Pregenerated sensors for NR2F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069171Ensembl transcript IDs: ENSMUST00000091458.13, ENSMUST00000125176.3, ENSMUST00000150498.8, ENSMUST00000224798.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTGGGCTGCTCTTGTTCCCAGCCCTCCTCCCGTCTGCCTGGCCTaGCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: EWAALVPSPPPVCLA*LVHHTSIPKGFLVL Trigger: AAGGACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACGGGAGGAGGGCTGGGAACAAGAGCAGCCCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR GCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTaGATTCCTGCAGAGTGGGCTGCTCTTGTTCCCAGCCCTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: QILNESPFLLVCSSG*IPAEWAALVPSPPP Trigger: GGGAGGAGGGCTGGGAACAAGAGCAGCCCACTCTGCAGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCTCCTGCAGAGTGGGCTaGTCTTGTTCCCAGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TDQILNESPFLLVCSSGCSCRVG*SCSQPS Trigger: GGAGGGCTGGGAACAAGAGCAGCCCACTCTGCAGGA...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR GCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAAGCCCTCCTCCCGTCTaGCTGGCCTGCCTGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKSPPPV*LACLVH Trigger: ATGGACCAGGCAGGCCAGGCAGACGGGAGGAGGGCT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR GCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAACCCGTCTGCCTGGCCTaGCTGGTCCATCATACCAGC | + |
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Preference number: 2 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKPVCLA*LVHHTS Trigger: GCTGGTATGATGGACCAGGCAGGCCAGGCAGACGGG...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR GCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGTCCTGCAGAGTGGGCTaGTCTTGTTCCCAGCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ITMFSVCFYIGFSPLPYESCRVG*SCSQPS Trigger: GGAGGGCTGGGAACAAGAGCAGCCCACTCTGCAGGA...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR CCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGTGCATTCCTGCAGAGTaGGCTGCTCTTGTTCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ITMFSVCFYIGFSPLPYECIPAE*AALVPS Trigger: GCTGGGAACAAGAGCAGCCCACTCTGCAGGAATGCA...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR GCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAACTCAGGTTGCATTCCTaGAGAGTGGGCTGCTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKLRLHS*RVGCSC Trigger: ACAAGAGCAGCCCACTCTGCAGGAATGCAACCTGAG...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR CCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAAGTCTCCTTTTCTCCTaGTTTGCAGCTCAGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKSLLFS*FAAQVA Trigger: TGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR GCA 72 bp | GGTTTGCAGCTCAGGTTGCATTCCTGCAGAGTGGGCTaGTCTTGTTCCCAGCCCTCCTCCCGTCTGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLQLRLHSCRVG*SCSQPSSRLPG Trigger: GCCAGGCAGACGGGAGGAGGGCTGGGAACAAGAGCAGCCCACTCTGCAGGAATGCAACCTGAGCTGCAAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCTCCCGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGAGTCAGGGAGCAGGATaGGGTGGGAAACACCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: PSSRLPGLPGPSYQHPQRSQGAG*GGKHPK Trigger: CTTTGGGTGTTTCCCACCCAATCCTGCTCCCTGACT...CCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACGGGAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR CCA 72 bp | CTCCTGGTTTGCAGCTCAGGTTGCATTCCTGCAGAGTaGGCTGCTCTTGTTCCCAGCCCTCCTCCCGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LLVCSSGCIPAE*AALVPSPPPVC Trigger: GCAGACGGGAGGAGGGCTGGGAACAAGAGCAGCCCACTCTGCAGGAATGCAACCTGAGCTGCAAACCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| 3UTR-3UTR CAA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTCAGAGTGGGCTGCTCTaGTTCCCAGCCCTCCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: QILNESPFLLVCSSGCIPQSGLL*FPALLP Trigger: CGGGAGGAGGGCTGGGAACAAGAGCAGCCCACTCTG...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCCCGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGATGTGCTGCTGGCTCTaGCCTGAACCGGGCGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSSRLPGLPGPSYQHPQRMCCWL*PEPGGP Trigger: GGGCCCGCCCGGTTCAGGCCAGAGCCAGCAGCACAT...CCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACGGGAGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR TCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTCTGCTGGCTCTGGCCTaGACCGGGCGGGCCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSLLALA*TGRALA Trigger: GGCCAGGGCCCGCCCGGTTCAGGCCAGAGCCAGCAG...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCCCGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGGTTTGCCAAAGCGGCTaGGCTGGTTGGGGTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSRLPGLPGPSYQHPQRVCQSG*AGWGTG Trigger: GCCAGTACCCCAACCAGCCCAGCCGCTTTGGCAAAC...CCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACGGGAGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCCCGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGGAGGATCCCCGTTTGTaGGTGCATACTGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSRLPGLPGPSYQHPQREDPRL*VHTGLD Trigger: ATCCAGGCCAGTATGCACTCACAAACGGGGATCCTC...CCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACGGGAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTCACTCGATGTGCTGCTaGCTCTGGCCTGAACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSHSMCC*LWPEPG Trigger: GCCCGGTTCAGGCCAGAGCCAGCAGCACATCGAGTG...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTCCAAAGCGGCTGGGCTaGTTGGGGTACTGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSPKRLG*LGYWLL Trigger: GAGAAGCCAGTACCCCAACCAGCCCAGCCGCTTTGG...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTGTTTGCCAAAGCGGCTaGGCTGGTTGGGGTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSVCQSG*AGWGTG Trigger: GCCAGTACCCCAACCAGCCCAGCCGCTTTGGCAAAC...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCCCCACTCGACGGCGCTaGAGAGGAGGCGGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCPTRRR*RGGGLP Trigger: TGGCAGCCCGCCTCCTCTTCAGCGCCGTCGAGTGGG...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTATCGCAGCAGCAGTTTaGCAAAGCGGCTGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSIAAAV*QSGWAG Trigger: ACCAGCCCAGCCGCTTTGGCAAACTGCTGCTGCGAT...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTAGAAGAGTTGCTCGATaGCAGAGGAGGACACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSRRVAR*QRRTLC Trigger: GCACAGTGTCCTCCTCTGTCATCGAGCAACTCTTCT...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTCCGGCCACGTCGTCCTaGGGATCTCGCCAGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPPATSS*GSRQLL Trigger: TAGCAGCTGGCGAGATCCGCAGGACGACGTGGCCGG...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR TCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTACATGTAAGGCCAGTTaGAACTGCTCCCTGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSTCKAS*NCSLTA Trigger: TGCTGTCAGGGAGCAGTTTCAACTGGCCTTACATGT...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTTTTGTGAGTGCATACTaGCCTGGATTGGGCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSFVSAY*PGLGWV Trigger: AACCCAGCCCAATCCAGGCCAGTATGCACTCACAAA...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTTGCCATAACGCGACGTaGGGTAGGGCTCTGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPCHNAT*GRALRA Trigger: TGCGCGCAGAGCCCTACCCCACGTCGCGTTATGGCA...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCACGCACTCGATGTGCTaGTGGCTCTGGCCTGAACCG | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCTHSMC*WLWPEP Trigger: CGGTTCAGGCCAGAGCCAGCAGCACATCGAGTGCGT...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCCGTGGGGTAGGGCTCTaGGCGCAGCAGCAGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCRGVGL*AQQQRN Trigger: ATTTCTCTGCTGCTGCGCGCAGAGCCCTACCCCACG...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTCCAAAGCGGCTGGGCTaGTTGGGGTACTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPPKRLG*LGYWLL Trigger: GAGAAGCCAGTACCCCAACCAGCCCAGCCGCTTTGG...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCACCACGCACTCGATGTaGTGCTGGCTCTGGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCTTHSM*CWLWPE Trigger: TTCAGGCCAGAGCCAGCAGCACATCGAGTGCGTGGT...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATCGCAGCAGCAGTTTaGCAAAGCGGCTGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCIAAAV*QSGWAG Trigger: ACCAGCCCAGCCGCTTTGGCAAACTGCTGCTGCGAT...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGGAACCGGGCGGGCCCTaGCCCTTGTCCCCTGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEEPGGP*PLSPAV Trigger: CACGGCAGGGGACAAGGGCCAGGGCCCGCCCGGTTC...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCGAGTGCATACTGGCCTaGATTGGGCTGGGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCECILA*IGLGWR Trigger: CCTCCAACCCAGCCCAATCCAGGCCAGTATGCACTC...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTGAGTGCATACTGGCCTaGATTGGGCTGGGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPECILA*IGLGWR Trigger: CCTCCAACCCAGCCCAATCCAGGCCAGTATGCACTC...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCTGCAGGCTTTCGATGTaGGCAGCATCCGACAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCCRLSM*AASDRP Trigger: TGGCCTGTCGGATGCTGCCCACATCGAAAGCCTGCA...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTTGCAGGCTTTCGATGTaGGCAGCATCCGACAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPCRLSM*AASDRP Trigger: TGGCCTGTCGGATGCTGCCCACATCGAAAGCCTGCA...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCCAGAGGAGGACACTGTaGGAAGAGAGGGCAATCGCA | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCQRRTL*EERAIA Trigger: TGCGATTGCCCTCTCTTCGCACAGTGTCCTCCTCTG...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTTTCTCCACCTGTTCCTaGAAGATGCGGATGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPFSTCS*KMRMWS Trigger: GGACCACATCCGCATCTTTCAGGAACAGGTGGAGAA...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTATCCCCGTTTGTGAGTaGATACTGGCCTGGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: QILNESPFLLVCSSGCIPIPVCE*ILAWIG Trigger: CCCAATCCAGGCCAGTATGCACTCACAAACGGGGAT...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATCCCCGTTTGTGAGTaGATACTGGCCTGGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: TDQILNESPFLLVCSSGCIPVCE*ILAWIG Trigger: CCCAATCCAGGCCAGTATGCACTCACAAACGGGGAT...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | AGCCTCGACAACATATATCGCACTCATTATAAGAAGCAAAGGGTTATATCAAAATGCCATAACGCGACGTaGGGTAGGGCTCTGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SLDNIYRTHYKKQRVISKCHNAT*GRALRA Trigger: TGCGCGCAGAGCCCTACCCCACGTCGCGTTATGGCA...TTTTGATATAACCCTTTGCTTCTTATAATGAGTGCGATATATGTTGTCGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR TCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGGGCATTCTTCCTCGCTaGACCGCTTCCCGCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEGILPR*TASRLM Trigger: CATGAGGCGGGAAGCGGTTCAGCGAGGAAGAATGCC...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR GCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGCGTGGGGTAGGGCTCTaGGCGCAGCAGCAGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYERGVGL*AQQQRN Trigger: ATTTCTCTGCTGCTGCGCGCAGAGCCCTACCCCACG...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAAGCGGCTGGGCTGGTTaGGGTACTGGCTTCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKSGWAG*GTGFSH Trigger: ATGTGAGAAGCCAGTACCCCAACCAGCCCAGCCGCT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGAGCGGCTGGGCTGGTTaGGGTACTGGCTTCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYESGWAG*GTGFSH Trigger: ATGTGAGAAGCCAGTACCCCAACCAGCCCAGCCGCT...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGGAGGATCCCCGTTTGTaGGTGCATACTGGCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEEDPRL*VHTGLD Trigger: ATCCAGGCCAGTATGCACTCACAAACGGGGATCCTC...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAACTCCAGGGCACACTGTaGTTTCTCCTGCAGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKLQGTL*FLLQAF Trigger: GAAAGCCTGCAGGAGAAATCACAGTGTGCCCTGGAG...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGCAGAGGAGGACACTGTaGGAAGAGAGGGCAATCGCA | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEQRRTL*EERAIA Trigger: TGCGATTGCCCTCTCTTCGCACAGTGTCCTCCTCTG...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGTGGATTGGGCTGGGTTaGAGGCATTCTTCCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEWIGLG*RHSSSL Trigger: CAGCGAGGAAGAATGCCTCCAACCCAGCCCAATCCA...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAATGGCCTGGATTGGGCTaGGTTGGAGGCATTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKWPGLG*VGGILP Trigger: AGGAAGAATGCCTCCAACCCAGCCCAATCCAGGCCA...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR TCA 90 bp | AGCCTCGACAACATATATCGCACTCATTATAAGAAGCAAAGGGTTATATCAAAATTCTCCACCTGTTCCTaGAAGATGCGGATGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLDNIYRTHYKKQRVISKFSTCS*KMRMWS Trigger: GGACCACATCCGCATCTTTCAGGAACAGGTGGAGAA...TTTTGATATAACCCTTTGCTTCTTATAATGAGTGCGATATATGTTGTCGAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR TCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAAGAAGAGTTGCTCGATaGCAGAGGAGGACACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKRRVAR*QRRTLC Trigger: GCACAGTGTCCTCCTCTGTCATCGAGCAACTCTTCT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR TCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAACATGTAAGGCCAGTTaGAACTGCTCCCTGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKTCKAS*NCSLTA Trigger: TGCTGTCAGGGAGCAGTTTCAACTGGCCTTACATGT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAACACTGTGATTTCTCCTaGAGGCTTTCGATGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKHCDFS*RLSMWA Trigger: TGCCCACATCGAAAGCCTGCAGGAGAAATCACAGTG...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGCACTGTGATTTCTCCTaGAGGCTTTCGATGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEHCDFS*RLSMWA Trigger: TGCCCACATCGAAAGCCTGCAGGAGAAATCACAGTG...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAACGTACGAAGAAGAGTTaGTCGATGACAGAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKRTKKS*SMTEED Trigger: GTCCTCCTCTGTCATCGAGCAACTCTTCTTCGTACG...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR GCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGCGTACGAAGAAGAGTTaGTCGATGACAGAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYERTKKS*SMTEED Trigger: GTCCTCCTCTGTCATCGAGCAACTCTTCTTCGTACG...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CCA 90 bp | ATAACAATGTTCAGTGTATGTTTCTACATAGGATTCAGTCCACTTCCATATGAGTTTGTGAGTGCATACTaGCCTGGATTGGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITMFSVCFYIGFSPLPYEFVSAY*PGLGWV Trigger: AACCCAGCCCAATCCAGGCCAGTATGCACTCACAAA...CTCATATGGAAGTGGACTGAATCCTATGTAGAAACATACACTGAACATTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS CCA 90 bp | ACGCACTCGATGTGCTGCTGGCTCTGGCCTGAACCGGGCGGGCCCTaGCCCTTGTCCCCTGCCGTGCCGGGGGTGGCGGGCGCTCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: THSMCCWLWPEPGGP*PLSPAVPGVAGAPG Trigger: GCCCGGAGCGCCCGCCACCCCCGGCACGGCAGGGGACAAGGGCCAGGGCCCGCCCGGTTCAGGCCAGAGCCAGCAGCACATCGAGTGCGT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CAA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTAATCGCAGCAGCAGTTaGCCAAAGCGGCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSNRSSS*PKRLGW Trigger: CCAGCCCAGCCGCTTTGGCAAACTGCTGCTGCGATT...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CAA 90 bp | CGTCTGCCTGGCCTGCCTGGTCCATCATACCAGCATCCCCAAAGGCTTTTTAGTGCATACTGGCCTGGATaGGGCTGGGTTGGAGGCATT | + |
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Preference number: 5 (lower is better) Translates to: RLPGLPGPSYQHPQRLFSAYWPG*GWVGGI Trigger: AATGCCTCCAACCCAGCCCAATCCAGGCCAGTATGC...ACTAAAAAGCCTTTGGGGATGCTGGTATGATGGACCAGGCAGGCCAGGCAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CAA 90 bp | ACAGATCAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCAAGCGGCTGGGCTGGTaGGGGTACTGGCTTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: TDQILNESPFLLVCSSGCKRLGW*GYWLLT Trigger: TGTGAGAAGCCAGTACCCCAACCAGCCCAGCCGCTT...GCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTGATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CAA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTAAGCGGCTGGGCTGGTaGGGGTACTGGCTTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: QILNESPFLLVCSSGCIPKRLGW*GYWLLT Trigger: TGTGAGAAGCCAGTACCCCAACCAGCCCAGCCGCTT...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CAA 90 bp | CAGATCCTAAATGAGTCTCCTTTTCTCCTGGTTTGCAGCTCAGGTTGCATTCCTCTGGATTGGGCTGGGTaGGAGGCATTCTTCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QILNESPFLLVCSSGCIPLDWAG*EAFFLA Trigger: AGCGAGGAAGAATGCCTCCAACCCAGCCCAATCCAG...AGGAATGCAACCTGAGCTGCAAACCAGGAGAAAAGGAGACTCATTTAGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CAA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAAATCGCAGCAGCAGTTaGCCAAAGCGGCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKNRSSS*PKRLGW Trigger: CCAGCCCAGCCGCTTTGGCAAACTGCTGCTGCGATT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS-3UTR CAA 90 bp | AGCCTCGACAACATATATCGCACTCATTATAAGAAGCAAAGGGTTATATCAAAACTGCGGACGCTCCTCTaGAAGAAACTTTTGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SLDNIYRTHYKKQRVISKLRTLL*KKLLQP Trigger: GGGCTGCAAAAGTTTCTTCAAGAGGAGCGTCCGCAG...TTTTGATATAACCCTTTGCTTCTTATAATGAGTGCGATATATGTTGTCGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS-3UTR CAA 90 bp | AATCCTGGAAGGTCCATCTATTTTATTAAATTTCTCATGGTCCTCTCTTCCAAAACGTACGAAGAAGAGTaGCTCGATGACAGAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NPGRSIYFIKFLMVLSSKTYEEE*LDDRGG Trigger: TCCTCCTCTGTCATCGAGCAACTCTTCTTCGTACGT...TTTGGAAGAGAGGACCATGAGAAATTTAATAAAATAGATGGACCTTCCAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091458.13 ENSMUST00000150498.8 |
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| CDS CAA 72 bp | TGCTGGCTCTGGCCTGAACCGGGCGGGCCCTGGCCCTaGTCCCCTGCCGTGCCGGGGGTGGCGGGCGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: CWLWPEPGGPWP*SPAVPGVAGAP Trigger: CGGAGCGCCCGCCACCCCCGGCACGGCAGGGGACAAGGGCCAGGGCCCGCCCGGTTCAGGCCAGAGCCAGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS CAA 90 bp | TCGATGTGCTGCTGGCTCTGGCCTGAACCGGGCGGGCCCTGGCCCTaGTCCCCTGCCGTGCCGGGGGTGGCGGGCGCTCCGGGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SMCCWLWPEPGGPWP*SPAVPGVAGAPGWP Trigger: GGGCCAGCCCGGAGCGCCCGCCACCCCCGGCACGGCAGGGGACAAGGGCCAGGGCCCGCCCGGTTCAGGCCAGAGCCAGCAGCACATCGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS CCA 72 bp | ATGTGCTGCTGGCTCTGGCCTGAACCGGGCGGGCCCTaGCCCTTGTCCCCTGCCGTGCCGGGGGTGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MCCWLWPEPGGP*PLSPAVPGVAG Trigger: GCCCGCCACCCCCGGCACGGCAGGGGACAAGGGCCAGGGCCCGCCCGGTTCAGGCCAGAGCCAGCAGCACAT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS CCA 72 bp | TCCCCGCACACCACGCACTCGATGTGCTGCTGGCTCTaGCCTGAACCGGGCGGGCCCTGGCCCTTGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPHTTHSMCCWL*PEPGGPWPLSP Trigger: AGGGGACAAGGGCCAGGGCCCGCCCGGTTCAGGCCAGAGCCAGCAGCACATCGAGTGCGTGGTGTGCGGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS CCA 72 bp | GTTTGTGAGTGCATACTGGCCTGGATTGGGCTGGGTTaGAGGCATTCTTCCTCGCTGAACCGCTTCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VCECILAWIGLG*RHSSSLNRFPP Trigger: AGGCGGGAAGCGGTTCAGCGAGGAAGAATGCCTCCAACCCAGCCCAATCCAGGCCAGTATGCACTCACAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091458.13 |
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| CDS CCA 72 bp | GTTTGTGAGTGCATACTGGCCTGGATTGGGCTGGGTTaGAGGCATTCTTCCTCGCTGAACCGAGTAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VCECILAWIGLG*RHSSSLNRVAK Trigger: TTTGGCTACTCGGTTCAGCGAGGAAGAATGCCTCCAACCCAGCCCAATCCAGGCCAGTATGCACTCACAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125176.3 ENSMUST00000224798.2 |
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