Pregenerated sensors for NR2C2AP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071078Ensembl transcript IDs: ENSMUST00000095273.7, ENSMUST00000211898.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAGTGAAGACAGCCTaGTGGGAACCCAGGCACTCAGGGACAGTCAGCCCACAACTGGCT | + |
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Preference number: 1 (lower is better) Translates to: VPEHPGACGPRVKTA*WEPRHSGTVSPQLA Trigger: AGCCAGTTGTGGGCTGACTGTCCCTGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CCA 90 bp | CAGCCTGCTGGGAACCCAGGCACTCAGGGACAGTCAGCCCACAACTaGCTTGAAAGGCAGCTCCTGGACAGTGGTGGGAAGAGCCCTCCG | + |
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Preference number: 1 (lower is better) Translates to: QPAGNPGTQGQSAHN*LERQLLDSGGKSPP Trigger: CGGAGGGCTCTTCCCACCACTGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTGACTGTCCCTGAGTGCCTGGGTTCCCAGCAGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR TCA 90 bp | ATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAGTaGAGACAGCCTGCTGGGAACCCAGGCACTCAGGGACAGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ILRLFQSTLGPVDPE*RQPAGNPGTQGQSA Trigger: GGCTGACTGTCCCTGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR TCA 90 bp | GGCTGGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTaGGCATCTTCTTCAGTCCCTTCTTCCCGGCTCCCCCAGCTCACC | + |
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Preference number: 1 (lower is better) Translates to: GWTVSCSRPPVYIRG*ASSSVPSSRLPQLT Trigger: GGTGAGCTGGGGGAGCCGGGAAGAAGGGACTGAAGAAGATGCTCAGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CCA 90 bp | GGTAGTGAGCCCAGCCCAGCAAGAACAGAAAAGCAGAAAAGCACTTaGCTGGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GSEPSPARTEKQKST*LDSFLLTASCLHQR Trigger: CCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTCTTGCTGGGCTGGGCTCACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CAA 90 bp | CTGCTGGGAACCCAGGCACTCAGGGACAGTCAGCCCACAACTGGCTaGAAAGGCAGCTCCTGGACAGTGGTGGGAAGAGCCCTCCGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LLGTQALRDSQPTTG*KGSSWTVVGRALRN Trigger: GTTGCGGAGGGCTCTTCCCACCACTGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTGACTGTCCCTGAGTGCCTGGGTTCCCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAGTGTGAAGACAGCCTGCTaGGAACCCAGGCACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RATSSDCSRAPWGLWTPSVKTAC*EPRHSG Trigger: CCCTGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCAC...ACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACGCTCCTGGACAGTGGTaGGAAGAGCCCTCCGCAACA | + |
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Preference number: 2 (lower is better) Translates to: VMESHILRLFQSTLGPVDAPGQW*EEPSAT Trigger: TGTTGCGGAGGGCTCTTCCCACCACTGTCCAGGAGC...GTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | GATTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAGTGAAGACAGCCTGCTGCAGTCAGCCCACAACTaGCTTGAAAGGCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: DCSRAPWGLWTPSEDSLLQSAHN*LERQLL Trigger: CAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTGACTG...CAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACTCATGGTTCTGGAGGCAGAGAGAGCTACAATTCGGAGGGTGGGTGGGATGCAGCTCCTGGACAGTaGTGGGAAGAGCCCTCCGCA | + |
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Preference number: 2 (lower is better) Translates to: WTHGSGGRESYNSEGGWDAAPGQ*WEEPSA Trigger: TGCGGAGGGCTCTTCCCACCACTGTCCAGGAGCTGC...ATCCCACCCACCCTCCGAATTGTAGCTCTCTCTGCCTCCAGAACCATGAGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTGAGCATCTTCTTGCACCCTGGGGCCTGTaGACCCCGAGTGAAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: GQFPAHGLLFTSEAEHLLAPWGL*TPSEDS Trigger: GCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGC...AAGAAGATGCTCAGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATGGTTCTGGAGGCAGAGAGAGCTACAATTCGGAGGGTGGGTGGGATACAGCGAGTGAAGACAGCCTaGTGGGAACCCAGGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: LMVLEAERATIRRVGGIQRVKTA*WEPRHS Trigger: TGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCG...CTGTATCCCACCCACCCTCCGAATTGTAGCTCTCTCTGCCTCCAGAACCATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTGCTCCTGGACAGTGGTaGGAAGAGCCCTCCGCAACA | + |
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Preference number: 2 (lower is better) Translates to: KHLAGQFPAHGLLFTSEAAPGQW*EEPSAT Trigger: TGTTGCGGAGGGCTCTTCCCACCACTGTCCAGGAGC...AGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACGGTCCACCTCCATTGTaGGGATGGAGAAGGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VMESHILRLFQSTLGPVDGPPPL*GWRRSE Trigger: TTCAGACCTTCTCCATCCCCACAATGGAGGTGGACC...GTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTGGACAATCTGTGCAGAACTTaGAGGTCTTCAGGGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VMESHILRLFQSTLGPVDNLCRT*RSSGCL Trigger: GAGGCACCCTGAAGACCTTCAAGTTCTGCACAGATT...GTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCACAGTGCAACAGGTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACAGCCCACAACTGGCTTaGAAGGCAGCTCCTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: SHSATGDGEPHPQIVPEHSPQLA*KAAPGQ Trigger: CTGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCT...GTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCACCTGTTGCACTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGGTTCTGGAGGCAGAGAGAGCTACAATTCGGAGGGTGGGTGGGATACAGGGGATGGAGAAGGTCTaGAGGGCATTGGTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LMVLEAERATIRRVGGIQGMEKV*RALVSS Trigger: TGAGGACACCAATGCCCTTCAGACCTTCTCCATCCC...CTGTATCCCACCCACCCTCCGAATTGTAGCTCTCTCTGCCTCCAGAACCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTGAGCATCGGCTGGACAGTTTCCTaGTCACGGCCTCCTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: WLDSFLLTASCLHQRLSIGWTVS*SRPPVY Trigger: GTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCC...GATGCTCAGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGTGCAACAGGTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCTTGAAAGGCAGCTCCTaGACAGTGGTGGGAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PTVQQVMESHILRLFQSTLKGSS*TVVGRA Trigger: GGCTCTTCCCACCACTGTCCAGGAGCTGCCTTTCAA...GGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCACCTGTTGCACTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTGCAGTCAGCCCACAACTaGCTTGAAAGGCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: STWLDSFLLTASCLHQRLQSAHN*LERQLL Trigger: CAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTGACTG...CAGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CAA 90 bp | AGTCGGTGGTGTCCTCAAAAGTCAACTTCAGTCGGTCCACCTCCATaGTGGGGATGGAGAAGGTCTGAAGGGCATTGGTGTCCTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SRWCPQKSTSVGPPP*WGWRRSEGHWCPQG Trigger: ACCCTGAGGACACCAATGCCCTTCAGACCTTCTCCATCCCCACAATGGAGGTGGACCGACTGAAGTTGACTTTTGAGGACACCACCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAGAAAAGCAGAAAAGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCCTAGCCCACAACTGGCTTaGAAGGCAGCTCCTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: EQKSRKALGWTVSCSRPPSPQLA*KAAPGQ Trigger: CTGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCT...AGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAAACCTTGCCTTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCCCAGCACCACAGTGCAACAGGTaGTGGAGAGCCACATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GKPCLKATYSQGSEPSPAPQCNR*WRATSS Trigger: TGAGGATGTGGCTCTCCATCACCTGTTGCACTGTGG...TGCTGGGCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAAGGCAAGGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCAAGAACAGAAAAGCAGAAAAGCACTTGGCTGGACAGTTTCCTGCTCACGAGTGAAGACAGCCTaGTGGGAACCCAGGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: AQQEQKSRKALGWTVSCSRVKTA*WEPRHS Trigger: TGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCG...TGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTCTTGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAACCTTGCCTTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCCCAGGGCTGGACAGTTTCCTaGTCACGGCCTCCTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: QANLALKQPILKVVSPAQGWTVS*SRPPVY Trigger: GTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCC...CTGGGCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAAGGCAAGGTTTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAGAAAAGCAGAAAAGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCTTGAAAGGCAGCTCCTaGACAGTGGTGGGAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: KNRKAEKHLAGQFPAHGLLKGSS*TVVGRA Trigger: GGCTCTTCCCACCACTGTCCAGGAGCTGCCTTTCAA...GAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCTTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCCCAGCAAGAACAGAATCTGTGCAGAACTTaGAGGTCTTCAGGGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LALKQPILKVVSPAQQEQNLCRT*RSSGCL Trigger: GAGGCACCCTGAAGACCTTCAAGTTCTGCACAGATT...CTGTTCTTGCTGGGCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAAGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAGAAAAGCAGAAAAGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCGAGACAGGCAAACCTTaGCTTAAAGCAACCTATTCT | + |
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Preference number: 2 (lower is better) Translates to: KNRKAEKHLAGQFPAHGLETGKP*LKATYS Trigger: AGAATAGGTTGCTTTAAGGCAAGGTTTGCCTGTCTC...GAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR TCA 72 bp | TTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAGTaGAGACAGCCTGCTGGGAACCCAGGCACTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LFQSTLGPVDPE*RQPAGNPGTQG Trigger: TCCCTGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CAA 90 bp | GATTGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAGTGAAGACAGCCTGCTGGTCGGTCCACCTCCATaGTGGGGATGGAGAAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: DCSRAPWGLWTPSEDSLLVGPPP*WGWRRS Trigger: AGACCTTCTCCATCCCCACAATGGAGGTGGACCGAC...CAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| 3UTR CCA 72 bp | ACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTGTaGACCCCGAGTGAAGACAGCCTGCTGGGAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: TSSDCSRAPWGL*TPSEDSLLGTQ Trigger: CTGGGTTCCCAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CCA 72 bp | TGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTaGGGCCTGTGGACCCCGAGTGAAGACAGCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: WRATSSDCSRAP*GLWTPSEDSLL Trigger: CAGCAGGCTGTCTTCACTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CCA 72 bp | GACAGTCAGCCCACAACTGGCTTGAAAGGCAGCTCCTaGACAGTGGTGGGAAGAGCCCTCCGCAACAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: DSQPTTGLKGSS*TVVGRALRNRN Trigger: GTTCCTGTTGCGGAGGGCTCTTCCCACCACTGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTGACTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR TCA 72 bp | GTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTaGGCATCTTCTTCAGTCCCTTCTTCCCGGCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: VSCSRPPVYIRG*ASSSVPSSRLP Trigger: GGGGAGCCGGGAAGAAGGGACTGAAGAAGATGCTCAGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTCAGCCCACAACTGGCTaGAAAGGCAGCTCCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: KHLAGQFPAHGLLFTSEAQPTTG*KGSSWT Trigger: TGTCCAGGAGCTGCCTTTCAAGCCAGTTGTGGGCTG...AGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| 3UTR CCA 72 bp | AAGTCAACTTCAGTCGGTCCACCTCCATTGTGGGGATaGAGAAGGTCTGAAGGGCATTGGTGTCCTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: KSTSVGPPPLWG*RRSEGHWCPQG Trigger: ACCCTGAGGACACCAATGCCCTTCAGACCTTCTCCATCCCCACAATGGAGGTGGACCGACTGAAGTTGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| 3UTR CCA 72 bp | CCTCAAAAGTCAACTTCAGTCGGTCCACCTCCATTGTaGGGATGGAGAAGGTCTGAAGGGCATTGGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PQKSTSVGPPPL*GWRRSEGHWCP Trigger: AGGACACCAATGCCCTTCAGACCTTCTCCATCCCCACAATGGAGGTGGACCGACTGAAGTTGACTTTTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| CDS-3UTR CCA 90 bp | CCGAGTGAAGACAGCCTGCTGGGAACCCAGGCACTCAGGGACAGTCAGCCCACATCGAGTGACACCCACTaGGAGGGGCCCTGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PSEDSLLGTQALRDSQPTSSDTH*EGPWSE Trigger: CTCTGACCAGGGCCCCTCCCAGTGGGTGTCACTCGA...TGTGGGCTGACTGTCCCTGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR CCA 90 bp | CAACAGGTGATGGAGAGCCACATCCTCAGATTGTTCCAGAGCACCCTGGGGCCTCACTGGGAGGGGCCCTaGTCAGAGTTCCAGCACGTC | + |
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Preference number: 4 (lower is better) Translates to: QQVMESHILRLFQSTLGPHWEGP*SEFQHV Trigger: GACGTGCTGGAACTCTGACCAGGGCCCCTCCCAGTG...AGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCACCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCTGAGCATCTTCTTCAGTCCCTTCTTCCCGGCTCCCCCAGCTCACCCCTGGAGAAGCCACCCTaGAACTGCACCTGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SEAEHLLQSLLPGSPSSPLEKPP*NCTCSC Trigger: ACAGCTGCAGGTGCAGTTCCAGGGTGGCTTCTCCAG...GGGTGAGCTGGGGGAGCCGGGAAGAAGGGACTGAAGAAGATGCTCAGCCTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| 3UTR CAA 72 bp | ACAGTGCAACAGGTGATGGAGAGCCACATCCTCAGATaGTTCCAGAGCACCCTGGGGCCTGTGGACCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TVQQVMESHILR*FQSTLGPVDPE Trigger: CTCGGGGTCCACAGGCCCCAGGGTGCTCTGGAACAATCTGAGGATGTGGCTCTCCATCACCTGTTGCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS-3UTR TCA 90 bp | ACTCATGGTTCTGGAGGCAGAGAGAGCTACAATTCGGAGGGTGGGTGGGATACACTGGGGAAACTCGAGTaGCACCCACTGGGAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: THGSGGRESYNSEGGWDTLGKLE*HPLGGA Trigger: GGCCCCTCCCAGTGGGTGTCACTCGAGTTTCCCCAG...TGTATCCCACCCACCCTCCGAATTGTAGCTCTCTCTGCCTCCAGAACCATGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR TCA 90 bp | TTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCCCAGCAAGAACAGAAAAGCTGCCTCCCCACCCCGTaGACCTTCCAGGCAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LKQPILKVVSPAQQEQKSCLPTP*TFQAAV Trigger: CACAGCTGCCTGGAAGGTTCACGGGGTGGGGAGGCA...GCTTTTCTGTTCTTGCTGGGCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR CCA 90 bp | CTTGCCTTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCCCAGCAAGAACAGGGCAGCTGTGGCGACTaGAGAAGCCACCCTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LALKQPILKVVSPAQQEQGSCGD*RSHPGT Trigger: AGTTCCAGGGTGGCTTCTCCAGTCGCCACAGCTGCC...CTGTTCTTGCTGGGCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAAGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR TCA 90 bp | CAGGCAAACCTTGCCTTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCCCAGGGGATGGAGAAGGTCTaGAGGGCATTGGTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QANLALKQPILKVVSPAQGMEKV*RALVSS Trigger: TGAGGACACCAATGCCCTTCAGACCTTCTCCATCCC...CTGGGCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAAGGCAAGGTTTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR TCA 90 bp | GGACAGTTTCCTGCTCACGGCCTCCTGTTTACATCAGAGGCTGAGCATCTTCTTTGCAGCTGTGTGATCTaGACACACTGGGGAAACTCG | + |
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Preference number: 4 (lower is better) Translates to: GQFPAHGLLFTSEAEHLLCSCVI*THWGNS Trigger: CGAGTTTCCCCAGTGTGTTCAGATCACACAGCTGCA...AAGAAGATGCTCAGCCTCTGATGTAAACAGGAGGCCGTGAGCAGGAAACTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR GCA 90 bp | GAGACAGGCAAACCTTGCCTTAAAGCAACCTATTCTCAAGGTAGTGAGCCCAGCAAGCCACCCTGGAACTaGACCTGCAGCTGTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: ETGKPCLKATYSQGSEPSKPPWN*TCSCVI Trigger: GATCACACAGCTGCAGGTGCAGTTCCAGGGTGGCTT...GCTGGGCTCACTACCTTGAGAATAGGTTGCTTTAAGGCAAGGTTTGCCTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR CCA 90 bp | CCAGCAAGAACAGAAAAGCAGAAAAGCACTTGGCTGGACAGTTTCCTGCTCACGGGTCCACCTCCATTGTaGGGATGGAGAAGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PARTEKQKSTWLDSFLLTGPPPL*GWRRSE Trigger: TTCAGACCTTCTCCATCCCCACAATGGAGGTGGACC...CGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTCTTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| 3UTR CAA 72 bp | TGTCCTCAAAAGTCAACTTCAGTCGGTCCACCTCCATaGTGGGGATGGAGAAGGTCTGAAGGGCATTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CPQKSTSVGPPP*WGWRRSEGHWC Trigger: ACACCAATGCCCTTCAGACCTTCTCCATCCCCACAATGGAGGTGGACCGACTGAAGTTGACTTTTGAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211898.2 |
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| CDS CCA 90 bp | ATCTTGCTGAGTGCCTCCCCACCCCGTGAACCTTCCAGGCAGCTGTaGCGACTGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: ILLSASPPREPSRQL*RLEKPPWNCTCSCV Trigger: CACACAGCTGCAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCGCCACAGCTGCCTGGAAGGTTCACGGGGTGGGGAGGCACTCAGCAAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS TCA 90 bp | CGACTGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTGATCTaGACACACTGGGGAAACTCGAGTGACACCCACTGGGAGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RLEKPPWNCTCSCVI*THWGNSSDTHWEGP Trigger: GGGCCCCTCCCAGTGGGTGTCACTCGAGTTTCCCCAGTGTGTTCAGATCACACAGCTGCAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS TCA 90 bp | TGTGGCGACTGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTaGTCTGAACACACTGGGGAAACTCGAGTGACACCCACTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CGDWRSHPGTAPAAV*SEHTGETRVTPTGR Trigger: CCTCCCAGTGGGTGTCACTCGAGTTTCCCCAGTGTGTTCAGATCACACAGCTGCAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS TCA 90 bp | TCTGAAGGGCATTGGTGTCCTCAGGGTAGAAATCTACAATCTTGCTaGGTGCCTCCCCACCCCGTGAACCTTCCAGGCAGCTGTGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: SEGHWCPQGRNLQSC*VPPHPVNLPGSCGD Trigger: GTCGCCACAGCTGCCTGGAAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATTGTAGATTTCTACCCTGAGGACACCAATGCCCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS-3UTR CAA 90 bp | CCGAGTGAAGACAGCCTGCTGGGAACCCAGGCACTCAGGGACAGTCAGCCCACAATGTTTCTTTCCAAATaGCCGGCTGTTGCGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: PSEDSLLGTQALRDSQPTMFLSK*PAVAIE Trigger: CTCAATCGCAACAGCCGGCAATTTGGAAAGAAACAT...TGTGGGCTGACTGTCCCTGAGTGCCTGGGTTCCCAGCAGGCTGTCTTCACTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAACCAATAAATCTGTGCAGAACTTGAAGGTCTTCAGGGTGCCTCCCAGGGTCGGTCCACCTCCATaGTGGGGATGGAGAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: TGTNKSVQNLKVFRVPPRVGPPP*WGWRRS Trigger: AGACCTTCTCCATCCCCACAATGGAGGTGGACCGAC...CCTGGGAGGCACCCTGAAGACCTTCAAGTTCTGCACAGATTTATTGGTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS GCA 90 bp | CAGCACGTCTCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATTaGCGGCTGTTGCGATTGAGCACAGAACTGACCCTGCTCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: QHVSSSWSKRCFFPN*RLLRLSTELTLLTV Trigger: CACTGTGAGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGATGAAGAGACGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS-3UTR CAA 90 bp | GAACAGAAAAGCAGAAAAGCACTTGGCTGGACAGTTTCCTGCTCACGGCCTCCTATGTTTCTTTCCAAATaGCCGGCTGTTGCGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: EQKSRKALGWTVSCSRPPMFLSK*PAVAIE Trigger: CTCAATCGCAACAGCCGGCAATTTGGAAAGAAACAT...AGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGCTTTTCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS CCA 72 bp | CCCCACCCCGTGAACCTTCCAGGCAGCTGTGGCGACTaGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PHPVNLPGSCGD*RSHPGTAPAAV Trigger: CACAGCTGCAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCGCCACAGCTGCCTGGAAGGTTCACGGGGTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS CCA 72 bp | AGTGCCTCCCCACCCCGTGAACCTTCCAGGCAGCTGTaGCGACTGGAGAAGCCACCCTGGAACTGCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SASPPREPSRQL*RLEKPPWNCTC Trigger: GCAGGTGCAGTTCCAGGGTGGCTTCTCCAGTCGCCACAGCTGCCTGGAAGGTTCACGGGGTGGGGAGGCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS TCA 72 bp | CAGCTGTGTGATCTGAACACACTGGGGAAACTCGAGTaGCACCCACTGGGAGGGGCCCTGGTCAGAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QLCDLNTLGKLE*HPLGGALVRVP Trigger: TGGAACTCTGACCAGGGCCCCTCCCAGTGGGTGTCACTCGAGTTTCCCCAGTGTGTTCAGATCACACAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS TCA 72 bp | TGGAGAAGCCACCCTGGAACTGCACCTGCAGCTGTGTaGTCTGAACACACTGGGGAAACTCGAGTGACACCC | + |
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Preference number: 6 (lower is better) Translates to: WRSHPGTAPAAV*SEHTGETRVTP Trigger: GGGTGTCACTCGAGTTTCCCCAGTGTGTTCAGATCACACAGCTGCAGGTGCAGTTCCAGGGTGGCTTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS TCA 72 bp | CATTGGTGTCCTCAGGGTAGAAATCTACAATCTTGCTaGGTGCCTCCCCACCCCGTGAACCTTCCAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HWCPQGRNLQSC*VPPHPVNLPGS Trigger: GCTGCCTGGAAGGTTCACGGGGTGGGGAGGCACTCAGCAAGATTGTAGATTTCTACCCTGAGGACACCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095273.7 |
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| CDS CAA 90 bp | CCAGCACGTCTCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATaGCCGGCTGTTGCGATTGAGCACAGAACTGACCCTGCTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: PARLFILVKKMFLSK*PAVAIEHRTDPAHS Trigger: ACTGTGAGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGATGAAGAGACGTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS CAA 72 bp | AAAAGATGTTTCTTTCCAAATTGCCGGCTGTTGCGATaGAGCACAGAACTGACCCTGCTCACAGTGTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: KRCFFPNCRLLR*STELTLLTVSG Trigger: TCCGGACACTGTGAGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS CAA 90 bp | TCCTGGTCAAAAAGATGTTTCTTTCCAAATTGCCGGCTGTTGCGATaGAGCACAGAACTGACCCTGCTCACAGTGTCCGGACAAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: SWSKRCFFPNCRLLR*STELTLLTVSGQTK Trigger: TTTGGTTTGTCCGGACACTGTGAGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS CAA 90 bp | TCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATTGCCGGCTGTaGCGATTGAGCACAGAACTGACCCTGCTCACAGTGTCCGGACAA | + |
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Preference number: 6 (lower is better) Translates to: SSSWSKRCFFPNCRL*RLSTELTLLTVSGQ Trigger: TTGTCCGGACACTGTGAGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGATGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS CAA 72 bp | TGGTCAAAAAGATGTTTCTTTCCAAATTGCCGGCTGTaGCGATTGAGCACAGAACTGACCCTGCTCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: WSKRCFFPNCRL*RLSTELTLLTV Trigger: CACTGTGAGCAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS GCA 72 bp | TCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATTaGCGGCTGTTGCGATTGAGCACAGAACTGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSWSKRCFFPN*RLLRLSTELTL Trigger: CAGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGATGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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| CDS CAA 72 bp | CTCTTCATCCTGGTCAAAAAGATGTTTCTTTCCAAATaGCCGGCTGTTGCGATTGAGCACAGAACTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: LFILVKKMFLSK*PAVAIEHRTDP Trigger: AGGGTCAGTTCTGTGCTCAATCGCAACAGCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGATGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095273.7 ENSMUST00000211898.2 |
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