Pregenerated sensors for NR2C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005897Ensembl transcript IDs: ENSMUST00000092213.11, ENSMUST00000099343.2, ENSMUST00000105290.9
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTaGTTTCTTGTGTCCCGAGAAGGAACAGTAAACTTAGTTCATAGC | + |
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Preference number: 1 (lower is better) Translates to: LTVTIRRLPGSNSSI*FLVSREGTVNLVHS Trigger: GCTATGAACTAAGTTTACTGTTCCTTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR CCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTaGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: TFNFGYSYSYYSQTP*KQQLHLVSCVPRRN Trigger: GTTCCTTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR TCA 90 bp | GCTTATTATCTTGAGATGATAAAGGTATCAAAGGAGCCAACATTTTaGCACTGTGATATGACATCGTCATCTACAGATGTGCTGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: AYYLEMIKVSKEPTF*HCDMTSSSTDVLGC Trigger: GCATCCCAGCACATCTGTAGATGACGATGTCATATCACAGTGTCAAAATGTTGGCTCCTTTGATACCTTTATCATCTCAAGATAATAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR-3UTR TCA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTCCCTGCCTGGTCGCTTaGTTTCTTCTTAAGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGPCLVA*FLLKES Trigger: GGATTCCTTAAGAAGAAATCAAGCGACCAGGCAGGG...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGAGACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTAGCAACAGCTCCATTTaGTTTCTTGTGTCCCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SGGDSLRCHPHQEQPSTFSNSSI*FLVSRE Trigger: TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCT...AAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTCTCCTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTGCCTGGTCGCTTaGTTTCTTCTTAAGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: DSLRCHPHQEQPSTFLNHPCLVA*FLLKES Trigger: GGATTCCTTAAGAAGAAATCAAGCGACCAGGCAGGG...ATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGATTTACTAAAGGAATCCATTATAAAATCAGTACAAAGAGCGACTGATGCCAGCAACAGCTCCATTTaGTTTCTTGTGTCCCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TDLLKESIIKSVQRATDASNSSI*FLVSRE Trigger: TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCT...GGCATCAGTCGCTCTTTGTACTGATTTTATAATGGATTCCTTTAGTAAATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR-3UTR CAA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTGCTCCATTTGGTTTCTaGTGTCCCGAGAAGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGAPFGF*CPEKEQ Trigger: CTGTTCCTTCTCGGGACACAAGAAACCAAATGGAGC...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR TCA 72 bp | ATGCAGGTTACACATGCCCTACTGAGACTTTCTGCGTaGGCATTTTATGCTCTATGCACTATTCCCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: MQVTHALLRLSA*AFYALCTIPWQ Trigger: CTGCCAGGGAATAGTGCATAGAGCATAAAATGCTCACGCAGAAAGTCTCAGTAGGGCATGTGTAACCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR GCA 72 bp | TGGGATGCAGGTTACACATGCCCTACTGAGACTTTCTaGGTGAGCATTTTATGCTCTATGCACTATTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: WDAGYTCPTETF*VSILCSMHYSL Trigger: CAGGGAATAGTGCATAGAGCATAAAATGCTCACGCAGAAAGTCTCAGTAGGGCATGTGTAACCTGCATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR GCA 72 bp | ACATGCCCTACTGAGACTTTCTGCGTGAGCATTTTATaGTCTATGCACTATTCCCTGGCAGCTTCTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: TCPTETFCVSIL*SMHYSLAASYK Trigger: TTTATAAGAAGCTGCCAGGGAATAGTGCATAGAGCATAAAATGCTCACGCAGAAAGTCTCAGTAGGGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR TCA 72 bp | AAAGGAATCCATTATAAAATCAGTACAAAGAGCGACTaGTGCCTGTCATATTGGTGTGGAAGACTGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: KGIHYKISTKSD*CLSYWCGRLRS Trigger: ACTCCTCAGTCTTCCACACCAATATGACAGGCATCAGTCGCTCTTTGTACTGATTTTATAATGGATTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGATTTACTAAAGGAATCCATTATAAAATCAGTACAAAGAGCGACTGATGCCCACCTTGGAACCATATaGGCTTTGATAATTGCATTA | + |
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Preference number: 3 (lower is better) Translates to: TDLLKESIIKSVQRATDAHLGTI*ALIIAL Trigger: TAATGCAATTATCAAAGCCAATATGGTTCCAAGGTG...GGCATCAGTCGCTCTTTGTACTGATTTTATAATGGATTCCTTTAGTAAATCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| 3UTR GCA 72 bp | CACTATGAAAGAAAATACAAATGGCTTGTGTCTCATTaGCAGCAACGAGAGTGTTATATGCTTGATGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: HYERKYKWLVSH*QQRECYMLDVY Trigger: ATAAACATCAAGCATATAACACTCTCGTTGCTGGCAATGAGACACAAGCCATTTGTATTTTCTTTCATAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | CAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTGCGGGCTTCCCTCCATaGCCTCTTCTGGGCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QLLFADSLEATAPFGFLCAGFPP*PLLGSG Trigger: GCCAGAGCCCAGAAGAGGGCATGGAGGGAAGCCCGC...ACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGCGGCGTCTGGAGTTGTaGGGAAGACTTTCCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQRRLEL*GRLSLA Trigger: CGCCAGGGAAAGTCTTCCTCACAACTCCAGACGCCG...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTGAGCTGGAGGTGCGGTaGGGACAGATCAGGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGELEVR*GQIRTG Trigger: ACCAGTCCTGATCTGTCCGCACCGCACCTCCAGCTC...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | GACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATGCGGGCTTCCCTCCATaGCCTCTTCTGGGCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: DSLRCHPHQEQPSTFLNHAGFPP*PLLGSG Trigger: GCCAGAGCCCAGAAGAGGGCATGGAGGGAAGCCCGC...ATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CCA 90 bp | GACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTCTTCTGGGCTCTaGCAGGCGGAGCTTTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: DSLRCHPHQEQPSTFLNHPSSGL*QAELSP Trigger: CGGCGAAAGCTCCGCCTGCCAGAGCCCAGAAGAGGG...ATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAACGTGGTTTGCCAGAATaGACTGCTTGCCCTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSRERGLPE*TACPVC Trigger: GCACACAGGGCAAGCAGTTCATTCTGGCAAACCACG...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAAAAGGCAATGCACCTCTaGAGCCTGCAGTACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREKAMHL*SLQYWQ Trigger: CTGCCAGTACTGCAGGCTGCAGAGGTGCATTGCCTT...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCAGCCTGAAAGCTACGTaGGACTCGCTCAGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LLQLLFADSLEATAPFGFSLKAT*DSLSSG Trigger: GCCGCTGCTGAGCGAGTCGCACGTAGCTTTCAGGCT...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CCA 90 bp | TCAGGAGGAGACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTTTGCCCTGTGTGCTGTaGTCAAGTGCTGTCACGATC | + |
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Preference number: 4 (lower is better) Translates to: SGGDSLRCHPHQEQPSTFLPCVL*SSAVTI Trigger: GATCGTGACAGCACTTGACCACAGCACACAGGGCAA...AAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTCTCCTCCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CCA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGACATGTTCTCCAGGCCTaGGTGATCGGGACTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRHVLQA*VIGTEE Trigger: CTCTTCAGTCCCGATCACCCAGGCCTGGAGAACATG...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | TCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTCGGCGTCTGGAGTTGTaGGGAAGACTTTCCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SYSYYSQTPWKQQLHLVSRRLEL*GRLSLA Trigger: CGCCAGGGAAAGTCTTCCTCACAACTCCAGACGCCG...AGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | TACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGAGCTGGAGGTGCGGTaGGGACAGATCAGGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: YSYYSQTPWKQQLHLVSCELEVR*GQIRTG Trigger: ACCAGTCCTGATCTGTCCGCACCGCACCTCCAGCTC...ACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAACCACACTGGCCAATGTaGTTAAGTCTCCCTGACACG | + |
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Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREPHWPM*LSLPDT Trigger: CGTGTCAGGGAGACTTAAGCACATTGGCCAGTGTGG...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | GACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATAGCCTGAAAGCTACGTaGGACTCGCTCAGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: DSLRCHPHQEQPSTFLNHSLKAT*DSLSSG Trigger: GCCGCTGCTGAGCGAGTCGCACGTAGCTTTCAGGCT...ATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CCA 90 bp | CTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTTGCAGCCTGCAGTACTaGCAGCGGTTTCGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LTVTIRRLPGSNSSIWFLCSLQY*QRFRWC Trigger: GCACCACCGAAACCGCTGCCAGTACTGCAGGCTGCA...AAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CCA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGCATGTTCTCCAGGCCTaGGTGATCGGGACTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQHVLQA*VIGTEE Trigger: CTCTTCAGTCCCGATCACCCAGGCCTGGAGAACATG...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCCGTGGTTTGCCAGAATaGACTGCTTGCCCTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLQLLFADSLEATAPFGFRGLPE*TACPVC Trigger: GCACACAGGGCAAGCAGTTCATTCTGGCAAACCACG...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | TCAGGAGGAGACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTGTGCTTAAGTCTCCCTaGCACGATTCAGCCTTATCT | + |
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Preference number: 4 (lower is better) Translates to: SGGDSLRCHPHQEQPSTFVLKSP*HDSALS Trigger: AGATAAGGCTGAATCGTGTCAGGGAGACTTAAGCAC...AAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTCTCCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGATTCGCTAATGATGTaGCCACACTGGCCAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRDSLMM*PHWPMC Trigger: GCACATTGGCCAGTGTGGTCACATCATTAGCGAATC...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTGGATCCCTCGTGGTTTaGCAGAATGAACTGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGGSLVV*QNELLA Trigger: GGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCC...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | CAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCAACTGGTTGACACCTaGGGCGTCTGGAGTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: QLLFADSLEATAPFGFLCQLVDT*GVWSCE Trigger: CTCACAACTCCAGACGCCGCAGGTGTCAACCAGTTG...ACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | TCAGGAGGAGACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTCAGCGGTTTCGGTGGTaGTTATTGATAACGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SGGDSLRCHPHQEQPSTFQRFRW*LLITQS Trigger: AGACTGCGTTATCAATAAGCACCACCGAAACCGCTG...AAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTCTCCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | TTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTGCACCTCTGCAGCCTaGAGTACTGGCAGCGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FGYSYSYYSQTPWKQQLHCTSAA*STGSGF Trigger: GAAACCGCTGCCAGTACTGCAGGCTGCAGAGGTGCA...ATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCAAGGCAATGCACCTCTaGAGCCTGCAGTACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLQLLFADSLEATAPFGFKAMHL*SLQYWQ Trigger: CTGCCAGTACTGCAGGCTGCAGAGGTGCATTGCCTT...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAACCTGGAAAGAAGGTATaGAAAGTGCCCAGTGCATCG | + |
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Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREPGKKV*KVPSAS Trigger: CGATGCACTGGGCACTTTCCATACCTTCTTTCCAGG...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| 3UTR CAA 72 bp | GGGAGGCAGGAAGATAACGGCAAACTTGAGTTCAGCTaGGGCTGGGTAGCAAGATCCTGTCTCAAGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: GRQEDNGKLEFS*GWVARSCLKKT Trigger: TGTTTTCTTGAGACAGGATCTTGCTACCCAGCCCAAGCTGAACTCAAGTTTGCCGTTATCTTCCTGCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
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| CDS-3UTR TCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAAGTGCTTAAGTCTCCCTaGCACGATTCAGCCTTATCT | + |
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Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREVLKSP*HDSALS Trigger: AGATAAGGCTGAATCGTGTCAGGGAGACTTAAGCAC...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAATTCTGTCCAGTCTGCTaGTCTGTAACAATCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREFCPVC*SVTISP Trigger: GGGTGAGATTGTTACAGAGCAGCAGACTGGACAGAA...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGACTGCTTGCCCTGTGTaGTGTGGTCAAGTGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWTACPV*CGQVLS Trigger: TGACAGCACTTGACCACAGCACACAGGGCAAGCAGT...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | ACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGGGATCCCTCGTGGTTTaGCAGAATGAACTGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: TVTIRRLPGSNSSIWFLVGSLVV*QNELLA Trigger: GGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCC...CACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR GCA 90 bp | CTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTCAACTGGTTGACACCTaGGGCGTCTGGAGTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTVTIRRLPGSNSSIWFLQLVDT*GVWSCE Trigger: CTCACAACTCCAGACGCCGCAGGTGTCAACCAGTTG...AAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTTGGCAGCGGTTTCGGTaGTGCTTATTGATAACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGWQRFR*CLLITQ Trigger: CTGCGTTATCAATAAGCACCACCGAAACCGCTGCCA...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCGATTCGCTAATGATGTaGCCACACTGGCCAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLLFADSLEATAPFGFDSLMM*PHWPMC Trigger: GCACATTGGCCAGTGTGGTCACATCATTAGCGAATC...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGATATCCCCACCGCAGTaGGAAAGGTCTTTAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQISPPQ*ERSLAL Trigger: CAAAGCTAAAGACCTTTCTCACTGCGGTGGGGATAT...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | TCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTACTGCTTGCCCTGTGTaGTGTGGTCAAGTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSYYSQTPWKQQLHLVSTACPV*CGQVLS Trigger: TGACAGCACTTGACCACAGCACACAGGGCAAGCAGT...AGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTTTTGCCAGAATGAACTaGTTGCCCTGTGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLFADSLEATAPFGFLCFARMN*LPCVLW Trigger: CCACAGCACACAGGGCAAGCAGTTCATTCTGGCAAA...ACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | CTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTCCACACTGGCCAATGTaGTTAAGTCTCCCTGACACG | + |
|
Preference number: 4 (lower is better) Translates to: LTVTIRRLPGSNSSIWFLPHWPM*LSLPDT Trigger: CGTGTCAGGGAGACTTAAGCACATTGGCCAGTGTGG...AAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAAATGGAAAGTGCCCAGTaGATCGATAAGAACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREMESAQ*IDKNSS Trigger: ACTGCTGTTCTTATCGATGCACTGGGCACTTTCCAT...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | TACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTTTGCCCTGTGTGCTGTaGTCAAGTGCTGTCACGATC | + |
|
Preference number: 4 (lower is better) Translates to: YSYYSQTPWKQQLHLVSCLPCVL*SSAVTI Trigger: GATCGTGACAGCACTTGACCACAGCACACAGGGCAA...ACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTTCTGTTAAGAGCTaGAGGTGCGGTGCGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWFSVKS*RCGADR Trigger: TCTGTCCGCACCGCACCTCCAGCTCTTAACAGAAAA...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTTTCTGTTAAGAGCTaGAGGTGCGGTGCGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQLLFADSLEATAPFGFFSVKS*RCGADR Trigger: TCTGTCCGCACCGCACCTCCAGCTCTTAACAGAAAA...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTGGCAGCGGTTTCGGTaGTGCTTATTGATAACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVTIRRLPGSNSSIWFLVWQRFR*CLLITQ Trigger: CTGCGTTATCAATAAGCACCACCGAAACCGCTGCCA...CACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGATCACTTGCCAGCACTaGGCAAGACCAAGGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQITCQH*ARPRVK Trigger: TTTTACCCTTGGTCTTGCCCAGTGCTGGCAAGTGAT...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR TCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAAGGTTTTCTTTCACACTaGACAGAGTCTTGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSREGFLSH*TESCFI Trigger: GATGAAGCAAGACTCTGTTCAGTGTGAAAGAAAACC...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAATGCACCTCTGCAGCCTaGAGTACTGGCAGCGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQCTSAA*STGSGF Trigger: GAAACCGCTGCCAGTACTGCAGGCTGCAGAGGTGCA...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGGGGAGTCAGTGCTTTTaGAAGAGTGTCAAATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWGSQCF*KSVKCP Trigger: AGGGCATTTGACACTCTTGCAAAAGCACTGACTCCC...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTTCGCCGGGAGTCAGTaGTTTTGCAAGAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVTIRRLPGSNSSIWFLVFAGSQ*FCKSVK Trigger: TTTGACACTCTTGCAAAAGCACTGACTCCCGGCGAA...CACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTTTCGCCGGGAGTCAGTaGTTTTGCAAGAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLLFADSLEATAPFGFLCFAGSQ*FCKSVK Trigger: TTTGACACTCTTGCAAAAGCACTGACTCCCGGCGAA...ACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGCTTTTACCAGTGATATaGTGTTCTCCTGCCCTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWLLPVI*CSPALA Trigger: CGCTAGGGCAGGAGAACAGCATATCACTGGTAAAAG...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | CTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTATAAGAACAGCAGTCTaGAGGCCGACTCCCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTVTIRRLPGSNSSIWFLIRTAV*RPTPQC Trigger: ACATTGGGGAGTCGGCCTCCAGACTGCTGTTCTTAT...AAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATCCTGGAAAGAAGGTATaGAAAGTGCCCAGTGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: FGYSYSYYSQTPWKQQLHPGKKV*KVPSAS Trigger: CGATGCACTGGGCACTTTCCATACCTTCTTTCCAGG...ATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGATCACTTGCCAGCACTaGGCAAGACCAAGGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVTIRRLPGSNSSIWFLVITCQH*ARPRVK Trigger: TTTTACCCTTGGTCTTGCCCAGTGCTGGCAAGTGAT...CACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGACCTGTAGGTGTCATCTaGATATGTCCTGGTGATATA | + |
|
Preference number: 4 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRPVGVI*ICPGDI Trigger: TATATCACCAGGACATATCCAGATGACACCTACAGG...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR TCA 90 bp | TACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTATATCCCCACCGCAGTaGGAAAGGTCTTTAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSYYSQTPWKQQLHLVSCISPPQ*ERSLAL Trigger: CAAAGCTAAAGACCTTTCTCACTGCGGTGGGGATAT...ACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGAGACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTGTCGATAATTTGATGTaGAATTTCTTCTATGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGDSLRCHPHQEQPSTFVDNLM*NFFYGR Trigger: GCGACCATAGAAGAAATTGCACATCAAATTATCGAC...AAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTCTCCTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATGGGAGTCAGTGCTTTTaGAAGAGTGTCAAATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGYSYSYYSQTPWKQQLHGSQCF*KSVKCP Trigger: AGGGCATTTGACACTCTTGCAAAAGCACTGACTCCC...ATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | TACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTCTTTTACCAGTGATATaGTGTTCTCCTGCCCTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSYYSQTPWKQQLHLVSCLLPVI*CSPALA Trigger: CGCTAGGGCAGGAGAACAGCATATCACTGGTAAAAG...ACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAACTCGGGAAACTTCAATaGGTTTTCTTTCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRRLPGSNSSIWFLVSRELGKLQ*VFFHTE Trigger: TTCAGTGTGAAAGAAAACCCATTGAAGTTTCCCGAG...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGCCTGTAGGTGTCATCTaGATATGTCCTGGTGATATA | + |
|
Preference number: 4 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQPVGVI*ICPGDI Trigger: TATATCACCAGGACATATCCAGATGACACCTACAGG...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| 3UTR CAA 72 bp | TACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTaGGTTTCTTGTGTCCCGAGAAGGAACAGTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YYSQTPWKQQLH*VSCVPRRNSKL Trigger: AAGTTTACTGTTCCTTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATATGGAAAGTGCCCAGTaGATCGATAAGAACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FGYSYSYYSQTPWKQQLHMESAQ*IDKNSS Trigger: ACTGCTGTTCTTATCGATGCACTGGGCACTTTCCAT...ATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGACCTTATTTGGTCCCTaGTCAGGAGACTTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWTLFGP*SGDFSV Trigger: AACAGAAAAGTCTCCTGACCAGGGACCAAATAAGGT...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTATCAAAAACCTTATTTaGTCCCTGGTCAGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGIKNLI*SLVRRL Trigger: AAGTCTCCTGACCAGGGACCAAATAAGGTTTTTGAT...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAATTTGCCAGAATGAACTaGTTGCCCTGTGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQFARMN*LPCVLW Trigger: CCACAGCACACAGGGCAAGCAGTTCATTCTGGCAAA...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGCTCGGGAAACTTCAATaGGTTTTCTTTCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVTIRRLPGSNSSIWFLVLGKLQ*VFFHTE Trigger: TTCAGTGTGAAAGAAAACCCATTGAAGTTTCCCGAG...CACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTTGAAGCTGCACAGTTaGAAGATTTTTCTCGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVTIRRLPGSNSSIWFLVLKLHS*KIFLGK Trigger: TTTCCCGAGAAAAATCTTCCAACTGTGCAGCTTCAA...CACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAAATAAGAACAGCAGTCTaGAGGCCGACTCCCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQIRTAV*RPTPQC Trigger: ACATTGGGGAGTCGGCCTCCAGACTGCTGTTCTTAT...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTGTCGATAATTTGATGTaGAATTTCTTCTATGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLLFADSLEATAPFGFLCVDNLM*NFFYGR Trigger: GCGACCATAGAAGAAATTGCACATCAAATTATCGAC...ACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAATTCTGTCCAGTCTGCTaGTCTGTAACAATCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQFCPVC*SVTISP Trigger: GGGTGAGATTGTTACAGAGCAGCAGACTGGACAGAA...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAATGTGCTGTGGTCAAGTaGTGTCACGATCTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQCAVVK*CHDLDF Trigger: AAAATCCAGATCGTGACAGCACTTGACCACAGCACA...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR GCA 90 bp | ACAGATTTACTAAAGGAATCCATTATAAAATCAGTACAAAGAGCGACTGATGCCCAGCGGTTTCGGTGGTaGTTATTGATAACGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDLLKESIIKSVQRATDAQRFRW*LLITQS Trigger: AGACTGCGTTATCAATAAGCACCACCGAAACCGCTG...GGCATCAGTCGCTCTTTGTACTGATTTTATAATGGATTCCTTTAGTAAATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAAATCAAAAACCTTATTTaGTCCCTGGTCAGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQIKNLI*SLVRRL Trigger: AAGTCTCCTGACCAGGGACCAAATAAGGTTTTTGAT...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS GCA 90 bp | CCACGAAGCTTGGCTCTCCAGCGATTAGATGCGGGCTTCCCTCCATaGCCTCTTCTGGGCTCTGGCAGGCGGAGCTTTCGCCGGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSLALQRLDAGFPP*PLLGSGRRSFRRES Trigger: TGACTCCCGGCGAAAGCTCCGCCTGCCAGAGCCCAGAAGAGGGCATGGAGGGAAGCCCGCATCTAATCGCTGGAGAGCCAAGCTTCGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CCA 90 bp | CCAGCGATTAGATGCGGGCTTCCCTCCATGCCCTCTTCTGGGCTCTaGCAGGCGGAGCTTTCGCCGGGAGTCAGTGCTTTTGCAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAIRCGLPSMPSSGL*QAELSPGVSAFARV Trigger: CACTCTTGCAAAAGCACTGACTCCCGGCGAAAGCTCCGCCTGCCAGAGCCCAGAAGAGGGCATGGAGGGAAGCCCGCATCTAATCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS GCA 90 bp | TGGAGTTGTGAGGAAGACTTTCCCTGGCGTGGATCCCTCGTGGTTTaGCAGAATGAACTGCTTGCCCTGTGTGCTGTGGTCAAGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSCEEDFPWRGSLVV*QNELLALCAVVKCC Trigger: ACAGCACTTGACCACAGCACACAGGGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCCACGCCAGGGAAAGTCTTCCTCACAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGATGCCACGTTCATCACTaGCCAGCACTGGGCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRCHVHH*PALGKT Trigger: GGTCTTGCCCAGTGCTGGCAAGTGATGAACGTGGCA...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS TCA 90 bp | TCCCCATTGCGTAAGCTCTGCACCACAGGCATATCCCCACCGCAGTaGGAAAGGTCTTTAGCTTTGCCGAGATTCGCTAATGATGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SPLRKLCTTGISPPQ*ERSLALPRFANDVT Trigger: GGTCACATCATTAGCGAATCTCGGCAAAGCTAAAGACCTTTCTCACTGCGGTGGGGATATGCCTGTGGTGCAGAGCTTACGCAATGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CCA 90 bp | TCTTGCTTCATCCCGAAGGCAATGCACCTCTGCAGCCTGCAGTACTaGCAGCGGTTTCGGTGGTGCTTATTGATAACGCAGTCTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCFIPKAMHLCSLQY*QRFRWCLLITQSLD Trigger: ATCCAAAGACTGCGTTATCAATAAGCACCACCGAAACCGCTGCCAGTACTGCAGGCTGCAGAGGTGCATTGCCTTCGGGATGAAGCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTGCCACGTTCATCACTaGCCAGCACTGGGCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LLQLLFADSLEATAPFGFCHVHH*PALGKT Trigger: GGTCTTGCCCAGTGCTGGCAAGTGATGAACGTGGCA...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS TCA 90 bp | TTCGCTAATGATGTGACCACACTGGCCAATGTGCTTAAGTCTCCCTaGCACGATTCAGCCTTATCTGGTGCCATTAGCATAGCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FANDVTTLANVLKSP*HDSALSGAISIAGS Trigger: AGAGCCAGCTATGCTAATGGCACCAGATAAGGCTGAATCGTGTCAGGGAGACTTAAGCACATTGGCCAGTGTGGTCACATCATTAGCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CCA 90 bp | TTGTCTCCACACACGACACAAAGATCAAAAACCTTATTTGGTCCCTaGTCAGGAGACTTTTCTGTTAAGAGCTGGAGGTGCGGTGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPHTTQRSKTLFGP*SGDFSVKSWRCGAD Trigger: GTCCGCACCGCACCTCCAGCTCTTAACAGAAAAGTCTCCTGACCAGGGACCAAATAAGGTTTTTGATCTTTGTGTCGTGTGTGGAGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CCA 90 bp | GATGAATATTCACAAACATTCCTGAATCCAACAGTCCAGCTGACCTaGCAGTCTCGCTGTCTGTTACAAAGGTTGGCGTTGCGGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DEYSQTFLNPTVQLT*QSRCLLQRLALRLE Trigger: CTCTAGCCGCAACGCCAACCTTTGTAACAGACAGCGAGACTGCCAGGTCAGCTGGACTGTTGGATTCAGGAATGTTTGTGAATATTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAACACTGAACAGAGTCTaGCTTCATCCCGAAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRTLNRV*LHPEGN Trigger: ATTGCCTTCGGGATGAAGCAAGACTCTGTTCAGTGT...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTCGGGAGTCAGTGCTTTaGCAAGAGTGTCAAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYSYYSQTPWKQQLHLVSRESVL*QECQMP Trigger: GGGCATTTGACACTCTTGCAAAAGCACTGACTCCCG...AGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTCGGGAGTCAGTGCTTTaGCAAGAGTGTCAAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSYYSQTPWKQQLHLVSCRESVL*QECQMP Trigger: GGGCATTTGACACTCTTGCAAAAGCACTGACTCCCG...ACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAAATCTCACCCATCTGTaGGTCGATAATTTGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRNLTHL*VDNLMC Trigger: GCACATCAAATTATCGACCAACAGATGGGTGAGATT...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATAGCCTTCACAAGTTATaGCTCCGTAATGACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FGYSYSYYSQTPWKQQLHSLHKL*LRNDAL Trigger: CAGGGCGTCATTACGGAGCAATAACTTGTGAAGGCT...ATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGTTGAAGCTGCACAGTaGGAAGATTTTTCTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQVEAAQ*EDFSRE Trigger: TTCCCGAGAAAAATCTTCCAACTGTGCAGCTTCAAC...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | ATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGAGAATTGCCAATGAGACCTTaGAAGAACAACTCCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IRRLPGSNSSIWFLVSRELPMRP*KNNSSV Trigger: TACTGAGGAGTTGTTCTTCAAAGGTCTCATTGGCAA...TTCTCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | CTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTCTGTCGATCCGTACGTaGCCAATGAGACCTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTVTIRRLPGSNSSIWFLLSIRT*PMRPLK Trigger: CTTCAAAGGTCTCATTGGCAACGTACGGATCGACAG...AAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGGATCAAAAACCTTATTaGGTCCCTGGTCAGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWDQKPY*VPGQET Trigger: AGTCTCCTGACCAGGGACCAAATAAGGTTTTTGATC...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTACACTGAACAGAGTCTaGCTTCATCCCGAAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSYYSQTPWKQQLHLVSCTLNRV*LHPEGN Trigger: ATTGCCTTCGGGATGAAGCAAGACTCTGTTCAGTGT...ACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGGGTGAAAGGTCTTTAGCTTaGCCGAGATTCGCTAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPRAAQYLFKSSLEDRQGERSLA*PRFAND Trigger: ATCATTAGCGAATCTCGGCAAAGCTAAAGACCTTTC...ACCCTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | ACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTCCCGACCTGGTGATATAATCTaGGAATTCCACATAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TIRRLPGSNSSIWFLVSRPGDII*EFHISL Trigger: AAGGCTTATGTGGAATTCCAAGATTATATCACCAGG...TCGGGACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATCCCTAGAGGACAGACAGTTGCCAATGAGACCTTaGAAGAACAACTCCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSPRAAQYLFKSSLEDRQLPMRP*KNNSSV Trigger: TACTGAGGAGTTGTTCTTCAAAGGTCTCATTGGCAA...CTGTCTGTCCTCTAGGGATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS TCA 90 bp | TCTGGTGCCATTAGCATAGCTGGCTCTGTTTTTATTCCAGACGGATaGATATTCACAAACATTCCTGAATCCAACAGTCCAGCTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGAISIAGSVFIPDG*IFTNIPESNSPADL Trigger: CAGGTCAGCTGGACTGTTGGATTCAGGAATGTTTGTGAATATTCATCCGTCTGGAATAAAAACAGAGCCAGCTATGCTAATGGCACCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CCA 90 bp | ACAAACGTTGCTAATATAGTTGCCACGTTCATCACTTGCCAGCACTaGGCAAGACCAAGGGTAAAAAGCTCATTCCAATACGCTTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: TNVANIVATFITCQH*ARPRVKSSFQYAFT Trigger: GGTAAAAGCGTATTGGAATGAGCTTTTTACCCTTGGTCTTGCCCAGTGCTGGCAAGTGATGAACGTGGCAACTATATTAGCAACGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATGTTGAAGCTGCACAGTaGGAAGATTTTTCTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FGYSYSYYSQTPWKQQLHVEAAQ*EDFSRE Trigger: TTCCCGAGAAAAATCTTCCAACTGTGCAGCTTCAAC...ATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTTGTGTGCTGTGACCAATTATTaGAGAGTTGTAATCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLFADSLEATAPFGFLCAVTNY*RVVICR Trigger: CCTGCAGATTACAACTCTCAAATAATTGGTCACAGC...ACACAAGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
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| CDS-3UTR CAA 90 bp | GTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGGCTGTGACCAATTATTaGAGAGTTGTAATCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTLTVTIRRLPGSNSSIWAVTNY*RVVICR Trigger: CCTGCAGATTACAACTCTCAAATAATTGGTCACAGC...CCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | GACAGTCTTAGGTGTCATCCTCACCAAGAGCAGCCCAGTACCTTTTTAAATCATAATCTCACCCATCTGTaGGTCGATAATTTGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSLRCHPHQEQPSTFLNHNLTHL*VDNLMC Trigger: GCACATCAAATTATCGACCAACAGATGGGTGAGATT...ATGATTTAAAAAGGTACTGGGCTGCTCTTGGTGAGGATGACACCTAAGACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | TCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCTGAAAGGTCTTTAGCTTaGCCGAGATTCGCTAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SYSYYSQTPWKQQLHLVSERSLA*PRFAND Trigger: ATCATTAGCGAATCTCGGCAAAGCTAAAGACCTTTC...AGAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACAGCTCCATTTGGTTTCCCTGGTGATATAATCTaGGAATTCCACATAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLQLLFADSLEATAPFGFPGDII*EFHISL Trigger: AAGGCTTATGTGGAATTCCAAGATTATATCACCAGG...GAAACCAAATGGAGCTGTTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTCAATTTTGGTTACTCTTACAGTTACTATTCGCAGACTCCCTGGAAGCAACTGTCGATCCGTACGTaGCCAATGAGACCTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TFNFGYSYSYYSQTPWKQLSIRT*PMRPLK Trigger: CTTCAAAGGTCTCATTGGCAACGTACGGATCGACAG...TTGCTTCCAGGGAGTCTGCGAATAGTAACTGTAAGAGTAACCAAAATTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092213.11 ENSMUST00000105290.9 |
||
| CDS-3UTR CAA 90 bp | CACTATGAAAGAAAATACAAATGGCTTGTGTCTCATTGCCAGCAACGAGAGTGTGATCAAAAACCTTATTaGGTCCCTGGTCAGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HYERKYKWLVSHCQQRECDQKPY*VPGQET Trigger: AGTCTCCTGACCAGGGACCAAATAAGGTTTTTGATC...ACACTCTCGTTGCTGGCAATGAGACACAAGCCATTTGTATTTTCTTTCATAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105290.9 |
||
| CDS GCA 72 bp | GGCATAGGAGAAGGCATGGTGAGCCTGAAAGCTACGTaGGACTCGCTCAGCAGCGGCCCCTCCTTCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GIGEGMVSLKAT*DSLSSGPSFST Trigger: CGTGGAGAAGGAGGGGCCGCTGCTGAGCGAGTCGCACGTAGCTTTCAGGCTCACCATGCCTTCTCCTATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CAA 72 bp | ACTCGCTCAGCAGCGGCCCCTCCTTCTCCACGAAGCTaGGCTCTCCAGCGATTAGATGCGGGCTTCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TRSAAAPPSPRS*ALQRLDAGFPP Trigger: TGGAGGGAAGCCCGCATCTAATCGCTGGAGAGCCAAGCTTCGTGGAGAAGGAGGGGCCGCTGCTGAGCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS GCA 72 bp | TCCTTCTCCACGAAGCTTGGCTCTCCAGCGATTAGATaGGGGCTTCCCTCCATGCCCTCTTCTGGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSTKLGSPAIR*GLPSMPSSGLW Trigger: CCAGAGCCCAGAAGAGGGCATGGAGGGAAGCCCGCATCTAATCGCTGGAGAGCCAAGCTTCGTGGAGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS GCA 72 bp | CCTGGCGTGGATCCCTCGTGGTTTGCCAGAATGAACTaGTTGCCCTGTGTGCTGTGGTCAAGTGCTGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: PGVDPSWFARMN*LPCVLWSSAVT Trigger: CGTGACAGCACTTGACCACAGCACACAGGGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCCACGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CAA 90 bp | CCAACAGTCCAGCTGACCTGGCAGTCTCGCTGTCTGTTACAAAGGTaGGCGTTGCGGCTAGAGGGCTTCGGAGGTCTTTGCGGATGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTVQLTWQSRCLLQR*ALRLEGFGGLCGCR Trigger: TCTACATCCGCAAAGACCTCCGAAGCCCTCTAGCCGCAACGCCAACCTTTGTAACAGACAGCGAGACTGCCAGGTCAGCTGGACTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS GCA 72 bp | GAGGAAGACTTTCCCTGGCGTGGATCCCTCGTGGTTTaGCAGAATGAACTGCTTGCCCTGTGTGCTGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EEDFPWRGSLVV*QNELLALCAVV Trigger: GACCACAGCACACAGGGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCCACGCCAGGGAAAGTCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CAA 72 bp | ACCTGGCAGTCTCGCTGTCTGTTACAAAGGTTGGCGTaGCGGCTAGAGGGCTTCGGAGGTCTTTGCGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: TWQSRCLLQRLA*RLEGFGGLCGC Trigger: ACATCCGCAAAGACCTCCGAAGCCCTCTAGCCGCAACGCCAACCTTTGTAACAGACAGCGAGACTGCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS GCA 72 bp | CCTAGCGCCTGGAAAGAAGGTATGGAAAGTGCCCAGTaGATCGATAAGAACAGCAGTCTGGAGGCCGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSAWKEGMESAQ*IDKNSSLEADS Trigger: GGAGTCGGCCTCCAGACTGCTGTTCTTATCGATGCACTGGGCACTTTCCATACCTTCTTTCCAGGCGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CCA 72 bp | GTTGTGAGGAAGACTTTCCCTGGCGTGGATCCCTCGTaGTTTGCCAGAATGAACTGCTTGCCCTGTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVRKTFPGVDPS*FARMNCLPCVL Trigger: CAGCACACAGGGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCCACGCCAGGGAAAGTCTTCCTCACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CCA 72 bp | ATCCCGAAGGCAATGCACCTCTGCAGCCTGCAGTACTaGCAGCGGTTTCGGTGGTGCTTATTGATAACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IPKAMHLCSLQY*QRFRWCLLITQ Trigger: CTGCGTTATCAATAAGCACCACCGAAACCGCTGCCAGTACTGCAGGCTGCAGAGGTGCATTGCCTTCGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
||
| CDS CAA 90 bp | CTTCTGGGCTCTGGCAGGCGGAGCTTTCGCCGGGAGTCAGTGCTTTaGCAAGAGTGTCAAATGCCCTTGAAACATCCCCATTGGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLGSGRRSFRRESVL*QECQMPLKHPHWSE Trigger: TTCAGACCAATGGGGATGTTTCAAGGGCATTTGACACTCTTGCAAAAGCACTGACTCCCGGCGAAAGCTCCGCCTGCCAGAGCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 90 bp | ACTTTCCCTGGCGTGGATCCCTCGTGGTTTGCCAGAATGAACTGCTaGCCCTGTGTGCTGTGGTCAAGTGCTGTCACGATCTGGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: TFPGVDPSWFARMNC*PCVLWSSAVTIWIF Trigger: GAAAATCCAGATCGTGACAGCACTTGACCACAGCACACAGGGCAAGCAGTTCATTCTGGCAAACCACGAGGGATCCACGCCAGGGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CCA 72 bp | TGCTGTTCTCCTGCCCTAGCGCCTGGAAAGAAGGTATaGAAAGTGCCCAGTGCATCGATAAGAACAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CCSPALAPGKKV*KVPSASIRTAV Trigger: GACTGCTGTTCTTATCGATGCACTGGGCACTTTCCATACCTTCTTTCCAGGCGCTAGGGCAGGAGAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS TCA 72 bp | CGTAAGCTCTGCACCACAGGCATATCCCCACCGCAGTaGGAAAGGTCTTTAGCTTTGCCGAGATTCGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: RKLCTTGISPPQ*ERSLALPRFAN Trigger: ATTAGCGAATCTCGGCAAAGCTAAAGACCTTTCTCACTGCGGTGGGGATATGCCTGTGGTGCAGAGCTTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CCA 72 bp | TTTGGTCCCTGGTCAGGAGACTTTTCTGTTAAGAGCTaGAGGTGCGGTGCGGACAGATCAGGACTGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: FGPWSGDFSVKS*RCGADRSGLVK Trigger: TTTTACCAGTCCTGATCTGTCCGCACCGCACCTCCAGCTCTTAACAGAAAAGTCTCCTGACCAGGGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CCA 72 bp | TCACAAACATTCCTGAATCCAACAGTCCAGCTGACCTaGCAGTCTCGCTGTCTGTTACAAAGGTTGGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: SQTFLNPTVQLT*QSRCLLQRLAL Trigger: CAACGCCAACCTTTGTAACAGACAGCGAGACTGCCAGGTCAGCTGGACTGTTGGATTCAGGAATGTTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 90 bp | TTCTCGGGAAACTTCAATGGGTTTTCTTTCACACTGAACAGAGTCTaGCTTCATCCCGAAGGCAATGCACCTCTGCAGCCTGCAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: FSGNFNGFSFTLNRV*LHPEGNAPLQPAVL Trigger: CAGTACTGCAGGCTGCAGAGGTGCATTGCCTTCGGGATGAAGCAAGACTCTGTTCAGTGTGAAAGAAAACCCATTGAAGTTTCCCGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS TCA 72 bp | GATGTGACCACACTGGCCAATGTGCTTAAGTCTCCCTaGCACGATTCAGCCTTATCTGGTGCCATTAGCATA | + |
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Preference number: 6 (lower is better) Translates to: DVTTLANVLKSP*HDSALSGAISI Trigger: TATGCTAATGGCACCAGATAAGGCTGAATCGTGTCAGGGAGACTTAAGCACATTGGCCAGTGTGGTCACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 90 bp | CTGATGCTTTGTCTCCACACACGACACAAAGATCAAAAACCTTATTaGGTCCCTGGTCAGGAGACTTTTCTGTTAAGAGCTGGAGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: LMLCLHTRHKDQKPY*VPGQETFLLRAGGA Trigger: CGCACCTCCAGCTCTTAACAGAAAAGTCTCCTGACCAGGGACCAAATAAGGTTTTTGATCTTTGTGTCGTGTGTGGAGACAAAGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 72 bp | CATCAACGACTTCCTCCTTTCCGGGGACATTTTATCTaGCTGAAGGCTACTGTGAAGACAGTTGACAAACGT | + |
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Preference number: 6 (lower is better) Translates to: HQRLPPFRGHFI*LKATVKTVDKR Trigger: ACGTTTGTCAACTGTCTTCACAGTAGCCTTCAGCAAGATAAAATGTCCCCGGAAAGGAGGAAGTCGTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS TCA 72 bp | TTTTCTCGGGAAACTTCAATGGGTTTTCTTTCACACTaGACAGAGTCTTGCTTCATCCCGAAGGCAATGCAC | + |
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Preference number: 6 (lower is better) Translates to: FSRETSMGFLSH*TESCFIPKAMH Trigger: GTGCATTGCCTTCGGGATGAAGCAAGACTCTGTTCAGTGTGAAAGAAAACCCATTGAAGTTTCCCGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS TCA 72 bp | GCGACAGCCTGTAGGTGTCATCTGGATATGTCCTGGTaGTATAATCTTGGAATTCCACATAAGCCTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ATACRCHLDMSW*YNLGIPHKPFP Trigger: AGGAAAAGGCTTATGTGGAATTCCAAGATTATATCACCAGGACATATCCAGATGACACCTACAGGCTGTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 72 bp | CGGGAGTCAGTGCTTTTGCAAGAGTGTCAAATGCCCTaGAAACATCCCCATTGGTCTGAATATCATGATGAA | + |
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Preference number: 6 (lower is better) Translates to: RESVLLQECQMP*KHPHWSEYHDE Trigger: TTCATCATGATATTCAGACCAATGGGGATGTTTCAAGGGCATTTGACACTCTTGCAAAAGCACTGACTCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 72 bp | ATAACACTGTCGATCCGTACGTTGCCAATGAGACCTTaGAAGAACAACTCCTCAGTAATGGTAGCGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: ITLSIRTLPMRP*KNNSSVMVAFI Trigger: GATGAACGCTACCATTACTGAGGAGTTGTTCTTCAAAGGTCTCATTGGCAACGTACGGATCGACAGTGTTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS TCA 72 bp | GGGAGTCAGTGCTTTTGCAAGAGTGTCAAATGCCCTTaGAACATCCCCATTGGTCTGAATATCATGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: GSQCFCKSVKCP*NIPIGLNIMMK Trigger: TTTCATCATGATATTCAGACCAATGGGGATGTTTCAAGGGCATTTGACACTCTTGCAAAAGCACTGACTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CCA 72 bp | TTGCAAGAGTGTCAAATGCCCTTGAAACATCCCCATTaGTCTGAATATCATGATGAAAAGCACCGAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LQECQMPLKHPH*SEYHDEKHRRM Trigger: CATCCTTCGGTGCTTTTCATCATGATATTCAGACCAATGGGGATGTTTCAAGGGCATTTGACACTCTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 72 bp | TGTCTCCACACACGACACAAAGATCAAAAACCTTATTaGGTCCCTGGTCAGGAGACTTTTCTGTTAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: CLHTRHKDQKPY*VPGQETFLLRA Trigger: AGCTCTTAACAGAAAAGTCTCCTGACCAGGGACCAAATAAGGTTTTTGATCTTTGTGTCGTGTGTGGAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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| CDS CAA 72 bp | TTTAAAATGTGTGGGATAACACTGTCGATCCGTACGTaGCCAATGAGACCTTTGAAGAACAACTCCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: FKMCGITLSIRT*PMRPLKNNSSV Trigger: TACTGAGGAGTTGTTCTTCAAAGGTCTCATTGGCAACGTACGGATCGACAGTGTTATCCCACACATTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092213.11 ENSMUST00000099343.2 ENSMUST00000105290.9 |
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