Pregenerated sensors for NR1I3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005677Ensembl transcript IDs: ENSMUST00000005820.11, ENSMUST00000075469.12, ENSMUST00000111328.8, ENSMUST00000133075.8, ENSMUST00000155126.8
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTaGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SISLPLPSSFLLVPV*GPALYPFQASVSLG Trigger: CCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
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| 3UTR CCA 90 bp | GAGGCTTCCATCTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTaGCCCTGTGGTTGCCCACCTCCCTTCTCTCTGTCCCCCACCCAC | + |
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Preference number: 1 (lower is better) Translates to: EASIFPIPCVSGEQL*PCGCPPPFSLSPTH Trigger: GTGGGTGGGGGACAGAGAGAAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGATGGAAGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CCA 90 bp | ATCTCTTCTCTTTGGGTAACTCCGGGTCTGTCTGAGAGAGGAGACTaGGAAGGGCAAGGTGGCAGGGGCCACAGATGGGGGCCTCACATT | + |
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Preference number: 1 (lower is better) Translates to: ISSLWVTPGLSERGD*EGQGGRGHRWGPHI Trigger: AATGTGAGGCCCCCATCTGTGGCCCCTGCCACCTTGCCCTTCCCAGTCTCCTCTCTCAGACAGACCCGGAGTTACCCAAAGAGAAGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR CCA 90 bp | AGTGACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTaGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: SDCSAFHCHSQAPSC*FPCGVQRCTLSRPV Trigger: CACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR GCA 90 bp | GACTCCCTGACTCTTGCATCCTCTCTCCCTGACAGTGATCATGGTTaGTCACTTCCTGCAGAGCATCACCCATCGGCTTGTGCTAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: DSLTLASSLPDSDHG*SLPAEHHPSACARR Trigger: CCTCCTAGCACAAGCCGATGGGTGATGCTCTGCAGGAAGTGAGCAACCATGATCACTGTCAGGGAGAGAGGATGCAAGAGTCAGGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR GCA 90 bp | CCACTGATGAGTGCACTAAGAGACAGTGACTGTTCAGCATTTCATTaGCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PLMSALRDSDCSAFH*HSQAPSCWFPCGVQ Trigger: CTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGTCACTGTCTCTTAGTGCACTCATCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CCA 90 bp | GAGATATGCAATATTTCCACAGCCGCTCCCTTGAGAAGGGAGATCTaGTCCTCCATGGTTAGGGACCGGAAGAGCGGCAGATCCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: EICNISTAAPLRREI*SSMVRDRKSGRSLV Trigger: CACCAAGGATCTGCCGCTCTTCCGGTCCCTAACCATGGAGGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGAAATATTGCATATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 90 bp | AAGAGGGCCGTGGCAGCCATGAGCACATACTCAGGCTCCTGGAGATaGAGTCCTTTCAGGTTTTTATGGAAGTGGAGGATCGACTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: KRAVAAMSTYSGSWR*SPFRFLWKWRIDSK Trigger: TTTGGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGTGCTCATGGCTGCCACGGCCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 90 bp | CTTGGTGAACTTGATGATCTGTTGCACCATAAACGTGTTGATATCTaGAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGAGGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LGELDDLLHHKRVDI*KVCEQRQHGAPRLE Trigger: TTCCAGCCTCGGGGCCCCGTGTTGCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAGTTCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 90 bp | GTGGAGGATCGACTCCAAAAACTCGTACTGGAACCCTGCATGGACTaGGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTC | + |
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Preference number: 1 (lower is better) Translates to: VEDRLQKLVLEPCMD*VLHLVAKRPTEEIL Trigger: GAGAATTTCTTCTGTGGGCCTCTTTGCTACAAGATGGAGGACGCAGTCCATGCAGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 90 bp | CGTCATAGCAGACAGTTCCTCCAAGCGCTGAAGTTCATAGGAGTATaGATTGTTTATACTCCGGAGGTCAGCCAGCAGGCCCATCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: RHSRQFLQALKFIGV*IVYTPEVSQQAHQL Trigger: AAGCTGATGGGCCTGCTGGCTGACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGCGCTTGGAGGAACTGTCTGCTATGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 90 bp | ATCTGGTCTACATTTTCACACATGCATTCCAGCTTGCTTATACCCTaGCAGAACTCCTGTGGGATTCATGGCGACGGGTCCTCCTCTCGT | + |
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Preference number: 1 (lower is better) Translates to: IWSTFSHMHSSLLIP*QNSCGIHGDGSSSR Trigger: ACGAGAGGAGGACCCGTCGCCATGAATCCCACAGGAGTTCTGGCAGGGTATAAGCAAGCTGGAATGCATGTGTGAAAATGTAGACCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CCA 90 bp | TTCCACTCCTTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTaGCCACAGAAAGACCAAAGAATGGGCCCACCCATTCCCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: FHSFPREGRIKELNL*PQKDQRMGPPIPRR Trigger: CCTTCTGGGAATGGGTGGGCCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAAGGAGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CCA 90 bp | GGAGGGAGGCTCTACCTTACTTCTGTTGACTCCATACTCCAAGTCTaGCTAATCAACCGGGTCAATATACTTTTCCCCGGCAGGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GGRLYLTSVDSILQV*LINRVNILFPGRLG Trigger: ACCAAGCCTGCCGGGGAAAAGTATATTGACCCGGTTGATTAGCCAGACTTGGAGTATGGAGTCAACAGAAGTAAGGTAGAGCCTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR TCA 90 bp | GGGATTTGGGGACATGCAGGGAGGGAGGCTCTACCTTACTTCTGTTaGCTCCATACTCCAAGTCTGGCTAATCAACCGGGTCAATATACT | + |
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Preference number: 1 (lower is better) Translates to: GIWGHAGREALPYFC*LHTPSLANQPGQYT Trigger: AGTATATTGACCCGGTTGATTAGCCAGACTTGGAGTATGGAGTCAACAGAAGTAAGGTAGAGCCTCCCTCCCTGCATGTCCCCAAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR GCA 90 bp | AGGGACCGGAAGAGCGGCAGATCCTTGGTGAACTTGATGATCTGTTaGACCATAAACGTGTTGATATCTGCAAAGTGTGTGAGCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: RDRKSGRSLVNLMIC*TINVLISAKCVSRG Trigger: GCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAGTTCACCAAGGATCTGCCGCTCTTCCGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 90 bp | TTTATGGAAGTGGAGGATCGACTCCAAAAACTCGTACTGGAACCCTaGATGGACTGCGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: FMEVEDRLQKLVLEP*MDCVLHLVAKRPTE Trigger: TTCTGTGGGCCTCTTTGCTACAAGATGGAGGACGCAGTCCATGCAGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTCCATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR CCA 90 bp | AGGTCAGCCAGCAGGCCCATCAGCTTTGCATACAGAAACCGACTTTaGAGCCGAGACTGTTGTTCCATAATGTGGTTGTTCAGAATCAGC | + |
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Preference number: 1 (lower is better) Translates to: RSASRPISFAYRNRL*SRDCCSIMWLFRIS Trigger: GCTGATTCTGAACAACCACATTATGGAACAACAGTCTCGGCTCCAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGCTGGCTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR TCA 90 bp | CAAATACAAGGCTACAAGATACGACCTTCTCCTTTGGTTACCACCTaGCTCTGCCCCAGGCCGATATGGTGTTTAGAGGTGAGGGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: QIQGYKIRPSPLVTT*LCPRPIWCLEVRVL Trigger: CAAAACCCTCACCTCTAAACACCATATCGGCCTGGGGCAGAGTCAGGTGGTAACCAAAGGAGAAGGTCGTATCTTGTAGCCTTGTATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CCA 90 bp | TACTCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAACTCGTACTGGAACCCTGCATGGACT | + |
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Preference number: 1 (lower is better) Translates to: YSGSWRCSPFRFLWK*RIDSKNSYWNPAWT Trigger: AGTCCATGCAGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR CCA 90 bp | AGCACATACTCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATaGAAGTGGAGGATCGACTCCAAAAACTCGTACTGGAACCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: STYSGSWRCSPFRFL*KWRIDSKNSYWNPA Trigger: TGCAGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR CCA 90 bp | CGAGTCTTCCCAGGCTTCTGGCCTATGATTCTTTCTGGCCTCATCTaGTCTACATTTTCACACATGCATTCCAGCTTGCTTATACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RVFPGFWPMILSGLI*STFSHMHSSLLIPC Trigger: GCAGGGTATAAGCAAGCTGGAATGCATGTGTGAAAATGTAGACCAGATGAGGCCAGAAAGAATCATAGGCCAGAAGCCTGGGAAGACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR TCA 90 bp | TCCATAATGTGGTTGTTCAGAATCAGCGCCATCTCCTCTTGTAGCTaGTCTATCTCTTCTCTTTGGGTAACTCCGGGTCTGTCTGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: SIMWLFRISAISSCS*SISSLWVTPGLSER Trigger: TCTCTCAGACAGACCCGGAGTTACCCAAAGAGAAGAGATAGATCAGCTACAAGAGGAGATGGCGCTGATTCTGAACAACCACATTATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR TCA 90 bp | TCTCGTTCTTGTCCCTGCTTCTCAGGTTCAGGTTGGAGTAGAGTTTaGGGCAAATACAAGGCTACAAGATACGACCTTCTCCTTTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: SRSCPCFSGSGWSRV*GKYKATRYDLLLWL Trigger: TAACCAAAGGAGAAGGTCGTATCTTGTAGCCTTGTATTTGCCTCAAACTCTACTCCAACCTGAACCTGAGAAGCAGGGACAAGAACGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR TCA 90 bp | CCCACAGAAGAAATTCTCTGTTTGAAGACAGAACGTAGTGTTGAGTaGGATATGCAATATTTCCACAGCCGCTCCCTTGAGAAGGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: PTEEILCLKTERSVE*DMQYFHSRSLEKGD Trigger: ATCTCCCTTCTCAAGGGAGCGGCTGTGGAAATATTGCATATCTCACTCAACACTACGTTCTGTCTTCAAACAGAGAATTTCTTCTGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCGTATCCCTGGGGGTCTaGGGAAAGGATGCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KLLPAGSRVGSSAVPFPGVSLGV*GKDASL Trigger: CAGGCTTGCATCCTTTCCCCAGACCCCCAGGGATAC...GCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGGTATCCCTGGGGGTCTaGGGAAAGGATGCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLPLPSSFLLVPVWGPALVSLGV*GKDASL Trigger: CAGGCTTGCATCCTTTCCCCAGACCCCCAGGGATAC...CAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGCGTCACAAGCTCCTTCCTGCTaGTTCCCGTGTGGGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GKDASLGLNCKSPRAAASQAPSC*FPCGVQ Trigger: CTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTG...TGACGCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075469.12 ENSMUST00000133075.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCTAGGGCCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTGCCGGATGGTATCCCTGGGGGTCTaGGGAAAGGATGCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLGPETNLVPLQSLPCRMVSLGV*GKDASL Trigger: CAGGCTTGCATCCTTTCCCCAGACCCCCAGGGATAC...CATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCAGGCCAGTGTATCCCTaGGGGTCTGGGGAAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: HFIATPKLLPAGSRVGSSRPVYP*GSGERM Trigger: CATCCTTTCCCCAGACCCCCAGGGATACACTGGCCT...GCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGTATCCCTGGGGGTCTaGGGAAAGGATGCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SISLPLPSSFLLVPVWGPVSLGV*GKDASL Trigger: CAGGCTTGCATCCTTTCCCCAGACCCCCAGGGATAC...TGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
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| 3UTR CAA 90 bp | GCAGCTGGAACCTTTGAGTCTGATACCCTAGGGCCAGAGACTAACTaGGTCCCTCTCCAGAGCCTACCTTGCCGGATGACTCCTAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: AAGTFESDTLGPETN*VPLQSLPCRMTPRS Trigger: GGACCTAGGAGTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCAAAGGTTCCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CAA 90 bp | CCTAGCCCTTGGAGCCTTCCTCAATCACTGGCGAAACAGATTCCATaGCGGCTTCAGCATCACTGTGGGCTGAGGTTGTCCTGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PSPWSLPQSLAKQIP*RLQHHCGLRLSWEQ Trigger: CTGCTCCCAGGACAACCTCAGCCCACAGTGATGCTGAAGCCGCAATGGAATCTGTTTCGCCAGTGATTGAGGAAGGCTCCAAGGGCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR CAA 90 bp | CCCTCTGTTCTCCCCCACCCTGCAGCTGTCCACTGGGTAGCTACGTaGAATGTTGGGTCAGGTGGGGCCCATGCAAGTTATTACCACAAG | + |
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Preference number: 2 (lower is better) Translates to: PSVLPHPAAVHWVAT*NVGSGGAHASYYHK Trigger: CTTGTGGTAATAACTTGCATGGGCCCCACCTGACCCAACATTCAACGTAGCTACCCAGTGGACAGCTGCAGGGTGGGGGAGAACAGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGGTTTTGAGACACTTAGAAGTGGTGAGGGATTTGGGGACATGCAGGGAGCTTTGGCCCTGTGGTTaGCCACCTCCCTTCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VRVLRHLEVVRDLGTCRELWPCG*PPPFSL Trigger: CAGAGAGAAGGGAGGTGGGCAACCACAGGGCCAAAG...CTCCCTGCATGTCCCCAAATCCCTCACCACTTCTAAGTGTCTCAAAACCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR-3UTR GCA 90 bp | GTACGAGATCAAGTGAATGATGGTGAGGAGGAGAGACTCGGGGCTTTTCTGGGGGGTGTGTTGGTGCGGTaGTGGAGAAGAAGATGCGTC | + |
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Preference number: 2 (lower is better) Translates to: VRDQVNDGEEERLGAFLGGVLVR*WRRRCV Trigger: GACGCATCTTCTTCTCCAGCACCGCACCAACACACC...CCCCAGAAAAGCCCCGAGTCTCTCCTCCTCACCATCATTCACTTGATCTCGTAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCACTGGGTAGCTACGTTGAATGTTGGGTCAGGTGGGGCCCATGCAAGTTATCAGGCTTCTGGCCTATaGTTCTTTCTGGCCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: VHWVATLNVGSGGAHASYQASGL*FFLASS Trigger: AGATGAGGCCAGAAAGAATCATAGGCCAGAAGCCTG...ATAACTTGCATGGGCCCCACCTGACCCAACATTCAACGTAGCTACCCAGTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCAGGCCCATCAGCTTTGCATACAGAAACCGACTTTGGAGCCGAGACTGTTGTTCAGCATTTCATTaGCACTCCCAAGCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ASRPISFAYRNRLWSRDCCSAFH*HSQAPS Trigger: GGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACA...ACAGTCTCGGCTCCAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR CAA 90 bp | GGCAGATCCTTGGTGAACTTGATGATCTGTTGCACCATAAACGTGTaGATATCTGCAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: GRSLVNLMICCTINV*ISAKCVSRGNTGPR Trigger: TCGGGGCCCCGTGTTGCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAGTTCACCAAGGATCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCAAGTTATTACCACAAGGCCAATGAACAGGTAAGACTACCAAGCTCATCTCAAGCTCCTTCCTGCTaGTTCCCGTGTGGGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HASYYHKANEQVRLPSSSQAPSC*FPCGVQ Trigger: CTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTG...AGATGAGCTTGGTAGTCTTACCTGTTCATTGGCCTTGTGGTAATAACTTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCAGACAGTTCCTCCAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATAGAGTTCCTCAGCTTTaGGATGATCCTCACCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HSRQFLQALKFIGVCIVYRVPQL*DDPHQG Trigger: CCCCTGGTGAGGATCATCCCAAAGCTGAGGAACTCT...ATAAACAATGCATACTCCTATGAACTTCAGCGCTTGGAGGAACTGTCTGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCAGACAGTTCCTCCAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: HSRQFLQALKFIGVCIVYRFLWK*RIDSKN Trigger: GTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCT...ATAAACAATGCATACTCCTATGAACTTCAGCGCTTGGAGGAACTGTCTGCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR TCA 72 bp | AGAGGTGGAAGGGGCCAGAGTTCCTCAGCTTTGGGATaGTCCTCACCAGGGGAGAAGAGGGCCGTGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RGGRGQSSSALG*SSPGEKRAVAA Trigger: GGCTGCCACGGCCCTCTTCTCCCCTGGTGAGGATCATCCCAAAGCTGAGGAACTCTGGCCCCTTCCACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR CCA 72 bp | TTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTaGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LPLPSSFLLVPV*GPALYPFQASV Trigger: TACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
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| 3UTR CCA 72 bp | TGGGTAGAGGTGGAAGGGGCCAGAGTTCCTCAGCTTTaGGATGATCCTCACCAGGGGAGAAGAGGGCCGTGG | + |
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Preference number: 3 (lower is better) Translates to: WVEVEGARVPQL*DDPHQGRRGPW Trigger: CCACGGCCCTCTTCTCCCCTGGTGAGGATCATCCCAAAGCTGAGGAACTCTGGCCCCTTCCACCTCTACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
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| 3UTR GCA 72 bp | CCAGAGACTAACTTGGTCCCTCTCCAGAGCCTACCTTaGCGGATGACTCCTAGGTCCCATGGGCAGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PETNLVPLQSLP*RMTPRSHGQSG Trigger: CCCACTCTGCCCATGGGACCTAGGAGTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCACTGTTCAGCATTTCATaGCCACTCCCAAGCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKLLPAGSRVGSSAVPFPLFSIS*PLPSSF Trigger: GAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAG...TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAACCAGAACCTTCTGCCCCTCGAGTCTTCCCAGGCTTCTGGCCTATGATTCTCACTGTGGGCTGAGGTaGTCCTGGGAGCAGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: STRTFCPSSLPRLLAYDSHCGLR*SWEQPL Trigger: CAGAGGCTGCTCCCAGGACAACCTCAGCCCACAGTG...AGAATCATAGGCCAGAAGCCTGGGAAGACTCGAGGGGCAGAAGGTTCTGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR TCA 72 bp | AACAGATTCCATTGCGGCTTCAGCATCACTGTGGGCTaGGGTTGTCCTGGGAGCAGCCTCTGCAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NRFHCGFSITVG*GCPGSSLCSSW Trigger: CCAGCTGCTGCAGAGGCTGCTCCCAGGACAACCTCAGCCCACAGTGATGCTGAAGCCGCAATGGAATCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | TCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTaGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SAFHCHSQAPSC*FPCGVQRCTLS Trigger: GGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | CTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTaGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LYPFQASVSLGV*GKDASLGLNCK Trigger: TTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075469.12 ENSMUST00000133075.8 |
||
| 3UTR GCA 72 bp | TGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTaGTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSAFHCHSQAPS*WFPCGVQRCTL Trigger: AAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | AATATTTCCACAGCCGCTCCCTTGAGAAGGGAGATCTaGTCCTCCATGGTTAGGGACCGGAAGAGCGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NISTAAPLRREI*SSMVRDRKSGR Trigger: TCTGCCGCTCTTCCGGTCCCTAACCATGGAGGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGAAATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR CCA 72 bp | ATCTTTCCCATCCCCTGTGTTTCCGGAGAACAACTTTaGCCCTGTGGTTGCCCACCTCCCTTCTCTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: IFPIPCVSGEQL*PCGCPPPFSLS Trigger: GGACAGAGAGAAGGGAGGTGGGCAACCACAGGGCCAAAGTTGTTCTCCGGAAACACAGGGGATGGGAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | CTTGCTTATACCCTGCCAGAACTCCTGTGGGATTCATaGCGACGGGTCCTCCTCTCGTTCTTGTCCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LAYTLPELLWDS*RRVLLSFLSLL Trigger: AAGCAGGGACAAGAACGAGAGGAGGACCCGTCGCCATGAATCCCACAGGAGTTCTGGCAGGGTATAAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATGGAAGTGGAGGATCGACTCCACAGCCGCTCCCTaGAGAAGGGAGATCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGSWRCSPFRFLWKWRIDSTAAP*RREIWS Trigger: GGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGA...GTCGATCCTCCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACGAGATCAAGTGAATGATGGTGAGGAGGAGAGACTCGGGGCTTTTCTGGGGCACTGGGTAGCTACGTaGAATGTTGGGTCAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VRDQVNDGEEERLGAFLGHWVAT*NVGSGG Trigger: CCCACCTGACCCAACATTCAACGTAGCTACCCAGTG...CCCCAGAAAAGCCCCGAGTCTCTCCTCCTCACCATCATTCACTTGATCTCGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | AGGGCCGTGGCAGCCATGAGCACATACTCAGGCTCCTaGAGATGCAGTCCTTTCAGGTTTTTATGGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAVAAMSTYSGS*RCSPFRFLWKW Trigger: CCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGTGCTCATGGCTGCCACGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR CCA 72 bp | CCTGTCACCCTAGCCCTTGGAGCCTTCCTCAATCACTaGCGAAACAGATTCCATTGCGGCTTCAGCATCACT | + |
|
Preference number: 3 (lower is better) Translates to: PVTLALGAFLNH*RNRFHCGFSIT Trigger: AGTGATGCTGAAGCCGCAATGGAATCTGTTTCGCCAGTGATTGAGGAAGGCTCCAAGGGCTAGGGTGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | AATCAACCGGGTCAATATACTTTTCCCCGGCAGGCTTaGTGGACAGTAACTGGTGTGTTGGTGCGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NQPGQYTFPRQA*WTVTGVLVRCW Trigger: CCAGCACCGCACCAACACACCAGTTACTGTCCACCAAGCCTGCCGGGGAAAAGTATATTGACCCGGTTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | CCCTGCAGCTGTCCACTGGGTAGCTACGTTGAATGTTaGGTCAGGTGGGGCCCATGCAAGTTATTACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PCSCPLGSYVEC*VRWGPCKLLPQ Trigger: TTGTGGTAATAACTTGCATGGGCCCCACCTGACCCAACATTCAACGTAGCTACCCAGTGGACAGCTGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR TCA 72 bp | GGACATGCAGGGAGGGAGGCTCTACCTTACTTCTGTTaGCTCCATACTCCAAGTCTGGCTAATCAACCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GHAGREALPYFC*LHTPSLANQPG Trigger: ACCCGGTTGATTAGCCAGACTTGGAGTATGGAGTCAACAGAAGTAAGGTAGAGCCTCCCTCCCTGCATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR TCA 72 bp | GGCTACAAGATACGACCTTCTCCTTTGGTTACCACCTaGCTCTGCCCCAGGCCGATATGGTGTTTAGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GYKIRPSPLVTT*LCPRPIWCLEV Trigger: CACCTCTAAACACCATATCGGCCTGGGGCAGAGTCAGGTGGTAACCAAAGGAGAAGGTCGTATCTTGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR TCA 72 bp | GACTCTGGCTGGGAAGTACTCAGGTACGAGATCAAGTaGATGATGGTGAGGAGGAGAGACTCGGGGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: DSGWEVLRYEIK*MMVRRRDSGLF Trigger: GAAAAGCCCCGAGTCTCTCCTCCTCACCATCATTCACTTGATCTCGTACCTGAGTACTTCCCAGCCAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | TCTCTTAGCCTAGTGAGTCAGTCAACCAGAACCTTCTaGCCCTCGAGTCTTCCCAGGCTTCTGGCCTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLVSQSTRTF*PSSLPRLLAYD Trigger: ATCATAGGCCAGAAGCCTGGGAAGACTCGAGGGGCAGAAGGTTCTGGTTGACTGACTCACTAGGCTAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | ACTCTTGCATCCTCTCTCCCTGACAGTGATCATGGTTaGTCACTTCCTGCAGAGCATCACCCATCGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLASSLPDSDHG*SLPAEHHPSAC Trigger: ACAAGCCGATGGGTGATGCTCTGCAGGAAGTGAGCAACCATGATCACTGTCAGGGAGAGAGGATGCAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGGGTTCCTTTGCCTGTATCTACGATGGTAACTGCCTTTTCCCTCTGTTCTTTTCCCCGGCAGGCTaGGTGGACAGTAACTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FWGSFACIYDGNCLFPLFFSPAG*VDSNWC Trigger: ACACCAGTTACTGTCCACCAAGCCTGCCGGGGAAAA...GAACAGAGGGAAAAGGCAGTTACCATCGTAGATACAGGCAAAGGAACCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR TCA 72 bp | CTTCTGCCCCTCGAGTCTTCCCAGGCTTCTGGCCTATaGTTCTTTCTGGCCTCATCTGGTCTACATTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPLESSQASGL*FFLASSGLHFH Trigger: GTGAAAATGTAGACCAGATGAGGCCAGAAAGAATCATAGGCCAGAAGCCTGGGAAGACTCGAGGGGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | AGACAGTTCCTCCAAGCGCTGAAGTTCATAGGAGTATaGATTGTTTATACTCCGGAGGTCAGCCAGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RQFLQALKFIGV*IVYTPEVSQQA Trigger: GGCCTGCTGGCTGACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGCGCTTGGAGGAACTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075469.12 ENSMUST00000133075.8 |
||
| 3UTR GCA 72 bp | CTTGATGATCTGTTGCACCATAAACGTGTTGATATCTaGAAAGTGTGTGAGCAGAGGCAACACGGGGCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LDDLLHHKRVDI*KVCEQRQHGAP Trigger: CGGGGCCCCGTGTTGCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR GCA 72 bp | AGTGCACTAAGAGACAGTGACTGTTCAGCATTTCATTaGCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SALRDSDCSAFH*HSQAPSCWFPC Trigger: ACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGTCACTGTCTCTTAGTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | ACATTTTCACACATGCATTCCAGCTTGCTTATACCCTaGCAGAACTCCTGTGGGATTCATGGCGACGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TFSHMHSSLLIP*QNSCGIHGDGS Trigger: GGACCCGTCGCCATGAATCCCACAGGAGTTCTGGCAGGGTATAAGCAAGCTGGAATGCATGTGTGAAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | GGCAAATACAAGGCTACAAGATACGACCTTCTCCTTTaGTTACCACCTGACTCTGCCCCAGGCCGATATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GKYKATRYDLLL*LPPDSAPGRYG Trigger: ACCATATCGGCCTGGGGCAGAGTCAGGTGGTAACCAAAGGAGAAGGTCGTATCTTGTAGCCTTGTATTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR TCA 72 bp | TGGTTGTTCAGAATCAGCGCCATCTCCTCTTGTAGCTaGTCTATCTCTTCTCTTTGGGTAACTCCGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLFRISAISSCS*SISSLWVTPGL Trigger: CAGACCCGGAGTTACCCAAAGAGAAGAGATAGATCAGCTACAAGAGGAGATGGCGCTGATTCTGAACAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR CCA 72 bp | AGCAGGCCCATCAGCTTTGCATACAGAAACCGACTTTaGAGCCGAGACTGTTGTTCCATAATGTGGTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SRPISFAYRNRL*SRDCCSIMWLF Trigger: GAACAACCACATTATGGAACAACAGTCTCGGCTCCAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR CCA 72 bp | TTCCCTCGGGAAGGGAGGATTAAAGAGTTAAATCTCTaGCCACAGAAAGACCAAAGAATGGGCCCACCCATT | + |
|
Preference number: 3 (lower is better) Translates to: FPREGRIKELNL*PQKDQRMGPPI Trigger: AATGGGTGGGCCCATTCTTTGGTCTTTCTGTGGCCAGAGATTTAACTCTTTAATCCTCCCTTCCCGAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | CCAGGCTTCTGGCCTATGATTCTTTCTGGCCTCATCTaGTCTACATTTTCACACATGCATTCCAGCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PGFWPMILSGLI*STFSHMHSSLL Trigger: AAGCAAGCTGGAATGCATGTGTGAAAATGTAGACCAGATGAGGCCAGAAAGAATCATAGGCCAGAAGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CCA 72 bp | TCGAGTCTTCCCAGGCTTCTGGCCTATGATTCTTTCTaGCCTCATCTGGTCTACATTTTCACACATGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLPRLLAYDSF*PHLVYIFTHAF Trigger: GAATGCATGTGTGAAAATGTAGACCAGATGAGGCCAGAAAGAATCATAGGCCAGAAGCCTGGGAAGACTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | TCATCTGGTCTACATTTTCACACATGCATTCCAGCTTaGTTATACCCTGCCAGAACTCCTGTGGGATTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SSGLHFHTCIPA*LYPARTPVGFM Trigger: CATGAATCCCACAGGAGTTCTGGCAGGGTATAAGCAAGCTGGAATGCATGTGTGAAAATGTAGACCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | TTCTTTCTGGCCTCATCTGGTCTACATTTTCACACATaGATTCCAGCTTGCTTATACCCTGCCAGAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FFLASSGLHFHT*IPACLYPARTP Trigger: AGGAGTTCTGGCAGGGTATAAGCAAGCTGGAATGCATGTGTGAAAATGTAGACCAGATGAGGCCAGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR GCA 72 bp | AAGAGCGGCAGATCCTTGGTGAACTTGATGATCTGTTaGACCATAAACGTGTTGATATCTGCAAAGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSGRSLVNLMIC*TINVLISAKCV Trigger: CACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAGTTCACCAAGGATCTGCCGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR TCA 72 bp | GAAATTCTCTGTTTGAAGACAGAACGTAGTGTTGAGTaGGATATGCAATATTTCCACAGCCGCTCCCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EILCLKTERSVE*DMQYFHSRSLE Trigger: CTCAAGGGAGCGGCTGTGGAAATATTGCATATCTCACTCAACACTACGTTCTGTCTTCAAACAGAGAATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCCCCACATGGCGAGTGTaGGCCCCCAGGAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPKLLPAGSRVGSSAVPPTWRV*APRRIW Trigger: CCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGG...GGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGC 67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGGGTCTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGCCGCTGTGCCTGTCTaGCTCGCCGCAATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PWGSGERMQAWASTANLPAAVPV*LAAMPG Trigger: CCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGC...GGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGACCCCCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075469.12 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCGCTGTGCCTGTCTaGCTCGCCGCAATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSFLLVPVWGPALYPFQAAVPV*LAAMPG Trigger: CCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGC...CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGAACATGGGGCCCACATaGCGAGTGTGGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGVQRCTLSRPVYPWGSGNMGPT*RVWAPR Trigger: CCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTT...CCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCCTGCAGGCTGGACAGTaGCGTCTCTGGGCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFLLVPVWGPALYPFQALQAGQ*RLWALL Trigger: CAGCAAGGCCCAGAGACGCCACTGTCCAGCCTGCAG...GGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTGCCGCTGTGCCTGTCTaGCTCGCCGCAATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPKLLPAGSRVGSSAVPFAAVPV*LAAMPG Trigger: CCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGC...AAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | AGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCGCCGCTGTGCCTGTCTaGCTCGCCGCAATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVPFPGQCIPGGLGKGCAAVPV*LAAMPG Trigger: CCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGC...GCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTAACATGGGGCCCACATaGCGAGTGTGGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQAPSCWFPCGVQRCTLNMGPT*RVWAPR Trigger: CCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTT...AAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGGACACTTCTGCAACCTaGAGGCTGGACAGTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGSSAVPFPGQCIPGGLGDTSAT*RLDSGV Trigger: GACGCCACTGTCCAGCCTGCAGGTTGCAGAAGTGTC...CCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCTGCAGGCTGGACAGTaGCGTCTCTGGGCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPAGSRVGSSAVPFPGLQAGQ*RLWALL Trigger: CAGCAAGGCCCAGAGACGCCACTGTCCAGCCTGCAG...GCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTAAACATGGGGCCCACATaGCGAGTGTGGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IATPKLLPAGSRVGSSAVNMGPT*RVWAPR Trigger: CCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTT...TACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGGGACAGTGGCGTCTCTaGGCCTTGCTGACCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPLPSSFLLVPVWGPALGQWRL*ALLTSH Trigger: GTGTGAGGTCAGCAAGGCCCAGAGACGCCACTGTCC...CAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACTGCAGGCTGGACAGTaGCGTCTCTGGGCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IATPKLLPAGSRVGSSAVLQAGQ*RLWALL Trigger: CAGCAAGGCCCAGAGACGCCACTGTCCAGCCTGCAG...TACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | CCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGCCCCCAGGAGGATCTaGACCAGTTCTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCGVQRCTLSRPVYPWGSAPRRI*TSSFCC Trigger: GCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGC...AGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCCCACATGGCGAGTGTaGGCCCCCAGGAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLPSSFLLVPVWGPAPTWRV*APRRIW Trigger: CCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGG...CGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGTCTCTGGGCCTTGCTaGCCTCACACCTTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSSFLLVPVWGPALYPFQVSGPC*PHTFQQ Trigger: TTGCTGGAAGGTGTGAGGTCAGCAAGGCCCAGAGAC...CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | TTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGGACAGTGGCGTCTCTaGGCCTTGCTGACCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FIATPKLLPAGSRVGSSAGQWRL*ALLTSH Trigger: GTGTGAGGTCAGCAAGGCCCAGAGACGCCACTGTCC...AGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGGCCCCCAGGAGGATCTaGACCAGTTCTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPLPSSFLLVPVWGPALAPRRI*TSSFCC Trigger: GCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGC...CAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR TCA 90 bp | TTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTCTCTGGGCCTTGCTaGCCTCACACCTTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIATPKLLPAGSRVGSSAVSGPC*PHTFQQ Trigger: TTGCTGGAAGGTGTGAGGTCAGCAAGGCCCAGAGAC...AGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR GCA 90 bp | AGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCGACACTTCTGCAACCTaGAGGCTGGACAGTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVPFPGQCIPGGLGKGCDTSAT*RLDSGV Trigger: GACGCCACTGTCCAGCCTGCAGGTTGCAGAAGTGTC...GCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | GCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGGGACAGTGGCGTCTCTaGGCCTTGCTGACCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AFHCHSQAPSCWFPCGVQGQWRL*ALLTSH Trigger: GTGTGAGGTCAGCAAGGCCCAGAGACGCCACTGTCC...CTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | AGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCGCCCCCAGGAGGATCTaGACCAGTTCTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVPFPGQCIPGGLGKGCAPRRI*TSSFCC Trigger: GCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGC...GCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGAACATGGGGCCCACATaGCGAGTGTGGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSISLPLPSSFLLVPVWNMGPT*RVWAPR Trigger: CCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTT...CCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCGTCTCTGGGCCTTGCTaGCCTCACACCTTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPGGLGKGCKPGPQLQISVSGPC*PHTFQQ Trigger: TTGCTGGAAGGTGTGAGGTCAGCAAGGCCCAGAGAC...GGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGACCCCCAGGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075469.12 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCATTCAGTTGCAAAGATaGTTTCTCTGCCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFLLVPVWGPALYPFQAIQLQR*FLCPPL Trigger: CAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAAT...GGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGCCCACATGGCGAGTGTaGGCCCCCAGGAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVQHFIATPKLLPAGSRVPTWRV*APRRIW Trigger: CCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGG...CACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCTGCCAGGGCTTCTGCTaGCAGTATCATGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPAGSRVGSSAVPFPGCQGFC*QYHVFP Trigger: AGGAAAGACATGATACTGTCAGCAGAAGCCCTGGCA...GCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTTGAGAAGGGAGATCTaGTCCTCCATGGTTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSQAPSCWFPCGVQRCTLLRREI*SSMVRD Trigger: GTCCCTAACCATGGAGGACCAGATCTCCCTTCTCAA...AAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGACATACTCAGGCTCCTaGAGATGCAGTCCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLPSSFLLVPVWGPALTYSGS*RCSPFR Trigger: CCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGT...CAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| 3UTR CAA 72 bp | CTCCCCCACCCTGCAGCTGTCCACTGGGTAGCTACGTaGAATGTTGGGTCAGGTGGGGCCCATGCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPHPAAVHWVAT*NVGSGGAHASY Trigger: ATAACTTGCATGGGCCCCACCTGACCCAACATTCAACGTAGCTACCCAGTGGACAGCTGCAGGGTGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGCGTCATAGCTGCCAGGGCTTCTGCTaGCAGTATCATGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMQAWASTANLPEQRRHSCQGFC*QYHVFP Trigger: AGGAAAGACATGATACTGTCAGCAGAAGCCCTGGCA...GCTATGACGCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075469.12 |
||
| CDS-3UTR TCA 90 bp | GTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGATCTCCTCTTGTAGCTaGTCTATCTCTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSSAVPFPGQCIPGGLGISSCS*SISSLW Trigger: CCAAAGAGAAGAGATAGATCAGCTACAAGAGGAGAT...CCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGACATTTAGACACTTCTaGAACCTGCAGGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSFLLVPVWGPALYPFQTFRHF*NLQAGQ Trigger: CTGTCCAGCCTGCAGGTTGCAGAAGTGTCTAAATGT...CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAACATTTAGACACTTCTaGAACCTGCAGGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PKLLPAGSRVGSSAVPFPTFRHF*NLQAGQ Trigger: CTGTCCAGCCTGCAGGTTGCAGAAGTGTCTAAATGT...TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGGTGTTGAGTGAGATATaGAATATTTCCACAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSSAVPFPGQCIPGGLGVLSEI*NISTAA Trigger: AGCGGCTGTGGAAATATTGCATATCTCACTCAACAC...CCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCCAGGCCCATCAGCTTTaGATACAGAAACCGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQAPSCWFPCGVQRCTLSQAHQL*IQKPTL Trigger: CAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTG...GGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGAGACTGTTGTTCCATAATGTGGTTGTTCAGAATCAGCGCCATCTCCTCCCCACATGGCGAGTGTaGGCCCCCAGGAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EPRLLFHNVVVQNQRHLLPTWRV*APRRIW Trigger: CCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGG...GAGGAGATGGCGCTGATTCTGAACAACCACATTATGGAACAACAGTCTCGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCGAGCAGCGGCGTCATAGCTTGAGAAGGGAGATCTaGTCCTCCATGGTTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RMQAWASTANLPEQRRHSLRREI*SSMVRD Trigger: GTCCCTAACCATGGAGGACCAGATCTCCCTTCTCAA...GCTATGACGCCGCTGCTCGGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075469.12 |
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| CDS-3UTR CCA 90 bp | ACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTACATACTCAGGCTCCTaGAGATGCAGTCCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPKLLPAGSRVGSSAVPFTYSGS*RCSPFR Trigger: CCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGT...AAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTCTATCTCTTCTCTTTaGGTAACTCCGGGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPAGSRVGSSAVPFPGQSISSL*VTPGLS Trigger: TGACAGACCCGGAGTTACCCAAAGAGAAGAGATAGA...CTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGATCTCCTCTTGTAGCTaGTCTATCTCTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPAGSRVGSSAVPFPGQISSCS*SISSLW Trigger: CCAAAGAGAAGAGATAGATCAGCTACAAGAGGAGAT...CTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | GTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCTATTCAGTTGCAAAGATaGTTTCTCTGCCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPFPGQCIPGGLGKGCKPIQLQR*FLCPPL Trigger: CAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAAT...AGGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGTGTTGAGTGAGATATaGAATATTTCCACAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VWGPALYPFQASVSLGVWVLSEI*NISTAA Trigger: AGCGGCTGTGGAAATATTGCATATCTCACTCAACAC...CCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGGAAATGATAGCCTGTaGCCCGGTCTCCACACACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSAFHCHSQAPSCWFPCGGNDSL*PGLHTP Trigger: TGGTGTGTGGAGACCGGGCCACAGGCTATCATTTCC...CCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | TGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCTTGAGAAGGGAGATCTaGTCCTCCATGGTTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CTLSRPVYPWGSGERMQALRREI*SSMVRD Trigger: GTCCCTAACCATGGAGGACCAGATCTCCCTTCTCAA...GGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCACCTTTCAGGTTTTTATaGAAGTGGAGGATCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKLLPAGSRVGSSAVPFPPFRFL*KWRIDS Trigger: GGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGG...TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTCCTTTCAGGTTTTTATaGAAGTGGAGGATCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSQAPSCWFPCGVQRCTLPFRFL*KWRIDS Trigger: GGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGG...AAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTCCTTTCAGGTTTTTATaGAAGTGGAGGATCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCHSQAPSCWFPCGVQRCPFRFL*KWRIDS Trigger: GGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGG...ACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | TGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCACATACTCAGGCTCCTaGAGATGCAGTCCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTLSRPVYPWGSGERMQATYSGS*RCSPFR Trigger: CCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGT...GGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGTGTTGAGTGAGATATaGAATATTTCCACAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLLPAGSRVGSSAVPFPVLSEI*NISTAA Trigger: AGCGGCTGTGGAAATATTGCATATCTCACTCAACAC...TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTATCAGGCTCCTGGAGATaGAGTCCTTTCAGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: IATPKLLPAGSRVGSSAVSGSWR*SPFRFL Trigger: TAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGA...TACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | TTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTTCAGGCTCCTGGAGATaGAGTCCTTTCAGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FIATPKLLPAGSRVGSSASGSWR*SPFRFL Trigger: TAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGA...AGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | TGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCCAGGCCCATCAGCTTTaGATACAGAAACCGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTLSRPVYPWGSGERMQAQAHQL*IQKPTL Trigger: CAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTG...GGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | GTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCTCAGGCCCATCAGCTTTaGATACAGAAACCGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPFPGQCIPGGLGKGCKPQAHQL*IQKPTL Trigger: CAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTG...AGGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCCATATTCTTCTTCACTaGCCATGGTTTCTAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ATPKLLPAGSRVGSSAVPHILLH*PWFLVL Trigger: TAACACTAGAAACCATGGCCAGTGAAGAAGAATATG...GGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSFLLVPVWGPALYPFQARFLWK*RIDSKN Trigger: GTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCT...GGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCTGTTGTTCCATAATGTaGTTGTTCAGAATCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQAPSCWFPCGVQRCTLSCCSIM*LFRISA Trigger: GGCGCTGATTCTGAACAACCACATTATGGAACAACA...GGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTTGTTGTTCCATAATGTaGTTGTTCAGAATCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCHSQAPSCWFPCGVQRCCCSIM*LFRISA Trigger: GGCGCTGATTCTGAACAACCACATTATGGAACAACA...ACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| 3UTR CAA 72 bp | ACCTTTGAGTCTGATACCCTAGGGCCAGAGACTAACTaGGTCCCTCTCCAGAGCCTACCTTGCCGGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: TFESDTLGPETN*VPLQSLPCRMT Trigger: AGTCATCCGGCAAGGTAGGCTCTGGAGAGGGACCAAGTTAGTCTCTGGCCCTAGGGTATCAGACTCAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CAA 72 bp | TGGAGCCTTCCTCAATCACTGGCGAAACAGATTCCATaGCGGCTTCAGCATCACTGTGGGCTGAGGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSLPQSLAKQIP*RLQHHCGLRLS Trigger: GGACAACCTCAGCCCACAGTGATGCTGAAGCCGCAATGGAATCTGTTTCGCCAGTGATTGAGGAAGGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCTCATGTCTTTCCTCATaGCAACATTTAGACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFLLVPVWGPALYPFQASCLSS*QHLDTS Trigger: AGAAGTGTCTAAATGTTGGCATGAGGAAAGACATGA...GGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGCATATTCTTCTTCACTaGCCATGGTTTCTAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CGVQRCTLSRPVYPWGSGHILLH*PWFLVL Trigger: TAACACTAGAAACCATGGCCAGTGAAGAAGAATATG...CCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | GCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGTCTATCTCTTCTCTTTaGGTAACTCCGGGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AFHCHSQAPSCWFPCGVQSISSL*VTPGLS Trigger: TGACAGACCCGGAGTTACCCAAAGAGAAGAGATAGA...CTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR TCA 90 bp | TCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGAAGAAATTCTCTGTTTaGAGACAGAACGTAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLPSSFLLVPVWGPALKKFSV*RQNVVL Trigger: CAACACTACGTTCTGTCTTCAAACAGAGAATTTCTT...CAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAAGAAATTCTCTGTTTaGAGACAGAACGTAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQAPSCWFPCGVQRCTLSKKFSV*RQNVVL Trigger: CAACACTACGTTCTGTCTTCAAACAGAGAATTTCTT...GGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGATTCAGTTGCAAAGATaGTTTCTCTGCCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVQHFIATPKLLPAGSRVIQLQR*FLCPPL Trigger: CAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAAT...CACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCATCAGGCTCCTGGAGATaGAGTCCTTTCAGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SISLPLPSSFLLVPVWGPSGSWR*SPFRFL Trigger: TAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGA...TGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATACTCCGGAGGTCAGCCAGGCCCCCAGGAGGATCTaGACCAGTTCTTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QALKFIGVCIVYTPEVSQAPRRI*TSSFCC Trigger: GCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGC...CTGGCTGACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGCGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075469.12 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTAAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IATPKLLPAGSRVGSSAVRFLWK*RIDSKN Trigger: GTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCT...TACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCTGTTGTTCCATAATGTaGTTGTTCAGAATCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYPFQASVSLGVWGKDASCCSIM*LFRISA Trigger: GGCGCTGATTCTGAACAACCACATTATGGAACAACA...GCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGACATATTCTTCTTCACTaGCCATGGTTTCTAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSAVPFPGQCIPGGLGKGHILLH*PWFLVL Trigger: TAACACTAGAAACCATGGCCAGTGAAGAAGAATATG...TCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AVPFPGQCIPGGLGKGCKRFLWK*RIDSKN Trigger: GTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCT...CTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFIATPKLLPAGSRVGSSRFLWK*RIDSKN Trigger: GTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCT...GCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| 3UTR CAA 72 bp | GTGAGGGTTTTGAGACACTTAGAAGTGGTGAGGGATTaGGGGACATGCAGGGAGGGAGGCTCTACCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VRVLRHLEVVRD*GTCREGGSTLL Trigger: AAGTAAGGTAGAGCCTCCCTCCCTGCATGTCCCCAAATCCCTCACCACTTCTAAGTGTCTCAAAACCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR TCA 90 bp | GTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCTAAGAAATTCTCTGTTTaGAGACAGAACGTAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPFPGQCIPGGLGKGCKPKKFSV*RQNVVL Trigger: CAACACTACGTTCTGTCTTCAAACAGAGAATTTCTT...AGGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR TCA 90 bp | CATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCAAGAAATTCTCTGTTTaGAGACAGAACGTAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFIATPKLLPAGSRVGSSKKFSV*RQNVVL Trigger: CAACACTACGTTCTGTCTTCAAACAGAGAATTTCTT...GCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAGTTCCTCCAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATACTCCGACACTTCTGCAACCTaGAGGCTGGACAGTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVPPSAEVHRSMHCLYSDTSAT*RLDSGV Trigger: GACGCCACTGTCCAGCCTGCAGGTTGCAGAAGTGTC...GGAGTATAAACAATGCATACTCCTATGAACTTCAGCGCTTGGAGGAACTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075469.12 |
||
| CDS-3UTR CCA 90 bp | ATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCATATTCTTCTTCACTaGCCATGGTTTCTAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLPSSFLLVPVWGPAHILLH*PWFLVL Trigger: TAACACTAGAAACCATGGCCAGTGAAGAAGAATATG...CGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS-3UTR CCA 90 bp | GCACTAAGAGACAGTGACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTTGAGAAGGGAGATCTaGTCCTCCATGGTTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALRDSDCSAFHCHSQAPSLRREI*SSMVRD Trigger: GTCCCTAACCATGGAGGACCAGATCTCCCTTCTCAA...GGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGTCACTGTCTCTTAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGCCTTTCAGGTTTTTATaGAAGTGGAGGATCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQHFIATPKLLPAGSRVPFRFL*KWRIDS Trigger: GGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGG...CACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACTGGGTAGCTACGTTGAATGTTGGGTCAGGTGGGGCCCATGCAAGTTATTCTATCTCTTCTCTTTaGGTAACTCCGGGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHWVATLNVGSGGAHASYSISSL*VTPGLS Trigger: TGACAGACCCGGAGTTACCCAAAGAGAAGAGATAGA...ATAACTTGCATGGGCCCCACCTGACCCAACATTCAACGTAGCTACCCAGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATACTCCGGAGGTCAGCCAGACATACTCAGGCTCCTaGAGATGCAGTCCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QALKFIGVCIVYTPEVSQTYSGS*RCSPFR Trigger: CCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGT...CTGGCTGACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075469.12 |
||
| 3UTR CAA 72 bp | CAGCAGGCCCATCAGCTTTGCATACAGAAACCGACTTaGGAGCCGAGACTGTTGTTCCATAATGTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQAHQLCIQKPT*EPRLLFHNVVV Trigger: AACAACCACATTATGGAACAACAGTCTCGGCTCCAAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGCTGTATGGCTCTGGAGTAAAGGAGAGGGACTACGGGATGTGTCTGGCTATCTCCTCTTGTAGCTaGTCTATCTCTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKLYGSGVKERDYGMCLAISSCS*SISSLW Trigger: CCAAAGAGAAGAGATAGATCAGCTACAAGAGGAGAT...AGCCAGACACATCCCGTAGTCCCTCTCCTTTACTCCAGAGCCATACAGCTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCAAGCGCTGAAGTTCATAGGAGTATGCATTGTTTATACTCCGGAGGTCATTCAGTTGCAAAGATaGTTTCTCTGCCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLQALKFIGVCIVYTPEVIQLQR*FLCPPL Trigger: CAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAAT...GACCTCCGGAGTATAAACAATGCATACTCCTATGAACTTCAGCGCTTGGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075469.12 ENSMUST00000133075.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGGGTTTTGAGACACTTAGAAGTGGTGAGGGATTTGGGGACATGCAGGGAGGTGTTGAGTGAGATATaGAATATTTCCACAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVLRHLEVVRDLGTCREVLSEI*NISTAA Trigger: AGCGGCTGTGGAAATATTGCATATCTCACTCAACAC...CTCCCTGCATGTCCCCAAATCCCTCACCACTTCTAAGTGTCTCAAAACCCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR GCA 90 bp | GACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTTCATGTCTTTCCTCATaGCAACATTTAGACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DCSAFHCHSQAPSCWFPCSCLSS*QHLDTS Trigger: AGAAGTGTCTAAATGTTGGCATGAGGAAAGACATGA...ACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGTCATGTCTTTCCTCATaGCAACATTTAGACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVQHFIATPKLLPAGSRVSCLSS*QHLDTS Trigger: AGAAGTGTCTAAATGTTGGCATGAGGAAAGACATGA...CACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| 3UTR CAA 72 bp | CTTTGCATACAGAAACCGACTTTGGAGCCGAGACTGTaGTTCCATAATGTGGTTGTTCAGAATCAGCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCIQKPTLEPRL*FHNVVVQNQRH Trigger: ATGGCGCTGATTCTGAACAACCACATTATGGAACAACAGTCTCGGCTCCAAAGTCGGTTTCTGTATGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR CAA 72 bp | CTCATCTGGTCTACATTTTCACACATGCATTCCAGCTaGCTTATACCCTGCCAGAACTCCTGTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIWSTFSHMHSS*LIPCQNSCGIH Trigger: ATGAATCCCACAGGAGTTCTGGCAGGGTATAAGCAAGCTGGAATGCATGTGTGAAAATGTAGACCAGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| 3UTR CAA 72 bp | TTGGTGAACTTGATGATCTGTTGCACCATAAACGTGTaGATATCTGCAAAGTGTGTGAGCAGAGGCAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LVNLMICCTINV*ISAKCVSRGNT Trigger: CGTGTTGCCTCTGCTCACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAGTTCACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| 3UTR CAA 72 bp | GAAGAGCGGCAGATCCTTGGTGAACTTGATGATCTGTaGCACCATAAACGTGTTGATATCTGCAAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EERQILGELDDL*HHKRVDICKVC Trigger: ACACACTTTGCAGATATCAACACGTTTATGGTGCAACAGATCATCAAGTTCACCAAGGATCTGCCGCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133075.8 |
||
| CDS-3UTR GCA 90 bp | AGTTATTACCACAAGGCCAATGAACAGGTAAGACTACCAAGCTCATCTCTTAGCTCAGGCTCCTGGAGATaGAGTCCTTTCAGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SYYHKANEQVRLPSSSLSSGSWR*SPFRFL Trigger: TAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGA...GCTAAGAGATGAGCTTGGTAGTCTTACCTGTTCATTGGCCTTGTGGTAATAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGGGTCTGGGGAAAGGATGCAAGCCTGGGCCTCAACTGCAAATCTCCCCTCCACAGCCGCTCCCTaGAGAAGGGAGATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWGSGERMQAWASTANLPSTAAP*RREIWS Trigger: GGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGA...GGGGAGATTTGCAGTTGAGGCCCAGGCTTGCATCCTTTCCCCAGACCCCCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075469.12 |
||
| CDS-3UTR CAA 90 bp | CCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATTGGCGTCTCTGGGCCTaGCTGACCTCACACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PALYPFQASVSLGVWGKDWRLWA*LTSHLP Trigger: TGGAAGGTGTGAGGTCAGCAAGGCCCAGAGACGCCA...ATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTATGGCGTCTCTGGGCCTaGCTGACCTCACACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IATPKLLPAGSRVGSSAVWRLWA*LTSHLP Trigger: TGGAAGGTGTGAGGTCAGCAAGGCCCAGAGACGCCA...TACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS CCA 90 bp | GCCGGAGGCTTGAACTGCACAAACTGGTCAAACATGGGGCCCACATaGCGAGTGTGGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGLNCTNWSNMGPT*RVWAPRRIWTSSFC Trigger: GCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTTTGACCAGTTTGTGCAGTTCAAGCCTCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | GTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGATGGGACCAATGGTTTaGCTGACTGTTCGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGSSAVPFPGQCIPGGLGMGPMV*LTVRLK Trigger: CTTCAGACGAACAGTCAGCAAAACCATTGGTCCCAT...CCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | AGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCATCCACAGCCGCTCCCTaGAGAAGGGAGATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SISLPLPSSFLLVPVWGPSTAAP*RREIWS Trigger: GGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGA...TGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS TCA 90 bp | CGAGTGTGGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTaGTTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVWAPRRIWTSSFCC*FSCKDAFSARRCAC Trigger: ACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS GCA 90 bp | GACCAGTTCTTTCTGCTGCTGATTCAGTTGCAAAGATGCTTTCTCTaGCCGCCGCTGTGCCTGTCTGGCTCGCCGCAATGCCAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DQFFLLLIQLQRCFL*PPLCLSGSPQCQGF Trigger: GAAGCCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAGAAAGAACTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS-3UTR CAA 90 bp | CGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGCTGCTGCTGATTCAGTaGCAAAGATGCTTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGSSAVPFPGQCIPGGLLLLIQ*QRCFLC Trigger: GCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAG...CAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCCCACACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS-3UTR CAA 90 bp | TCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCGCAGGCCCATCAGCTTaGCATACAGAAACCGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQAPSCWFPCGVQRCTLSAGPSA*HTETDF Trigger: AAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGC...GGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGCAGGCCCATCAGCTTaGCATACAGAAACCGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSAVPFPGQCIPGGLGKAGPSA*HTETDF Trigger: AAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGC...TTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | CTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCTGCTGCTGATTCAGTaGCAAAGATGCTTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSSFLLVPVWGPALYPFLLLIQ*QRCFLC Trigger: GCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAG...GAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAACTGCTGCTGATTCAGTaGCAAAGATGCTTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSAVPFPGQCIPGGLGKLLLIQ*QRCFLC Trigger: GCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAG...TTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS-3UTR CAA 90 bp | ACTGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGTCCACAGCCGCTCCCTaGAGAAGGGAGATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVQHFIATPKLLPAGSRVSTAAP*RREIWS Trigger: GGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGA...CACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS CCA 90 bp | GATTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCTGTCTaGCTCGCCGCAATGCCAGGGCTTCTGCTGACAGTATCATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSVAKMLSLPAAVPV*LAAMPGLLLTVSCL Trigger: AAGACATGATACTGTCAGCAGAAGCCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | AGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCATGGGACCAATGGTTTaGCTGACTGTTCGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVPFPGQCIPGGLGKGCMGPMV*LTVRLK Trigger: CTTCAGACGAACAGTCAGCAAAACCATTGGTCCCAT...GCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGTTGGAGCCGAGACTGTaGTTCCATAATGTGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSSFLLVPVWGPALYPFQLEPRL*FHNVVV Trigger: AACAACCACATTATGGAACAACAGTCTCGGCTCCAA...CTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | TGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCGCAGGCCCATCAGCTTaGCATACAGAAACCGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: CTLSRPVYPWGSGERMQAAGPSA*HTETDF Trigger: AAAGTCGGTTTCTGTATGCAAAGCTGATGGGCCTGC...GGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | GTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGCAAGCCTATGGGACCAATGGTTTaGCTGACTGTTCGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPFPGQCIPGGLGKGCKPMGPMV*LTVRLK Trigger: CTTCAGACGAACAGTCAGCAAAACCATTGGTCCCAT...AGGCTTGCATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | TACAAGGCTACAAGATACGACCTTCTCCTTTGGTTACCACCTGACTCTGCCCCATCCACAGCCGCTCCCTaGAGAAGGGAGATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YKATRYDLLLWLPPDSAPSTAAP*RREIWS Trigger: GGACCAGATCTCCCTTCTCAAGGGAGCGGCTGTGGA...TGGGGCAGAGTCAGGTGGTAACCAAAGGAGAAGGTCGTATCTTGTAGCCTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | ACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTTTGGAGCCGAGACTGTaGTTCCATAATGTGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TPKLLPAGSRVGSSAVPFLEPRL*FHNVVV Trigger: AACAACCACATTATGGAACAACAGTCTCGGCTCCAA...AAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | TTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTTTGGAGCCGAGACTGTaGTTCCATAATGTGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FIATPKLLPAGSRVGSSALEPRL*FHNVVV Trigger: AACAACCACATTATGGAACAACAGTCTCGGCTCCAA...AGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS GCA 90 bp | GCTGACAGTATCATGTCTTTCCTCATGCCAACATTTAGACACTTCTaGAACCTGCAGGCTGGACAGTGGCGTCTCTGGGCCTTGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ADSIMSFLMPTFRHF*NLQAGQWRLWALLT Trigger: GGTCAGCAAGGCCCAGAGACGCCACTGTCCAGCCTGCAGGTTGCAGAAGTGTCTAAATGTTGGCATGAGGAAAGACATGATACTGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCGAAGAAATTCTCTGTTaGAAGACAGAACGTAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSFLLVPVWGPALYPFQAEEILC*KTERSV Trigger: AACACTACGTTCTGTCTTCAAACAGAGAATTTCTTC...GGCCTGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAGCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGCTGCTGCTGATTCAGTaGCAAAGATGCTTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSAFHCHSQAPSCWFPCGLLLIQ*QRCFLC Trigger: GCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAG...CCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGCTGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS-3UTR CAA 90 bp | CCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGATGAACTTGATGATCTGTaGCACCATAAACGTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PALYPFQASVSLGVWGKDELDDL*HHKRVD Trigger: ATCAACACGTTTATGGTGCAACAGATCATCAAGTTC...ATCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | TCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTGGGGGTCTGGGGAAAGGAGAACTTGATGATCTGTaGCACCATAAACGTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSAVPFPGQCIPGGLGKGELDDL*HHKRVD Trigger: ATCAACACGTTTATGGTGCAACAGATCATCAAGTTC...TCCTTTCCCCAGACCCCCAGGGATACACTGGCCTGGAAAGGGTACAGCGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | CATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTGAAGAAATTCTCTGTTaGAAGACAGAACGTAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HCHSQAPSCWFPCGVQRCEEILC*KTERSV Trigger: AACACTACGTTCTGTCTTCAAACAGAGAATTTCTTC...ACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | TCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCGAAGAAATTCTCTGTTaGAAGACAGAACGTAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQAPSCWFPCGVQRCTLSEEILC*KTERSV Trigger: AACACTACGTTCTGTCTTCAAACAGAGAATTTCTTC...GGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS-3UTR CAA 90 bp | GCATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGGAACTTGATGATCTGTaGCACCATAAACGTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AFHCHSQAPSCWFPCGVQELDDL*HHKRVD Trigger: ATCAACACGTTTATGGTGCAACAGATCATCAAGTTC...CTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS GCA 90 bp | GAAGTGGAGGATCGACTCCAAAAACTCGTACTGGAACCCATGGACTaGGTCCTCCATCTTGTAGCAAAGAGGCCCACAGAAGAAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVEDRLQKLVLEPMD*VLHLVAKRPTEEIL Trigger: GAGAATTTCTTCTGTGGGCCTCTTTGCTACAAGATGGAGGACGCAGTCCATGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111328.8 |
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| CDS CCA 90 bp | TACTCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATGGAAGTaGAGGATCGACTCCAAAAACTCGTACTGGAACCCATGGACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YSGSWRCSPFRFLWK*RIDSKNSYWNPWTA Trigger: CGCAGTCCATGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | ATTTCATTGCCACTCCCAAGCTCCTTCCTGCTGGTTCCCGTGTGGGGTCCAGCGGAAGAAATTCTCTGTTaGAAGACAGAACGTAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISLPLPSSFLLVPVWGPAEEILC*KTERSV Trigger: AACACTACGTTCTGTCTTCAAACAGAGAATTTCTTC...CGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCTTGGGAGTGGCAATGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS TCA 90 bp | TCCATAATGTGGTTGTTCAGAATCAGCGCCATCTCCTCTTGTAGCTaGTCTATCTCTTCTCTTTGGGTAACTCCGGGTCTGTCAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIMWLFRISAISSCS*SISSLWVTPGLSGE Trigger: CTCCCCTGACAGACCCGGAGTTACCCAAAGAGAAGAGATAGATCAGCTACAAGAGGAGATGGCGCTGATTCTGAACAACCACATTATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000111328.8 ENSMUST00000155126.8 |
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| CDS CCA 90 bp | AGCACATACTCAGGCTCCTGGAGATGCAGTCCTTTCAGGTTTTTATaGAAGTGGAGGATCGACTCCAAAAACTCGTACTGGAACCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: STYSGSWRCSPFRFL*KWRIDSKNSYWNPW Trigger: CCATGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCCACTTCCATAAAAACCTGAAAGGACTGCATCTCCAGGAGCCTGAGTATGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111328.8 |
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| CDS-3UTR CAA 90 bp | CATGCAAGTTATTACCACAAGGCCAATGAACAGGTAAGACTACCAAGCTCATCTGAACTTGATGATCTGTaGCACCATAAACGTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HASYYHKANEQVRLPSSSELDDL*HHKRVD Trigger: ATCAACACGTTTATGGTGCAACAGATCATCAAGTTC...AGATGAGCTTGGTAGTCTTACCTGTTCATTGGCCTTGTGGTAATAACTTGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155126.8 |
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| CDS CCA 72 bp | GCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCTGTCTaGCTCGCCGCAATGCCAGGGCTTCTGCTGACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AKMLSLPAAVPV*LAAMPGLLLTV Trigger: TACTGTCAGCAGAAGCCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS GCA 72 bp | ATTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGCTGTaGCTGTCTGGCTCGCCGCAATGCCAGGGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IQLQRCFLCPPL*LSGSPQCQGFC Trigger: GCAGAAGCCCTGGCATTGCGGCGAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
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| CDS CAA 90 bp | GGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTGATTCAGTaGCAAAGATGCTTTCTCTGCCCGCCGCTGTGCCTGTCTGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GPQEDLDQFFLLLIQ*QRCFLCPPLCLSGS Trigger: CGAGCCAGACAGGCACAGCGGCGGGCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS CCA 72 bp | ACAAACTGGTCAAACATGGGGCCCACATGGCGAGTGTaGGCCCCCAGGAGGATCTGGACCAGTTCTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TNWSNMGPTWRV*APRRIWTSSFC Trigger: GCAGAAAGAACTGGTCCAGATCCTCCTGGGGGCCCACACTCGCCATGTGGGCCCCATGTTTGACCAGTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
||
| CDS TCA 72 bp | GCCCCCAGGAGGATCTGGACCAGTTCTTTCTGCTGCTaGTTCAGTTGCAAAGATGCTTTCTCTGCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: APRRIWTSSFCC*FSCKDAFSARR Trigger: GCGGCGGGCAGAGAAAGCATCTTTGCAACTGAATCAGCAGCAGAAAGAACTGGTCCAGATCCTCCTGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 ENSMUST00000133075.8 |
||
| CDS CAA 72 bp | CACCTTCCAGCAAACGGACAGATGGGACCAATGGTTTaGCTGACTGTTCGTCTGAAGAAGCCCTTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HLPANGQMGPMV*LTVRLKKPLQP Trigger: GGGCTGCAAGGGCTTCTTCAGACGAACAGTCAGCAAAACCATTGGTCCCATCTGTCCGTTTGCTGGAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005820.11 ENSMUST00000075469.12 ENSMUST00000111328.8 |
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