RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR2C2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005893

Ensembl transcript IDs: ENSMUST00000113460.8, ENSMUST00000113463.8, ENSMUST00000146175.2

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCATCCAAGCCAGATGCCTGCTCACTGTGGCCACGAGCAGTCTCTaGCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAA +
Preference number: 1 (lower is better)
Translates to: FIQARCLLTVATSSL*QAGPCLPSPHLSPK
Trigger: TTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp CTGTGGGTCAGGCAAATTTTTGCACTTGGCTTCATCCAAGCCAGATaGCTGCTCACTGTGGCCACGAGCAGTCTCTGCCAAGCTGGGCCC +
Preference number: 1 (lower is better)
Translates to: LWVRQIFALGFIQAR*LLTVATSSLCQAGP
Trigger: GGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTTGCCTGACCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 90 bp AGCCAGATGCCTGCTCACTGTGGCCACGAGCAGTCTCTGCCAAGCTaGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAAAATCCCAAT +
Preference number: 1 (lower is better)
Translates to: SQMPAHCGHEQSLPS*ALSPKSTSQPKNPN
Trigger: ATTGGGATTTTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp GGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTaGACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTT +
Preference number: 1 (lower is better)
Translates to: GDTCAHQDTATLPFP*TCTVLGGIPLLAAV
Trigger: AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 90 bp AACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTaGGCCACACGAAGCTCCAGCTTTGGAGCCTTTGAAGAAGACCAA +
Preference number: 1 (lower is better)
Translates to: NKGDCCSPWIPNAHV*ATRSSSFGAFEEDQ
Trigger: TTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp TCTGGGATGAACAGGAAGAAGTGGCTGACACACTGGAGACACCTGTaGACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGCAC +
Preference number: 1 (lower is better)
Translates to: SGMNRKKWLTHWRHL*TPRHCYTSLPLHLH
Trigger: GTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAGCCACTTCTTCCTGTTCATCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 90 bp AAGAAGTGGCTGACACACTGGAGACACCTGTGCACACCAAGACACTaGTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCAT +
Preference number: 1 (lower is better)
Translates to: KKWLTHWRHLCTPRH*YTSLPLHLHSSRRH
Trigger: ATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAGCCACTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 90 bp CTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTaGAGTCAACCACCTTGCACTCTGGTCAAAGGCTCCAGTTCCTAC +
Preference number: 1 (lower is better)
Translates to: LQKPHSTWTTGHVKG*SQPPCTLVKGSSSY
Trigger: GTAGGAACTGGAGCCTTTGACCAGAGTGCAAGGTGGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 90 bp AAGACACCACAACCCCAACTGCAGCCTCAGAAAGAGAAGAGGCAGTaGAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGAC +
Preference number: 1 (lower is better)
Translates to: KTPQPQLQPQKEKRQ*RASSTHTANWKDSD
Trigger: GTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTGAAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTGGGGTTGTGGTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp AGATACTGGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTaGAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGT +
Preference number: 1 (lower is better)
Translates to: RYWPLSTCTRNRNSH*RSHTQPGQQVMSKG
Trigger: ACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCCAGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 90 bp AAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTTaGAGAAGACCAAGGGTCTCAGTCACCAAGCTCCTTCCAGTTATG +
Preference number: 1 (lower is better)
Translates to: KCPCLSHTKLQLWSL*RRPRVSVTKLLPVM
Trigger: CATAACTGGAAGGAGCTTGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp TCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCACCTTaGACTCTGGTCAAAGGCTCCAGTTCCTACAAGTTGGTAGAGGGA +
Preference number: 1 (lower is better)
Translates to: STWTTGHVKGCSQPP*TLVKGSSSYKLVEG
Trigger: TCCCTCTACCAACTTGTAGGAACTGGAGCCTTTGACCAGAGTGCAAGGTGGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 90 bp GGAGTATCACAGACTCATAAATCAAGGGTGGAAAGCCCTGAAAGCTaGAGCCCAGAAGCAACTGGGGCTGACCTTCATAGGTCATTCGAC +
Preference number: 1 (lower is better)
Translates to: GVSQTHKSRVESPES*SPEATGADLHRSFD
Trigger: GTCGAATGACCTATGAAGGTCAGCCCCAGTTGCTTCTGGGCTTCAGCTTTCAGGGCTTTCCACCCTTGATTTATGAGTCTGTGATACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp GCTAACATCTCTTGCAGCTTCTGGGCCCTTGTAAATTTAGAGAACTaGCCTCCTATCTGGACTTTTCTGGCTCGAGGCTTCCTTGTGCAG +
Preference number: 1 (lower is better)
Translates to: ANISCSFWALVNLEN*PPIWTFLARGFLVQ
Trigger: CTGCACAAGGAAGCCTCGAGCCAGAAAAGTCCAGATAGGAGGGCAGTTCTCTAAATTTACAAGGGCCCAGAAGCTGCAAGAGATGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 90 bp TGCAGCTTCTGGGCCCTTGTAAATTTAGAGAACTGCCCTCCTATCTaGACTTTTCTGGCTCGAGGCTTCCTTGTGCAGGAATTAGTGCCA +
Preference number: 1 (lower is better)
Translates to: CSFWALVNLENCPPI*TFLARGFLVQELVP
Trigger: TGGCACTAATTCCTGCACAAGGAAGCCTCGAGCCAGAAAAGTCCAGATAGGAGGGCAGTTCTCTAAATTTACAAGGGCCCAGAAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 90 bp CTCAGCCTCCCAAGTGCTGGGGTTACAGGCCTGCACTATGTGCCCTaGCTGAGGATTATTTTTGGATTCTCTTTCAGAGAGAAGATGATC +
Preference number: 1 (lower is better)
Translates to: LSLPSAGVTGLHYVP*LRIIFGFSFREKMI
Trigger: GATCATCTTCTCTCTGAAAGAGAATCCAAAAATAATCCTCAGTCAGGGCACATAGTGCAGGCCTGTAACCCCAGCACTTGGGAGGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 90 bp GGACAGGTTGTGCACAGAAAGTACACACTGATGGGAGGCACTCAATaGGGAGGTCCAGAACCTTGTACAAAACACCTAGGTCAACCTCAT +
Preference number: 1 (lower is better)
Translates to: GQVVHRKYTLMGGTQ*GGPEPCTKHLGQPH
Trigger: ATGAGGTTGACCTAGGTGTTTTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCTGTGCACAACCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp TTACTTCAAAAACACAAAGAGCAACCTGTGGGTCAGGCAAATTTTTaGACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: LLQKHKEQPVGQANF*TWLHPSQMPAHCGH
Trigger: GTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTTGCCTGACCCACAGGTTGCTCTTTGTGTTTTTGAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 90 bp ATTGGCCTTCAAAGTATAATTCTTGTGCCTCAGCCTCCCAAGTGCTaGGGTTACAGGCCTGCACTATGTGCCCTGACTGAGGATTATTTT +
Preference number: 1 (lower is better)
Translates to: IGLQSIILVPQPPKC*GYRPALCALTEDYF
Trigger: AAAATAATCCTCAGTCAGGGCACATAGTGCAGGCCTGTAACCCCAGCACTTGGGAGGCTGAGGCACAAGAATTATACTTTGAAGGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 90 bp ACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCTaGGATGAACAGGAAGAAGTGGCTGACACACTGGAGACACCTGTG +
Preference number: 1 (lower is better)
Translates to: TFLRAGKSSSLVAIV*DEQEEVADTLETPV
Trigger: CACAGGTGTCTCCAGTGTGTCAGCCACTTCTTCCTGTTCATCCCAGACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 90 bp GCACCACCACTGCACACAGCTAGAAGTGCTGCCCTCTTACAAATGTaGACGATTGTCTCCTGTACCCTAGTGAATTTTCACAGAAATCAT +
Preference number: 1 (lower is better)
Translates to: APPLHTARSAALLQM*TIVSCTLVNFHRNH
Trigger: ATGATTTCTGTGAAAATTCACTAGGGTACAGGAGACAATCGTTCACATTTGTAAGAGGGCAGCACTTCTAGCTGTGTGCAGTGGTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 90 bp AGCAGCTCTTATTGGGTCACTGCAAGTTATATCCCCTGCACACAATaGCAGGAATCCACATTTTACTCACAGGAATTTAGCGTAGCACCA +
Preference number: 1 (lower is better)
Translates to: SSSYWVTASYIPCTQ*QESTFYSQEFSVAP
Trigger: TGGTGCTACGCTAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAACTTGCAGTGACCCAATAAGAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 90 bp TGCTGGCATAGCAGCTCTTATTGGGTCACTGCAAGTTATATCCCCTaGACACAATGCCAGGAATCCACATTTTACTCACAGGAATTTAGC +
Preference number: 1 (lower is better)
Translates to: CWHSSSYWVTASYIP*TQCQESTFYSQEFS
Trigger: GCTAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAACTTGCAGTGACCCAATAAGAGCTGCTATGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 90 bp GGCAGCTCCCTGTCTAAGGAAAATGAAGTTGGTAAGAAACTCACCTaGACAACGTTCCTGTTAAGGGAACCTTGCAACCCCAATATCTAT +
Preference number: 1 (lower is better)
Translates to: GSSLSKENEVGKKLT*TTFLLREPCNPNIY
Trigger: ATAGATATTGGGGTTGCAAGGTTCCCTTAACAGGAACGTTGTGCAGGTGAGTTTCTTACCAACTTCATTTTCCTTAGACAGGGAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp TCACTTGAATTTCATTATAGAAACTCAAGACACCACAACCCCAACTaGAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTCAACAC +
Preference number: 1 (lower is better)
Translates to: SLEFHYRNSRHHNPN*SLRKRRGSEEPLQH
Trigger: GTGTTGAAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTGGGGTTGTGGTGTCTTGAGTTTCTATAATGAAATTCAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 90 bp CAACACACACTGCAAACTGGAAGGACAGCGACACATTGTAACATTTaGGGAGTAACTAGGATGACTTGCTTAAGGAATTTGGTCTCTGTC +
Preference number: 1 (lower is better)
Translates to: QHTLQTGRTATHCNI*GVTRMTCLRNLVSV
Trigger: GACAGAGACCAAATTCCTTAAGCAAGTCATCCTAGTTACTCCTCAAATGTTACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 90 bp ACCAAGCTTCCCTGTGTTTTACTTGGAAAGCCACTTTTAATAGTGTaGTTGTCACAACAGGCAATGACACAGGCAAGATTGAACAACCAC +
Preference number: 1 (lower is better)
Translates to: TKLPCVLLGKPLLIV*LSQQAMTQARLNNH
Trigger: GTGGTTGTTCAATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCCAAGTAAAACACAGGGAAGCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 90 bp GCTGGCAAAATTATGTCCTTTCCATCATTTTATACTGGCAATCCCTaGTGTTCTCCAACACTGGCTTCCAAATCTAGCTGGGAATTTAGA +
Preference number: 1 (lower is better)
Translates to: AGKIMSFPSFYTGNP*CSPTLASKSSWEFR
Trigger: TCTAAATTCCCAGCTAGATTTGGAAGCCAGTGTTGGAGAACAGCAGGGATTGCCAGTATAAAATGATGGAAAGGACATAATTTTGCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 90 bp TGGAAGGATTCATTTAGGGACTACCAAGCTTCCCTGTGTTTTACTTaGAAAGCCACTTTTAATAGTGTGATTGTCACAACAGGCAATGAC +
Preference number: 1 (lower is better)
Translates to: WKDSFRDYQASLCFT*KATFNSVIVTTGND
Trigger: GTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCCAAGTAAAACACAGGGAAGCTTGGTAGTCCCTAAATGAATCCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp CAAGGCCTGGATCTAGAATTTCAGCAGCACCAACAGCCCCGCTGCACCCAGCCACCTCAGCCTCCCAAGTaGTGGGGTTACAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: QGLDLEFQQHQQPRCTQPPQPPK*WGYRPA
Trigger: TGCAGGCCTGTAACCCCAGCACTTGGGAGGCTGAGG...TGGCTGGGTGCAGCGGGGCTGTTGGTGCTGCTGAAATTCTAGATCCAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 90 bp TGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTaGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: WRHLCTPRHCYTSLP*HLHSSRRHPTVGSC
Trigger: ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR TCA 90 bp GGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTGCAGAAGCCACACTCACAGGAAGAAGTGGCTaGCACACTGGAGACACCTGT +
Preference number: 2 (lower is better)
Translates to: GPSPHAPGIGTLTAEATLTGRSG*HTGDTC
Trigger: ACAGGTGTCTCCAGTGTGTCAGCCACTTCTTCCTGT...GAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR CCA 90 bp GGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTGCAGAAGCCACACTCGTGGAGCCCATGTTCTaGAAGAGTCTGCAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: GPSPHAPGIGTLTAEATLVEPMF*KSLQKG
Trigger: GCCTTTCTGCAGACTCTTCCAGAACATGGGCTCCAC...GAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR CAA 90 bp AGTGGAGCCCATGTTCTGGAAGAGTCTGCAGAAAGGCATCAGGGATaGGGACCAACCATGAGGGTAAGGACCCTGACAGGCTATCTCTGC +
Preference number: 2 (lower is better)
Translates to: SGAHVLEESAERHQG*GPTMRVRTLTGYLC
Trigger: GCAGAGATAGCCTGTCAGGGTCCTTACCCTCATGGTTGGTCCCAATCCCTGATGCCTTTCTGCAGACTCTTCCAGAACATGGGCTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR CAA 90 bp CCTGGATCCCAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTaGGAGCCTTTGAAGAAGACCAAGGGTCTCAGTCACCAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: PGSQMPMSEPHEAPA*EPLKKTKGLSHQAP
Trigger: AGGAGCTTGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp GGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTGCAGAAGCCACACTCTGCACACCAAGACACTaGTACACTTCCCTTCCCTTG +
Preference number: 2 (lower is better)
Translates to: GPSPHAPGIGTLTAEATLCTPRH*YTSLPL
Trigger: CAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCA...GAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR TCA 90 bp CTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGACAGGAAGAAGTGGCTaGCACACTGGAGACACCTGT +
Preference number: 2 (lower is better)
Translates to: LTAEATLNLDNRSCQRVQTGRSG*HTGDTC
Trigger: ACAGGTGTCTCCAGTGTGTCAGCCACTTCTTCCTGT...CTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR GCA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCACACTTCCCTTCCCTTaGACCTGCACAGTTCTAGGA +
Preference number: 2 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTTLPFP*TCTVLG
Trigger: TCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGT...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR GCA 90 bp CAAGGCCTGGATCTAGAATTTCAGCAGCACCAACAGCCCCGCTGCACCCAGCCATGTTCTGGAAGAGTCTaGAGAAAGGCATCAGGGATT +
Preference number: 2 (lower is better)
Translates to: QGLDLEFQQHQQPRCTQPCSGRV*RKASGI
Trigger: AATCCCTGATGCCTTTCTGCAGACTCTTCCAGAACA...TGGCTGGGTGCAGCGGGGCTGTTGGTGCTGCTGAAATTCTAGATCCAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp GCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCTGGCCCCTCTCCACATaGACCAGGAATAGGAACTCT +
Preference number: 2 (lower is better)
Translates to: AEATLNLDNRSCQRVQSTWPLST*TRNRNS
Trigger: AGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCCA...GGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR CAA 90 bp CTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCACCTaGCACTCTGGTCAAAGGCTCCAGTTCCTACAAGTTGGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: LNLDNRSCQRVQSTT*HSGQRLQFLQVGRG
Trigger: CCCTCTACCAACTTGTAGGAACTGGAGCCTTTGACCAGAGTGCAAGGTGGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR GCA 90 bp ACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCATGGCCCCTCTCCACATaGACCAGGAATAGGAACTCT +
Preference number: 2 (lower is better)
Translates to: TAEATLNLDNRSCQRVQSWPLST*TRNRNS
Trigger: AGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCCA...TGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR CCA 90 bp GGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGAAAAAGCTGTTCTCCAACACTaGCTTCCAAATCTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GKGKRWASVLPGPSPWEKAVLQH*LPNLAG
Trigger: CCCAGCTAGATTTGGAAGCCAGTGTTGGAGAACAGC...TTTTTCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 90 bp CAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTaGAAGAAGACCAAGGGTCTCAGTCACCAAGCTCCTTCCAGTTAT +
Preference number: 2 (lower is better)
Translates to: QMPMSEPHEAPALEP*KKTKGLSHQAPSSY
Trigger: ATAACTGGAAGGAGCTTGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR TCA 90 bp GGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGAAAAAAAAGAGAAGAGGCAGTaGAGAGCCTCTTCAACACAC +
Preference number: 2 (lower is better)
Translates to: GKGKRWASVLPGPSPWEKKEKRQ*RASSTH
Trigger: GTGTGTTGAAGAGGCTCTTCACTGCCTCTTCTCTTT...TTTTTCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCC
51% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp CAGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATGATCAGATACTGATCCCCTGCACACAATaGCAGGAATCCACATTTTAC +
Preference number: 2 (lower is better)
Translates to: QRGYTTPTQLQVLNDQILIPCTQ*QESTFY
Trigger: GTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGAT...CAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR CCA 90 bp GCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCAAGCCACACTCAACCTaGACAACAGGTCATGTCAAA +
Preference number: 2 (lower is better)
Translates to: AEATLNLDNRSCQRVQSTKPHST*TTGHVK
Trigger: TTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTT...GGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR CAA 90 bp TTTACTTCAAAAACACAAAGAGCAACCTGTGGGTCAGGCAAATTTTaGCACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: FTSKTQRATCGSGKF*HLASSKPDACSLWP
Trigger: TGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTTGCCTGACCCACAGGTTGCTCTTTGTGTTTTTGAAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp TTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGCTCTTATTGGGTCACTaGAAGTTATATCCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: FSVIGDRQRKEVGICLTRLLLGH*KLYPLH
Trigger: GTGCAGGGGATATAACTTGCAGTGACCCAATAAGAG...CCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCCTATCTCCAATTACGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp CACCACAACCCCAACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTGTAACTAGGATGACTTaGTTAAGGAATTTGGTCTCT +
Preference number: 2 (lower is better)
Translates to: HHNPNCSLRKRRGSEEPLVTRMT*LRNLVS
Trigger: AGAGACCAAATTCCTTAAGCAAGTCATCCTAGTTAC...AAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTGGGGTTGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CCA 90 bp ACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCACATAGCAGCTCTTATTaGGTCACTGCAAGTTATATC +
Preference number: 2 (lower is better)
Translates to: TAEATLNLDNRSCQRVQSHSSSY*VTASYI
Trigger: GATATAACTTGCAGTGACCCAATAAGAGCTGCTATG...TGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR GCA 90 bp CACCACAACCCCAACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTGGCATTCTGACAAGCTaGAATCTAATTCTGAAAATT +
Preference number: 2 (lower is better)
Translates to: HHNPNCSLRKRRGSEEPLGILTS*NLILKI
Trigger: AATTTTCAGAATTAGATTGCAGCTTGTCAGAATGCC...AAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTGGGGTTGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CCA 90 bp GTTATATCCCCTGCACACAATGCCAGGAATCCACATTTTACTCACAGGAATTTAGTGGAGCCCATGTTCTaGAAGAGTCTGCAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: VISPAHNARNPHFTHRNLVEPMF*KSLQKG
Trigger: GCCTTTCTGCAGACTCTTCCAGAACATGGGCTCCAC...TAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR GCA 90 bp CTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAAGGATGTAAGGAATTATaGTGTCTATTGAAACATTGC +
Preference number: 2 (lower is better)
Translates to: LQKPHSTWTTGHVKGCSQGCKEL*CLLKHC
Trigger: GCAATGTTTCAATAGACAGCATAATTCCTTACATCC...TTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
3UTR-3UTR CCA 90 bp TTTTCCCAGTCTCCTGTCCATAGGAATGCAAAGAGCTTTAAGTCAGATCTAACTAACCACCTTGCACTCTaGTCAAAGGCTCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: FSQSPVHRNAKSFKSDLTNHLAL*SKAPVP
Trigger: AGGAACTGGAGCCTTTGACCAGAGTGCAAGGTGGTT...AGTTAGATCTGACTTAAAGCTCTTTGCATTCCTATGGACAGGAGACTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp TCACCAAAAGGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTCACTGGAGACACCTGTaGACACCAAGACACTGCTAC +
Preference number: 2 (lower is better)
Translates to: SPKGVKTFLRAGKSSSLVHWRHL*TPRHCY
Trigger: GTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTG...AACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACCTTTTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR CCA 90 bp TTTTATATAGTGTGGATGCTGCTGCTCCATTTGAAAGCCATACTGACCACCCTGTGTACTTTCAGTCACTaGAAGAATTACAGGACCCTT +
Preference number: 2 (lower is better)
Translates to: FYIVWMLLLHLKAILTTLCTFSH*KNYRTL
Trigger: AAGGGTCCTGTAATTCTTCCAGTGACTGAAAGTACA...CAGGGTGGTCAGTATGGCTTTCAAATGGAGCAGCAGCATCCACACTATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR GCA 90 bp TTTTCCCAGTCTCCTGTCCATAGGAATGCAAAGAGCTTTAAGTCAGATCTAACTTTTTGTTATCTCAAATaGCCCAGAGAGCTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: FSQSPVHRNAKSFKSDLTFCYLK*PRELCW
Trigger: CCAACAAAGCTCTCTGGGGCATTTGAGATAACAAAA...AGTTAGATCTGACTTAAAGCTCTTTGCATTCCTATGGACAGGAGACTGGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR TCA 90 bp CCATCCACATCTAATACTGACACTGACAAACTAGAAAACCATTCCAAGGGCATAACACATTGTAACATTTaGGGAGTAACTAGGATGACT +
Preference number: 2 (lower is better)
Translates to: PSTSNTDTDKLENHSKGITHCNI*GVTRMT
Trigger: AGTCATCCTAGTTACTCCTCAAATGTTACAATGTGT...TATGCCCTTGGAATGGTTTTCTAGTTTGTCAGTGTCAGTATTAGATGTGGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CCA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCTTAGTTGCTATTGTCTaGGATGAACAGGAAGAAGTG +
Preference number: 2 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVLVAIV*DEQEEV
Trigger: CACTTCTTCCTGTTCATCCCAGACAATAGCAACTAA...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR CAA 90 bp GGTCCAGAACCTTGTACAAAACACCTAGGTCAACCTCATCTCATTTaGGAGTTGTCTTTAGAAATTGACATAAGAGTTAAGACTTTTTGC +
Preference number: 2 (lower is better)
Translates to: GPEPCTKHLGQPHLI*ELSLEIDIRVKTFC
Trigger: GCAAAAAGTCTTAACTCTTATGTCAATTTCTAAAGACAACTCCAAAATGAGATGAGGTTGACCTAGGTGTTTTGTACAAGGTTCTGGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 90 bp CCTGTCCATAGGAATGCAAAGAGCTTTAAGTCAGATCTAACTTCCTaGGAACTGAATTCTGTATTCTTTCTTGTTGGAAACTATAGTCAT +
Preference number: 2 (lower is better)
Translates to: PVHRNAKSFKSDLTS*ELNSVFFLVGNYSH
Trigger: ATGACTATAGTTTCCAACAAGAAAGAATACAGAATTCAGTTCCAAGGAAGTTAGATCTGACTTAAAGCTCTTTGCATTCCTATGGACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 90 bp AAGTTTGAAATGATTTCAGTTAATGAGAACATTGTATGGATACAATaGTTAAAGGTAAGGCCACAACGATCTGGACAACCAGTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KFEMISVNENIVWIQ*LKVRPQRSGQPVKE
Trigger: CTCCTTCACTGGTTGTCCAGATCGTTGTGGCCTTACCTTTAACAATTGTATCCATACAATGTTCTCATTAACTGAAATCATTTCAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp GCCAGATGCCTGCTCACTGTGGCCACGAGCAGTCTCTaGCAAGCTGGGCCCTGTCTCCCAAGTCCACATCTC +
Preference number: 3 (lower is better)
Translates to: ARCLLTVATSSL*QAGPCLPSPHL
Trigger: GAGATGTGGACTTGGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 72 bp CCTGCTCACTGTGGCCACGAGCAGTCTCTGCCAAGCTaGGCCCTGTCTCCCAAGTCCACATCTCAGCCCAAA +
Preference number: 3 (lower is better)
Translates to: PAHCGHEQSLPS*ALSPKSTSQPK
Trigger: TTTGGGCTGAGATGTGGACTTGGGAGACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 72 bp CACTTGGCTTCATCCAAGCCAGATGCCTGCTCACTGTaGCCACGAGCAGTCTCTGCCAAGCTGGGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: HLASSKPDACSL*PRAVSAKLGPV
Trigger: GACAGGGCCCAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp AGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTaGATGATCAGATACTGGCCCCTCTCCACATGCACC +
Preference number: 3 (lower is better)
Translates to: SEDTQPPPSCRF*MIRYWPLSTCT
Trigger: GGTGCATGTGGAGAGGGGCCAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 72 bp GACTGCTGCAGCCCCTGGATCCCAAATGCCCATGTCTaGGCCACACGAAGCTCCAGCTTTGGAGCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: DCCSPWIPNAHV*ATRSSSFGAFE
Trigger: TTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp AAACAAGGGAGACTGCTGCAGCCCCTGGATCCCAAATaGCCATGTCTGAGCCACACGAAGCTCCAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: KQGRLLQPLDPK*PCLSHTKLQLW
Trigger: CCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTGGGATCCAGGGGCTGCAGCAGTCTCCCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp AGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATaGTCAGATACTGGCCCCTCTCCACATGCACCAGGA +
Preference number: 3 (lower is better)
Translates to: RIHNPHPAAGSE*SDTGPSPHAPG
Trigger: TCCTGGTGCATGTGGAGAGGGGCCAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 72 bp CTGGATCTAGAATTTCAGCAGCACCAACAGCCCCGCTaGACCCAGCCACTGGAAAGCAGCAACAGTCTTCCA +
Preference number: 3 (lower is better)
Translates to: LDLEFQQHQQPR*TQPLESSNSLP
Trigger: TGGAAGACTGTTGCTGCTTTCCAGTGGCTGGGTGCAGCGGGGCTGTTGGTGCTGCTGAAATTCTAGATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp TGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTaGACCTGCACAGTTCTAGGAGGCATCCCACTGTTG +
Preference number: 3 (lower is better)
Translates to: CAHQDTATLPFP*TCTVLGGIPLL
Trigger: CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 72 bp CTGACACACTGGAGACACCTGTGCACACCAAGACACTaGTACACTTCCCTTCCCTTGCACCTGCACAGTTCT +
Preference number: 3 (lower is better)
Translates to: LTHWRHLCTPRH*YTSLPLHLHSS
Trigger: AGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 72 bp CCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTaGAGTCAACCACCTTGCACTCTGGTCAAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: PHSTWTTGHVKG*SQPPCTLVKGS
Trigger: GGAGCCTTTGACCAGAGTGCAAGGTGGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 72 bp CCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTaGAGAAGCCACACTCAACCTGGACAACAGGTCATG +
Preference number: 3 (lower is better)
Translates to: PLSTCTRNRNSH*RSHTQPGQQVM
Trigger: CATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR-3UTR CAA 90 bp GGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGAAAAATACACTTCCCTTCCCTaGCACCTGCACAGTTCTAGG +
Preference number: 3 (lower is better)
Translates to: GKGKRWASVLPGPSPWEKYTSLP*HLHSSR
Trigger: CCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA...TTTTTCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp TGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTTaGAGAAGACCAAGGGTCTCAGTCACCAAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: CLSHTKLQLWSL*RRPRVSVTKLL
Trigger: AAGGAGCTTGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp GCAATGACACAGGCAAGATTGAACAACCACAAAGGGTaGGGCCAGGGACACGAGTGGGAAGCTGAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: AMTQARLNNHKG*GQGHEWEAEAK
Trigger: TTTGGCTTCAGCTTCCCACTCGTGTCCCTGGCCTCACCCTTTGTGGTTGTTCAATCTTGCCTGTGTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp AAATTTTTGCACTTGGCTTCATCCAAGCCAGATGCCTaGTCACTGTGGCCACGAGCAGTCTCTGCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: KFLHLASSKPDA*SLWPRAVSAKL
Trigger: CAGCTTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp AGGCAAATTTTTGCACTTGGCTTCATCCAAGCCAGATaGCTGCTCACTGTGGCCACGAGCAGTCTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: RQIFALGFIQAR*LLTVATSSLCQ
Trigger: TTGGCAGAGACTGCTCGTGGCCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CAA 90 bp ACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAGAAAGGCATCAGGGATaGGGACCAACCATGAGGGTA +
Preference number: 3 (lower is better)
Translates to: TAEATLNLDNRSCQRVQSERHQG*GPTMRV
Trigger: TACCCTCATGGTTGGTCCCAATCCCTGATGCCTTTC...TGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 72 bp CAGACTCATAAATCAAGGGTGGAAAGCCCTGAAAGCTaGAGCCCAGAAGCAACTGGGGCTGACCTTCATAGG +
Preference number: 3 (lower is better)
Translates to: QTHKSRVESPES*SPEATGADLHR
Trigger: CCTATGAAGGTCAGCCCCAGTTGCTTCTGGGCTTCAGCTTTCAGGGCTTTCCACCCTTGATTTATGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CAA 90 bp AGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTATGGAACCCAAGACCTaGTGCATGCTAGGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: SEEPLQHTLQTGRTATHCMEPKT*CMLGKH
Trigger: GTGCTTGCCTAGCATGCACAAGGTCTTGGGTTCCAT...ACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTGAAGAGGCTCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CCA 72 bp CTGACAGGCTATCTCTGCTGGCATAGCAGCTCTTATTaGGTCACTGCAAGTTATATCCCCTGCACACAATGC +
Preference number: 3 (lower is better)
Translates to: LTGYLCWHSSSY*VTASYIPCTQC
Trigger: GCATTGTGTGCAGGGGATATAACTTGCAGTGACCCAATAAGAGCTGCTATGCCAGCAGAGATAGCCTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 72 bp GTGCACAGAAAGTACACACTGATGGGAGGCACTCAATaGGGAGGTCCAGAACCTTGTACAAAACACCTAGGT +
Preference number: 3 (lower is better)
Translates to: VHRKYTLMGGTQ*GGPEPCTKHLG
Trigger: ACCTAGGTGTTTTGTACAAGGTTCTGGACCTCCTCATTGAGTGCCTCCCATCAGTGTGTACTTTCTGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp CTGCACACAGCTAGAAGTGCTGCCCTCTTACAAATGTaGACGATTGTCTCCTGTACCCTAGTGAATTTTCAC +
Preference number: 3 (lower is better)
Translates to: LHTARSAALLQM*TIVSCTLVNFH
Trigger: GTGAAAATTCACTAGGGTACAGGAGACAATCGTTCACATTTGTAAGAGGGCAGCACTTCTAGCTGTGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR GCA 72 bp AGAGAAGAGGCAGTGAAGAGCCTCTTCAACACACACTaGAAACTGGAAGGACAGCGACACATTGTAACATTT +
Preference number: 3 (lower is better)
Translates to: REEAVKSLFNTH*KLEGQRHIVTF
Trigger: AAATGTTACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTGAAGAGGCTCTTCACTGCCTCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp TTTCATTATAGAAACTCAAGACACCACAACCCCAACTaGAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCT +
Preference number: 3 (lower is better)
Translates to: FHYRNSRHHNPN*SLRKRRGSEEP
Trigger: AGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTGGGGTTGTGGTGTCTTGAGTTTCTATAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp CTGTCTAAGGAAAATGAAGTTGGTAAGAAACTCACCTaGACAACGTTCCTGTTAAGGGAACCTTGCAACCCC +
Preference number: 3 (lower is better)
Translates to: LSKENEVGKKLT*TTFLLREPCNP
Trigger: GGGGTTGCAAGGTTCCCTTAACAGGAACGTTGTGCAGGTGAGTTTCTTACCAACTTCATTTTCCTTAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CAA 90 bp AGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTTCAGATCTAACTTCCTaGGAACTGAATTCTGTATTC +
Preference number: 3 (lower is better)
Translates to: SEEPLQHTLQTGRTATHCSDLTS*ELNSVF
Trigger: GAATACAGAATTCAGTTCCAAGGAAGTTAGATCTGA...ACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTGAAGAGGCTCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR-3UTR CAA 90 bp TCACCAAAAGGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGTTGGCAGCTGTTGGTaGTGCACTATAGACTGGCTC +
Preference number: 3 (lower is better)
Translates to: SPKGVKTFLRAGKSSSLVVGSCW*CTIDWL
Trigger: GAGCCAGTCTATAGTGCACAACCAACAGCTGCCAAC...AACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACCTTTTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
3UTR TCA 72 bp CAGAAGGTAATGGCATCCATGGTGTTTTCTACAGTGTaGAGGGCAGAAATTACACAACCAGTCATTACCCAA +
Preference number: 3 (lower is better)
Translates to: QKVMASMVFSTV*RAEITQPVITQ
Trigger: TTGGGTAATGACTGGTTGTGTAATTTCTGCCCTTCACACTGTAGAAAACACCATGGATGCCATTACCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR GCA 72 bp TATTGGGTCACTGCAAGTTATATCCCCTGCACACAATaGCAGGAATCCACATTTTACTCACAGGAATTTAGC +
Preference number: 3 (lower is better)
Translates to: YWVTASYIPCTQ*QESTFYSQEFS
Trigger: GCTAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAACTTGCAGTGACCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
3UTR TCA 72 bp GGTCCAGCTCTTAGGGATACTGACCAGAGAACTGCATaGGCAGTACTACCCTTCAAAACAATTTTATATAGT +
Preference number: 3 (lower is better)
Translates to: GPALRDTDQRTA*AVLPFKTILYS
Trigger: ACTATATAAAATTGTTTTGAAGGGTAGTACTGCTCATGCAGTTCTCTGGTCAGTATCCCTAAGAGCTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp CCCTGTGTTTTACTTGGAAAGCCACTTTTAATAGTGTaGTTGTCACAACAGGCAATGACACAGGCAAGATTG +
Preference number: 3 (lower is better)
Translates to: PCVLLGKPLLIV*LSQQAMTQARL
Trigger: CAATCTTGCCTGTGTCATTGCCTGTTGTGACAATCACACTATTAAAAGTGGCTTTCCAAGTAAAACACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR TCA 72 bp ATATCTATTCACATTAGCAACGCTAGCATCAACTCTTaGCAACATAGAAGTTTGAATATGTGGCTACATGTC +
Preference number: 3 (lower is better)
Translates to: ISIHISNASINS*QHRSLNMWLHV
Trigger: GACATGTAGCCACATATTCAAACTTCTATGTTGTCAAGAGTTGATGCTAGCGTTGCTAATGTGAATAGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCACCACCTGGGGCCGCTaGACGTCTGCCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSTTWGR*TSAFPS
Trigger: GCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGT...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGGCCGCTGGACGTCTaGCTTCCCCAGCAAACGCTC +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVGPLDV*LPQQTL
Trigger: GAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCC...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGCGCGGGGAGGGGCTaGTCATCCCTGGAGATTCCG +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCCAGRG*SSLEIP
Trigger: CGGAATCTCCAGGGATGACCAGCCCCTCCCCGCGCA...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp TACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCACCACCTGGGGCCGCTaGACGTCTGCCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YTSLPLHLHSSRRHPTVGTTWGR*TSAFPS
Trigger: GCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGT...GCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCGGGCCGCTGGACGTCTaGCTTCCCCAGCAAACGCTC +
Preference number: 4 (lower is better)
Translates to: YTSLPLHLHSSRRHPTVGGPLDV*LPQQTL
Trigger: GAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCC...GCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGCTGAATGCGCTGAGGTaGGGCTACCGCAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWLNALR*GYRRVG
Trigger: ACCGACTCTGCGGTAGCCTCACCTCAGCGCATTCAG...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGGTGGAGAGACTCATaGCCTGGGCACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSWWRDS*PGHTGP
Trigger: TGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCA...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCGGTACCTCAGCCACCTaGTGGGTCCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCGTSAT*WVPTLC
Trigger: GCACAGAGTGGGGACCCAGCAGGTGGCTGAGGTACC...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp TCTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAACCACCTGGGGCCGCTaGACGTCTGCCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SHCRSHTQPGQQVMSKGATTWGR*TSAFPS
Trigger: GCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGT...TGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTCAGCCGGCAGAACTaGCAGCGGTTACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCFSRQN*QRLRWC
Trigger: GCACCACCGTAACCGCTGCCAGTTCTGCCGGCTGAA...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCCTGAATGCGCTGAGGTaGGGCTACCGCAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCLNALR*GYRRVG
Trigger: ACCGACTCTGCGGTAGCCTCACCTCAGCGCATTCAG...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTGCAACCTTCACAACTaGCAGCCCCATAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVCNLHN*QPHSAG
Trigger: GCCGGCACTATGGGGCTGTCAGTTGTGAAGGTTGCA...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TCTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGGGCCGCTGGACGTCTaGCTTCCCCAGCAAACGCTC +
Preference number: 4 (lower is better)
Translates to: SHCRSHTQPGQQVMSKGAGPLDV*LPQQTL
Trigger: GAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCC...TGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGGGGCTGGTCATCCCTaGAGATTCCGGCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLGAGHP*RFRPRG
Trigger: ACCTCTTGGCCGGAATCTCCAGGGATGACCAGCCCC...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTCGGTGGAAATTATCTaGATGCGCGGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVSVEII*MRGEGL
Trigger: CAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGA...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTTTCAGCCGGCAGAACTaGCAGCGGTTACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCFSRQN*QRLRWC
Trigger: GCACCACCGTAACCGCTGCCAGTTCTGCCGGCTGAA...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTATGACCTGGGCACACTaGGCCAGGCCAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAMTWAH*ARPRVK
Trigger: CTTCACTCTTGGCCTGGCCCAGTGTGCCCAGGTCAT...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGAGAGACTCATGACCTaGGCACACTGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HCYTSLPLHLHSSRRHPTERLMT*AHWARP
Trigger: TGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTC...AGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGAGAGACTCATGACCTaGGCACACTGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLERLMT*AHWARP
Trigger: TGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTC...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp AGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCACTATAGACTGGCTCCAGGAGAGACTCATGACCTaGGCACACTGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRHPTVGSCWLCTIDWLQERLMT*AHWARP
Trigger: TGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTC...CTGGAGCCAGTCTATAGTGCACAACCAACAGCTGCCAACAGTGGGATGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTCCCCACTCTGTGCTaGACCAGCCCCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAVPTLC*TSPSIF
Trigger: AAATATGGAGGGGCTGGTTCAGCACAGAGTGGGGAC...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS-3UTR GCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTGGAAATTATCTGGATaGGCGGGGAGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWWKLSG*AGRGWS
Trigger: TGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCA...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTCGGTGGAAATTATCTaGATGCGCGGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTSVEII*MRGEGL
Trigger: CAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGA...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CAGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATGATCAGATACTGTGCAACCTTCACAACTaGCAGCCCCATAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: QRGYTTPTQLQVLNDQILCNLHN*QPHSAG
Trigger: GCCGGCACTATGGGGCTGTCAGTTGTGAAGGTTGCA...CAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTGCAACCTTCACAACTaGCAGCCCCATAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LTAEATLNLDNRSCQRVQCNLHN*QPHSAG
Trigger: GCCGGCACTATGGGGCTGTCAGTTGTGAAGGTTGCA...CTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTGTTCTGTAGGTGGTTaGCAATGGCTGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVCSVGG*QWLPGW
Trigger: CCATCCTGGCAGCCATTGTCAACCACCTACAGAACA...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTTGGAAATTATCTGGATaGGCGGGGAGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCWKLSG*AGRGWS
Trigger: TGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCA...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGGACTGGTCCTCTGGCTaGATTTCTGAAGCATCACCG +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWDWSSG*ISEASP
Trigger: CGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTC...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGGCTTGTTTCAGCCTTaGAATCCGCGGCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TLPFPCTCTVLGGIPLLAGLFQP*NPRPGE
Trigger: TTCTCCTGGCCGCGGATTCCAAGGCTGAAACAAGCC...TGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGGCTTGTTTCAGCCTTaGAATCCGCGGCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLGLFQP*NPRPGE
Trigger: TTCTCCTGGCCGCGGATTCCAAGGCTGAAACAAGCC...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTCCTGTCCAAGTGCCTaGAAGGCTGGGATTGACCTT +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSSCPSA*KAGIDL
Trigger: AAGGTCAATCCCAGCCTTCCAGGCACTTGGACAGGA...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGTGACATGTGTGTCTaGAAGGAGAGGGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCCDMCV*KERAFN
Trigger: GTTGAAGGCCCTCTCCTTTCAGACACACATGTCACA...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTTGTTCTGTAGGTGGTTaGCAATGGCTGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: HCYTSLPLHLHSSRRHPTCSVGG*QWLPGW
Trigger: CCATCCTGGCAGCCATTGTCAACCACCTACAGAACA...AGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp TACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCTGTTCTGTAGGTGGTTaGCAATGGCTGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: YTSLPLHLHSSRRHPTVGCSVGG*QWLPGW
Trigger: CCATCCTGGCAGCCATTGTCAACCACCTACAGAACA...GCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTCCAGAGGCATCCACTaGGGTGACTATCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWSRGIH*GDYLDL
Trigger: AAGATCCAGATAGTCACCGCAGTGGATGCCTCTGGA...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CAAGGCCTGGATCTAGAATTTCAGCAGCACCAACAGCCCCGCTGCACCCAGCCAGTGGTGAATATGAGCTaGTTGGCACTGGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: QGLDLEFQQHQQPRCTQPVVNMS*LALDVS
Trigger: GGAAACATCCAGTGCCAAGCAGCTCATATTCACCAC...TGGCTGGGTGCAGCGGGGCTGTTGGTGCTGCTGAAATTCTAGATCCAGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGCTTGGTTTCTCCCGTTaGACATCAAAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLLGFSR*TSKGFR
Trigger: ACGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAG...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTGCTCCATCTTTGTCTaGCACAAATGTGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVCSIFV*HKCGSG
Trigger: GCCACTCCCACATTTGTGGCAGACAAAGATGGAGCA...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTGCTCCATCTTTGTCTaGCACAAATGTGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWCSIFV*HKCGSG
Trigger: GCCACTCCCACATTTGTGGCAGACAAAGATGGAGCA...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTGACTGGTCCTCTGGCTaGATTTCTGAAGCATCACCG +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGDWSSG*ISEASP
Trigger: CGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTC...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGATTGACCTTGCCCAGTaGATGGAGAGGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLIDLAQ*MERKSR
Trigger: CCTGCTTTTCCTCTCCATGCACTGGGCAAGGTCAAT...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTGTGGTTGACAATGGCTaGCAGGATGGTGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGVVDNG*QDGGET
Trigger: AGTCTCTCCACCATCCTGGCAGCCATTGTCAACCAC...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGTCTGCCACAAATGTaGGAGTGGCTATCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCCLPQM*EWLSED
Trigger: GTCCTCTGATAGCCACTCCCACATTTGTGGCAGACA...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTTCCTGTCCAAGTGCCTaGAAGGCTGGGATTGACCTT +
Preference number: 4 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCSCPSA*KAGIDL
Trigger: AAGGTCAATCCCAGCCTTCCAGGCACTTGGACAGGA...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAATGACCTGGGCACACTaGGCCAGGCCAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: TAEATLNLDNRSCQRVQSMTWAH*ARPRVK
Trigger: CTTCACTCTTGGCCTGGCCCAGTGTGCCCAGGTCAT...TGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTATGCTGTTCTGTAGGTaGTTGACAATGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVMLFCR*LTMAAR
Trigger: CCTGGCAGCCATTGTCAACCACCTACAGAACAGCAT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCATGCTGTTCTGTAGGTaGTTGACAATGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSMLFCR*LTMAAR
Trigger: CCTGGCAGCCATTGTCAACCACCTACAGAACAGCAT...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
3UTR CAA 72 bp CATGTTCTGGAAGAGTCTGCAGAAAGGCATCAGGGATaGGGACCAACCATGAGGGTAAGGACCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: HVLEESAERHQG*GPTMRVRTLTG
Trigger: GCCTGTCAGGGTCCTTACCCTCATGGTTGGTCCCAATCCCTGATGCCTTTCTGCAGACTCTTCCAGAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CAAGGCCTGGATCTAGAATTTCAGCAGCACCAACAGCCCCGCTGCACCCAGCCATCCTCACGCTCCTTTTaGAGAAACCTTTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: QGLDLEFQQHQQPRCTQPSSRSF*RNLCNL
Trigger: AAGGTTGCAAAGGTTTCTTCAAAAGGAGCGTGAGGA...TGGCTGGGTGCAGCGGGGCTGTTGGTGCTGCTGAAATTCTAGATCCAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTATGATGGGTGTTGACTaGTCTCTGCTGATGACATGG +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVMMGVD*SLLMTW
Trigger: CCATGTCATCAGCAGAGATCAGTCAACACCCATCAT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCTGTGACATGTGTGTCTaGAAGGAGAGGGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCCDMCV*KERAFN
Trigger: GTTGAAGGCCCTCTCCTTTCAGACACACATGTCACA...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp TTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGTGGTGGAGAGACTCATaGCCTGGGCACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FSVIGDRQRKEVGICLTRWWRDS*PGHTGP
Trigger: TGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCA...CCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCCTATCTCCAATTACGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp AGACTGGCTCCAGTGATCTGGCCATTATATTCTGCTGTCTCCATCTTGAGGATGTGGTGGAGAGACTCATaGCCTGGGCACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLAPVIWPLYSAVSILRMWWRDS*PGHTGP
Trigger: TGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCA...CATCCTCAAGATGGAGACAGCAGAATATAATGGCCAGATCACTGGAGCCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp AAGAAGTGGCTGACACACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTGGAAATTATCTGGATaGGCGGGGAGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KKWLTHWRHLCTPRHCYTWKLSG*AGRGWS
Trigger: TGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCA...AGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAGCCACTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTTCCAGAGGCATCCACTaGGGTGACTATCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: HCYTSLPLHLHSSRRHPTSRGIH*GDYLDL
Trigger: AAGATCCAGATAGTCACCGCAGTGGATGCCTCTGGA...AGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTCAGCGGTTACGGTGGTaGTTGTTGATGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGQRLRW*LLMMQS
Trigger: AGACTGCATCATCAACAAGCACCACCGTAACCGCTG...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp AGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCACTATAGACTGGCTCCAGCAGCGGTTACGGTGGTaGTTGTTGATGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RRHPTVGSCWLCTIDWLQQRLRW*LLMMQS
Trigger: AGACTGCATCATCAACAAGCACCACCGTAACCGCTG...CTGGAGCCAGTCTATAGTGCACAACCAACAGCTGCCAACAGTGGGATGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTCAGACTCCATTTTCATaGCCATCTCCAGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVQTPFS*PSPGTS
Trigger: AGAAGTGCCTGGAGATGGGCATGAAAATGGAGTCTG...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTCTTGGTTTCTCCCGTTaGACATCAAAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGLGFSR*TSKGFR
Trigger: ACGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAG...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCCTTGGTTTCTCCCGTTaGACATCAAAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTLGFSR*TSKGFR
Trigger: ACGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAG...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp GGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTGCAGAAGCCACACTCTGGAAGCAGCACAATTaGTTGGTTTCTCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: GPSPHAPGIGTLTAEATLWKQHN*LVSPVA
Trigger: TGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCA...GAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGAAAAGCAGGCGGGATaGAGACTCACAGATGTAATG +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAEKQAG*RLTDVM
Trigger: CATTACATCTGTGAGTCTGCATCCCGCCTGCTTTTC...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTACTGCGGTGACTATCTaGATCTTTTGTCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVTAVTI*IFCPVC
Trigger: GCAGACAGGACAAAAGATCCAGATAGTCACCGCAGT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGACTGCGGTGACTATCTaGATCTTTTGTCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLTAVTI*IFCPVC
Trigger: GCAGACAGGACAAAAGATCCAGATAGTCACCGCAGT...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTCTGCCACAAATGTaGGAGTGGCTATCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGCLPQM*EWLSED
Trigger: GTCCTCTGATAGCCACTCCCACATTTGTGGCAGACA...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGATCTCACTTGCAGACTaGTCCTCTGGCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLISLAD*SSGCIS
Trigger: AGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGAT...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGATCTCACTTGCAGACTaGTCCTCTGGCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWISLAD*SSGCIS
Trigger: AGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGAT...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTTCTCTGCTGATGACATaGATACTCCCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAASLLMT*ILPPPL
Trigger: TAGTGGAGGAGGGAGTATCCATGTCATCAGCAGAGA...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTCTCTGCTGATGACATaGATACTCCCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSSLLMT*ILPPPL
Trigger: TAGTGGAGGAGGGAGTATCCATGTCATCAGCAGAGA...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTCTGGCTCCAGTGATCTaGCCATTATATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCLAPVI*PLYSAV
Trigger: GACAGCAGAATATAATGGCCAGATCACTGGAGCCAG...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
3UTR CAA 72 bp ATGTCTGAGCCACACGAAGCTCCAGCTTTGGAGCCTTaGAAGAAGACCAAGGGTCTCAGTCACCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MSEPHEAPALEP*KKTKGLSHQAP
Trigger: AGGAGCTTGGTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp CAAATGCCCATGTCTGAGCCACACGAAGCTCCAGCTTaGGAGCCTTTGAAGAAGACCAAGGGTCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QMPMSEPHEAPA*EPLKKTKGLSH
Trigger: GTGACTGAGACCCTTGGTCTTCTTCAAAGGCTCCAAAGCTGGAGCTTCGTGTGGCTCAGACATGGGCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp CACCACAACCCCAACTGCAGCCTCAGAAAGAGAAGAGGCAGTGAAGAGCCTCTTAGGCATCCACTGCGGTaGCTATCTGGATCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HHNPNCSLRKRRGSEEPLRHPLR*LSGSFV
Trigger: GACAAAAGATCCAGATAGTCACCGCAGTGGATGCCT...AAGAGGCTCTTCACTGCCTCTTCTCTTTCTGAGGCTGCAGTTGGGGTTGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTCCTCACGCTCCTTTTaGAGAAACCTTTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWSSRSF*RNLCNL
Trigger: AAGGTTGCAAAGGTTTCTTCAAAAGGAGCGTGAGGA...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTCCTCACGCTCCTTTTaGAGAAACCTTTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSSSRSF*RNLCNL
Trigger: AAGGTTGCAAAGGTTTCTTCAAAAGGAGCGTGAGGA...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTCAATGATGGGTGTTaGCTGATCTCTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWFNDGC*LISADD
Trigger: GTCATCAGCAGAGATCAGTCAACACCCATCATTGAA...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CAGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATGATCAGATACTGTGTGACATGTGTGTCTaGAAGGAGAGGGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: QRGYTTPTQLQVLNDQILCDMCV*KERAFN
Trigger: GTTGAAGGCCCTCTCCTTTCAGACACACATGTCACA...CAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGCTGCTGTCTCCATCTTaGGGATGTAAGGAATTATGC +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWLLSPS*GCKELC
Trigger: GCATAATTCCTTACATCCTCAAGATGGAGACAGCAG...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR TCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTATAGACTGGCTCCAGTaGTCTGGCCATTATATTCTG +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVIDWLQ*SGHYIL
Trigger: CAGAATATAATGGCCAGATCACTGGAGCCAGTCTAT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR GCA 90 bp ACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGTGGTGAATATGAGCTaGTTGGCACTGGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLPFPCTCTVLGGIPLLAVVNMS*LALDVS
Trigger: GGAAACATCCAGTGCCAAGCAGCTCATATTCACCAC...TGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTCAGACTCCATTTTCATaGCCATCTCCAGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCQTPFS*PSPGTS
Trigger: AGAAGTGCCTGGAGATGGGCATGAAAATGGAGTCTG...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTCAGACTCCATTTTCATaGCCATCTCCAGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HCYTSLPLHLHSSRRHPTQTPFS*PSPGTS
Trigger: AGAAGTGCCTGGAGATGGGCATGAAAATGGAGTCTG...AGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGGAAGCAGCACAATTaGTTGGTTTCTCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTWKQHN*LVSPVA
Trigger: TGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCA...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGTGGAAGCAGCACAATTaGTTGGTTTCTCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLWKQHN*LVSPVA
Trigger: TGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCA...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGTGCTCCATCTTTGTCTaGCACAAATGTGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: CTPRHCYTSLPLHLHSSRCSIFV*HKCGSG
Trigger: GCCACTCCCACATTTGTGGCAGACAAAGATGGAGCA...CCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCAAGACCTGTTTGTCTTaGTCCATCTTTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSKTCLS*SIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTT...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCGAAAAGCAGGCGGGATaGAGACTCACAGATGTAATG +
Preference number: 4 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCEKQAG*RLTDVM
Trigger: CATTACATCTGTGAGTCTGCATCCCGCCTGCTTTTC...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp GCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCATTGACCTTGCCCAGTaGATGGAGAGGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AEATLNLDNRSCQRVQSTIDLAQ*MERKSR
Trigger: CCTGCTTTTCCTCTCCATGCACTGGGCAAGGTCAAT...GGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp AAGAAGTGGCTGACACACTGGAGACACCTGTGCACACCAAGACACTGCTACACTGTGGTTGACAATGGCTaGCAGGATGGTGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: KKWLTHWRHLCTPRHCYTVVDNG*QDGGET
Trigger: AGTCTCTCCACCATCCTGGCAGCCATTGTCAACCAC...AGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAGCCACTTCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAAGTGGTTGACAATGGCTaGCAGGATGGTGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: LQKPHSTWTTGHVKGCSQVVDNG*QDGGET
Trigger: AGTCTCTCCACCATCCTGGCAGCCATTGTCAACCAC...TTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTATGTGCTCCATCACTTaGTTTATCCGGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAMCSIT*FIRSPE
Trigger: TTCTGGTGACCGGATAAAGCAAGTGATGGAGCACAT...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTGCAGCTTCCAGATGTaGTCCATCACTTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVCSFQM*SITCFI
Trigger: GATAAAGCAAGTGATGGAGCACATCTGGAAGCTGCA...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGCAGCTTCCAGATGTaGTCCATCACTTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSCSFQM*SITCFI
Trigger: GATAAAGCAAGTGATGGAGCACATCTGGAAGCTGCA...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTTATCCAGTTTCGCCATaGTGTTACAGAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVYPVSP*CYRTPA
Trigger: TGCAGGAGTTCTGTAACAGCATGGCGAAACTGGATA...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTCTCAATCTGGCTTGTaGCTGTCAAACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWSQSGL*LSNLDD
Trigger: ATCATCCAGGTTTGACAGGCACAAGCCAGATTGAGA...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp TCTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCACTACCGCAGAGTCGGTaGAAATTATCTGGATGCGCG +
Preference number: 4 (lower is better)
Translates to: SHCRSHTQPGQQVMSKGALPQSR*KLSGCA
Trigger: CGCGCATCCAGATAATTTCCACCGACTCTGCGGTAG...TGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCAGCAGCACAATTGCTTaGTTTCTCCCGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCSSTIA*FLPLHI
Trigger: GATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCT...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTAGCAGCACAATTGCTTaGTTTCTCCCGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: HCYTSLPLHLHSSRRHPTSSTIA*FLPLHI
Trigger: GATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCT...AGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTCCACAAATGTGGGAGTaGCTATCAGAGGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCPQMWE*LSEDFS
Trigger: TGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGG...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAVHKHP*IKKTCL
Trigger: CAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAAC...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTCGTATCAAAGGCTGTTaGATGTTCACAAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVRIKGC*MFTSIP
Trigger: AGGGATGCTTGTGAACATCCAACAGCCTTTGATACG...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTGCAGAAGCCACACTCCGTATCAAAGGCTGTTaGATGTTCACAAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: GPSPHAPGIGTLTAEATLRIKGC*MFTSIP
Trigger: AGGGATGCTTGTGAACATCCAACAGCCTTTGATACG...GAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCATCTCACTTGCAGACTaGTCCTCTGGCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTISLAD*SSGCIS
Trigger: AGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGAT...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTTACATTGAGGTACTCTaGCATAGGACTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAYIEVL*HRTGHC
Trigger: ACAATGCCCAGTCCTATGCCAGAGTACCTCAATGTA...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTACATTGAGGTACTCTaGCATAGGACTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLYIEVL*HRTGHC
Trigger: ACAATGCCCAGTCCTATGCCAGAGTACCTCAATGTA...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTGAAAGCTTATCTTCCTaGATGCTGTTCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCESLSS*MLFCRW
Trigger: CCACCTACAGAACAGCATCCAGGAAGATAAGCTTTC...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp GCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCATGATGGGTGTTGACTaGTCTCTGCTGATGACATGG +
Preference number: 4 (lower is better)
Translates to: AEATLNLDNRSCQRVQSTMMGVD*SLLMTW
Trigger: CCATGTCATCAGCAGAGATCAGTCAACACCCATCAT...GGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp AGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCACTATAGACTGGCTCCAGTTCAATGATGGGTGTTaGCTGATCTCTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: RRHPTVGSCWLCTIDWLQFNDGC*LISADD
Trigger: GTCATCAGCAGAGATCAGTCAACACCCATCATTGAA...CTGGAGCCAGTCTATAGTGCACAACCAACAGCTGCCAACAGTGGGATGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGATAGACTGGCTCCAGTaGTCTGGCCATTATATTCTG +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLIDWLQ*SGHYIL
Trigger: CAGAATATAATGGCCAGATCACTGGAGCCAGTCTAT...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR GCA 90 bp TGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGGTGGTGAATATGAGCTaGTTGGCACTGGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: CTPRHCYTSLPLHLHSSRVVNMS*LALDVS
Trigger: GGAAACATCCAGTGCCAAGCAGCTCATATTCACCAC...CCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCAAGACCTGTTTGTCTTaGTCCATCTTTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTKTCLS*SIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTT...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGAAGACCTGTTTGTCTTaGTCCATCTTTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLKTCLS*SIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTT...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTATGTGCTCCATCACTTaGTTTATCCGGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGMCSIT*FIRSPE
Trigger: TTCTGGTGACCGGATAAAGCAAGTGATGGAGCACAT...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTTGCAGCTTCCAGATGTaGTCCATCACTTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCCSFQM*SITCFI
Trigger: GATAAAGCAAGTGATGGAGCACATCTGGAAGCTGCA...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTATCCAGTTTCGCCATaGTGTTACAGAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGYPVSP*CYRTPA
Trigger: TGCAGGAGTTCTGTAACAGCATGGCGAAACTGGATA...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTCTGGCCATTATATTCTaGTGTCTCCATCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVLAIIF*CLHLED
Trigger: ATCCTCAAGATGGAGACAGCAGAATATAATGGCCAG...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp TGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGACTGCGGTGACTATCTaGATCTTTTGTCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CTPRHCYTSLPLHLHSSRTAVTI*IFCPVC
Trigger: GCAGACAGGACAAAAGATCCAGATAGTCACCGCAGT...CCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGAAAAACCACAAATGTGGGAGTaGCTATCAGAGGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: GKGKRWASVLPGPSPWEKPQMWE*LSEDFS
Trigger: TGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGG...TTTTTCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp CAGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATGATCAGATACTGCCACAAATGTGGGAGTaGCTATCAGAGGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: QRGYTTPTQLQVLNDQILPQMWE*LSEDFS
Trigger: TGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGG...CAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: YTSLPLHLHSSRRHPTVGVHKHP*IKKTCL
Trigger: CAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAAC...GCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGCGTATCAAAGGCTGTTaGATGTTCACAAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLRIKGC*MFTSIP
Trigger: AGGGATGCTTGTGAACATCCAACAGCCTTTGATACG...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp AGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTGGCTTGTTTCAGCCTTaGAATCCGCGGCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEEPLQHTLQTGRTATHCGLFQP*NPRPGE
Trigger: TTCTCCTGGCCGCGGATTCCAAGGCTGAAACAAGCC...ACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTGAAGAGGCTCTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGAAGATTCACTCAGGTTaGCCAAAGAGGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWKIHSG*PKRSLH
Trigger: ATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTT...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCGAAAGCTTATCTTCCTaGATGCTGTTCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: YTSLPLHLHSSRRHPTVGESLSS*MLFCRW
Trigger: CCACCTACAGAACAGCATCCAGGAAGATAAGCTTTC...GCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGTGTGCCTGTCAAACCTaGATGATTCATAGCCGTCTA +
Preference number: 4 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLCACQT*MIHSRL
Trigger: TAGACGGCTATGAATCATCCAGGTTTGACAGGCACA...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
3UTR CAA 72 bp CAAAGAGCAACCTGTGGGTCAGGCAAATTTTTGCACTaGGCTTCATCCAAGCCAGATGCCTGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QRATCGSGKFLH*ASSKPDACSLW
Trigger: CCACAGTGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTTGCCTGACCCACAGGTTGCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp GTTAAGGGAACCTTGCAACCCCAATATCTATTCACATTAGCAACGCTAGCATCACTGAATGCGCTGAGGTaGGGCTACCGCAGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: VKGTLQPQYLFTLATLASLNALR*GYRRVG
Trigger: ACCGACTCTGCGGTAGCCTCACCTCAGCGCATTCAG...TGATGCTAGCGTTGCTAATGTGAATAGATATTGGGGTTGCAAGGTTCCCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp AAGAAGTGGCTGACACACTGGAGACACCTGTGCACACCAAGACACTGCTACACTATGATGGGTGTTGACTaGTCTCTGCTGATGACATGG +
Preference number: 4 (lower is better)
Translates to: KKWLTHWRHLCTPRHCYTMMGVD*SLLMTW
Trigger: CCATGTCATCAGCAGAGATCAGTCAACACCCATCAT...AGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAGCCACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp ACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAATCTGTGCCTTCTCCTaGAATTTCTCAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLPFPCTCTVLGGIPLLAICAFS*NFSIWL
Trigger: AAGCCAGATTGAGAAATTTCAGGAGAAGGCACAGAT...TGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR GCA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCCTGGCCATTATATTCTaGTGTCTCCATCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCLAIIF*CLHLED
Trigger: ATCCTCAAGATGGAGACAGCAGAATATAATGGCCAG...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp GTTAAGGGAACCTTGCAACCCCAATATCTATTCACATTAGCAACGCTAGCATCATTCAGCCGGCAGAACTaGCAGCGGTTACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VKGTLQPQYLFTLATLASFSRQN*QRLRWC
Trigger: GCACCACCGTAACCGCTGCCAGTTCTGCCGGCTGAA...TGATGCTAGCGTTGCTAATGTGAATAGATATTGGGGTTGCAAGGTTCCCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTAAGATTCACTCAGGTTaGCCAAAGAGGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGKIHSG*PKRSLH
Trigger: ATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTT...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGTACATTGAGGTACTCTaGCATAGGACTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: CTPRHCYTSLPLHLHSSRYIEVL*HRTGHC
Trigger: ACAATGCCCAGTCCTATGCCAGAGTACCTCAATGTA...CCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp AAGAAGTGGCTGACACACTGGAGACACCTGTGCACACCAAGACACTGCTACACTCTGCTGTCTCCATCTTaGGGATGTAAGGAATTATGC +
Preference number: 4 (lower is better)
Translates to: KKWLTHWRHLCTPRHCYTLLSPS*GCKELC
Trigger: GCATAATTCCTTACATCCTCAAGATGGAGACAGCAG...AGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGTGTGTCAGCCACTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTTATAGCTTTAAGGTATaGGTACTCATAGCCGTCTAT +
Preference number: 4 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAYSFKV*VLIAVY
Trigger: ATAGACGGCTATGAGTACGCATACCTTAAAGCTATA...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp CTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAAGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LQKPHSTWTTGHVKGCSQVHKHP*IKKTCL
Trigger: CAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAAC...TTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GTTAAGGGAACCTTGCAACCCCAATATCTATTCACATTAGCAACGCTAGCATCAATGACCTGGGCACACTaGGCCAGGCCAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VKGTLQPQYLFTLATLASMTWAH*ARPRVK
Trigger: CTTCACTCTTGGCCTGGCCCAGTGTGCCCAGGTCAT...TGATGCTAGCGTTGCTAATGTGAATAGATATTGGGGTTGCAAGGTTCCCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp CCAGTGAAGGAGTTTGGCCCAAAGTGGCCCTGTCAATaGGCCATTACTAATGACGGAACTTACAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: PVKEFGPKWPCQ*AITNDGTYKGP
Trigger: TGGTCCTTTGTAAGTTCCGTCATTAGTAATGGCCAATTGACAGGGCCACTTTGGGCCAAACTCCTTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR TCA 90 bp TCTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAATCTGTGCCTTCTCCTaGAATTTCTCAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SHCRSHTQPGQQVMSKGAICAFS*NFSIWL
Trigger: AAGCCAGATTGAGAAATTTCAGGAGAAGGCACAGAT...TGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTGGATGTAAGGAATTATaGTGTCTATTGAAACATTGC +
Preference number: 4 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCGCKEL*CLLKHC
Trigger: GCAATGTTTCAATAGACAGCATAATTCCTTACATCC...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR CCA 90 bp TTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGTCTCTGCTGATGACATaGATACTCCCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: FSVIGDRQRKEVGICLTRSLLMT*ILPPPL
Trigger: TAGTGGAGGAGGGAGTATCCATGTCATCAGCAGAGA...CCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCCTATCTCCAATTACGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp TTTTATATAGTGTGGATGCTGCTGCTCCATTTGAAAGCCATACTGACCACCCTGCTGTTACAATCTGAATaGGCTGAGGTGAGGCTACCG +
Preference number: 4 (lower is better)
Translates to: FYIVWMLLLHLKAILTTLLLQSE*AEVRLP
Trigger: CGGTAGCCTCACCTCAGCGCATTCAGATTGTAACAG...CAGGGTGGTCAGTATGGCTTTCAAATGGAGCAGCAGCATCCACACTATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp GTTAAGGGAACCTTGCAACCCCAATATCTATTCACATTAGCAACGCTAGCATCAGACTGGTCCTCTGGCTaGATTTCTGAAGCATCACCG +
Preference number: 4 (lower is better)
Translates to: VKGTLQPQYLFTLATLASDWSSG*ISEASP
Trigger: CGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTC...TGATGCTAGCGTTGCTAATGTGAATAGATATTGGGGTTGCAAGGTTCCCTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp TCATTAACTCCTCAAAAGGAAACAGCCTATCTAGCCTaGAGCCCCATGGCTGTACCTGCCCATAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: SLTPQKETAYLA*SPMAVPAHKQV
Trigger: TACCTGTTTATGGGCAGGTACAGCCATGGGGCTCAAGGCTAGATAGGCTGTTTCCTTTTGAGGAGTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp AAAACACAAAGAGCAACCTGTGGGTCAGGCAAATTTTaGCACTTGGCTTCATCCAAGCCAGATGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KTQRATCGSGKF*HLASSKPDACS
Trigger: TGAGCAGGCATCTGGCTTGGATGAAGCCAAGTGCAAAAATTTGCCTGACCCACAGGTTGCTCTTTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp GCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAACCGGATGTAAGGAATTATaGTGTCTATTGAAACATTGC +
Preference number: 4 (lower is better)
Translates to: AEATLNLDNRSCQRVQSTGCKEL*CLLKHC
Trigger: GCAATGTTTCAATAGACAGCATAATTCCTTACATCC...GGTTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp ACTGGCTCCAGTGATCTGGCCATTATATTCTGCTGTCTCCATCTTGAGGATGTAGAAAGCTTATCTTCCTaGATGCTGTTCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TGSSDLAIIFCCLHLEDVESLSS*MLFCRW
Trigger: CCACCTACAGAACAGCATCCAGGAAGATAAGCTTTC...TACATCCTCAAGATGGAGACAGCAGAATATAATGGCCAGATCACTGGAGCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp CGTAACCATGCACAGCAACTCTCTATACAGACAACAATGCAGATTCTCCTTCAGATGTGCTCCATCACTTaGTTTATCCGGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: RNHAQQLSIQTTMQILLQMCSIT*FIRSPE
Trigger: TTCTGGTGACCGGATAAAGCAAGTGATGGAGCACAT...CTGAAGGAGAATCTGCATTGTTGTCTGTATAGAGAGTTGCTGTGCATGGTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp GAAACTCACCTGCACAACGTTCCTGTTAAGGGAACCTaGCAACCCCAATATCTATTCACATTAGCAACGCTA +
Preference number: 4 (lower is better)
Translates to: ETHLHNVPVKGT*QPQYLFTLATL
Trigger: TAGCGTTGCTAATGTGAATAGATATTGGGGTTGCAAGGTTCCCTTAACAGGAACGTTGTGCAGGTGAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp CCATCCACATCTAATACTGACACTGACAAACTAGAAAACCATTCCAAGGGCATAGAAAAGCAGGCGGGATaGAGACTCACAGATGTAATG +
Preference number: 4 (lower is better)
Translates to: PSTSNTDTDKLENHSKGIEKQAG*RLTDVM
Trigger: CATTACATCTGTGAGTCTGCATCCCGCCTGCTTTTC...TATGCCCTTGGAATGGTTTTCTAGTTTGTCAGTGTCAGTATTAGATGTGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp AGTGAAGAGCCTCTTCAACACACACTGCAAACTGGAAGGACAGCGACACATTGTTATAGCTTTAAGGTATaGGTACTCATAGCCGTCTAT +
Preference number: 4 (lower is better)
Translates to: SEEPLQHTLQTGRTATHCYSFKV*VLIAVY
Trigger: ATAGACGGCTATGAGTACGCATACCTTAAAGCTATA...ACAATGTGTCGCTGTCCTTCCAGTTTGCAGTGTGTGTTGAAGAGGCTCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp GTTATATCCCCTGCACACAATGCCAGGAATCCACATTTTACTCACAGGAATTTAAGCAGCACAATTGCTTaGTTTCTCCCGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: VISPAHNARNPHFTHRNLSSTIA*FLPLHI
Trigger: GATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCT...TAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp TCACCAAAAGGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTTCCTGTCCAAGTGCCTaGAAGGCTGGGATTGACCTT +
Preference number: 4 (lower is better)
Translates to: SPKGVKTFLRAGKSSSLVSCPSA*KAGIDL
Trigger: AAGGTCAATCCCAGCCTTCCAGGCACTTGGACAGGA...AACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACCTTTTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR TCA 90 bp GTCACCAAGCTCCTTCCAGTTATGCTAAACTGGTTTGTGAAAAGGAAGTTTATCTTCAATGATGGGTGTTaGCTGATCTCTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: VTKLLPVMLNWFVKRKFIFNDGC*LISADD
Trigger: GTCATCAGCAGAGATCAGTCAACACCCATCATTGAA...GATAAACTTCCTTTTCACAAACCAGTTTAGCATAACTGGAAGGAGCTTGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR GCA 90 bp TCACCAAAAGGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTATTGACCTTGCCCAGTaGATGGAGAGGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPKGVKTFLRAGKSSSLVIDLAQ*MERKSR
Trigger: CCTGCTTTTCCTCTCCATGCACTGGGCAAGGTCAAT...AACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACCTTTTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR GCA 90 bp TTTTCCCAGTCTCCTGTCCATAGGAATGCAAAGAGCTTTAAGTCAGATCTAACTTCTCAATCTGGCTTGTaGCTGTCAAACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FSQSPVHRNAKSFKSDLTSQSGL*LSNLDD
Trigger: ATCATCCAGGTTTGACAGGCACAAGCCAGATTGAGA...AGTTAGATCTGACTTAAAGCTCTTTGCATTCCTATGGACAGGAGACTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp ATCTGTAAGTATCTTCAGAGTAGGTTTTCTGCACATAGTCCTGTAATTCCATCTATGCTGTTCTGTAGGTaGTTGACAATGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ICKYLQSRFSAHSPVIPSMLFCR*LTMAAR
Trigger: CCTGGCAGCCATTGTCAACCACCTACAGAACAGCAT...AGATGGAATTACAGGACTATGTGCAGAAAACCTACTCTGAAGATACTTACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR CCA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCCTGGCTCCAGTGATCTaGCCATTATATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVLAPVI*PLYSAV
Trigger: GACAGCAGAATATAATGGCCAGATCACTGGAGCCAG...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp AAACAATTTTATATAGTGTGGATGCTGCTGCTCCATTaGAAAGCCATACTGACCACCCTGATTGATGCCATG +
Preference number: 4 (lower is better)
Translates to: KQFYIVWMLLLH*KAILTTLIDAM
Trigger: CATGGCATCAATCAGGGTGGTCAGTATGGCTTTCAAATGGAGCAGCAGCATCCACACTATATAAAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CCA 90 bp GTCACCAAGCTCCTTCCAGTTATGCTAAACTGGTTTGTGAAAAGGAAGTTTATCAAGATTCACTCAGGTTaGCCAAAGAGGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: VTKLLPVMLNWFVKRKFIKIHSG*PKRSLH
Trigger: ATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTT...GATAAACTTCCTTTTCACAAACCAGTTTAGCATAACTGGAAGGAGCTTGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp ATGATTTCAGTTAATGAGAACATTGTATGGATACAATaGTTAAAGGTAAGGCCACAACGATCTGGACAACCA +
Preference number: 4 (lower is better)
Translates to: MISVNENIVWIQ*LKVRPQRSGQP
Trigger: TGGTTGTCCAGATCGTTGTGGCCTTACCTTTAACAATTGTATCCATACAATGTTCTCATTAACTGAAATCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
3UTR CAA 72 bp CCTTGTACAAAACACCTAGGTCAACCTCATCTCATTTaGGAGTTGTCTTTAGAAATTGACATAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: PCTKHLGQPHLI*ELSLEIDIRVK
Trigger: CTTAACTCTTATGTCAATTTCTAAAGACAACTCCAAAATGAGATGAGGTTGACCTAGGTGTTTTGTACAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS CCA 90 bp CGGCCAGAGGCTTTGTCGCCACAGACCACACAGTACTCCACCACCTaGGGCCGCTGGACGTCTGCCTTCCCCAGCAAACGCTCCACAGAA +
Preference number: 5 (lower is better)
Translates to: RPEALSPQTTQYSTT*GRWTSAFPSKRSTE
Trigger: TTCTGTGGAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGTGGAGTACTGTGTGGTCTGTGGCGACAAAGCCTCTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 90 bp TGCGCTGAGGTGAGGCTACCGCAGAGTCGGTGGAAATTATCTGGATaGGCGGGGAGGGGCTGGTCATCCCTGGAGATTCCGGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: CAEVRLPQSRWKLSG*AGRGWSSLEIPAKR
Trigger: CCTCTTGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGACTCTGCGGTAGCCTCACCTCAGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS GCA 90 bp GCCACAGACCACACAGTACTCCACCACCTGGGGCCGCTGGACGTCTaGCTTCCCCAGCAAACGCTCCACAGAAGCAGAATCCGTGACGAT +
Preference number: 5 (lower is better)
Translates to: ATDHTVLHHLGPLDV*LPQQTLHRSRIRDD
Trigger: ATCGTCACGGATTCTGCTTCTGTGGAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGTGGAGTACTGTGTGGTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp GCTTTGTCGCCACAGACCACACAGTACTCCACCACCTGGGGCCGCTaGACGTCTGCCTTCCCCAGCAAACGCTCCACAGAAGCAGAATCC +
Preference number: 5 (lower is better)
Translates to: ALSPQTTQYSTTWGR*TSAFPSKRSTEAES
Trigger: GGATTCTGCTTCTGTGGAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGTGGAGTACTGTGTGGTCTGTGGCGACAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp ACAATGGCTGCCAGGATGGTGGAGAGACTCATGACCTGGGCACACTaGGCCAGGCCAAGAGTGAAGAGCTCATTCCAGCAGGCCCTCACC +
Preference number: 5 (lower is better)
Translates to: TMAARMVERLMTWAH*ARPRVKSSFQQALT
Trigger: GGTGAGGGCCTGCTGGAATGAGCTCTTCACTCTTGGCCTGGCCCAGTGTGCCCAGGTCATGAGTCTCTCCACCATCCTGGCAGCCATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp CTACCGCAGAGTCGGTGGAAATTATCTGGATGCGCGGGGAGGGGCTaGTCATCCCTGGAGATTCCGGCCAAGAGGTCTGTGTACGTGGTA +
Preference number: 5 (lower is better)
Translates to: LPQSRWKLSGCAGRG*SSLEIPAKRSVYVV
Trigger: TACCACGTACACAGACCTCTTGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGACTCTGCGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS-3UTR CAA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGCCGGCCAGAGGCTTaGTCGCCACAGACCACACAG +
Preference number: 5 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGCRPEA*SPQTTQ
Trigger: CTGTGTGGTCTGTGGCGACAAAGCCTCTGGCCGGCA...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTCCTGGAAGGCTGGGATaGACCTTGCCCAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCPGRLG*TLPSAW
Trigger: CCATGCACTGGGCAAGGTCAATCCCAGCCTTCCAGG...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGCCTGGAAGGCTGGGATaGACCTTGCCCAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLPGRLG*TLPSAW
Trigger: CCATGCACTGGGCAAGGTCAATCCCAGCCTTCCAGG...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp CTGTTACAATCTGAATGCGCTGAGGTGAGGCTACCGCAGAGTCGGTaGAAATTATCTGGATGCGCGGGGAGGGGCTGGTCATCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LLQSECAEVRLPQSR*KLSGCAGRGWSSLE
Trigger: CTCCAGGGATGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGACTCTGCGGTAGCCTCACCTCAGCGCATTCAGATTGTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS CCA 90 bp CAGCAGGCCCTCACCAGGCTGGTATTACAGTCCTGTCCAAGTGCCTaGAAGGCTGGGATTGACCTTGCCCAGTGCATGGAGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QQALTRLVLQSCPSA*KAGIDLAQCMERKS
Trigger: GCTTTTCCTCTCCATGCACTGGGCAAGGTCAATCCCAGCCTTCCAGGCACTTGGACAGGACTGTAATACCAGCCTGGTGAGGGCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGAAAAATGCCGGCCAGAGGCTTaGTCGCCACAGACCACACAG +
Preference number: 5 (lower is better)
Translates to: GKGKRWASVLPGPSPWEKCRPEA*SPQTTQ
Trigger: CTGTGTGGTCTGTGGCGACAAAGCCTCTGGCCGGCA...TTTTTCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CAA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTAGGCTGGGATTGACCTaGCCCAGTGCATGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAARLGLT*PSAWRG
Trigger: TCCTCTCCATGCACTGGGCAAGGTCAATCCCAGCCT...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GGCCCCTCTCCACATGCACCAGGAATAGGAACTCTCACTGCAGAAGCCACACTCAGGCTGGGATTGACCTaGCCCAGTGCATGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GPSPHAPGIGTLTAEATLRLGLT*PSAWRG
Trigger: TCCTCTCCATGCACTGGGCAAGGTCAATCCCAGCCT...GAGTGTGGCTTCTGCAGTGAGAGTTCCTATTCCTGGTGCATGTGGAGAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCCCTGGAAGGCTGGGATaGACCTTGCCCAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTPGRLG*TLPSAW
Trigger: CCATGCACTGGGCAAGGTCAATCCCAGCCTTCCAGG...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTGCTTGGTTTCTCCCGTaGCACATCAAAGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCAWFLP*HIKGLP
Trigger: CGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAGC...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGCTGCCAGGGACAAGGTaGTCCGAGGTGGTGAATATG +
Preference number: 5 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLLPGTR*SEVVNM
Trigger: CATATTCACCACCTCGGACAACCTTGTCCCTGGCAG...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTCTGCCAGGGACAAGGTaGTCCGAGGTGGTGAATATG +
Preference number: 5 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGLPGTR*SEVVNM
Trigger: CATATTCACCACCTCGGACAACCTTGTCCCTGGCAG...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCGTTGATGATGCAGTCTaGGCTGCTCCGACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSVDDAV*AAPTAV
Trigger: TACAGCTGTCGGAGCAGCCAAGACTGCATCATCAAC...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTGTTGATGATGCAGTCTaGGCTGCTCCGACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SLPLHLHSSRRHPTVGSCVDDAV*AAPTAV
Trigger: TACAGCTGTCGGAGCAGCCAAGACTGCATCATCAAC...ACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGCGGTTACGGTGGTGCTaGTTGATGATGCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWRLRWC*LMMQSW
Trigger: CCAAGACTGCATCATCAACAAGCACCACCGTAACCG...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCTCCCATCTGCCAGGCTaGGAGGTGAAGCACTATCTG +
Preference number: 5 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCSHLPG*EVKHYL
Trigger: CAGATAGTGCTTCACCTCCAAGCCTGGCAGATGGGA...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGTCCCATCTGCCAGGCTaGGAGGTGAAGCACTATCTG +
Preference number: 5 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLSHLPG*EVKHYL
Trigger: CAGATAGTGCTTCACCTCCAAGCCTGGCAGATGGGA...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCGTGAATATGAGCTGCTaGGCACTGGATGTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSVNMSC*ALDVSG
Trigger: TCCGGAAACATCCAGTGCCAAGCAGCTCATATTCAC...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGGTGAATATGAGCTGCTaGGCACTGGATGTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLVNMSC*ALDVSG
Trigger: TCCGGAAACATCCAGTGCCAAGCAGCTCATATTCAC...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCCGGTTACGGTGGTGCTaGTTGATGATGCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCRLRWC*LMMQSW
Trigger: CCAAGACTGCATCATCAACAAGCACCACCGTAACCG...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGTGGAAGCAGCACAATaGCTTGGTTTCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCVEAAQ*LGFSRC
Trigger: GCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCAC...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCCTAGAGCTCCTTGGCTaGTTTCAGCCTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCLELLG*FQPWNP
Trigger: CGGATTCCAAGGCTGAAACAAGCCAAGGAGCTCTAG...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGATGTGCTCCATCACTaGCTTTATCCGGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVDVLHH*LYPVTR
Trigger: TCTGGTGACCGGATAAAGCAAGTGATGGAGCACATC...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 90 bp ATCACCTTCCCAGTTCCAGCTCCATCTGGGCTGGTTAGGATGAACTaGTGTTTAGAGGATCCAGAGGCATCCACTGCGGTGACTATCTGG +
Preference number: 5 (lower is better)
Translates to: ITFPVPAPSGLVRMN*CLEDPEASTAVTIW
Trigger: CCAGATAGTCACCGCAGTGGATGCCTCTGGATCCTCTAAACAGCAGTTCATCCTAACCAGCCCAGATGGAGCTGGAACTGGGAAGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCGACTATCTGGATCTTTaGTCCTGTCTGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: TSLPLHLHSSRRHPTVGSDYLDL*SCLLVC
Trigger: ACAGACCAGCAGACAGGACAAAAGATCCAGATAGTC...GCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGTTACGGTGGTGCTTGTaGATGATGCAGTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLLRWCL*MMQSWL
Trigger: CAGCCAAGACTGCATCATCAACAAGCACCACCGTAA...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTTACGGTGGTGCTTGTaGATGATGCAGTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTLRWCL*MMQSWL
Trigger: CAGCCAAGACTGCATCATCAACAAGCACCACCGTAA...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTAAGCAGCACAATTGCTaGGTTTCTCCCGTTGCACAT +
Preference number: 5 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVKQHNC*VSPVAH
Trigger: ATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGGTGGAAGCAGCACAATaGCTTGGTTTCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: CTPRHCYTSLPLHLHSSRVEAAQ*LGFSRC
Trigger: GCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCAC...CCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGGAAGACCTGTTTGTCTaGCTCCATCTTTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLEDLFV*LHLCLP
Trigger: TGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTC...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTACGTATCAAAGGCTGTaGGATGTTCACAAGCATCCC +
Preference number: 5 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVTYQRL*DVHKHP
Trigger: GGGATGCTTGTGAACATCCAACAGCCTTTGATACGT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCGATGTGCTCCATCACTaGCTTTATCCGGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTDVLHH*LYPVTR
Trigger: TCTGGTGACCGGATAAAGCAAGTGATGGAGCACATC...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGATGTGCTCCATCACTaGCTTTATCCGGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: TLPFPCTCTVLGGIPLLADVLHH*LYPVTR
Trigger: TCTGGTGACCGGATAAAGCAAGTGATGGAGCACATC...TGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp ATCCGGTCACCAGAAAGCTTATCTTCCTGGATGCTGTTCTGTAGGTaGTTGACAATGGCTGCCAGGATGGTGGAGAGACTCATGACCTGG +
Preference number: 5 (lower is better)
Translates to: IRSPESLSSWMLFCR*LTMAARMVERLMTW
Trigger: CCAGGTCATGAGTCTCTCCACCATCCTGGCAGCCATTGTCAACCACCTACAGAACAGCATCCAGGAAGATAAGCTTTCTGGTGACCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTTTCCTCACGCTCCTTTaGAAGAAACCTTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAFLTLL*KKPLQP
Trigger: AGGTTGCAAAGGTTTCTTCAAAAGGAGCGTGAGGAA...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGACCTTCCCCCTGGGAAAAATTACGGTGGTGCTTGTaGATGATGCAGTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GKGKRWASVLPGPSPWEKLRWCL*MMQSWL
Trigger: CAGCCAAGACTGCATCATCAACAAGCACCACCGTAA...TTTTTCCCAGGGGGAAGGTCCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CAA 90 bp GCTACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGAAGCAGCACAATTGCTaGGTTTCTCCCGTTGCACAT +
Preference number: 5 (lower is better)
Translates to: ATLPFPCTCTVLGGIPLLKQHNC*VSPVAH
Trigger: ATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTT...CAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp ACTGGAGACACCTGTGCACACCAAGACACTGCTACACTTCCCTTCCCTTGCACCGAAGACCTGTTTGTCTaGCTCCATCTTTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: TGDTCAHQDTATLPFPCTEDLFV*LHLCLP
Trigger: TGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTC...GGTGCAAGGGAAGGGAAGTGTAGCAGTGTCTTGGTGTGCACAGGTGTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCGAAGACCTGTTTGTCTaGCTCCATCTTTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCEDLFV*LHLCLP
Trigger: TGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTC...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGAAAGATTCACTCAGGTaGGCCAAAGAGGTCACTACA +
Preference number: 5 (lower is better)
Translates to: PLHLHSSRRHPTVGSCWLKDSLR*AKEVTT
Trigger: TGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTT...CAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTAAAGATTCACTCAGGTaGGCCAAAGAGGTCACTACA +
Preference number: 5 (lower is better)
Translates to: PFPCTCTVLGGIPLLAAVKDSLR*AKEVTT
Trigger: TGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTT...AACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGATTTCTCAATCTGGCTaGTGCCTGTCAAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: LPLHLHSSRRHPTVGSCWISQSG*CLSNLD
Trigger: ATCCAGGTTTGACAGGCACAAGCCAGATTGAGAAAT...CCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS-3UTR CAA 90 bp CAGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATGATCAGATACTGGACTATCTGGATCTTTaGTCCTGTCTGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: QRGYTTPTQLQVLNDQILDYLDL*SCLLVC
Trigger: ACAGACCAGCAGACAGGACAAAAGATCCAGATAGTC...CAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGAAGCAGCACAATTGCTaGGTTTCTCCCGTTGCACAT +
Preference number: 5 (lower is better)
Translates to: LTAEATLNLDNRSCQRVQKQHNC*VSPVAH
Trigger: ATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTT...CTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTATCAAGAAGACCTGTTaGTCTTGCTCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LPFPCTCTVLGGIPLLAAIKKTC*SCSIFV
Trigger: GACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT...AGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTCACTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGACGTATCAAAGGCTGTaGGATGTTCACAAGCATCCC +
Preference number: 5 (lower is better)
Translates to: LTAEATLNLDNRSCQRVQTYQRL*DVHKHP
Trigger: GGGATGCTTGTGAACATCCAACAGCCTTTGATACGT...CTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CAGCGAGGATACACAACCCCCACCCAGCTGCAGGTTCTGAATGATCAGATACTGACGTATCAAAGGCTGTaGGATGTTCACAAGCATCCC +
Preference number: 5 (lower is better)
Translates to: QRGYTTPTQLQVLNDQILTYQRL*DVHKHP
Trigger: GGGATGCTTGTGAACATCCAACAGCCTTTGATACGT...CAGTATCTGATCATTCAGAACCTGCAGCTGGGTGGGGGTTGTGTATCCTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTAAAGATTCACTCAGGTaGGCCAAAGAGGTCACTACA +
Preference number: 5 (lower is better)
Translates to: PCTCTVLGGIPLLAAVGCKDSLR*AKEVTT
Trigger: TGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTT...ACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TACACTTCCCTTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCTCTGAAGCATCACCGTaGTTCAAAGATTCACTCAGG +
Preference number: 5 (lower is better)
Translates to: YTSLPLHLHSSRRHPTVGSEASP*FKDSLR
Trigger: CCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGA...GCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAAGGGAAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTCCCTTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTCTGAAGCATCACCGTaGTTCAAAGATTCACTCAGG +
Preference number: 5 (lower is better)
Translates to: FPCTCTVLGGIPLLAAVGSEASP*FKDSLR
Trigger: CCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGA...ACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTCTCCGTAATTGGAGATAGGCAAAGGAAAGAGGTGGGCATCTGTCTTACCAGGTCCCATCTGCCAGGCTaGGAGGTGAAGCACTATCTG +
Preference number: 5 (lower is better)
Translates to: FSVIGDRQRKEVGICLTRSHLPG*EVKHYL
Trigger: CAGATAGTGCTTCACCTCCAAGCCTGGCAGATGGGA...CCTGGTAAGACAGATGCCCACCTCTTTCCTTTGCCTATCTCCAATTACGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CAA 90 bp TTGCACCTGCACAGTTCTAGGAGGCATCCCACTGTTGGCAGCTGTTGGTTGTGCAGTTCTTCTGTTATGTaGGAGCTCATGAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LHLHSSRRHPTVGSCWLCSSSVM*ELMSLS
Trigger: ACTCAGGCTCATGAGCTCCAACATAACAGAAGAACT...GCACAACCAACAGCTGCCAACAGTGGGATGCCTCCTAGAACTGTGCAGGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS CCA 90 bp TCCGCGGCCAGGAGAACTGTACCATCCTCACGTATCAAAGGCTGTTaGATGTTCACAAGCATCCCTGGATCAAGAAGACCTGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SAARRTVPSSRIKGC*MFTSIPGSRRPVCL
Trigger: AAGACAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAACAGCCTTTGATACGTGAGGATGGTACAGTTCTCCTGGCCGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GTTATATCCCCTGCACACAATGCCAGGAATCCACATTTTACTCACAGGAATTTATGCCGGCCAGAGGCTTaGTCGCCACAGACCACACAG +
Preference number: 5 (lower is better)
Translates to: VISPAHNARNPHFTHRNLCRPEA*SPQTTQ
Trigger: CTGTGTGGTCTGTGGCGACAAAGCCTCTGGCCGGCA...TAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS TCA 90 bp TGCCCGAGTAATCTCACTTGCAGACTGGTCCTCTGGCTGCATTTCTaGAGCATCACCGTTGTTCAAAGATTCACTCAGGTTGGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: CPSNLTCRLVLWLHF*SITVVQRFTQVGQR
Trigger: TCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGATTACTCGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CTGCAGAAGCCACACTCAACCTGGACAACAGGTCATGTCAAAGGGTGCAGTCAATTCCTCACGCTCCTTTaGAAGAAACCTTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: LQKPHSTWTTGHVKGCSQFLTLL*KKPLQP
Trigger: AGGTTGCAAAGGTTTCTTCAAAAGGAGCGTGAGGAA...TTGACTGCACCCTTTGACATGACCTGTTGTCCAGGTTGAGTGTGGCTTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GTTAAGGGAACCTTGCAACCCCAATATCTATTCACATTAGCAACGCTAGCATCAAGGCTGGGATTGACCTaGCCCAGTGCATGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: VKGTLQPQYLFTLATLASRLGLT*PSAWRG
Trigger: TCCTCTCCATGCACTGGGCAAGGTCAATCCCAGCCT...TGATGCTAGCGTTGCTAATGTGAATAGATATTGGGGTTGCAAGGTTCCCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS GCA 90 bp GTGTCAAATGCCCGAGTAATCTCACTTGCAGACTGGTCCTCTGGCTaGATTTCTGAAGCATCACCGTTGTTCAAAGATTCACTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VSNARVISLADWSSG*ISEASPLFKDSLRL
Trigger: CAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGATTACTCGGGCATTTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp ACCATCCTCACGTATCAAAGGCTGTTGGATGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTGTCTTGCTCCATCTTTGTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: TILTYQRLLDVHKHP*IKKTCLSCSIFVCH
Trigger: GTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAACAGCCTTTGATACGTGAGGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp GCTTTCGCTAAGGTGTCAAATGCCCGAGTAATCTCACTTGCAGACTaGTCCTCTGGCTGCATTTCTGAAGCATCACCGTTGTTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: AFAKVSNARVISLAD*SSGCISEASPLFKD
Trigger: ATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGATTACTCGGGCATTTGACACCTTAGCGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp CAGGCGGGATGCAGACTCACAGATGTAATGTACATTGAGGTACTCTaGCATAGGACTGGGCATTGTAAGCTTGAATGTGACATGTGTGTC +
Preference number: 5 (lower is better)
Translates to: QAGCRLTDVMYIEVL*HRTGHCKLECDMCV
Trigger: GACACACATGTCACATTCAAGCTTACAATGCCCAGTCCTATGCCAGAGTACCTCAATGTACATTACATCTGTGAGTCTGCATCCCGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp AGACTGGCTCCAGTGATCTGGCCATTATATTCTGCTGTCTCCATCTTGAGGATGGACTATCTGGATCTTTaGTCCTGTCTGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: RLAPVIWPLYSAVSILRMDYLDL*SCLLVC
Trigger: ACAGACCAGCAGACAGGACAAAAGATCCAGATAGTC...CATCCTCAAGATGGAGACAGCAGAATATAATGGCCAGATCACTGGAGCCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS CCA 90 bp GACCTGTTTGTCTTGCTCCATCTTTGTCTGCCACAAATGTGGGAGTaGCTATCAGAGGACTTCTCAGGTCTTTCCGGATATAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: DLFVLLHLCLPQMWE*LSEDFSGLSGYRSS
Trigger: AGAAGATCTATATCCGGAAAGACCTGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGGCAGACAAAGATGGAGCAAGACAAACAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp CAAGAAGACCTGTTTGTCTTGCTCCATCTTTGTCTGCCACAAATGTaGGAGTGGCTATCAGAGGACTTCTCAGGTCTTTCCGGATATAGA +
Preference number: 5 (lower is better)
Translates to: QEDLFVLLHLCLPQM*EWLSEDFSGLSGYR
Trigger: TCTATATCCGGAAAGACCTGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 90 bp GCTGCATTTCTGAAGCATCACCGTTGTTCAAAGATTCACTCAGGTTaGCCAAAGAGGTCACTACATTTGCCAGTGTACCTAGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: AAFLKHHRCSKIHSG*PKRSLHLPVYLELL
Trigger: AAGGAGCTCTAGGTACACTGGCAAATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GTTATATCCCCTGCACACAATGCCAGGAATCCACATTTTACTCACAGGAATTTAGCTTGGTTTCTCCCGTaGCACATCAAAGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: VISPAHNARNPHFTHRNLAWFLP*HIKGLP
Trigger: CGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAGC...TAAATTCCTGTGAGTAAAATGTGGATTCCTGGCATTGTGTGCAGGGGATATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCCTGCCAGGGACAAGGTaGTCCGAGGTGGTGAATATG +
Preference number: 5 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVLPGTR*SEVVNM
Trigger: CATATTCACCACCTCGGACAACCTTGTCCCTGGCAG...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp AAGAATCCTGGCCAATCTGTAAGTATCTTCAGAGTAGGTTTTCTGCACATAGTCCGGTTACGGTGGTGCTaGTTGATGATGCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: KNPGQSVSIFRVGFLHIVRLRWC*LMMQSW
Trigger: CCAAGACTGCATCATCAACAAGCACCACCGTAACCG...GACTATGTGCAGAAAACCTACTCTGAAGATACTTACAGATTGGCCAGGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp CCATCCACATCTAATACTGACACTGACAAACTAGAAAACCATTCCAAGGGCATACTAGAGCTCCTTGGCTaGTTTCAGCCTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: PSTSNTDTDKLENHSKGILELLG*FQPWNP
Trigger: CGGATTCCAAGGCTGAAACAAGCCAAGGAGCTCTAG...TATGCCCTTGGAATGGTTTTCTAGTTTGTCAGTGTCAGTATTAGATGTGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CAA 90 bp AAGAATCCTGGCCAATCTGTAAGTATCTTCAGAGTAGGTTTTCTGCACATAGTCCTAGAGCTCCTTGGCTaGTTTCAGCCTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: KNPGQSVSIFRVGFLHIVLELLG*FQPWNP
Trigger: CGGATTCCAAGGCTGAAACAAGCCAAGGAGCTCTAG...GACTATGTGCAGAAAACCTACTCTGAAGATACTTACAGATTGGCCAGGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCGTTGATGATGCAGTCTaGGCTGCTCCGACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVVDDAV*AAPTAV
Trigger: TACAGCTGTCGGAGCAGCCAAGACTGCATCATCAAC...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TTTTATATAGTGTGGATGCTGCTGCTCCATTTGAAAGCCATACTGACCACCCTGATTTCTCAATCTGGCTaGTGCCTGTCAAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: FYIVWMLLLHLKAILTTLISQSG*CLSNLD
Trigger: ATCCAGGTTTGACAGGCACAAGCCAGATTGAGAAAT...CAGGGTGGTCAGTATGGCTTTCAAATGGAGCAGCAGCATCCACACTATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CAA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCTTCCTCACGCTCCTTTaGAAGAAACCTTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVFLTLL*KKPLQP
Trigger: AGGTTGCAAAGGTTTCTTCAAAAGGAGCGTGAGGAA...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCAGTTCTTCTGTTATGTaGGAGCTCATGAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVSSSVM*ELMSLS
Trigger: ACTCAGGCTCATGAGCTCCAACATAACAGAAGAACT...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113460.8
CDS-3UTR CAA 90 bp GGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTGCTATTGTCATCAAGAAGACCTGTTaGTCTTGCTCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: GVKTFLRAGKSSSLVAIVIKKTC*SCSIFV
Trigger: GACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT...GACAATAGCAACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS-3UTR CAA 90 bp TCACCAAAAGGTGTTAAAACATTTCTTAGGGCAGGGAAGAGTTCATCTTTAGTTATCAAGAAGACCTGTTaGTCTTGCTCCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SPKGVKTFLRAGKSSSLVIKKTC*SCSIFV
Trigger: GACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT...AACTAAAGATGAACTCTTCCCTGCCCTAAGAAATGTTTTAACACCTTTTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000146175.2
CDS CCA 72 bp CCACAGACCACACAGTACTCCACCACCTGGGGCCGCTaGACGTCTGCCTTCCCCAGCAAACGCTCCACAGAA +
Preference number: 6 (lower is better)
Translates to: PQTTQYSTTWGR*TSAFPSKRSTE
Trigger: TTCTGTGGAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGTGGAGTACTGTGTGGTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp CACACAGTACTCCACCACCTGGGGCCGCTGGACGTCTaGCTTCCCCAGCAAACGCTCCACAGAAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: HTVLHHLGPLDV*LPQQTLHRSRI
Trigger: GATTCTGCTTCTGTGGAGCGTTTGCTGGGGAAGGCAGACGTCCAGCGGCCCCAGGTGGTGGAGTACTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp AGTCGGTGGAAATTATCTGGATGCGCGGGGAGGGGCTaGTCATCCCTGGAGATTCCGGCCAAGAGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SRWKLSGCAGRG*SSLEIPAKRSV
Trigger: CACAGACCTCTTGGCCGGAATCTCCAGGGATGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113463.8
CDS CCA 72 bp TCTGAATGCGCTGAGGTGAGGCTACCGCAGAGTCGGTaGAAATTATCTGGATGCGCGGGGAGGGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SECAEVRLPQSR*KLSGCAGRGWS
Trigger: TGACCAGCCCCTCCCCGCGCATCCAGATAATTTCCACCGACTCTGCGGTAGCCTCACCTCAGCGCATTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp CTCACCAGGCTGGTATTACAGTCCTGTCCAAGTGCCTaGAAGGCTGGGATTGACCTTGCCCAGTGCATGGAG +
Preference number: 6 (lower is better)
Translates to: LTRLVLQSCPSA*KAGIDLAQCME
Trigger: CTCCATGCACTGGGCAAGGTCAATCCCAGCCTTCCAGGCACTTGGACAGGACTGTAATACCAGCCTGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp CCAGTTCCAGCTCCATCTGGGCTGGTTAGGATGAACTaGTGTTTAGAGGATCCAGAGGCATCCACTGCGGTG +
Preference number: 6 (lower is better)
Translates to: PVPAPSGLVRMN*CLEDPEASTAV
Trigger: CACCGCAGTGGATGCCTCTGGATCCTCTAAACAGCAGTTCATCCTAACCAGCCCAGATGGAGCTGGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 90 bp CGGTCACCAGAAAGCTTATCTTCCTGGATGCTGTTCTGTAGGTGGTaGACAATGGCTGCCAGGATGGTGGAGAGACTCATGACCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RSPESLSSWMLFCRW*TMAARMVERLMTWA
Trigger: TGCCCAGGTCATGAGTCTCTCCACCATCCTGGCAGCCATTGTCAACCACCTACAGAACAGCATCCAGGAAGATAAGCTTTCTGGTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp CCAGAAAGCTTATCTTCCTGGATGCTGTTCTGTAGGTaGTTGACAATGGCTGCCAGGATGGTGGAGAGACTC +
Preference number: 6 (lower is better)
Translates to: PESLSSWMLFCR*LTMAARMVERL
Trigger: GAGTCTCTCCACCATCCTGGCAGCCATTGTCAACCACCTACAGAACAGCATCCAGGAAGATAAGCTTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS TCA 72 bp TGTCTGCTGGTCTGTTACAATCTGAATGCGCTGAGGTaGGGCTACCGCAGAGTCGGTGGAAATTATCTGGAT +
Preference number: 6 (lower is better)
Translates to: CLLVCYNLNALR*GYRRVGGNYLD
Trigger: ATCCAGATAATTTCCACCGACTCTGCGGTAGCCTCACCTCAGCGCATTCAGATTGTAACAGACCAGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS TCA 72 bp AGGAGAGGGCCTTCAACTTCAATGATGGGTGTTGACTaGTCTCTGCTGATGACATGGATACTCCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RRGPSTSMMGVD*SLLMTWILPPP
Trigger: TGGAGGAGGGAGTATCCATGTCATCAGCAGAGATCAGTCAACACCCATCATTGAAGTTGAAGGCCCTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp TCAGTGGAAGCAGCACAATTGCTTGGTTTCTCCCGTTaGACATCAAAGGGCTTCCGTTCACTCTGTACAGAC +
Preference number: 6 (lower is better)
Translates to: SVEAAQLLGFSR*TSKGFRSLCTD
Trigger: GTCTGTACAGAGTGAACGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp AAGGTGTCAAATGCCCGAGTAATCTCACTTGCAGACTaGTCCTCTGGCTGCATTTCTGAAGCATCACCGTTG +
Preference number: 6 (lower is better)
Translates to: KVSNARVISLAD*SSGCISEASPL
Trigger: CAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGATTACTCGGGCATTTGACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 72 bp TCCAGAGGCATCCACTGCGGTGACTATCTGGATCTTTaGTCCTGTCTGCTGGTCTGTTACAATCTGAATGCG +
Preference number: 6 (lower is better)
Translates to: SRGIHCGDYLDL*SCLLVCYNLNA
Trigger: CGCATTCAGATTGTAACAGACCAGCAGACAGGACAAAAGATCCAGATAGTCACCGCAGTGGATGCCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 72 bp CTCAGTGGAAGCAGCACAATTGCTTGGTTTCTCCCGTaGCACATCAAAGGGCTTCCGTTCACTCTGTACAGA +
Preference number: 6 (lower is better)
Translates to: LSGSSTIAWFLP*HIKGLPFTLYR
Trigger: TCTGTACAGAGTGAACGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 72 bp GACTGGTCCTCTGGCTGCATTTCTGAAGCATCACCGTaGTTCAAAGATTCACTCAGGTTGGCCAAAGAGGTC +
Preference number: 6 (lower is better)
Translates to: DWSSGCISEASP*FKDSLRLAKEV
Trigger: GACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp GCCCGAGTAATCTCACTTGCAGACTGGTCCTCTGGCTaGATTTCTGAAGCATCACCGTTGTTCAAAGATTCA +
Preference number: 6 (lower is better)
Translates to: ARVISLADWSSG*ISEASPLFKDS
Trigger: TGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGATTACTCGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp ATGCGTACTCATAGCCGTCTATATCCAGTTTCGCCATaGTGTTACAGAACTCCTGCAGCTTCCAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: MRTHSRLYPVSP*CYRTPAASRCA
Trigger: AGCACATCTGGAAGCTGCAGGAGTTCTGTAACAGCATGGCGAAACTGGATATAGACGGCTATGAGTACGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
CDS CCA 72 bp TTAGAGGATCCAGAGGCATCCACTGCGGTGACTATCTaGATCTTTTGTCCTGTCTGCTGGTCTGTTACAATC +
Preference number: 6 (lower is better)
Translates to: LEDPEASTAVTI*IFCPVCWSVTI
Trigger: GATTGTAACAGACCAGCAGACAGGACAAAAGATCCAGATAGTCACCGCAGTGGATGCCTCTGGATCCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp GTCTTGCTCCATCTTTGTCTGCCACAAATGTGGGAGTaGCTATCAGAGGACTTCTCAGGTCTTTCCGGATAT +
Preference number: 6 (lower is better)
Translates to: VLLHLCLPQMWE*LSEDFSGLSGY
Trigger: ATATCCGGAAAGACCTGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGGCAGACAAAGATGGAGCAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp CTGTTTGTCTTGCTCCATCTTTGTCTGCCACAAATGTaGGAGTGGCTATCAGAGGACTTCTCAGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: LFVLLHLCLPQM*EWLSEDFSGLS
Trigger: GGAAAGACCTGAGAAGTCCTCTGATAGCCACTCCCACATTTGTGGCAGACAAAGATGGAGCAAGACAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 90 bp GGCTGCATTTCTGAAGCATCACCGTTGTTCAAAGATTCACTCAGGTaGGCCAAAGAGGTCACTACATTTGCCAGTGTACCTAGAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GCISEASPLFKDSLR*AKEVTTFASVPRAP
Trigger: AGGAGCTCTAGGTACACTGGCAAATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 90 bp CGTTGTTCAAAGATTCACTCAGGTTGGCCAAAGAGGTCACTACATTaGCCAGTGTACCTAGAGCTCCTTGGCTTGTTTCAGCCTTGGAAT +
Preference number: 6 (lower is better)
Translates to: RCSKIHSGWPKRSLH*PVYLELLGLFQPWN
Trigger: ATTCCAAGGCTGAAACAAGCCAAGGAGCTCTAGGTACACTGGCAAATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 90 bp TCACTTGCAGACTGGTCCTCTGGCTGCATTTCTGAAGCATCACCGTaGTTCAAAGATTCACTCAGGTTGGCCAAAGAGGTCACTACATTT +
Preference number: 6 (lower is better)
Translates to: SLADWSSGCISEASP*FKDSLRLAKEVTTF
Trigger: AAATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp TGGATGATTCATAGCCGTCTATATCCAGTTTCGCCATaGTGTTACAGAACTCCTGCAGCTTCCAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: WMIHSRLYPVSP*CYRTPAASRCA
Trigger: AGCACATCTGGAAGCTGCAGGAGTTCTGTAACAGCATGGCGAAACTGGATATAGACGGCTATGAATCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146175.2
CDS CCA 72 bp AGGAGAACTGTACCATCCTCACGTATCAAAGGCTGTTaGATGTTCACAAGCATCCCTGGATCAAGAAGACCT +
Preference number: 6 (lower is better)
Translates to: RRTVPSSRIKGC*MFTSIPGSRRP
Trigger: AGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAACAGCCTTTGATACGTGAGGATGGTACAGTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 90 bp ATAGATCTTCTCAGTGGAAGCAGCACAATTGCTTGGTTTCTCCCGTaGCACATCAAAGGGCTTCCGTTCACTCTGTACAGACTCCATTTT +
Preference number: 6 (lower is better)
Translates to: IDLLSGSSTIAWFLP*HIKGLPFTLYRLHF
Trigger: AAAATGGAGTCTGTACAGAGTGAACGGAAGCCCTTTGATGTGCAACGGGAGAAACCAAGCAATTGTGCTGCTTCCACTGAGAAGATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS TCA 72 bp AATCTCACTTGCAGACTGGTCCTCTGGCTGCATTTCTaGAGCATCACCGTTGTTCAAAGATTCACTCAGGTT +
Preference number: 6 (lower is better)
Translates to: NLTCRLVLWLHF*SITVVQRFTQV
Trigger: AACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGAAATGCAGCCAGAGGACCAGTCTGCAAGTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp ATCAAGAAGACCTGTTTGTCTTGCTCCATCTTTGTCTaGCACAAATGTGGGAGTGGCTATCAGAGGACTTCT +
Preference number: 6 (lower is better)
Translates to: IKKTCLSCSIFV*HKCGSGYQRTS
Trigger: AGAAGTCCTCTGATAGCCACTCCCACATTTGTGGCAGACAAAGATGGAGCAAGACAAACAGGTCTTCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp CTGAAGCATCACCGTTGTTCAAAGATTCACTCAGGTTaGCCAAAGAGGTCACTACATTTGCCAGTGTACCTA +
Preference number: 6 (lower is better)
Translates to: LKHHRCSKIHSG*PKRSLHLPVYL
Trigger: TAGGTACACTGGCAAATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CAA 72 bp TCTGAAGCATCACCGTTGTTCAAAGATTCACTCAGGTaGGCCAAAGAGGTCACTACATTTGCCAGTGTACCT +
Preference number: 6 (lower is better)
Translates to: SEASPLFKDSLR*AKEVTTFASVP
Trigger: AGGTACACTGGCAAATGTAGTGACCTCTTTGGCCAACCTGAGTGAATCTTTGAACAACGGTGATGCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp ACGTATCAAAGGCTGTTGGATGTTCACAAGCATCCCTaGATCAAGAAGACCTGTTTGTCTTGCTCCATCTTT +
Preference number: 6 (lower is better)
Translates to: TYQRLLDVHKHP*IKKTCLSCSIF
Trigger: AAAGATGGAGCAAGACAAACAGGTCTTCTTGATCCAGGGATGCTTGTGAACATCCAACAGCCTTTGATACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS CCA 72 bp TGCAGACTCACAGATGTAATGTACATTGAGGTACTCTaGCATAGGACTGGGCATTGTAAGCTTGAATGTGAC +
Preference number: 6 (lower is better)
Translates to: CRLTDVMYIEVL*HRTGHCKLECD
Trigger: GTCACATTCAAGCTTACAATGCCCAGTCCTATGCCAGAGTACCTCAATGTACATTACATCTGTGAGTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8
ENSMUST00000146175.2
CDS GCA 72 bp ATGATCGGGACTAAAGAGAACTATAGCTTTAAGGTATaGGTACTCATAGCCGTCTATATCCAGTTTCGCCAT +
Preference number: 6 (lower is better)
Translates to: MIGTKENYSFKV*VLIAVYIQFRH
Trigger: ATGGCGAAACTGGATATAGACGGCTATGAGTACGCATACCTTAAAGCTATAGTTCTCTTTAGTCCCGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113460.8
ENSMUST00000113463.8