Pregenerated sensors for NR2E3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032292Ensembl transcript IDs: ENSMUST00000034831.3
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCTATTTCCCCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTTCAACTTCCAGCCTATaGAATGTCTCCATGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: AISPLPTPYPPRGDFWLSSTSSL*NVSMSH Trigger: ATGAGACATGGAGACATTTCATAGGCTGGAAGTTGA...AGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGGGGAAATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACCCAGAGGTGACTTCTaGCTTTCTCTCTATCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLPRGDF*LSLYQS Trigger: AGACTGATAGAGAGAAAGCCAGAAGTCACCTCTGGG...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR-3UTR TCA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTATGTGGAATTACTGGCTaGGAAAGGCAGGGAACTATT | + |
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Preference number: 2 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLCGITG*ERQGTI Trigger: AATAGTTCCCTGCCTTTCTCAGCCAGTAATTCCACA...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCCCCTCCCTGCCTCTGGTCTTGAACACAGGATAAACGTGCCTGGCTTTTGTCTCCATGTCTCATaGACCTACTGTTCATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SFPLPASGLEHRINVPGFCLHVS*TYCSFL Trigger: TAAAAATGAACAGTAGGTCCATGAGACATGGAGACA...AAAGCCAGGCACGTTTATCCTGTGTTCAAGACCAGAGGCAGGGAGGGGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR GCA 72 bp | AGAAAGGCAGGGAACTATTTAGCTTCTAAGATGTGCTaGCCCCCTGGGTGCCTGTGGACACTTGGCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: RKAGNYLASKMC*PPGCLWTLGTP Trigger: GGGAGTGCCAAGTGTCCACAGGCACCCAGGGGGGCAGCACATCTTAGAAGCTAAATAGTTCCCTGCCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR TCA 72 bp | ATAAACGTGCCTGGCTTTTGTTCAACTTCCAGCCTATaGAATGTCTCCATGTCTCATGGACCTACTGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: INVPGFCSTSSL*NVSMSHGPTVH Trigger: ATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGCACGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR CCA 72 bp | TGCTCAATGAGCTTTAATGACTATCAACTTATCATCTaGATCCAAATAAAGGGCATTCCTAGTGCGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: CSMSFNDYQLII*IQIKGIPSAGG Trigger: GCCTCCCGCACTAGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCATTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR TCA 72 bp | ATATTTTGGGAGAAATTTCTGCTAGGTAGGAATACCTaGATGTGGAATTACTGGCTGAGAAAGGCAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: IFWEKFLLGRNT*MWNYWLRKAGN Trigger: GTTCCCTGCCTTTCTCAGCCAGTAATTCCACATTCAGGTATTCCTACCTAGCAGAAATTTCTCCCAAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| 3UTR TCA 72 bp | AAAATACAGCAAAGTGCATGGATTTTAAGTGCTCAATaGGCTTTAATGACTATCAACTTATCATCTGGATCC | + |
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Preference number: 3 (lower is better) Translates to: KIQQSAWILSAQ*ALMTINLSSGS Trigger: GGATCCAGATGATAAGTTGATAGTCATTAAAGCTCATTGAGCACTTAAAATCCATGCACTTTGCTGTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGACGCCTCAGGTGGTaGCAGCAGTGGGCAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CGRLFPLFQPPTHPEVTSGRLRW*QQWAAV Trigger: GACAGCTGCCCACTGCTGGCACCACCTGAGGCGTCC...AGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | GCTATTTCCCCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTGCCCATGGCTCTGGTTaGAGACACAGACGTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AISPLPTPYPPRGDFWLSAHGSG*RHRRGA Trigger: GGCCCCACGTCTGTGTCTGCAACCAGAGCCATGGGC...AGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGGGGAAATAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTCTCTATCAGATGGGCCTTATCCACTaGGCACATCCCTGCCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: PLPTPYPPRGDFWLSLYQMGLIH*AHPCPD Trigger: GTCGGGGCAGGGATGTGCCCAGTGGATAAGGCCCAT...CTGATAGAGAGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR TCA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACGGCAGGCCTGGCACTaGTTGCGATGGGCCTTATCC | + |
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Preference number: 4 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLRQAWH*LRWALS Trigger: GGATAAGGCCCATCGCAATCAGTGCCAGGCCTGCCG...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCAAGGCCAGCCTGCCCTaGGAGCTGCCGGACGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AWLLFNFQPMKCLHVSWTKASLP*ELPDAS Trigger: TGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCCTT...GGTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTCTCTATCAGACCTGGGACTGGTCCTaGAAAGCCTCCACGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PLPTPYPPRGDFWLSLYQTWDWS*KASTCS Trigger: TGAGCACGTGGAGGCTTTGCAGGACCAGTCCCAGGT...CTGATAGAGAGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACTCGGAACCGGGAGATaGTTTCCTGCAGGAAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLLGTGR*FPAGSA Trigger: CGCGCTTCCTGCAGGAAACCATCTCCCGGTTCCGAG...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCCCTCCCTGCCTCTGGTCTTGAACACAGGATAAACGTGCCTGGCTTTAGGCCTGGCACTGATTaGGATGGGCCTTATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLPASGLEHRINVPGFRPGTD*DGPYPL Trigger: CAGTGGATAAGGCCCATCGCAATCAGTGCCAGGCCT...AAAGCCAGGCACGTTTATCCTGTGTTCAAGACCAGAGGCAGGGAGGGGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTCTCTATCAGTGGGGTGGTGAGCCTTaGTATGCTGGCTTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPTPYPPRGDFWLSLYQWGGEP*YAGLAS Trigger: TGATGCTAAGCCAGCATAGCAAGGCTCACCACCCCA...CTGATAGAGAGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTCTCTATCAGCGAGCAGATGTCTCATaGATGCCATCCAGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PLPTPYPPRGDFWLSLYQRADVS*MPSRLQ Trigger: CTGCAGTCTGGATGGCATCCATGAGACATCTGCTCG...CTGATAGAGAGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR TCA 90 bp | TGCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACGGCTGGCTGGGGTGGTaGGCCTTGCTATGCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: CLAFVQLPAYEMSPCLMDGWLGW*ALLCWL Trigger: AAGCCAGCATAGCAAGGCTCACCACCCCAGCCAGCC...GTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACAGATGTCTCATGGATaGCATCCAGACTGCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLQMSHG*HPDCRG Trigger: CCCCCTGCAGTCTGGATGGCATCCATGAGACATCTG...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCCTCTGTGGGATCCACTaGCAGAGCTCGGAACCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AWLLFNFQPMKCLHVSWTLCGIH*QSSEPG Trigger: TCCCGGTTCCGAGCTCTGGCAGTGGATCCCACAGAG...GGTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TGCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCACTGGGCACATCCCTaGCCCGACTTGGCACCTGTA | + |
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Preference number: 4 (lower is better) Translates to: CLAFVQLPAYEMSPCLMDHWAHP*PDLAPV Trigger: TACAGGTGCCAAGTCGGGGCAGGGATGTGCCCAGTG...GTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCCCTCCCTGCCTCTGGTCTTGAACACAGGATAAACGTGCCTGGCTTTGGTTGGCGCTCATTCTaGACAGCATCTTGGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: SFPLPASGLEHRINVPGFGWRSF*TASWFM Trigger: CATGAACCAAGATGCTGTGCAGAATGAGCGCCAACC...AAAGCCAGGCACGTTTATCCTGTGTTCAAGACCAGAGGCAGGGAGGGGAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR TCA 90 bp | TCCTTTCCCCTCCCTGCCTCTGGTCTTGAACACAGGATAAACGTGCCTGGCTTTCGGGGTCATTGCTGGTaGCATCAATATTCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SFPLPASGLEHRINVPGFRGHCW*HQYSLQ Trigger: CTGAAGAGAATATTGATGTCACCAGCAATGACCCCG...AAAGCCAGGCACGTTTATCCTGTGTTCAAGACCAGAGGCAGGGAGGGGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACATAATGTTTCCCACTaGTGCTGTCCCCACACACTC | + |
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Preference number: 4 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLHNVSH*CCPHTL Trigger: GAGTGTGTGGGGACAGCAGCAGTGGGAAACATTATG...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | GCTATTTCCCCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTGAAAAGCTCATTCCATaGCTCTTCCAGCAAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: AISPLPTPYPPRGDFWLSEKLIP*LFQQDH Trigger: GTGATCTTGCTGGAAGAGGCATGGAATGAGCTTTTC...AGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGGGGAAATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTGCCTGCCCTGAGAGCTaGCGGACGCCTCAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPAYEMSPCLMDLLFIFIACPES*RTPQVV Trigger: CACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGC...AATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCCCTCCCTGCCTCTGGTCTTGAACACAGGATAAACGTGCCTGGCTTTCATTGCAGGCATAGATaGCATAATGTTTCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SFPLPASGLEHRINVPGFHCRHR*HNVSHC Trigger: GCAGTGGGAAACATTATGGCATCTATGCCTGCAATG...AAAGCCAGGCACGTTTATCCTGTGTTCAAGACCAGAGGCAGGGAGGGGAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TGCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTGATCGGGGGTCACTaGCTGTTTCCATGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: CLAFVQLPAYEMSPCLMDLIGGH*LFPWHP Trigger: TGGATGCCATGGAAACAGGCAGTGACCCCCGATCAG...GTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CCAAGCAGAGTTAGGGGTATTAAGATTAGGATGGCAATGAATATGCCAATAATATGGCCAAGGCCAGCCTaGCCTGAGAGCTGCCGGACG | + |
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Preference number: 4 (lower is better) Translates to: PSRVRGIKIRMAMNMPIIWPRPA*PESCRT Trigger: CGTCCGGCAGCTCTCAGGGCAGGCTGGCCTTGGCCA...TATTATTGGCATATTCATTGCCATCCTAATCTTAATACCCCTAACTCTGCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGAGTTAGGGGTATTAAGATTAGGATGGCAATGAATATGCCAATAATAGCCGGACGCCTCAGGTaGTGCCAGCAGTGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSRVRGIKIRMAMNMPIIAGRLR*CQQWAA Trigger: AGCTGCCCACTGCTGGCACCACCTGAGGCGTCCGGC...TATTATTGGCATATTCATTGCCATCCTAATCTTAATACCCCTAACTCTGCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | CTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTCAGGAAGCGCGTCTCTaGACTGGCCAAGGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPAYEMSPCLMDLLFIFIQEARL*TGQGQP Trigger: AGGCTGGCCTTGGCCAGTGCAGAGACGCGCTTCCTG...AATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTTTAATGACTATCAACTTATCATCTGGATCCAAATAAAGGGCATTCCTCCACACACTCGGCACTaGAGCGAGGGGCCCACACCT | + |
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Preference number: 4 (lower is better) Translates to: MSFNDYQLIIWIQIKGIPPHTRH*SEGPTP Trigger: AGGTGTGGGCCCCTCGCTCCAGTGCCGAGTGTGTGG...AGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTTTAATGACTATCAACTTATCATCTGGATCCAAATAAAGGGCATTCCTAGCGCGTCTCTGCACTaGCCAAGGCCAGCCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: MSFNDYQLIIWIQIKGIPSASLH*PRPACP Trigger: AGGGCAGGCTGGCCTTGGCCAGTGCAGAGACGCGCT...AGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | TGCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACGCAGAGACCACTGTATaGCTCCAAGAAGGAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: CLAFVQLPAYEMSPCLMDAETTV*LQEGKA Trigger: AGCTTTTCCTTCTTGGAGCCATACAGTGGTCTCTGC...GTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTAAGGCCCCATCTACCTaGAGACTCCTTCTTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LPAYEMSPCLMDLLFIFIKAPST*RLLLGG Trigger: GCCTCCAAGAAGGAGTCTCCAGGTAGATGGGGCCTT...AATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTTTAATGACTATCAACTTATCATCTGGATCCAAATAAAGGGCATTCCTGGTGGCCCATGGCTCTaGTTGCAGACACAGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: MSFNDYQLIIWIQIKGIPGGPWL*LQTQTW Trigger: CCACGTCTGTGTCTGCAACCAGAGCCATGGGCCACC...AGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | TTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTTGGCAGGCAAACTCTGTaGGATCCACTGCCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FQPMKCLHVSWTYCSFLFGRQTL*DPLPEL Trigger: GAGCTCTGGCAGTGGATCCCACAGAGTTTGCCTGCC...AAATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGAGTTAGGGGTATTAAGATTAGGATGGCAATGAATATGCCAATAATAAGCATCACCTGGGACTaGTCCTGCAAAGCCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PSRVRGIKIRMAMNMPIISITWD*SCKAST Trigger: CGTGGAGGCTTTGCAGGACCAGTCCCAGGTGATGCT...TATTATTGGCATATTCATTGCCATCCTAATCTTAATACCCCTAACTCTGCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCTTTAATGACTATCAACTTATCATCTGGATCCAAATAAAGGGCATTCCTTGCAAAGCCTCCACGTaGTCAGGATCCTTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: MSFNDYQLIIWIQIKGIPCKAST*SGSFRP Trigger: AGGCCTGAAGGATCCTGAGCACGTGGAGGCTTTGCA...AGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTTTAATGACTATCAACTTATCATCTGGATCCAAATAAAGGGCATTCCTTGGCTTAGCATCACCTaGGACTGGTCCTGCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: MSFNDYQLIIWIQIKGIPWLSIT*DWSCKA Trigger: GGCTTTGCAGGACCAGTCCCAGGTGATGCTAAGCCA...AGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR GCA 90 bp | TTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTTAGCCACTGCAGCCATTaGAGGCATAGATGCCATAAT | + |
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Preference number: 4 (lower is better) Translates to: FQPMKCLHVSWTYCSFLFSHCSH*RHRCHN Trigger: ATTATGGCATCTATGCCTGCAATGGCTGCAGTGGCT...AAATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGAGTTAGGGGTATTAAGATTAGGATGGCAATGAATATGCCAATAATAGAGGAACCTCAAAGATaGGAGCAGGAGGAGCAATTT | + |
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Preference number: 4 (lower is better) Translates to: PSRVRGIKIRMAMNMPIIEEPQR*EQEEQF Trigger: AAATTGCTCCTCCTGCTCCCATCTTTGAGGTTCCTC...TATTATTGGCATATTCATTGCCATCCTAATCTTAATACCCCTAACTCTGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR TCA 90 bp | TTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTTTCCCTATGGTCTTTCTaGAGAAGAGAAGCTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: FQPMKCLHVSWTYCSFLFSLWSF*RREAQC Trigger: GCATTGAGCTTCTCTTCTTCAGAAAGACCATAGGGA...AAATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS TCA 90 bp | TCCTGCAGGAAGCGCGTCTCTGCACTGGCCAAGGCCAGCCTGCCCTaGGAGCTGCCGGACGCCTCAGGTGGTGCCAGCAGTGGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SCRKRVSALAKASLP*ELPDASGGASSGQL Trigger: CAGCTGCCCACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCCTTGGCCAGTGCAGAGACGCGCTTCCTGCAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | GGCCAAGGCCAGCCTGCCCTGAGAGCTGCCGGACGCCTCAGGTGGTaGCAGCAGTGGGCAGCTGTCCAGGGGCAGAGACCACTGTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQGQPALRAAGRLRW*QQWAAVQGQRPLYG Trigger: GCCATACAGTGGTCTCTGCCCCTGGACAGCTGCCCACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCCTTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | TGGTTTCCTGCAGGAAGCGCGTCTCTGCACTGGCCAAGGCCAGCCTaGCCTGAGAGCTGCCGGACGCCTCAGGTGGTGCCAGCAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WFPAGSASLHWPRPA*PESCRTPQVVPAVG Trigger: GCCCACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCCTTGGCCAGTGCAGAGACGCGCTTCCTGCAGGAAACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | CTCGGAACCGGGAGATGGTTTCCTGCAGGAAGCGCGTCTCTGCACTaGCCAAGGCCAGCCTGCCCTGAGAGCTGCCGGACGCCTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTGRWFPAGSASLH*PRPACPESCRTPQV Trigger: CACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCCTTGGCCAGTGCAGAGACGCGCTTCCTGCAGGAAACCATCTCCCGGTTCCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | CAGCCTGCCCTGAGAGCTGCCGGACGCCTCAGGTGGTGCCAGCAGTaGGCAGCTGTCCAGGGGCAGAGACCACTGTATGGCTCCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPALRAAGRLRWCQQ*AAVQGQRPLYGSKK Trigger: CTTCTTGGAGCCATACAGTGGTCTCTGCCCCTGGACAGCTGCCCACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS TCA 90 bp | CCGGGGACTGGGCCCTGCCAGAGCAGGAGAGGCTACCACTGGTTCTaGTCGGGGGTCACTGCCTGTTTCCATGGCATCCAGGTGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGTGPCQSRRGYHWF*SGVTACFHGIQVDL Trigger: CAGGTCCACCTGGATGCCATGGAAACAGGCAGTGACCCCCGATCAGAACCAGTGGTAGCCTCTCCTGCTCTGGCAGGGCCCAGTCCCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | CTTCAGCCGGCAGGCCTGGCACTGATTGCGATGGGCCTTATCCACTaGGCACATCCCTGCCCCGACTTGGCACCTGTAGATGAGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LQPAGLALIAMGLIH*AHPCPDLAPVDEPP Trigger: AGGAGGCTCATCTACAGGTGCCAAGTCGGGGCAGGGATGTGCCCAGTGGATAAGGCCCATCGCAATCAGTGCCAGGCCTGCCGGCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | AGGCAAACTCTGTGGGATCCACTGCCAGAGCTCGGAACCGGGAGATaGTTTCCTGCAGGAAGCGCGTCTCTGCACTGGCCAAGGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RQTLWDPLPELGTGR*FPAGSASLHWPRPA Trigger: GGCTGGCCTTGGCCAGTGCAGAGACGCGCTTCCTGCAGGAAACCATCTCCCGGTTCCGAGCTCTGGCAGTGGATCCCACAGAGTTTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | GAAGAGGACCAGGGCCTTCAGGCAGGCAAACTCTGTGGGATCCACTaGCAGAGCTCGGAACCGGGAGATGGTTTCCTGCAGGAAGCGCGT | + |
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Preference number: 5 (lower is better) Translates to: EEDQGLQAGKLCGIH*QSSEPGDGFLQEAR Trigger: ACGCGCTTCCTGCAGGAAACCATCTCCCGGTTCCGAGCTCTGGCAGTGGATCCCACAGAGTTTGCCTGCCTGAAGGCCCTGGTCCTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | CGAGGGGCCCACACCTGTTGGATCCTCTCCAAGGCCCCATCTACCTaGAGACTCCTTCTTGGAGGCCGCCACAGACACAGGCATAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGAHTCWILSKAPST*RLLLGGRHRHRHSG Trigger: TCCACTATGCCTGTGTCTGTGGCGGCCTCCAAGAAGGAGTCTCCAGGTAGATGGGGCCTTGGAGAGGATCCAACAGGTGTGGGCCCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | CACTGCAGCCATTGCAGGCATAGATGCCATAATGTTTCCCACTGCTaGTGTCCCCACACACTCGGCACTGGAGCGAGGGGCCCACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: HCSHCRHRCHNVSHC*CPHTLGTGARGPHL Trigger: CAGGTGTGGGCCCCTCGCTCCAGTGCCGAGTGTGTGGGGACAGCAGCAGTGGGAAACATTATGGCATCTATGCCTGCAATGGCTGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | AGCCACTGCAGCCATTGCAGGCATAGATGCCATAATGTTTCCCACTaGTGCTGTCCCCACACACTCGGCACTGGAGCGAGGGGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SHCSHCRHRCHNVSH*CCPHTLGTGARGPH Trigger: GTGTGGGCCCCTCGCTCCAGTGCCGAGTGTGTGGGGACAGCAGCAGTGGGAAACATTATGGCATCTATGCCTGCAATGGCTGCAGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | GGCCTGGCACTGATTGCGATGGGCCTTATCCACTGGGCACATCCCTaGCCCGACTTGGCACCTGTAGATGAGCCTCCTTCTCACACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLALIAMGLIHWAHP*PDLAPVDEPPSHTP Trigger: AGGAGTGTGAGAAGGAGGCTCATCTACAGGTGCCAAGTCGGGGCAGGGATGTGCCCAGTGGATAAGGCCCATCGCAATCAGTGCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS TCA 90 bp | AGCAGGAGGAGCAATTTCCCAAACCTCACAGGCTGGCTGGGGTGGTaGGCCTTGCTATGCTGGCTTAGCATCACCTGGGACTGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRSNFPNLTGWLGW*ALLCWLSITWDWSC Trigger: GCAGGACCAGTCCCAGGTGATGCTAAGCCAGCATAGCAAGGCTCACCACCCCAGCCAGCCTGTGAGGTTTGGGAAATTGCTCCTCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | GGGGGTCACTGCCTGTTTCCATGGCATCCAGGTGGACCTGAGCCATaGTCCGAGGTTGGCGCTCATTCTGCACAGCATCTTGGTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: GGHCLFPWHPGGPEP*SEVGAHSAQHLGSC Trigger: GCATGAACCAAGATGCTGTGCAGAATGAGCGCCAACCTCGGAGCATGGCTCAGGTCCACCTGGATGCCATGGAAACAGGCAGTGACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 90 bp | TGCTGGCTTAGCATCACCTGGGACTGGTCCTGCAAAGCCTCCACGTaGTCAGGATCCTTCAGGCCTCGTGTTTCAGGTTTGAAGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: CWLSITWDWSCKAST*SGSFRPRVSGLKRT Trigger: GGTCCTCTTCAAACCTGAAACACGAGGCCTGAAGGATCCTGAGCACGTGGAGGCTTTGCAGGACCAGTCCCAGGTGATGCTAAGCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | AAGATGGGAGCAGGAGGAGCAATTTCCCAAACCTCACAGGCTGGCTaGGGTGGTGAGCCTTGCTATGCTGGCTTAGCATCACCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: KMGAGGAISQTSQAG*GGEPCYAGLASPGT Trigger: AGTCCCAGGTGATGCTAAGCCAGCATAGCAAGGCTCACCACCCCAGCCAGCCTGTGAGGTTTGGGAAATTGCTCCTCCTGCTCCCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CAA 90 bp | TGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTCTTCTCACACTCCTCTaGAAGAAGCCACTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGRLFPLFQPPTHPEVTSLLTLL*KKPLQP Trigger: TGGCTGCAGTGGCTTCTTCAAGAGGAGTGTGAGAAG...AGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 90 bp | GAAGAAGAGAAGCTCAATGCGCTCAGCCGTGAGGAACCTCAAAGATaGGAGCAGGAGGAGCAATTTCCCAAACCTCACAGGCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EEEKLNALSREEPQR*EQEEQFPKPHRLAG Trigger: CCCAGCCAGCCTGTGAGGTTTGGGAAATTGCTCCTCCTGCTCCCATCTTTGAGGTTCCTCACGGCTGAGCGCATTGAGCTTCTCTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTTTTGTTCAACTTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCCATCCCTGCCCCGACTaGGCACCTGTAGATGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AWLLFNFQPMKCLHVSWTHPCPD*APVDEP Trigger: AGGCTCATCTACAGGTGCCAAGTCGGGGCAGGGATG...GGTCCATGAGACATGGAGACATTTCATAGGCTGGAAGTTGAACAAAAGCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CAA 90 bp | CCTCTTCCAACCCCCTACCCACCCAGAGGTGACTTCTGGCTTTCTCTCTATCAGGGGAACTCGGGGTCATaGCTGGTGACATCAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPTPYPPRGDFWLSLYQGNSGS*LVTSIF Trigger: GAATATTGATGTCACCAGCAATGACCCCGAGTTCCC...CTGATAGAGAGAAAGCCAGAAGTCACCTCTGGGTGGGTAGGGGGTTGGAAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CAA 90 bp | CAAATAAAGGGCATTCCTAGTGCGGGAGGCTATTTCCCCTCTTCCAACCCCCTACCTCGTGTTTCAGGTTaGAAGAGGACCAGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QIKGIPSAGGYFPSSNPLPRVSG*KRTRAF Trigger: GAAGGCCCTGGTCCTCTTCAAACCTGAAACACGAGG...TAGGGGGTTGGAAGAGGGGAAATAGCCTCCCGCACTAGGAATGCCCTTTATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CAA 90 bp | TTCCAGCCTATGAAATGTCTCCATGTCTCATGGACCTACTGTTCATTTTTATTTAGGGGCCCACACCTGTaGGATCCTCTCCAAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FQPMKCLHVSWTYCSFLFRGPHL*DPLQGP Trigger: GGGGCCTTGGAGAGGATCCAACAGGTGTGGGCCCCT...AAATAAAAATGAACAGTAGGTCCATGAGACATGGAGACATTTCATAGGCTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS-3UTR CAA 90 bp | ATGAGCTTTAATGACTATCAACTTATCATCTGGATCCAAATAAAGGGCATTCCTGGCCCATGGCTCTGGTaGCAGACACAGACGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSFNDYQLIIWIQIKGIPGPWLW*QTQTWG Trigger: GCCCCACGTCTGTGTCTGCAACCAGAGCCATGGGCC...AGGAATGCCCTTTATTTGGATCCAGATGATAAGTTGATAGTCATTAAAGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | GGCCAGCCTGCCCTGAGAGCTGCCGGACGCCTCAGGTaGTGCCAGCAGTGGGCAGCTGTCCAGGGGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GQPALRAAGRLR*CQQWAAVQGQR Trigger: TCTCTGCCCCTGGACAGCTGCCCACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 72 bp | CAGCCTGCCCTGAGAGCTGCCGGACGCCTCAGGTGGTaGCAGCAGTGGGCAGCTGTCCAGGGGCAGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: QPALRAAGRLRW*QQWAAVQGQRP Trigger: TGGTCTCTGCCCCTGGACAGCTGCCCACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS TCA 72 bp | AAGCGCGTCTCTGCACTGGCCAAGGCCAGCCTGCCCTaGGAGCTGCCGGACGCCTCAGGTGGTGCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRVSALAKASLP*ELPDASGGASS Trigger: ACTGCTGGCACCACCTGAGGCGTCCGGCAGCTCTCAGGGCAGGCTGGCCTTGGCCAGTGCAGAGACGCGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS TCA 72 bp | GGGCCCTGCCAGAGCAGGAGAGGCTACCACTGGTTCTaGTCGGGGGTCACTGCCTGTTTCCATGGCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPCQSRRGYHWF*SGVTACFHGIQ Trigger: CTGGATGCCATGGAAACAGGCAGTGACCCCCGATCAGAACCAGTGGTAGCCTCTCCTGCTCTGGCAGGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | CTGTGGGATCCACTGCCAGAGCTCGGAACCGGGAGATaGTTTCCTGCAGGAAGCGCGTCTCTGCACTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LWDPLPELGTGR*FPAGSASLHWP Trigger: TGGCCAGTGCAGAGACGCGCTTCCTGCAGGAAACCATCTCCCGGTTCCGAGCTCTGGCAGTGGATCCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 72 bp | CAGGGCCTTCAGGCAGGCAAACTCTGTGGGATCCACTaGCAGAGCTCGGAACCGGGAGATGGTTTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGLQAGKLCGIH*QSSEPGDGFLQ Trigger: CTGCAGGAAACCATCTCCCGGTTCCGAGCTCTGGCAGTGGATCCCACAGAGTTTGCCTGCCTGAAGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | GCAGGCCTGGCACTGATTGCGATGGGCCTTATCCACTaGGCACATCCCTGCCCCGACTTGGCACCTGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AGLALIAMGLIH*AHPCPDLAPVD Trigger: ATCTACAGGTGCCAAGTCGGGGCAGGGATGTGCCCAGTGGATAAGGCCCATCGCAATCAGTGCCAGGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | CACACCTGTTGGATCCTCTCCAAGGCCCCATCTACCTaGAGACTCCTTCTTGGAGGCCGCCACAGACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: HTCWILSKAPST*RLLLGGRHRHR Trigger: CCTGTGTCTGTGGCGGCCTCCAAGAAGGAGTCTCCAGGTAGATGGGGCCTTGGAGAGGATCCAACAGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CAA 72 bp | TCCTCTCCAAGGCCCCATCTACCTGGAGACTCCTTCTaGGAGGCCGCCACAGACACAGGCATAGTGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSPRPHLPGDSF*EAATDTGIVEA Trigger: TGCCTCCACTATGCCTGTGTCTGTGGCGGCCTCCAAGAAGGAGTCTCCAGGTAGATGGGGCCTTGGAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CAA 90 bp | CCTGTTGGATCCTCTCCAAGGCCCCATCTACCTGGAGACTCCTTCTaGGAGGCCGCCACAGACACAGGCATAGTGGAGGCAGCCACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PVGSSPRPHLPGDSF*EAATDTGIVEAATV Trigger: TACAGTGGCTGCCTCCACTATGCCTGTGTCTGTGGCGGCCTCCAAGAAGGAGTCTCCAGGTAGATGGGGCCTTGGAGAGGATCCAACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 72 bp | CTGATTGCGATGGGCCTTATCCACTGGGCACATCCCTaGCCCGACTTGGCACCTGTAGATGAGCCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LIAMGLIHWAHP*PDLAPVDEPPS Trigger: AGAAGGAGGCTCATCTACAGGTGCCAAGTCGGGGCAGGGATGTGCCCAGTGGATAAGGCCCATCGCAATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CAA 72 bp | ATGGGCCTTATCCACTGGGCACATCCCTGCCCCGACTaGGCACCTGTAGATGAGCCTCCTTCTCACACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MGLIHWAHPCPD*APVDEPPSHTP Trigger: AGGAGTGTGAGAAGGAGGCTCATCTACAGGTGCCAAGTCGGGGCAGGGATGTGCCCAGTGGATAAGGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS TCA 72 bp | AGCAATTTCCCAAACCTCACAGGCTGGCTGGGGTGGTaGGCCTTGCTATGCTGGCTTAGCATCACCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SNFPNLTGWLGW*ALLCWLSITWD Trigger: GTCCCAGGTGATGCTAAGCCAGCATAGCAAGGCTCACCACCCCAGCCAGCCTGTGAGGTTTGGGAAATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 72 bp | AGCCATTGCAGGCATAGATGCCATAATGTTTCCCACTaGTGCTGTCCCCACACACTCGGCACTGGAGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHCRHRCHNVSH*CCPHTLGTGAR Trigger: CCTCGCTCCAGTGCCGAGTGTGTGGGGACAGCAGCAGTGGGAAACATTATGGCATCTATGCCTGCAATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS GCA 72 bp | AGCATCACCTGGGACTGGTCCTGCAAAGCCTCCACGTaGTCAGGATCCTTCAGGCCTCGTGTTTCAGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SITWDWSCKAST*SGSFRPRVSGL Trigger: CAAACCTGAAACACGAGGCCTGAAGGATCCTGAGCACGTGGAGGCTTTGCAGGACCAGTCCCAGGTGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | GCAGGAGGAGCAATTTCCCAAACCTCACAGGCTGGCTaGGGTGGTGAGCCTTGCTATGCTGGCTTAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: AGGAISQTSQAG*GGEPCYAGLAS Trigger: TGATGCTAAGCCAGCATAGCAAGGCTCACCACCCCAGCCAGCCTGTGAGGTTTGGGAAATTGCTCCTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | ATGCTCCGAGGTTGGCGCTCATTCTGCACAGCATCTTaGTTCATGCCTGCTTGTAAGCACTTCTTCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: MLRGWRSFCTAS*FMPACKHFFSR Trigger: CCGGCTGAAGAAGTGCTTACAAGCAGGCATGAACCAAGATGCTGTGCAGAATGAGCGCCAACCTCGGAGCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | AAGCTCAATGCGCTCAGCCGTGAGGAACCTCAAAGATaGGAGCAGGAGGAGCAATTTCCCAAACCTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: KLNALSREEPQR*EQEEQFPKPHR Trigger: CCTGTGAGGTTTGGGAAATTGCTCCTCCTGCTCCCATCTTTGAGGTTCCTCACGGCTGAGCGCATTGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CAA 72 bp | TCCCGGAAAGGCAGGTTGGAAAACACAGGCAAGTTTTaGGCCCATTTGACAGCCATGAAGAGCAGGCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRKGRLENTGKF*AHLTAMKSRRA Trigger: TGCTCGCCTGCTCTTCATGGCTGTCAAATGGGCCAAAAACTTGCCTGTGTTTTCCAACCTGCCTTTCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CAA 90 bp | TCCCGGAAAGGCAGGTTGGAAAACACAGGCAAGTTTTTGGCCCATTaGACAGCCATGAAGAGCAGGCGAGCAGATGTCTCATGGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRKGRLENTGKFLAH*TAMKSRRADVSWMP Trigger: TGGCATCCATGAGACATCTGCTCGCCTGCTCTTCATGGCTGTCAAATGGGCCAAAAACTTGCCTGTGTTTTCCAACCTGCCTTTCCGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CAA 90 bp | ATCACCTGGTCCCGGAAAGGCAGGTTGGAAAACACAGGCAAGTTTTaGGCCCATTTGACAGCCATGAAGAGCAGGCGAGCAGATGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ITWSRKGRLENTGKF*AHLTAMKSRRADVS Trigger: TGAGACATCTGCTCGCCTGCTCTTCATGGCTGTCAAATGGGCCAAAAACTTGCCTGTGTTTTCCAACCTGCCTTTCCGGGACCAGGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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| CDS CCA 72 bp | ATTGCTGGTGACATCAATATTCTCTTCAGCGTCCTCTaGCTCCAGTTTAGCACAAGTTTCGGCGGTGATAAG | + |
|
Preference number: 6 (lower is better) Translates to: IAGDINILFSVL*LQFSTSFGGDK Trigger: CTTATCACCGCCGAAACTTGTGCTAAACTGGAGCCAGAGGACGCTGAAGAGAATATTGATGTCACCAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034831.3 |
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