCCAAACATTTCCCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: KECWAVLQTLCVPFVRIFCNKQA*PNISHH Trigger: ATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCA...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR CAA 90 bp | CAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTaGTCAGGATTTTCCAATGTACTGATACTTGTGCCCACCTATTAT | + |
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Preference number: 2 (lower is better) Translates to: QTRNVGRCYKHYVSL*SGFSNVLILVPTYY Trigger: ATAATAGGTGGGCACAAGTATCAGTACATTGGAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCGTCAATTATTGCTGGTaGTGGTACCAAGTCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: CVCYICLNCNKQAWPNISVNYCW*WYQVFQ Trigger: TTGGAAGACTTGGTACCACCACCAGCAATAATTGAC...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTTCTTTCCAGTTCTTTaGCGTGCTTGGGAGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYFFPVL*RAWEKV Trigger: GACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGAAATTTACAAGCCTCTaGCTTCAATTCATGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVKFTSL*LQFMPP Trigger: GGGTGGCATGAATTGAAGGCAGAGGCTTGTAAATTT...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATAAAGCCAAACTGCATTaGATAAATTTACAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDKAKLH*INLQAS Trigger: AGAGGCTTGTAAATTTATCCAATGCAGTTTGGCTTT...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAATTATTGCTGGTGGTaGTACCAAGTCTTCCAATTT | + |
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Preference number: 2 (lower is better) Translates to: YICLNCNKQAWPNISHHTNYCWW*YQVFQF Trigger: AAATTGGAAGACTTGGTACCACCACCAGCAATAATT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACGATTTTCCAATGTACTaGTACTTGTGCCCACCTATT | + |
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Preference number: 2 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYDFPMY*YLCPPI Trigger: AATAGGTGGGCACAAGTATCAGTACATTGGAAAATC...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTACATTTGTCTTAACTaGAACAAGCAAGCATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYYICLN*NKQAWP Trigger: TGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGTACATTTGTCTTAACTaGAACAAGCAAGCATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGYICLN*NKQAWP Trigger: TGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACCAACCTAGAATCACATaGTTGTCCCCTTTTTATGTA | + |
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Preference number: 2 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYQPRIT*LSPFYV Trigger: TACATAAAAAGGGGACAAGCATGTGATTCTAGGTTG...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGAAAGCCAAACTGCATTaGATAAATTTACAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGKAKLH*INLQAS Trigger: AGAGGCTTGTAAATTTATCCAATGCAGTTTGGCTTT...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR CCA 72 bp | GCGCTGGAGGCCCTGTGTGCAAAGGGTGCGGAGTTCTaGCAGCTTCCCCAACAGTTTAGACAGGTAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: ALEALCAKGAEF*QLPQQFRQVVG Trigger: CCCAACTACCTGTCTAAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTTTGCACACAGGGCCTCCAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR CCA 72 bp | AGGGCTAGGGGTCTACAGAAGGGAGATAAGGTGAACTaGACACTTCAACCAGCTCTCTGCCCATGTGACCAG | + |
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Preference number: 3 (lower is better) Translates to: RARGLQKGDKVN*TLQPALCPCDQ Trigger: CTGGTCACATGGGCAGAGAGCTGGTTGAAGTGTCCAGTTCACCTTATCTCCCTTCTGTAGACCCCTAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR GCA 72 bp | ACTGTACTGTGTGCTGTCCGTTTTCTAAATCCAGGATaGCCCGGAGCCAAAATGCCCTTTCAGGTTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: TVLCAVRFLNPG*PGAKMPFQVLP Trigger: AGGCAGAACCTGAAAGGGCATTTTGGCTCCGGGGCATCCTGGATTTAGAAAACGGACAGCACACAGTACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCACTCTCTTGGGTTCCTaGAGCCCGTGTCTCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VCVTFVLTATSKHGQTFPTLLGS*SPCLSV Trigger: CACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGT...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCTTTCCAGTTCTTaGACGTGCTTGGGAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDFLSSS*TCLGEG Trigger: ACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAAA...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTCTTTCCAGTTCTTaGACGTGCTTGGGAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: TTLTNKECWAVLQTLCVPFLSSS*TCLGEG Trigger: ACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAAA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGAGCTCTTCCACTCTCTaGGGTTCCTTGAGCCCGTGT | + |
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Preference number: 3 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGSSSTL*GSLSPC Trigger: ACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCT...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACAGTTCTTTGACGTGCTaGGGAGAAGGTCTTAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCYICLNCNKQAWPNSSLTC*GEGLRK Trigger: CTTTCTAAGACCTTCTCCCAAGCACGTCAAAGAACT...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATGTGTCCAGGAAAAGTTaGTCAATTATTGCTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDVSRKS*SIIAGG Trigger: ACCACCAGCAATAATTGACAAACTTTTCCTGGACAC...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTaGAACAAGCAAGCATGGCCAAACATTTCCCATCAT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCYICLN*NKQAWPNISHH Trigger: ATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACACACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR CCA 72 bp | TCAACGGTACATACAACACTTACAAACAAGGAATGTTaGGCGGTGTTACAAACACTATGTGTCCCTTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: STVHTTLTNKEC*AVLQTLCVPFV Trigger: GACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| 3UTR-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATTTCTTTCCAGTTCTTaGACGTGCTTGGGAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YICLNCNKQAWPNISHHTFLSSS*TCLGEG Trigger: ACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAAA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTCCTAGAATCACATGCTaGTCCCCTTTTTATGTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TTLTNKECWAVLQTLCVPPRITC*SPFYVV Trigger: AACTACATAAAAAGGGGACAAGCATGTGATTCTAGG...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATCCTAGAATCACATGCTaGTCCCCTTTTTATGTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDPRITC*SPFYVV Trigger: AACTACATAAAAAGGGGACAAGCATGTGATTCTAGG...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTCAAACCCCCATTATaGAAAGTCACATGGTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TTLTNKECWAVLQTLCVPFKPPL*KVTWSL Trigger: TAAAGACCATGTGACTTTCAATAATGGGGGTTTGAA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
||
| 3UTR GCA 72 bp | AAAAGCCAAACTGCATTGGATAAATTTACAAGCCTCTaGCTTCAATTCATGCCACCCACGCAACATTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSQTALDKFTSL*LQFMPPTQHLV Trigger: AACTAAATGTTGCGTGGGTGGCATGAATTGAAGGCAGAGGCTTGTAAATTTATCCAATGCAGTTTGGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGTTTCTTTCCAGTTCTTaGACGTGCTTGGGAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGFLSSS*TCLGEG Trigger: ACCTTCTCCCAAGCACGTCAAAGAACTGGAAAGAAA...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGAAAAGCCAAACTGCATaGGATAAATTTACAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMKSQTA*DKFTSL Trigger: GAGGCTTGTAAATTTATCCAATGCAGTTTGGCTTTT...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR CCA 72 bp | GCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTaGTTTGTTTGTTTGTTTGTTTACTTAAGGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ACRLGNSDSFYL*FVCLFVYLRGE Trigger: CTCACCCCTTAAGTAAACAAACAAACAAACAAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGCACTATGTGTCCCTTTaGTCAGGATTTTCCAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGHYVSL*SGFSNV Trigger: TACATTGGAAAATCCTGACAAAAGGGACACATAGTG...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACAAAGTTTGTCAATTATaGCTGGTGGTGGTACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYKVCQL*LVVVPS Trigger: ACTTGGTACCACCACCAGCAATAATTGACAAACTTT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
||
| 3UTR TCA 72 bp | ACTATATATTACAGCTTTCTTTACAGCAGAAAACTTTaGAGTCTTGTTAAAGGGCAAAATAGGAGGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TIYYSFLYSRKL*SLVKGQNRRVP Trigger: TGGGACCCTCCTATTTTGCCCTTTAACAAGACTTCAAAGTTTTCTGCTGTAAAGAAAGCTGTAATATATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTGTGTGCAAAGGGTGCGGAGTTCTGGCAGCTTCCCCAACAGTTTAGACGGCCCGGGAAGCCCATaGATGCCGGCTTGCGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RPCVQRVRSSGSFPNSLDGPGSP*MPACEW Trigger: CCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCC...GTCTAAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTTTGCACACAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGCAAAGGGTGCGGAGTTCTGGCAGCTTCCCCAACAGTTTAGACAGGTACGGGAAGCCCATGGATaGCGGCTTGCGAATGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCAKGAEFWQLPQQFRQVREAHG*RLANGV Trigger: AACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCG...TACCTGTCTAAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTTTGCACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCGGAAGCTCGGGGTGCTaGGTGTCGGGGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCGSSGC*VSGAKR Trigger: CCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCC...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCCGGGCTCCGGGTTCATaGGGACGTGCAGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCRAPGS*GRAEAR Trigger: ACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCG...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCCATCCACTACGTGGTaGCTGCCCGCGGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPPSTTW*LPAGSG Trigger: CCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGG...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACCCATCCACTACGTGGTaGCTGCCCGCGGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNPSTTW*LPAGSG Trigger: CCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGG...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTCCATCCACTACGTGGTaGCTGCCCGCGGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPPSTTW*LPAGSG Trigger: CCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGG...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCGCGGGGCTGGCTCCTTaGGGCGAGGACCCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFAGLAP*GEDPYC Trigger: GCAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGC...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATCCTGGAAGCTCGGGGTaGTGGGTGTCGGGGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDPGSSG*WVSGAK Trigger: CTTCGCCCCCGACACCCAGCACCCCGAGCTTCCAGG...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCGATGCGTGGCCGATCTaGAGGCCCGGGAAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCDAWPI*RPGKPM Trigger: CATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATC...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGGAAGCTCGGGGTGCTaGGTGTCGGGGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPGSSGC*VSGAKR Trigger: CCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCGGGCTCCGGGTTCATaGGGACGTGCAGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPRAPGS*GRAEAR Trigger: ACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCG...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAGCAACTGCGATGCGTaGCCGATCTGCAGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCSNCDA*PICRPG Trigger: CCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCT...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGGCGGGGCTGGCTCCTTaGGGCGAGGACCCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMAGLAP*GEDPYC Trigger: GCAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGC...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTGGGTTCATGGGGACGTaGAGAGGCCCGTCGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPGFMGT*RGPSKR Trigger: GCGCTTCGACGGGCCTCTGCACGTCCCCATGAACCC...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCCCATGGATGCCGGCTTaGGAATGGGGTTGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCPWMPA*EWGWAR Trigger: CCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGG...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACGATGCGTGGCCGATCTaGAGGCCCGGGAAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNDAWPI*RPGKPM Trigger: CATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATC...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTGGAAGCTCGGGGTGCTaGGTGTCGGGGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFGSSGC*VSGAKR Trigger: CCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCC...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCATGCCGGCTTGCGAATaGGGTTGGGCACGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCMPACE*GWARRR Trigger: CCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCAT...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATAGCAACTGCGATGCGTaGCCGATCTGCAGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDSNCDA*PICRPG Trigger: CCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCT...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTGGGTTCATGGGGACGTaGAGAGGCCCGTCGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFGFMGT*RGPSKR Trigger: GCGCTTCGACGGGCCTCTGCACGTCCCCATGAACCC...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCGGGTTCATGGGGACGTaGAGAGGCCCGTCGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISGFMGT*RGPSKR Trigger: GCGCTTCGACGGGCCTCTGCACGTCCCCATGAACCC...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCCCATGGATGCCGGCTTaGGAATGGGGTTGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFPWMPA*EWGWAR Trigger: CCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGG...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCCATGGATGCCGGCTTaGGAATGGGGTTGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPPWMPA*EWGWAR Trigger: CCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGG...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTGATGCGTGGCCGATCTaGAGGCCCGGGAAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFDAWPI*RPGKPM Trigger: CATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATC...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTCTGAGAAGCGGGGCTaGCTCCTTGAGGCGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPSEKRG*LLEART Trigger: GGTCCTCGCCTCAAGGAGCCAGCCCCGCTTCTCAGA...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTCTGAGAAGCGGGGCTaGCTCCTTGAGGCGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPSEKRG*LLEART Trigger: GGTCCTCGCCTCAAGGAGCCAGCCCCGCTTCTCAGA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAGGAAGCTCGGGGTGCTaGGTGTCGGGGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTGSSGC*VSGAKR Trigger: CCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCC...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACACGGGCTCCGGGTTCATaGGGACGTGCAGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTRAPGS*GRAEAR Trigger: ACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCG...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGCGGGCTCCGGGTTCATaGGGACGTGCAGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVRAPGS*GRAEAR Trigger: ACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCG...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCATGCCGGCTTGCGAATaGGGTTGGGCACGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFMPACE*GWARRR Trigger: CCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCAT...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCGGCCCGGGAAGCCCATaGATGCCGGCTTGCGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISGPGSP*MPACEW Trigger: CCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCC...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTCGCACAGACCCTCATTaGAGGGAGAGCCCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFRTDPH*RESPGT Trigger: CGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCG...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGCGCACAGACCCTCATTaGAGGGAGAGCCCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMRTDPH*RESPGT Trigger: CGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCG...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTGGGAGAGGGATCCTGTaGGCTCTTCGGCTTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPGRGIL*ALRLRG Trigger: CCCTCGAAGCCGAAGAGCCCACAGGATCCCTCTCCC...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGGGAGAGGGATCCTGTaGGCTCTTCGGCTTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPGRGIL*ALRLRG Trigger: CCCTCGAAGCCGAAGAGCCCACAGGATCCCTCTCCC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTCCCACATCGGGCTATaGTGCACCTGGAAGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDSHIGL*CTWKLG Trigger: CCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGA...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACTCCCACATCGGGCTATaGTGCACCTGGAAGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNSHIGL*CTWKLG Trigger: CCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGA...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCGGGAAGCCCATGGATaGCGGCTTGCGAATGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPREAHG*RLANGV Trigger: AACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCG...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGGATGCGTGGCCGATCTaGAGGCCCGGGAAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVDAWPI*RPGKPM Trigger: CATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATC...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATGTCAAGCAACTGCGATaGGTGGCCGATCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDVKQLR*VADLQA Trigger: GGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGAC...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACGTCAAGCAACTGCGATaGGTGGCCGATCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNVKQLR*VADLQA Trigger: GGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGAC...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCTGCGTGTCAAGCAACTaGGATGCGTGGCCGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCCVSSN*DAWPIC Trigger: GCAGATCGGCCACGCATCGCAGTTGCTTGACACGCA...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGGGCCCGGGAAGCCCATaGATGCCGGCTTGCGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVGPGSP*MPACEW Trigger: CCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCC...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAGCAACTGCGATGCGTaGCCGATCTGCAGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTSNCDA*PICRPG Trigger: CCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACACGCACAGACCCTCATTaGAGGGAGAGCCCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTRTDPH*RESPGT Trigger: CGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCG...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTGGGAGAGGGATCCTGTaGGCTCTTCGGCTTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFGRGIL*ALRLRG Trigger: CCCTCGAAGCCGAAGAGCCCACAGGATCCCTCTCCC...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATGGTCCTGGTCGGCTTTaGGCAGGTCAGCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDGPGRL*AGQQSQ Trigger: CTGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACC...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGGTCCTGGTCGGCTTTaGGCAGGTCAGCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPGPGRL*AGQQSQ Trigger: CTGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTCTGGTGGAAGTTGTaGAGGGAGCCCGGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDFWWKL*REPGSS Trigger: GGACGATCCGGGCTCCCTTCACAACTTCCACCAGAA...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTCTGGTGGAAGTTGTaGAGGGAGCCCGGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPFWWKL*REPGSS Trigger: GGACGATCCGGGCTCCCTTCACAACTTCCACCAGAA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGTGCCCGGGGGCGACTaGTTAAAGGAGAAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPVPGGD*LKEKSD Trigger: GTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCAC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGCGGGAAGCCCATGGATaGCGGCTTGCGAATGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMREAHG*RLANGV Trigger: AACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCG...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGGGAAGCCCATGGATaGCGGCTTGCGAATGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISREAHG*RLANGV Trigger: AACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCG...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTGCGTGTCAAGCAACTaGGATGCGTGGCCGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDCVSSN*DAWPIC Trigger: GCAGATCGGCCACGCATCGCAGTTGCTTGACACGCA...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTGCGTGTCAAGCAACTaGGATGCGTGGCCGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPCVSSN*DAWPIC Trigger: GCAGATCGGCCACGCATCGCAGTTGCTTGACACGCA...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCTGCGTGTCAAGCAACTaGGATGCGTGGCCGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFCVSSN*DAWPIC Trigger: GCAGATCGGCCACGCATCGCAGTTGCTTGACACGCA...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCGCCAGGGATCTTCTCTaGCCACCCTCTGATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCARDLL*PPSDDL Trigger: GAGATCATCAGAGGGTGGGCAGAGAAGATCCCTGGC...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACAACCGACCCGCTGTGTaGCATCATCTCCTCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNNRPAV*HHLLGL Trigger: CAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTT...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCAACCGACCCGCTGTGTaGCATCATCTCCTCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPNRPAV*HHLLGL Trigger: CAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTT...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTCCGTCGAAGCGCATCTaGCAGCTAGACACAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPPSKRI*QLDTGV Trigger: CACTCCTGTGTCTAGCTGCCAGATGCGCTTCGACGG...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAATGCCGGCTTGCGAATaGGGTTGGGCACGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTMPACE*GWARRR Trigger: CCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCAT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGGGGAGAGGGATCCTGTaGGCTCTTCGGCTTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVGRGIL*ALRLRG Trigger: CCCTCGAAGCCGAAGAGCCCACAGGATCCCTCTCCC...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATGGATTGGAATCGACGTaGGCTCTGACGAGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDGLEST*ALTRAL Trigger: CAGTGCCCTCGTCAGAGCCCACGTCGATTCCAATCC...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGGATTGGAATCGACGTaGGCTCTGACGAGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPGLEST*ALTRAL Trigger: CAGTGCCCTCGTCAGAGCCCACGTCGATTCCAATCC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCGGTCCTGGTCGGCTTTaGGCAGGTCAGCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISGPGRL*AGQQSQ Trigger: CTGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACC...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACACAAGCAAGGTGGCTTaGCGTCGTAGCCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNTSKVA*RRSLCC Trigger: ACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGT...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATACAAGCAAGGTGGCTTaGCGTCGTAGCCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDTSKVA*RRSLCC Trigger: ACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGT...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTTTCTGGTGGAAGTTGTaGAGGGAGCCCGGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFFWWKL*REPGSS Trigger: GGACGATCCGGGCTCCCTTCACAACTTCCACCAGAA...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATCCCACATCGGGCTATaGTGCACCTGGAAGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTSHIGL*CTWKLG Trigger: CCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGGGGTTCATGGGGACGTaGAGAGGCCCGTCGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGGFMGT*RGPSKR Trigger: GCGCTTCGACGGGCCTCTGCACGTCCCCATGAACCC...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAGTCAAGCAACTGCGATaGGTGGCCGATCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTVKQLR*VADLQA Trigger: GGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGAC...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGTCCAGGCTGGTCATTaGCGGATTGGAATCGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPVQAGH*RIGIDV Trigger: CACGTCGATTCCAATCCGGCAATGACCAGCCTGGAC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATGCCAGGGATCTTCTCTaGCCACCCTCTGATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDARDLL*PPSDDL Trigger: GAGATCATCAGAGGGTGGGCAGAGAAGATCCCTGGC...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGCCTGTGTGCAAAGGGTaGGGAGTTCTGGCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMPVCKG*GVLAAS Trigger: GGAAGCTGCCAGAACTCCGCACCCTTTGCACACAGG...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCTGTGTGCAAAGGGTaGGGAGTTCTGGCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISPVCKG*GVLAAS Trigger: GGAAGCTGCCAGAACTCCGCACCCTTTGCACACAGG...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTCCTGTGTGCAAAGGGTaGGGAGTTCTGGCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFPVCKG*GVLAAS Trigger: GGAAGCTGCCAGAACTCCGCACCCTTTGCACACAGG...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCCGGACAGGGGCATTTaGTACAAGCAAGGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPPDRGI*YKQGGL Trigger: CAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGG...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGAACCGACCCGCTGTGTaGCATCATCTCCTCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMNRPAV*HHLLGL Trigger: CAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTT...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTCCGTCGAAGCGCATCTaGCAGCTAGACACAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFPSKRI*QLDTGV Trigger: CACTCCTGTGTCTAGCTGCCAGATGCGCTTCGACGG...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACCGCACAGACCCTCATTaGAGGGAGAGCCCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYRTDPH*RESPGT Trigger: CGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCG...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR TCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATTCTGGTGGAAGTTGTaGAGGGAGCCCGGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTFWWKL*REPGSS Trigger: GGACGATCCGGGCTCCCTTCACAACTTCCACCAGAA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCACCTTAATGGAGGACTaGTGTCCGGACAGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFTLMED*CPDRGI Trigger: AATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGT...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTAAGCCACGCACGCATTaGAACCTGTGCAAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFKPRTH*NLCKTT Trigger: GGTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTT...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCTTGGTACAAGCAAGGTaGCTTGACGTCGTAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCLVQAR*LDVVAC Trigger: ACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAA...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCCGGACAGGGGCATTTaGTACAAGCAAGGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISPDRGI*YKQGGL Trigger: CAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGG...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAACCGACCCGCTGTGTaGCATCATCTCCTCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTNRPAV*HHLLGL Trigger: CAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACATGCCGGCTTGCGAATaGGGTTGGGCACGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYMPACE*GWARRR Trigger: CCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCAT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACGGTTTGCCTGGAACCTaGAATAGTCCAGGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNGLPGT*NSPGWS Trigger: TGACCAGCCTGGACTATTCCAGGTTCCAGGCAAACC...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTCAAAAAGCAGGTCCTaGTCGGCTTTGGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPSKSRS*SALGRS Trigger: TGACCTGCCCAAAGCCGACCAGGACCTGCTTTTTGA...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTACCCTCCACTGGGTTaGACCTGTATGCTAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVTFVLTATSKHGQTFPYPPLG*TCMLSA Trigger: TGCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTA...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCTACCCTCCACTGGGTTaGACCTGTATGCTAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFYPPLG*TCMLSA Trigger: TGCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTA...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACCCCCATTGCAAAAGATaGGTTTACCCTCCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNPHCKR*VYPPLG Trigger: ACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGG...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR TCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTCCCCATTGCAAAAGATaGGTTTACCCTCCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPPHCKR*VYPPLG Trigger: ACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGG...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGACCTTAATGGAGGACTaGTGTCCGGACAGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMTLMED*CPDRGI Trigger: AATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGT...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTACCTTAATGGAGGACTaGTGTCCGGACAGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFTLMED*CPDRGI Trigger: AATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGT...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTCCCACATCGGGCTATaGTGCACCTGGAAGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYSHIGL*CTWKLG Trigger: CCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGGTCAAGCAACTGCGATaGGTGGCCGATCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGVKQLR*VADLQA Trigger: GGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGAC...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAGTCCAGGCTGGTCATTaGCGGATTGGAATCGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTVQAGH*RIGIDV Trigger: CACGTCGATTCCAATCCGGCAATGACCAGCCTGGAC...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCACGCATTGCAACCTGTaGAAGACCACCCCATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFTHCNL*KTTPLQ Trigger: TTGCAATGGGGTGGTCTTGCACAGGTTGCAATGCGT...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAAGCCACGCACGCATTaGAACCTGTGCAAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTKPRTH*NLCKTT Trigger: GGTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACACCGGACAGGGGCATTTaGTACAAGCAAGGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTPDRGI*YKQGGL Trigger: CAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGG...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCTGGAATAGTCCAGGCTaGTCATTGCCGGATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCWNSPG*SLPDWN Trigger: ATTCCAATCCGGCAATGACCAGCCTGGACTATTCCA...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTGGTTTGCCTGGAACCTaGAATAGTCCAGGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFGLPGT*NSPGWS Trigger: TGACCAGCCTGGACTATTCCAGGTTCCAGGCAAACC...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACGGTCCTGGTCGGCTTTaGGCAGGTCAGCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYGPGRL*AGQQSQ Trigger: CTGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACC...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTACCCTCCACTGGGTTaGACCTGTATGCTAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMYPPLG*TCMLSA Trigger: TGCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTA...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTCCCCATTGCAAAAGATaGGTTTACCCTCCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFPHCKR*VYPPLG Trigger: ACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGG...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGACCTTAATGGAGGACTaGTGTCCGGACAGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVTLMED*CPDRGI Trigger: AATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGT...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGGTGCCCGGGGGCGACTaGTTAAAGGAGAAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGVPGGD*LKEKSD Trigger: GTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCAC...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCACGCATTGCAACCTGTaGAAGACCACCCCATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISTHCNL*KTTPLQ Trigger: TTGCAATGGGGTGGTCTTGCACAGGTTGCAATGCGT...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCTTGGTACAAGCAAGGTaGCTTGACGTCGTAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISLVQAR*LDVVAC Trigger: ACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAA...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTGGAATAGTCCAGGCTaGTCATTGCCGGATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPWNSPG*SLPDWN Trigger: ATTCCAATCCGGCAATGACCAGCCTGGACTATTCCA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATCAAAAAGCAGGTCCTaGTCGGCTTTGGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTSKSRS*SALGRS Trigger: TGACCTGCCCAAAGCCGACCAGGACCTGCTTTTTGA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGAAGGGTGCGGAGTTCTaGCAGCTTCCCCAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVKGAEF*QLPQQF Trigger: AAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTT...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACACAAGCAAGGTGGCTTaGCGTCGTAGCCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYTSKVA*RRSLCC Trigger: ACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGGTCCAGGCTGGTCATTaGCGGATTGGAATCGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGVQAGH*RIGIDV Trigger: CACGTCGATTCCAATCCGGCAATGACCAGCCTGGAC...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACGTCCAGGCTGGTCATTaGCGGATTGGAATCGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYVQAGH*RIGIDV Trigger: CACGTCGATTCCAATCCGGCAATGACCAGCCTGGAC...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGAAGCCACGCACGCATTaGAACCTGTGCAAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGKPRTH*NLCKTT Trigger: GGTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTT...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTTGGTACAAGCAAGGTaGCTTGACGTCGTAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVLVQAR*LDVVAC Trigger: ACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAA...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCTGGAATAGTCCAGGCTaGTCATTGCCGGATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISWNSPG*SLPDWN Trigger: ATTCCAATCCGGCAATGACCAGCCTGGACTATTCCA...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACTGCTGGATATGTTaGGTATCATCTCCACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCNCWIC*VSSPLI Trigger: GATGAGTGGAGATGATACCCAACATATCCAGCAGTT...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR CAA 72 bp | AATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTaGTCAGGATTTTCCAATGTACTGATACTTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NVGRCYKHYVSL*SGFSNVLILVP Trigger: GGGCACAAGTATCAGTACATTGGAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| 3UTR CAA 72 bp | CAATTTACAATTTTGTTTTGTAGCTCTTCCACTCTCTaGGGTTCCTTGAGCCCGTGTCTCTCTGTGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: QFTILFCSSSTL*GSLSPCLSVTI Trigger: TATGGTCACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCTACAAAACAAAATTGTAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTGGAATAGTCCAGGCTaGTCATTGCCGGATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVWNSPG*SLPDWN Trigger: ATTCCAATCCGGCAATGACCAGCCTGGACTATTCCA...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTCAAAAAGCAGGTCCTaGTCGGCTTTGGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYSKSRS*SALGRS Trigger: TGACCTGCCCAAAGCCGACCAGGACCTGCTTTTTGA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACAAGGGTGCGGAGTTCTaGCAGCTTCCCCAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYKGAEF*QLPQQF Trigger: AAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTGTCAATTATTGCTGGTaGTGGTACCAAGTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPVNYCW*WYQVFQ Trigger: TTGGAAGACTTGGTACCACCACCAGCAATAATTGAC...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACGTCAATTATTGCTGGTaGTGGTACCAAGTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNVNYCW*WYQVFQ Trigger: TTGGAAGACTTGGTACCACCACCAGCAATAATTGAC...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTAACTGCTGGATATGTTaGGTATCATCTCCACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFNCWIC*VSSPLI Trigger: GATGAGTGGAGATGATACCCAACATATCCAGCAGTT...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAATTATTGCTGGTGGTaGTACCAAGTCTTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVCYICLNCNYCWW*YQVFQF Trigger: AAATTGGAAGACTTGGTACCACCACCAGCAATAATT...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACTTTGTCAATTATTGCTaGTGGTGGTACCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNFVNYC*WWYQVF Trigger: GAAGACTTGGTACCACCACCAGCAATAATTGACAAA...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCTTTGTCAATTATTGCTaGTGGTGGTACCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KECWAVLQTLCVPFVRIFFVNYC*WWYQVF Trigger: GAAGACTTGGTACCACCACCAGCAATAATTGACAAA...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTCGATGTTCATATTCTaGAAGTTGGAGGAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDSMFIF*KLEENS Trigger: TGAATTCTCCTCCAACTTGCAGAATATGAACATCGA...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACTCGATGTTCATATTCTaGAAGTTGGAGGAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCYICLNCNKQAWPNSMFIF*KLEENS Trigger: TGAATTCTCCTCCAACTTGCAGAATATGAACATCGA...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAACTGCTGGATATGTTaGGTATCATCTCCACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YICLNCNKQAWPNISHHTNCWIC*VSSPLI Trigger: GATGAGTGGAGATGATACCCAACATATCCAGCAGTT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTAATTATTGCTGGTGGTaGTACCAAGTCTTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLTNKECWAVLQTLCVPNYCWW*YQVFQF Trigger: AAATTGGAAGACTTGGTACCACCACCAGCAATAATT...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCTTTGTCAATTATTGCTaGTGGTGGTACCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCYICLNCNKQAWPNISFVNYC*WWYQVF Trigger: GAAGACTTGGTACCACCACCAGCAATAATTGACAAA...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTTCATATTCTGCAAGTTaGAGGAGAATTCAACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSACRLGNSDSFYLWFSYSAS*RRIQQW Trigger: CCATTGTTGAATTCTCCTCCAACTTGCAGAATATGA...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR GCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCGATGTTCATATTCTaGAAGTTGGAGGAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVSMFIF*KLEENS Trigger: TGAATTCTCCTCCAACTTGCAGAATATGAACATCGA...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACAACTGCTGGATATGTTaGGTATCATCTCCACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYNCWIC*VSSPLI Trigger: GATGAGTGGAGATGATACCCAACATATCCAGCAGTT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCATATTCTGCAAGTTaGAGGAGAATTCAACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVSYSAS*RRIQQW Trigger: CCATTGTTGAATTCTCCTCCAACTTGCAGAATATGA...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGAATTATTGCTGGTGGTaGTACCAAGTCTTCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVNYCWW*YQVFQF Trigger: AAATTGGAAGACTTGGTACCACCACCAGCAATAATT...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTCATATTCTGCAAGTTaGAGGAGAATTCAACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYSYSAS*RRIQQW Trigger: CCATTGTTGAATTCTCCTCCAACTTGCAGAATATGA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS GCA 90 bp | GCCCCGGGACGGCGGCGAGGGCACCTGCGTGTCAAGCAACTGCGATaGGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APGRRRGHLRVKQLR*VADLQAREAHGCRL Trigger: AAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCGTCCCGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS GCA 90 bp | GGAGAGCCCCGGGACGGCGGCGAGGGCACCTGCGTGTCAAGCAACTaGGATGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEPRDGGEGTCVSSN*DAWPICRPGKPMDA Trigger: GGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCGTCCCGGGGCTCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS GCA 90 bp | AGACCCTCATTGGAGGGAGAGCCCCGGGACGGCGGCGAGGGCACCTaGGTGTCAAGCAACTGCGATGCGTGGCCGATCTGCAGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSLEGEPRDGGEGT*VSSNCDAWPICRPG Trigger: CCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCGTCCCGGGGCTCTCCCTCCAATGAGGGTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS CCA 90 bp | CGAATGGGGTTGGGCACGGCGAAGGTCTGCCCATCCACTACGTGGTaGCTGCCCGCGGGCTCCGGGTTCATGGGGACGTGCAGAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RMGLGTAKVCPSTTW*LPAGSGFMGTCRGP Trigger: CGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS CCA 90 bp | CGGGACGGCGGCGAGGGCACCTGCGTGTCAAGCAACTGCGATGCGTaGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RDGGEGTCVSSNCDA*PICRPGKPMDAGLR Trigger: TCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCGTCCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS GCA 90 bp | CCCATGGATGCCGGCTTGCGAATGGGGTTGGGCACGGCGAAGGTCTaGCCATCCACTACGTGGTGGCTGCCCGCGGGCTCCGGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PMDAGLRMGLGTAKV*PSTTWWLPAGSGFM Trigger: CATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS CCA 90 bp | TTGCGAATGGGGTTGGGCACGGCGAAGGTCTGCCCATCCACTACGTaGTGGCTGCCCGCGGGCTCCGGGTTCATGGGGACGTGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRMGLGTAKVCPSTT*WLPAGSGFMGTCRG Trigger: GCCTCTGCACGTCCCCATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS CCA 90 bp | GGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTTGCGAATaGGGTTGGGCACGGCGAAGGTCTGCCCATCCACTACGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRSAGPGSPWMPACE*GWARRRSAHPLRGG Trigger: GCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 90 bp | GCTGACAGGCCGCGTTGTCACCGCAAACAGCGCACAGACCCTCATTaGAGGGAGAGCCCCGGGACGGCGGCGAGGGCACCTGCGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ADRPRCHRKQRTDPH*RESPGTAARAPACQ Trigger: TTGACACGCAGGTGCCCTCGCCGCCGTCCCGGGGCTCTCCCTCCAATGAGGGTCTGTGCGCTGTTTGCGGTGACAACGCGGCCTGTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 90 bp | TCCACTACGTGGTGGCTGCCCGCGGGCTCCGGGTTCATGGGGACGTaGAGAGGCCCGTCGAAGCGCATCTGGCAGCTAGACACAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: STTWWLPAGSGFMGT*RGPSKRIWQLDTGV Trigger: CACTCCTGTGTCTAGCTGCCAGATGCGCTTCGACGGGCCTCTGCACGTCCCCATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 90 bp | CAACTGCGATGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGATaGCGGCTTGCGAATGGGGTTGGGCACGGCGAAGGTCTGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QLRCVADLQAREAHG*RLANGVGHGEGLPI Trigger: GATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 90 bp | GGCGAGGGCACCTGCGTGTCAAGCAACTGCGATGCGTGGCCGATCTaGAGGCCCGGGAAGCCCATGGATGCCGGCTTGCGAATGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEGTCVSSNCDAWPI*RPGKPMDAGLRMGL Trigger: CAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 90 bp | CAAGCAACTGCGATGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATaGATGCCGGCTTGCGAATGGGGTTGGGCACGGCGAAGGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QATAMRGRSAGPGSP*MPACEWGWARRRSA Trigger: GGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 90 bp | CCGGATCGTCCCACATCGGGCTATGCTGCACCTGGAAGCTCGGGGTaGTGGGTGTCGGGGGCGAAGAGGGCTTGTAGTAAACCGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PDRPTSGYAAPGSSG*WVSGAKRACSKPTR Trigger: GCGGGTCGGTTTACTACAAGCCCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGACGATCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS GCA 90 bp | ATGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTTaGGAATGGGGTTGGGCACGGCGAAGGTCTGCCCATCCACTACGT | + |
|
Preference number: 5 (lower is better) Translates to: MRGRSAGPGSPWMPA*EWGWARRRSAHPLR Trigger: ACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 90 bp | GGCTCCGGGTTCATGGGGACGTGCAGAGGCCCGTCGAAGCGCATCTaGCAGCTAGACACAGGAGTGCCCGGGGGCGACTGCTTAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGFMGTCRGPSKRI*QLDTGVPGGDCLKE Trigger: CTCCTTTAAGCAGTCGCCCCCGGGCACTCCTGTGTCTAGCTGCCAGATGCGCTTCGACGGGCCTCTGCACGTCCCCATGAACCCGGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 90 bp | GGGTGTCGGGGGCGAAGAGGGCTTGTAGTAAACCGACCCGCTGTGTaGCATCATCTCCTCGGACTGAGGGGGCAGGTGGCTGTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCRGRRGLVVNRPAV*HHLLGLRGQVAVLL Trigger: CAGCAACACAGCCACCTGCCCCCTCAGTCCGAGGAGATGATGCCACACAGCGGGTCGGTTTACTACAAGCCCTCTTCGCCCCCGACACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 90 bp | GATCGTCCCACATCGGGCTATGCTGCACCTGGAAGCTCGGGGTGCTaGGTGTCGGGGGCGAAGAGGGCTTGTAGTAAACCGACCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DRPTSGYAAPGSSGC*VSGAKRACSKPTRC Trigger: ACAGCGGGTCGGTTTACTACAAGCCCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGACGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 90 bp | TCGAAGCGCATCTGGCAGCTAGACACAGGAGTGCCCGGGGGCGACTaGTTAAAGGAGAAGAGTGACAGGCGGGAGACAGGTGTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKRIWQLDTGVPGGD*LKEKSDRRETGVFL Trigger: GAGGAAGACACCTGTCTCCCGCCTGTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCACTCCTGTGTCTAGCTGCCAGATGCGCTTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS TCA 90 bp | GCTAGACACAGGAGTGCCCGGGGGCGACTGCTTAAAGGAGAAGAGTaGCAGGCGGGAGACAGGTGTCTTCCTCTGCTCGATCATATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ARHRSARGRLLKGEE*QAGDRCLPLLDHMR Trigger: ACGCATATGATCGAGCAGAGGAAGACACCTGTCTCCCGCCTGTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCACTCCTGTGTCTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 90 bp | TGTATTCTCCCGAAGAGTGGTAACTGTAGCTCTGAGAAGCGGGGCTaGCTCCTTGAGGCGAGGACCCATACTGCGCCTGAACACAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CILPKSGNCSSEKRG*LLEARTHTAPEHKA Trigger: TGCCTTGTGTTCAGGCGCAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGCTTCTCAGAGCTACAGTTACCACTCTTCGGGAGAATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
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| CDS-3UTR CAA 90 bp | CTGTGTGCAAAGGGTGCGGAGTTCTGGCAGCTTCCCCAACAGTTTAGACAGGTATCCGGACAGGGGCATTaGGTACAAGCAAGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCAKGAEFWQLPQQFRQVSGQGH*VQARWL Trigger: AAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGA...TACCTGTCTAAACTGTTGGGGAAGCTGCCAGAACTCCGCACCCTTTGCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCGGCTTGCGAATGGGGTaGGGCACGGCGAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVCYICLNCGLRMG*GTAKVC Trigger: GCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCC...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS TCA 90 bp | CACGCACGCATTGCAACCTGTGCAAGACCACCCCATTGCAAAAGATaGGTTTACCCTCCACTGGGTTGGACCTGTATGCTAAGCGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HARIATCARPPHCKR*VYPPLGWTCMLSAE Trigger: TTCTGCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCACAGGTTGCAATGCGTGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CCA 90 bp | AATGGAGGACTGCTGTCCGGACAGGGGCATTTGGTACAAGCAAGGTaGCTTGACGTCGTAGCCTGTGCTGTAGTTGTCCATAAAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: NGGLLSGQGHLVQAR*LDVVACAVVVHKGT Trigger: AGTACCTTTATGGACAACTACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGACAGCAGTCCTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACAGCGGGGCTGGCTCCTaGAGGCGAGGACCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCYICLNCNKQAWPNSGAGS*RRGPIL Trigger: CAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGCT...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
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| CDS-3UTR CAA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCGGCTTGCGAATGGGGTaGGGCACGGCGAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KECWAVLQTLCVPFVRIFGLRMG*GTAKVC Trigger: GCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCC...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGGCTTGCGAATGGGGTaGGGCACGGCGAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCVTFVLTATSKHGQTFPGLRMG*GTAKVC Trigger: GCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACGGCTTGCGAATGGGGTaGGGCACGGCGAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCYICLNCNKQAWPNGLRMG*GTAKVC Trigger: GCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCC...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCCCCATGGATGCCGGCTaGCGAATGGGGTTGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: KECWAVLQTLCVPFVRIFPMDAG*RMGLGT Trigger: CGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGG...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTAGCGGGGCTGGCTCCTaGAGGCGAGGACCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSACRLGNSDSFYLWFSGAGS*RRGPIL Trigger: CAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGCT...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
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| CDS-3UTR CAA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGCCCATGGATGCCGGCTaGCGAATGGGGTTGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMPMDAG*RMGLGT Trigger: CGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGG...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACACCCATGGATGCCGGCTaGCGAATGGGGTTGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTPMDAG*RMGLGT Trigger: CGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGG...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGCCCATGGATGCCGGCTaGCGAATGGGGTTGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVPMDAG*RMGLGT Trigger: CGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGG...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCAGGTCCTGGTCGGCTTaGGGCAGGTCAGCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KECWAVLQTLCVPFVRIFRSWSA*GRSAKP Trigger: TGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACCT...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATGGGCAGGTGGCTGTGTaGCTGGTAGTTGTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDGQVAV*LVVVHL Trigger: CAGATGCACAACTACCAGCAACACAGCCACCTGCCC...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGAGGTCCTGGTCGGCTTaGGGCAGGTCAGCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMRSWSA*GRSAKP Trigger: TGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACCT...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS-3UTR CAA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCTCCGGACAGGGGCATTaGGTACAAGCAAGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KECWAVLQTLCVPFVRIFSGQGH*VQARWL Trigger: AAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGA...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTGGGCAGGTGGCTGTGTaGCTGGTAGTTGTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSACRLGNSDSFYLWFGQVAV*LVVVHL Trigger: CAGATGCACAACTACCAGCAACACAGCCACCTGCCC...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCAGTCCAGGCTGGTCATaGCCGGATTGGAATCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: VCVTFVLTATSKHGQTFPSPGWS*PDWNRR Trigger: ACGTCGATTCCAATCCGGCAATGACCAGCCTGGACT...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAGGTCCTGGTCGGCTTaGGGCAGGTCAGCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTRSWSA*GRSAKP Trigger: TGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACCT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGAGGTCCTGGTCGGCTTaGGGCAGGTCAGCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVRSWSA*GRSAKP Trigger: TGGCTTTGCTGACCTGCCCAAAGCCGACCAGGACCT...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCAAAGCCACGCACGCATaGCAACCTGTGCAAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VCVTFVLTATSKHGQTFPKATHA*QPVQDH Trigger: GTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTTT...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCACTCTCTTGGGTTCCTaGAGCCCGTGTCTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KECWAVLQTLCVPFVRIFTLLGS*SPCLSV Trigger: CACAGAGAGACACGGGCTCAAGGAACCCAAGAGAGT...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCTCCGGACAGGGGCATTaGGTACAAGCAAGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVCYICLNCNKQAWPNISSGQGH*VQARWL Trigger: AAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGA...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAGGGCAGGTGGCTGTGTaGCTGGTAGTTGTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTGQVAV*LVVVHL Trigger: CAGATGCACAACTACCAGCAACACAGCCACCTGCCC...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGGGGCAGGTGGCTGTGTaGCTGGTAGTTGTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVGQVAV*LVVVHL Trigger: CAGATGCACAACTACCAGCAACACAGCCACCTGCCC...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGAGTCCAGGCTGGTCATaGCCGGATTGGAATCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMSPGWS*PDWNRR Trigger: ACGTCGATTCCAATCCGGCAATGACCAGCCTGGACT...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCAGTCCAGGCTGGTCATaGCCGGATTGGAATCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: CVCYICLNCNKQAWPNISSPGWS*PDWNRR Trigger: ACGTCGATTCCAATCCGGCAATGACCAGCCTGGACT...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTTTACCCTCCACTGGGTaGGACCTGTATGCTAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSACRLGNSDSFYLWFLPSTG*DLYAKR Trigger: GCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTAA...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTAGCTCTTCCACTCTCTaGGGTTCCTTGAGCCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGSACRLGNSDSFYLWFSSSTL*GSLSPC Trigger: ACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCT...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATCCGGACAGGGGCATTaGGTACAAGCAAGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTSGQGH*VQARWL Trigger: AAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAAGCTCTTCCACTCTCTaGGGTTCCTTGAGCCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTSSSTL*GSLSPC Trigger: ACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCT...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS GCA 90 bp | AGGGCAGCAATGCAGGAGAAGGCAGAAATGTCGATGTTCATATTCTaGAAGTTGGAGGAGAATTCAACAATGGAATCAATCCATTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAAMQEKAEMSMFIF*KLEENSTMESIHSP Trigger: TGGGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCTCCTGCATTGCTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCGAACTGCTGGATATGTaGGGTATCATCTCCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVCYICLNCELLDM*GIISTH Trigger: ATGAGTGGAGATGATACCCAACATATCCAGCAGTTC...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCTGCAAGACCACCCCATaGCAAAAGATGAGTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVTFVLTATSKHGQTFPCKTTP*QKMSLP Trigger: GGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCA...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS CCA 90 bp | AAATGTCGATGTTCATATTCTGCAAGTTGGAGGAGAATTCAACAATaGAATCAATCCATTCCCCAAAGCCACGCACGCATTGCAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KCRCSYSASWRRIQQ*NQSIPQSHARIATC Trigger: ACAGGTTGCAATGCGTGCGTGGCTTTGGGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS CCA 90 bp | CAATGCAGGAGAAGGCAGAAATGTCGATGTTCATATTCTGCAAGTTaGAGGAGAATTCAACAATGGAATCAATCCATTCCCCAAAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QCRRRQKCRCSYSAS*RRIQQWNQSIPQSH Trigger: GTGGCTTTGGGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCTCCTGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTTCTGATAGTCAGGGTTaGCCTGGAACCTGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGSACRLGNSDSFYLWFSDSQG*PGTWNS Trigger: ACTATTCCAGGTTCCAGGCAAACCCTGACTATCAGA...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTGAACTGCTGGATATGTaGGGTATCATCTCCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTLTNKECWAVLQTLCVPELLDM*GIISTH Trigger: ATGAGTGGAGATGATACCCAACATATCCAGCAGTTC...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATTTTCGAACTGCTGGATATGTaGGGTATCATCTCCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KECWAVLQTLCVPFVRIFELLDM*GIISTH Trigger: ATGAGTGGAGATGATACCCAACATATCCAGCAGTTC...GAAAATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGTTACCCTCCACTGGGTaGGACCTGTATGCTAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGLPSTG*DLYAKR Trigger: GCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTAA...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACAAAGCCACGCACGCATaGCAACCTGTGCAAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYKATHA*QPVQDH Trigger: GTGGTCTTGCACAGGTTGCAATGCGTGCGTGGCTTT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACAGCTCTTCCACTCTCTaGGGTTCCTTGAGCCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYSSSTL*GSLSPC Trigger: ACACGGGCTCAAGGAACCCAAGAGAGTGGAAGAGCT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTAGGTCCATGCTAAACTaGACAAACTCTGGAGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLTNKECWAVLQTLCVPRSMLN*TNSGVK Trigger: CTTAACTCCAGAGTTTGTCAAGTTTAGCATGGACCT...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATCTGATAGTCAGGGTTaGCCTGGAACCTGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTSDSQG*PGTWNS Trigger: ACTATTCCAGGTTCCAGGCAAACCCTGACTATCAGA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | TACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTGCAAGACCACCCCATaGCAAAAGATGAGTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: YIQHLQTRNVGRCYKHYVCKTTP*QKMSLP Trigger: GGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCA...CACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCGTGTCCAGGAAAAGTTaGTCAATTATTGCTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCVTFVLTATSKHGQTFPVSRKS*SIIAGG Trigger: ACCACCAGCAATAATTGACAAACTTTTCCTGGACAC...GGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAGCAGTAATTTCAGTGTaGGTGAGGTCCATGCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTAVISV*VRSMLN Trigger: GTTTAGCATGGACCTCACCAACACTGAAATTACTGC...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACAGAACTGCTGGATATGTaGGGTATCATCTCCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTELLDM*GIISTH Trigger: ATGAGTGGAGATGATACCCAACATATCCAGCAGTTC...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACATTTGTCTTAACTGCTTCATATTCTGCAAGTaGGAGGAGAATTCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCVCYICLNCFIFCK*EENSTM Trigger: CATTGTTGAATTCTCCTCCAACTTGCAGAATATGAA...GCAGTTAAGACAAATGTAACACACACACACACACACACACACACACACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACAAAGTTTGTCAATTATaGCTGGTGGTGGTACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCYICLNCNKQAWPNKVCQL*LVVVPS Trigger: ACTTGGTACCACCACCAGCAATAATTGACAAACTTT...GTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACACACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTTGTCAGGATAAAGTTTGTCAATTATaGCTGGTGGTGGTACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KQGMLGGVTNTMCPFCQDKVCQL*LVVVPS Trigger: ACTTGGTACCACCACCAGCAATAATTGACAAACTTT...ATCCTGACAAAAGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCGTGTCCAGGAAAAGTTaGTCAATTATTGCTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVCYICLNCNKQAWPNISVSRKS*SIIAGG Trigger: ACCACCAGCAATAATTGACAAACTTTTCCTGGACAC...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTCTGATAGTCAGGGTTaGCCTGGAACCTGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYSDSQG*PGTWNS Trigger: ACTATTCCAGGTTCCAGGCAAACCCTGACTATCAGA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACTGCAAGACCACCCCATaGCAAAAGATGAGTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYCKTTP*QKMSLP Trigger: GGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCA...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | ACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTGTCCCTTTCATATTCTGCAAGTaGGAGGAGAATTCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: TTLTNKECWAVLQTLCVPFIFCK*EENSTM Trigger: CATTGTTGAATTCTCCTCCAACTTGCAGAATATGAA...AGGGACACATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | GGTACATACAACACTTACAAACAAGGAATGTTGGGCGGTGTTACAAACACTATGTTCAAACCCCCATTATaGAAAGTCACATGGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GTYNTYKQGMLGGVTNTMFKPPL*KVTWSL Trigger: TAAAGACCATGTGACTTTCAATAATGGGGGTTTGAA...CATAGTGTTTGTAACACCGCCCAACATTCCTTGTTTGTAAGTGTTGTATGTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGTTCTGCCTGCAGGTTAGGAAATAGCGACAGTTTTTATTTGTGGTTTTTCAAACCCCCATTATaGAAAGTCACATGGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSGSACRLGNSDSFYLWFFKPPL*KVTWSL Trigger: TAAAGACCATGTGACTTTCAATAATGGGGGTTTGAA...AAACCACAAATAAAAACTGTCGCTATTTCCTAACCTGCAGGCAGAACCTGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTTACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCTTCAAACCCCCATTATaGAAAGTCACATGGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CVCYICLNCNKQAWPNISFKPPL*KVTWSL Trigger: TAAAGACCATGTGACTTTCAATAATGGGGGTTTGAA...GGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTAACACACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCAGTGACTCATCTCATGTGCCGTACTAGAAATATACAAAGAAAATACAGGTCCATGCTAAACTaGACAAACTCTGGAGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KKAVTHLMCRTRNIQRKYRSMLN*TNSGVK Trigger: CTTAACTCCAGAGTTTGTCAAGTTTAGCATGGACCT...GTATTTTCTTTGTATATTTCTAGTACGGCACATGAGATGAGTCACTGCCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TACATTTGTCTTAACTGCAACAAGCAAGCATGGCCAAACATTTCCCATCATACATTCATATTCTGCAAGTaGGAGGAGAATTCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: YICLNCNKQAWPNISHHTFIFCK*EENSTM Trigger: CATTGTTGAATTCTCCTCCAACTTGCAGAATATGAA...TGTATGATGGGAAATGTTTGGCCATGCTTGCTTGTTGCAGTTAAGACAAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTATCAACATCAACGGTACATACAACACTTACAAACAAGGAATGTTGGGAAAGTTTGTCAATTATaGCTGGTGGTGGTACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FFYQHQRYIQHLQTRNVGKVCQL*LVVVPS Trigger: ACTTGGTACCACCACCAGCAATAATTGACAAACTTT...CCCAACATTCCTTGTTTGTAAGTGTTGTATGTACCGTTGATGTTGATAAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
||
| CDS GCA 72 bp | CGGGACGGCGGCGAGGGCACCTGCGTGTCAAGCAACTaGGATGCGTGGCCGATCTGCAGGCCCGGGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RDGGEGTCVSSN*DAWPICRPGKP Trigger: GGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCGTCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS GCA 72 bp | GCCGGCTTGCGAATGGGGTTGGGCACGGCGAAGGTCTaGCCATCCACTACGTGGTGGCTGCCCGCGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGLRMGLGTAKV*PSTTWWLPAGS Trigger: GGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS CCA 72 bp | GGGTTGGGCACGGCGAAGGTCTGCCCATCCACTACGTaGTGGCTGCCCGCGGGCTCCGGGTTCATGGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GLGTAKVCPSTT*WLPAGSGFMGT Trigger: CGTCCCCATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS GCA 72 bp | CGGCGGCGAGGGCACCTGCGTGTCAAGCAACTGCGATaGGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRGHLRVKQLR*VADLQAREAHG Trigger: TCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
||
| CDS CCA 72 bp | TTGGGCACGGCGAAGGTCTGCCCATCCACTACGTGGTaGCTGCCCGCGGGCTCCGGGTTCATGGGGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGTAKVCPSTTW*LPAGSGFMGTC Trigger: GCACGTCCCCATGAACCCGGAGCCCGCGGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | GCGATGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATaGATGCCGGCTTGCGAATGGGGTTGGGCACGGCGA | + |
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Preference number: 6 (lower is better) Translates to: AMRGRSAGPGSP*MPACEWGWARR Trigger: TCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 72 bp | TGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGATaGCGGCTTGCGAATGGGGTTGGGCACGGCGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: CVADLQAREAHG*RLANGVGHGEG Trigger: ACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | GAGCCCGGATCGTCCCACATCGGGCTATGCTGCACCTaGAAGCTCGGGGTGCTGGGTGTCGGGGGCGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: EPGSSHIGLCCT*KLGVLGVGGEE Trigger: CTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGGACGATCCGGGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | GGCGAGGGCACCTGCGTGTCAAGCAACTGCGATGCGTaGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: GEGTCVSSNCDA*PICRPGKPMDA Trigger: GGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGTGCCCTCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CAA 72 bp | CCGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTaGCGAATGGGGTTGGGCACGGCGAAGGTCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PICRPGKPMDAG*RMGLGTAKVCP Trigger: TGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CAA 90 bp | ATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTTGCGAATGGGGTaGGGCACGGCGAAGGTCTGCCCATCCACTACGTGGTGGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ICRPGKPMDAGLRMG*GTAKVCPSTTWWLP Trigger: GGGCAGCCACCACGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CAA 90 bp | GATGCGTGGCCGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTaGCGAATGGGGTTGGGCACGGCGAAGGTCTGCCCATCCACTACG | + |
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Preference number: 6 (lower is better) Translates to: DAWPICRPGKPMDAG*RMGLGTAKVCPSTT Trigger: CGTAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 72 bp | CGATCTGCAGGCCCGGGAAGCCCATGGATGCCGGCTTaGGAATGGGGTTGGGCACGGCGAAGGTCTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RSAGPGSPWMPA*EWGWARRRSAH Trigger: ATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | TTCATGGGGACGTGCAGAGGCCCGTCGAAGCGCATCTaGCAGCTAGACACAGGAGTGCCCGGGGGCGACTGC | + |
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Preference number: 6 (lower is better) Translates to: FMGTCRGPSKRI*QLDTGVPGGDC Trigger: GCAGTCGCCCCCGGGCACTCCTGTGTCTAGCTGCCAGATGCGCTTCGACGGGCCTCTGCACGTCCCCATGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | GCAGGCCCGGGAAGCCCATGGATGCCGGCTTGCGAATaGGGTTGGGCACGGCGAAGGTCTGCCCATCCACTA | + |
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Preference number: 6 (lower is better) Translates to: AGPGSPWMPACE*GWARRRSAHPL Trigger: TAGTGGATGGGCAGACCTTCGCCGTGCCCAACCCCATTCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 72 bp | ACCTGCGTGTCAAGCAACTGCGATGCGTGGCCGATCTaGAGGCCCGGGAAGCCCATGGATGCCGGCTTGCGA | + |
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Preference number: 6 (lower is better) Translates to: TCVSSNCDAWPI*RPGKPMDAGLR Trigger: TCGCAAGCCGGCATCCATGGGCTTCCCGGGCCTGCAGATCGGCCACGCATCGCAGTTGCTTGACACGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 72 bp | CCCACATCGGGCTATGCTGCACCTGGAAGCTCGGGGTaGTGGGTGTCGGGGGCGAAGAGGGCTTGTAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: PTSGYAAPGSSG*WVSGAKRACSK Trigger: TTTACTACAAGCCCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCCAGGTGCAGCATAGCCCGATGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | ACATCGGGCTATGCTGCACCTGGAAGCTCGGGGTGCTaGGTGTCGGGGGCGAAGAGGGCTTGTAGTAAACCG | + |
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Preference number: 6 (lower is better) Translates to: TSGYAAPGSSGC*VSGAKRACSKP Trigger: CGGTTTACTACAAGCCCTCTTCGCCCCCGACACCCAGCACCCCGAGCTTCCAGGTGCAGCATAGCCCGATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS GCA 72 bp | ATCTGGCAGCTAGACACAGGAGTGCCCGGGGGCGACTaGTTAAAGGAGAAGAGTGACAGGCGGGAGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: IWQLDTGVPGGD*LKEKSDRRETG Trigger: ACCTGTCTCCCGCCTGTCACTCTTCTCCTTTAAGCAGTCGCCCCCGGGCACTCCTGTGTCTAGCTGCCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | CCGAAGAGTGGTAACTGTAGCTCTGAGAAGCGGGGCTaGCTCCTTGAGGCGAGGACCCATACTGCGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PKSGNCSSEKRG*LLEARTHTAPE Trigger: TTCAGGCGCAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGCTTCTCAGAGCTACAGTTACCACTCTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
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| CDS CAA 72 bp | GTGGTAACTGTAGCTCTGAGAAGCGGGGCTGGCTCCTaGAGGCGAGGACCCATACTGCGCCTGAACACAAGG | + |
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Preference number: 6 (lower is better) Translates to: VVTVALRSGAGS*RRGPILRLNTR Trigger: CCTTGTGTTCAGGCGCAGTATGGGTCCTCGCCTCAAGGAGCCAGCCCCGCTTCTCAGAGCTACAGTTACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028166.9 ENSMUST00000112629.8 |
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| CDS GCA 72 bp | GTTTGCCTGGAACCTGGAATAGTCCAGGCTGGTCATTaGCGGATTGGAATCGACGTGGGCTCTGACGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VCLEPGIVQAGH*RIGIDVGSDEG Trigger: GCCCTCGTCAGAGCCCACGTCGATTCCAATCCGGCAATGACCAGCCTGGACTATTCCAGGTTCCAGGCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CCA 72 bp | CTGCTGTCCGGACAGGGGCATTTGGTACAAGCAAGGTaGCTTGACGTCGTAGCCTGTGCTGTAGTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLSGQGHLVQAR*LDVVACAVVVH Trigger: ATGGACAACTACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGACAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CAA 72 bp | TACCTTAATGGAGGACTGCTGTCCGGACAGGGGCATTaGGTACAAGCAAGGTGGCTTGACGTCGTAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: YLNGGLLSGQGH*VQARWLDVVAC Trigger: ACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS CAA 72 bp | CCACGCACGCATTGCAACCTGTGCAAGACCACCCCATaGCAAAAGATGAGTTTACCCTCCACTGGGTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PRTHCNLCKTTP*QKMSLPSTGLD Trigger: GTCCAACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCACAGGTTGCAATGCGTGCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CAA 90 bp | AATGTCTTCTACCTTAATGGAGGACTGCTGTCCGGACAGGGGCATTaGGTACAAGCAAGGTGGCTTGACGTCGTAGCCTGTGCTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: NVFYLNGGLLSGQGH*VQARWLDVVACAVV Trigger: AACTACAGCACAGGCTACGACGTCAAGCCACCTTGCTTGTACCAAATGCCCCTGTCCGGACAGCAGTCCTCCATTAAGGTAGAAGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 ENSMUST00000183542.8 |
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| CDS TCA 72 bp | ATTGCAACCTGTGCAAGACCACCCCATTGCAAAAGATaGGTTTACCCTCCACTGGGTTGGACCTGTATGCTA | + |
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Preference number: 6 (lower is better) Translates to: IATCARPPHCKR*VYPPLGWTCML Trigger: TAGCATACAGGTCCAACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGGTGGTCTTGCACAGGTTGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CAA 72 bp | ACCCCATTGCAAAAGATGAGTTTACCCTCCACTGGGTaGGACCTGTATGCTAAGCGCAGAACAAATAATTCT | + |
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Preference number: 6 (lower is better) Translates to: TPLQKMSLPSTG*DLYAKRRTNNS Trigger: AGAATTATTTGTTCTGCGCTTAGCATACAGGTCCAACCCAGTGGAGGGTAAACTCATCTTTTGCAATGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CAA 90 bp | GCAATGCAGGAGAAGGCAGAAATGTCGATGTTCATATTCTGCAAGTaGGAGGAGAATTCAACAATGGAATCAATCCATTCCCCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AMQEKAEMSMFIFCK*EENSTMESIHSPKP Trigger: TGGCTTTGGGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCTCCTGCATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CCA 72 bp | TGTTCATATTCTGCAAGTTGGAGGAGAATTCAACAATaGAATCAATCCATTCCCCAAAGCCACGCACGCATT | + |
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Preference number: 6 (lower is better) Translates to: CSYSASWRRIQQ*NQSIPQSHARI Trigger: AATGCGTGCGTGGCTTTGGGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CCA 72 bp | AGAAGGCAGAAATGTCGATGTTCATATTCTGCAAGTTaGAGGAGAATTCAACAATGGAATCAATCCATTCCC | + |
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Preference number: 6 (lower is better) Translates to: RRQKCRCSYSAS*RRIQQWNQSIP Trigger: GGGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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| CDS CAA 72 bp | GAGAAGGCAGAAATGTCGATGTTCATATTCTGCAAGTaGGAGGAGAATTCAACAATGGAATCAATCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: EKAEMSMFIFCK*EENSTMESIHS Trigger: GGAATGGATTGATTCCATTGTTGAATTCTCCTCCAACTTGCAGAATATGAACATCGACATTTCTGCCTTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028166.9 ENSMUST00000112627.2 ENSMUST00000112629.8 |
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