Pregenerated sensors for NR2F6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002393Ensembl transcript IDs: ENSMUST00000002466.9, ENSMUST00000124732.2, ENSMUST00000137058.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCCTaGCCCATAGTACTCCTGCCTAGCTGCAGTGGCCTTTCCAGATAC | + |
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Preference number: 1 (lower is better) Translates to: HPMVPSVDHVSRGSS*PIVLLPSCSGLSRY Trigger: GTATCTGGAAAGGCCACTGCAGCTAGGCAGGAGTACTATGGGCCAGGAGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR GCA 90 bp | CTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATaGTGGCTCCAGACTGTTGAAGGTCTGCCAGGACAAGGCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LQWPFQIPMTPEASA*WLQTVEGLPGQGLG Trigger: TCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCCTGAGGCATCAGCATGCTaGCTCCAGACTGTTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: VFIIPWCPPWTMYPGDPPEASAC*LQTVEG Trigger: ACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTC...AGGAGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTTGCCAGGACAAGGCCTaGGAGATCCAAATCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PFQIPMTPEASACWLQTVCQDKA*EIQIFL Trigger: CAAAAAGATTTGGATCTCCCAGGCCTTGTCCTGGCA...AACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR TCA 72 bp | CTCCTGCCTAGCTGCAGTGGCCTTTCCAGATACCCATaGCACCAGAGGCATCAGCATGCTGGCTCCAGACTG | + |
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Preference number: 3 (lower is better) Translates to: LLPSCSGLSRYP*HQRHQHAGSRL Trigger: CAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGCTAGGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR TCA 72 bp | GACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTaGAGGTCTGCCAGGACAAGGCCTGGGAGATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: DTRGISMLAPDC*RSARTRPGRSK Trigger: TTTGGATCTCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR GCA 72 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATaGTGGCTCCAGACTGTTGAAGGTCTGCCAGGACAA | + |
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Preference number: 3 (lower is better) Translates to: PFQIPMTPEASA*WLQTVEGLPGQ Trigger: TTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR-3UTR CAA 90 bp | CCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTGCTGGCTCCAGACTGTaGAAGGTCTGCCAGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: PLLLARFSSSHGALRGPCAGSRL*KVCQDK Trigger: CTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGC...ACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR GCA 72 bp | AGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTCTaGCAGGACAAGGCCTGGGAGATCCAAATCTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: RHQHAGSRLLKV*QDKAWEIQIFL Trigger: CAAAAAGATTTGGATCTCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| 3UTR CCA 72 bp | AATACCTTTATTATTGGCCAGGTTTTCATCATCCCATaGTGCCCTCCGTGGACCATGTATCCAGGGGATCCT | + |
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Preference number: 3 (lower is better) Translates to: NTFIIGQVFIIP*CPPWTMYPGDP Trigger: AGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGTCCCCACAAGGCCCCAGTTTCCATGTATGTCCTGGAAGGTGACTATCAGCAGCGGTGCCGTATaGAGCGGCAGCGCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRVPTRPQFPCMSWKVTISSGAV*SGSAAC Trigger: GCAGGCGGCGCTGCCGCTGCATACGGCACCGCTGCT...GATAGTCACCTTCCAGGACATACATGGAAACTGGGGCCTTGTGGGGACCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | CAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCCCGCTCGGCTGCCATaGGCGCGGCATGCAACCCCG | + |
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Preference number: 4 (lower is better) Translates to: QVFIIPWCPPWTMYPGDPPARLP*ARHATP Trigger: CGGGGTTGCATGCCGCGCCCATGGCAGCCGAGCGGG...AGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | CAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTCTGCCAGGACAAGGCCCACAGCACGCAGGGCTaGCAGCCGCAGCAGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: QRHQHAGSRLLKVCQDKAHSTQG*QPQQQT Trigger: CGTCTGCTGCTGCGGCTGCCAGCCCTGCGTGCTGTG...GGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | CAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCACGCACCTGGTCCATaGAGGCCACGGCCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QVFIIPWCPPWTMYPGDPHAPGP*RPRPAR Trigger: CCGAGCGGGCCGTGGCCTTCATGGACCAGGTGCGTG...AGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | CAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTCTGCCAGGACAAGGCCACCACGCAGTCCACCTaGAACCCCGGACGCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: QRHQHAGSRLLKVCQDKATTQST*NPGRSS Trigger: CGAGGAGCGTCCGGGGTTGCAGGTGGACTGCGTGGT...GGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | GCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTAGAGCTCACTCCAGCTaGGCCGCAGCAGCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: AAVAFPDTHDTRGISMLARAHSS*AAAAPP Trigger: AGGTGGCGCTGCTGCGGCTCAGCTGGAGTGAGCTCT...AGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | GTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCCTGCTGCACGGCCTCCTTaGGCATGCCCACCCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VFIIPWCPPWTMYPGDPPAARPP*ACPPGS Trigger: GCTTCCGGGTGGGCATGCGCAAGGAGGCCGTGCAGC...AGGAGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTAGCGGCAGCGCCGCCTaGGCCGCGTTCAGCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: PFQIPMTPEASACWLQTVSGSAA*AAFSTK Trigger: CTTCGTGCTGAACGCGGCGCAGGCGGCGCTGCCGCT...AACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTCACGGCCCGCTCGGCTaGCATGGGCGCGGCATGCAA | + |
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Preference number: 4 (lower is better) Translates to: PFQIPMTPEASACWLQTVHGPLG*HGRGMQ Trigger: TTGCATGCCGCGCCCATGGCAGCCGAGCGGGCCGTG...AACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | CAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTCTGCCAGGACAAGGCCGCGCTGGGGCTGCGATaGGTACTGGGCACGCACATA | + |
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Preference number: 4 (lower is better) Translates to: QRHQHAGSRLLKVCQDKAALGLR*VLGTHI Trigger: TATGTGCGTGCCCAGTACCCATCGCAGCCCCAGCGC...GGCCTTGTCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | GTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCCTCTGGGAGATGAGGGATaGGGGCACAGCACGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VFIIPWCPPWTMYPGDPPLGDEG*GHSTQG Trigger: GCCCTGCGTGCTGTGCCCGCATCCCTCATCTCCCAG...AGGAGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | AGGGGATCCTCCTGGCCCATAGTACTCCTGCCTAGCTGCAGTGGCCTTTCCAGATTGTCCACCTGCTCCTaGAAGGCACGCACCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RGSSWPIVLLPSCSGLSRLSTCS*KARTWS Trigger: GGACCAGGTGCGTGCCTTCCAGGAGCAGGTGGACAA...TCTGGAAAGGCCACTGCAGCTAGGCAGGAGTACTATGGGCCAGGAGGATCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | TGCCTAGCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGACCGGCAGGTGTAGCTaGGATTGCGGCGGATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLAAVAFPDTHDTRGISMTGRCS*DCGGCC Trigger: GCAGCATCCGCCGCAATCTCAGCTACACCTGCCGGT...CATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGCTAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | CCCAGGGTCCCCACAAGGCCCCAGTTTCCATGTATGTCCTGGAAGGTGACTATCAGAAGAGCTGGGAGATaGGGGATGCGGGCACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PRVPTRPQFPCMSWKVTIRRAGR*GMRAQH Trigger: GTGCTGTGCCCGCATCCCTCATCTCCCAGCTCTTCT...GATAGTCACCTTCCAGGACATACATGGAAACTGGGGCCTTGTGGGGACCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTCCAAAGCGCTGGGGCTaGGATGGGTACTGGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: PFQIPMTPEASACWLQTVPKRWG*DGYWAR Trigger: GCGTGCCCAGTACCCATCGCAGCCCCAGCGCTTTGG...AACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | GCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTACCTGTGCCTTCTCCTaGAGGCTCTCCACATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AAVAFPDTHDTRGISMLATCAFS*RLSTWA Trigger: AGCCCATGTGGAGAGCCTGCAGGAGAAGGCACAGGT...AGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | CAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTTTGAGCCGACAGTACTaGCACTGGTTCCGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QVFIIPWCPPWTMYPGDPLSRQY*HWFRWC Trigger: GCACCACCGGAACCAGTGTCAGTACTGTCGGCTCAA...AGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTCACGCACATACTCGGTaGGGGCCACCTGTGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PFQIPMTPEASACWLQTVHAHTR*GPPVPS Trigger: AGAAGGCACAGGTGGCCCTCACCGAGTATGTGCGTG...AACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | TTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAACGGCCTCCTTGCGCATaGCCACCCGGAAGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: FQIPMTPEASACWLQTVERPPCA*PPGSTS Trigger: AGAAGTGCTTCCGGGTGGGCATGCGCAAGGAGGCCG...TTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | GTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCTCCTTGCAGGCTCTCCACATaGGCTGGGTCAGAAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VFIIPWCPPWTMYPGDPPCRLST*AGSERP Trigger: TGGCCTTTCTGACCCAGCCCATGTGGAGAGCCTGCA...AGGAGGATCCCCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | CCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGGCTGCGATGGGTACTaGGCACGCACATACTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: PFQIPMTPEASACWLQTVGCDGY*ARTYSV Trigger: CACCGAGTATGTGCGTGCCCAGTACCCATCGCAGCC...AACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CCA 90 bp | TGCCTAGCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCGCATGAAGAAGAGCTaGGAGATGAGGGATGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: CLAAVAFPDTHDTRGISMRMKKS*EMRDAG Trigger: GCCCGCATCCCTCATCTCCCAGCTCTTCTTCATGCG...CATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGCTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | TACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATAGAGCGCGATGGCCTTaGGGCAGCCGTACTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: YLYYWPGFHHPMVPSVDHRARWP*GSRTPQ Trigger: CTGCGGAGTACGGCTGCCTCAAGGCCATCGCGCTCT...ATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | TTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGCTGAACAGCAGGCGTaGCGCCAACTCGCACACGTT | + |
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Preference number: 4 (lower is better) Translates to: FQIPMTPEASACWLQTVEAEQQA*RQLAHV Trigger: AACGTGTGCGAGTTGGCGGCACGCCTGCTGTTCAGC...TTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | GGGAATACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGCCCAGCTTGTCCACCTaGTCCTGGAAGGCACGCACC | + |
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Preference number: 4 (lower is better) Translates to: GNTFIIGQVFIIPWCPPWPSLST*SWKART Trigger: GGTGCGTGCCTTCCAGGAGCAGGTGGACAAGCTGGG...CCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR GCA 90 bp | TACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATTCCGCAGCATCCACCTaGAGGCGGCCCAGCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: YLYYWPGFHHPMVPSVDHSAAST*RRPSLS Trigger: GGACAAGCTGGGCCGCCTGCAGGTGGATGCTGCGGA...ATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR TCA 90 bp | TTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAACCCGGAAGCACTTCTTaGGCCGACAGTACTGACACT | + |
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Preference number: 4 (lower is better) Translates to: FQIPMTPEASACWLQTVEPGSTS*ADSTDT Trigger: AGTGTCAGTACTGTCGGCTCAAGAAGTGCTTCCGGG...TTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS GCA 90 bp | CGCCCGGGGGACTGCAGGCCGCTGGACCGGGGAGCGCATGCGGGATaGGGCCTCGCTGCACGGCCTCCTTGCGCATGCCCACCCGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RPGDCRPLDRGAHAG*GLAARPPCACPPGS Trigger: GCTTCCGGGTGGGCATGCGCAAGGAGGCCGTGCAGCGAGGCCGCATCCCGCATGCGCTCCCCGGTCCAGCGGCCTGCAGTCCCCCGGGCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS CCA 90 bp | CCACCTGCAACCCCGGACGCTCCTCGTCGCCCGGCTCCGCGTCGCTaGTCGCCCCGGGAGGTGACGCCGAATCGTCCTCGGTCGCGCGTG | + |
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Preference number: 5 (lower is better) Translates to: PPATPDAPRRPAPRR*SPREVTPNRPRSRV Trigger: CACGCGCGACCGAGGACGATTCGGCGTCACCTCCCGGGGCGACCAGCGACGCGGAGCCGGGCGACGAGGAGCGTCCGGGGTTGCAGGTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS CCA 90 bp | CGTGAAAGGTTCGACGCCCGTCGCGCCCGGGGGACTGCAGGCCGCTaGACCGGGGAGCGCATGCGGGATGCGGCCTCGCTGCACGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RERFDARRARGTAGR*TGERMRDAASLHGL Trigger: GAGGCCGTGCAGCGAGGCCGCATCCCGCATGCGCTCCCCGGTCCAGCGGCCTGCAGTCCCCCGGGCGCGACGGGCGTCGAACCTTTCACG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS TCA 90 bp | CAGCACGCAGCAGCTGCGCAATCAGCTCGGACACTGGCGGCCCCGTaGAAGGTTCGACGCCCGTCGCGCCCGGGGGACTGCAGGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: QHAAAAQSARTLAAP*KVRRPSRPGDCRPL Trigger: CAGCGGCCTGCAGTCCCCCGGGCGCGACGGGCGTCGAACCTTTCACGGGGCCGCCAGTGTCCGAGCTGATTGCGCAGCTGCTGCGTGCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS CCA 90 bp | GGCTGGCAGCCGCAGCAGCAGACGCCCAAAGCGCTGGGGCTGCGATaGGTACTGGGCACGCACATACTCGGTGAGGGCCACCTGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GWQPQQQTPKALGLR*VLGTHILGEGHLCL Trigger: AAGGCACAGGTGGCCCTCACCGAGTATGTGCGTGCCCAGTACCCATCGCAGCCCCAGCGCTTTGGGCGTCTGCTGCTGCGGCTGCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS CCA 90 bp | AGCCGCAGCAGCAGACGCCCAAAGCGCTGGGGCTGCGATGGGTACTaGGCACGCACATACTCGGTGAGGGCCACCTGTGCCTTCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SRSSRRPKRWGCDGY*ARTYSVRATCAFSC Trigger: GCAGGAGAAGGCACAGGTGGCCCTCACCGAGTATGTGCGTGCCCAGTACCCATCGCAGCCCCAGCGCTTTGGGCGTCTGCTGCTGCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CAA 90 bp | TGCCTAGCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCGCTGCACGGCCTCCTaGCGCATGCCCACCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CLAAVAFPDTHDTRGISMRCTAS*RMPTRK Trigger: CTTCCGGGTGGGCATGCGCAAGGAGGCCGTGCAGCG...CATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGCTAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CAA 90 bp | GCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTAAGAGCGCGATGGCCTaGAGGCAGCCGTACTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: AAVAFPDTHDTRGISMLAKSAMA*RQPYSA Trigger: TGCGGAGTACGGCTGCCTCAAGGCCATCGCGCTCTT...AGCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTCCCCACAAGGCCCCAGTTTCCATGTATGTCCTGGAAGGTGACTATCGTCTCGATGGGTGTCTaGCCCACCAGGCGCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: PRVPTRPQFPCMSWKVTIVSMGV*PTRRMK Trigger: CTTCATGCGCCTGGTGGGCAAGACACCCATCGAGAC...GATAGTCACCTTCCAGGACATACATGGAAACTGGGGCCTTGTGGGGACCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS-3UTR CAA 90 bp | CCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTGCCAACTCGCACACGTaGTCGATGCCCAGTACAGCG | + |
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Preference number: 5 (lower is better) Translates to: PLLLARFSSSHGALRGPCANSHT*SMPSTA Trigger: CGCTGTACTGGGCATCGACAACGTGTGCGAGTTGGC...ACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS CCA 72 bp | TTCGACGCCCGTCGCGCCCGGGGGACTGCAGGCCGCTaGACCGGGGAGCGCATGCGGGATGCGGCCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FDARRARGTAGR*TGERMRDAASL Trigger: CAGCGAGGCCGCATCCCGCATGCGCTCCCCGGTCCAGCGGCCTGCAGTCCCCCGGGCGCGACGGGCGTCGAA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS GCA 72 bp | GACTGCAGGCCGCTGGACCGGGGAGCGCATGCGGGATaGGGCCTCGCTGCACGGCCTCCTTGCGCATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: DCRPLDRGAHAG*GLAARPPCACP Trigger: TGGGCATGCGCAAGGAGGCCGTGCAGCGAGGCCGCATCCCGCATGCGCTCCCCGGTCCAGCGGCCTGCAGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS GCA 72 bp | GCCAGCAGCGGTGCCGTATGCAGCGGCAGCGCCGCCTaGGCCGCGTTCAGCACGAAGAGCTCACTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASSGAVCSGSAA*AAFSTKSSLQL Trigger: CAGCTGGAGTGAGCTCTTCGTGCTGAACGCGGCGCAGGCGGCGCTGCCGCTGCATACGGCACCGCTGCTGGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS CCA 72 bp | CTCAGCACGCAGCAGCTGCGCAATCAGCTCGGACACTaGCGGCCCCGTGAAAGGTTCGACGCCCGTCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LSTQQLRNQLGH*RPRERFDARRA Trigger: GGCGCGACGGGCGTCGAACCTTTCACGGGGCCGCCAGTGTCCGAGCTGATTGCGCAGCTGCTGCGTGCTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS CAA 90 bp | CACTCGACCGTGCTGAACAGCAGGCGTGCCGCCAACTCGCACACGTaGTCGATGCCCAGTACAGCGCCGCCGCCACCAAAGCGTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: HSTVLNSRRAANSHT*SMPSTAPPPPKRPA Trigger: GGCCGGACGCTTTGGTGGCGGCGGCGCTGTACTGGGCATCGACAACGTGTGCGAGTTGGCGGCACGCCTGCTGTTCAGCACGGTCGAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS GCA 72 bp | ACAGCAGGCGTGCCGCCAACTCGCACACGTTGTCGATaGCCAGTACAGCGCCGCCGCCACCAAAGCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: TAGVPPTRTRCR*PVQRRRHQSVR Trigger: CCGGACGCTTTGGTGGCGGCGGCGCTGTACTGGGCATCGACAACGTGTGCGAGTTGGCGGCACGCCTGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS CCA 72 bp | CCGCAGCAGCAGACGCCCAAAGCGCTGGGGCTGCGATaGGTACTGGGCACGCACATACTCGGTGAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PQQQTPKALGLR*VLGTHILGEGH Trigger: GTGGCCCTCACCGAGTATGTGCGTGCCCAGTACCCATCGCAGCCCCAGCGCTTTGGGCGTCTGCTGCTGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS CAA 90 bp | GGGTCAGAAAGGCCACAGGCATCAGGCGTGAAGAGCGCGATGGCCTaGAGGCAGCCGTACTCCGCAGCATCCACCTGCAGGCGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSERPQASGVKSAMA*RQPYSAASTCRRPS Trigger: GCTGGGCCGCCTGCAGGTGGATGCTGCGGAGTACGGCTGCCTCAAGGCCATCGCGCTCTTCACGCCTGATGCCTGTGGCCTTTCTGACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS CCA 72 bp | AGCAGACGCCCAAAGCGCTGGGGCTGCGATGGGTACTaGGCACGCACATACTCGGTGAGGGCCACCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRRPKRWGCDGY*ARTYSVRATCA Trigger: GGCACAGGTGGCCCTCACCGAGTATGTGCGTGCCCAGTACCCATCGCAGCCCCAGCGCTTTGGGCGTCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS CAA 72 bp | GTGCTGAACAGCAGGCGTGCCGCCAACTCGCACACGTaGTCGATGCCCAGTACAGCGCCGCCGCCACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VLNSRRAANSHT*SMPSTAPPPPK Trigger: CTTTGGTGGCGGCGGCGCTGTACTGGGCATCGACAACGTGTGCGAGTTGGCGGCACGCCTGCTGTTCAGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002466.9 ENSMUST00000124732.2 ENSMUST00000137058.2 |
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| CDS CAA 72 bp | AGGCCACAGGCATCAGGCGTGAAGAGCGCGATGGCCTaGAGGCAGCCGTACTCCGCAGCATCCACCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPQASGVKSAMA*RQPYSAASTCR Trigger: CCTGCAGGTGGATGCTGCGGAGTACGGCTGCCTCAAGGCCATCGCGCTCTTCACGCCTGATGCCTGTGGCCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS GCA 72 bp | CGCACATACTCGGTGAGGGCCACCTGTGCCTTCTCCTaGAGGCTCTCCACATGGGCTGGGTCAGAAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RTYSVRATCAFS*RLSTWAGSERP Trigger: TGGCCTTTCTGACCCAGCCCATGTGGAGAGCCTGCAGGAGAAGGCACAGGTGGCCCTCACCGAGTATGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002466.9 |
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| CDS TCA 72 bp | CCTGCAAACCCCTGGGAAATACCAGTGGGGGATCCCTaGCCGGCAGGTGTAGCTGAGATTGCGGCGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PANPWEIPVGDP*PAGVAEIAADA Trigger: AGCATCCGCCGCAATCTCAGCTACACCTGCCGGTCAGGGATCCCCCACTGGTATTTCCCAGGGGTTTGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137058.2 |
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| CDS CCA 72 bp | GGTTCCGGTGGTGCTGATCAATCTGACAGTCACGGTTaGACCTGGAGACACAGGCCAGGGTTCCCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: GSGGADQSDSHG*TWRHRPGFPLM Trigger: CATCAGTGGGAACCCTGGCCTGTGTCTCCAGGTCCAACCGTGACTGTCAGATTGATCAGCACCACCGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124732.2 ENSMUST00000137058.2 |
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