Pregenerated sensors for NR1I2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022809Ensembl transcript IDs: ENSMUST00000023504.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCACACGTTCCTGGAATGTGGGAACCTTTCCTTGGCTTCCAGTaGCCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: PPHVPGMWEPFLGFQ*PTEPQCSSDPTPSS Trigger: GGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATTCCAGGAACGTGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CCA 90 bp | CAGGTCCCCACCGCCATAGTTCTCATCCCCTCCTCCACACGTTCCTaGAATGTGGGAACCTTTCCTTGGCTTCCAGTGACCCACAGAACC | + |
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Preference number: 1 (lower is better) Translates to: QVPTAIVLIPSSTRS*NVGTFPWLPVTHRT Trigger: GGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATTCCAGGAACGTGTGGAGGAGGGGATGAGAACTATGGCGGTGGGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR GCA 90 bp | GGGAATGTGTGGGGCACGGGGGTACAACTGTTACAGGGTTCGACCTaGTCCCTCCTCTCCCACCTAACACCTGAGAATTTAGCGGGATTT | + |
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Preference number: 1 (lower is better) Translates to: GNVWGTGVQLLQGST*SLLSHLTPENLAGF Trigger: AAATCCCGCTAAATTCTCAGGTGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCCGTGCCCCACACATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR TCA 90 bp | AGCACTTCCCACAGGCTGAACTTGGGGGCTCCCATGTCTTTTTCCTaGGAAATGCTAACCAGCTGCAGTCAGAGGGCGTTGTTGGCTATC | + |
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Preference number: 1 (lower is better) Translates to: STSHRLNLGAPMSFS*EMLTSCSQRALLAI Trigger: GATAGCCAACAACGCCCTCTGACTGCAGCTGGTTAGCATTTCTCAGGAAAAAGACATGGGAGCCCCCAAGTTCAGCCTGTGGGAAGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR TCA 90 bp | ACTGTTACAGGGTTCGACCTGCTCCCTCCTCTCCCACCTAACACCTaGGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: TVTGFDLLPPLPPNT*EFSGIWKFIPNHKD Trigger: ATCTTTGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGGTGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGTCCCCACCGCCATAGTTCTCATCCCCTCCTCCACACGTTCCTGGAATGTGTTACAGGGTTCGACCTaGTCCCTCCTCTCCCACCTA | + |
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Preference number: 2 (lower is better) Translates to: QVPTAIVLIPSSTRSWNVLQGST*SLLSHL Trigger: TAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAA...CACATTCCAGGAACGTGTGGAGGAGGGGATGAGAACTATGGCGGTGGGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGCCAGCTGGTCAGAAGTGGGTGCAGACCGACCCCCACCAAGTCATGAACGAAATGCTAACCAGCTaGAGTCAGAGGGCGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SKPAGQKWVQTDPHQVMNEMLTS*SQRALL Trigger: CAACAACGCCCTCTGACTGCAGCTGGTTAGCATTTC...GTTCATGACTTGGTGGGGGTCGGTCTGCACCCACTTCTGACCAGCTGGCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCAGCAATGATACTTGTGAACCTGAAGATCAGCTCGCGTCTGGAACACAGGAAGAAGCCTGGGGCTaGGAATGTGTGGGGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: AFSNDTCEPEDQLASGTQEEAWG*ECVGHG Trigger: CCCGTGCCCCACACATTCCCAGCCCCAGGCTTCTTC...CTGTGTTCCAGACGCGAGCTGATCTTCAGGTTCACAAGTATCATTGCTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTACAACTGTTACAGGGTTCGACCTGCTCCCTCCTCTCCCACCTAACACCCCCATGTCTTTTTCCTaGGAAATGCTAACCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GGTTVTGFDLLPPLPPNTPMSFS*EMLTSC Trigger: GCAGCTGGTTAGCATTTCTCAGGAAAAAGACATGGG...GGTGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCGCAGATGCAGGAAGTTaGCTGATTTGTCCAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: WLPVTHRTPVQLRPHTKFADAGS*LICPEH Trigger: GTGTTCTGGACAAATCAGTCAACTTCCTGCATCTGC...GAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR TCA 72 bp | GTTCCTGGAATGTGGGAACCTTTCCTTGGCTTCCAGTaGCCCACAGAACCCCAGTGCAGCTCAGACCCCACA | + |
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Preference number: 3 (lower is better) Translates to: VPGMWEPFLGFQ*PTEPQCSSDPT Trigger: TGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATTCCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CCA 72 bp | TCCTCCACACGTTCCTGGAATGTGGGAACCTTTCCTTaGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: SSTRSWNVGTFP*LPVTHRTPVQL Trigger: GAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATTCCAGGAACGTGTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR GCA 72 bp | TGGGGCACGGGGGTACAACTGTTACAGGGTTCGACCTaGTCCCTCCTCTCCCACCTAACACCTGAGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: WGTGVQLLQGST*SLLSHLTPENL Trigger: TAAATTCTCAGGTGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCCGTGCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CCA 72 bp | ACCGCCATAGTTCTCATCCCCTCCTCCACACGTTCCTaGAATGTGGGAACCTTTCCTTGGCTTCCAGTGACC | + |
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Preference number: 3 (lower is better) Translates to: TAIVLIPSSTRS*NVGTFPWLPVT Trigger: GGTCACTGGAAGCCAAGGAAAGGTTCCCACATTCCAGGAACGTGTGGAGGAGGGGATGAGAACTATGGCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR CAA 90 bp | AATGTGGGAACCTTTCCTTGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCCCCACACCAAGTTCCTaGGCTGTATATCACATGCCG | + |
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Preference number: 3 (lower is better) Translates to: NVGTFPWLPVTHRTPVQLPTPSS*AVYHMP Trigger: CGGCATGTGATATACAGCCAAGGAACTTGGTGTGGG...GAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR TCA 72 bp | CACAGGCTGAACTTGGGGGCTCCCATGTCTTTTTCCTaGGAAATGCTAACCAGCTGCAGTCAGAGGGCGTTG | + |
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Preference number: 3 (lower is better) Translates to: HRLNLGAPMSFS*EMLTSCSQRAL Trigger: CAACGCCCTCTGACTGCAGCTGGTTAGCATTTCTCAGGAAAAAGACATGGGAGCCCCCAAGTTCAGCCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CCA 72 bp | AACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTaGCTGTATATCACATGCCGTTTCTTTGGCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: NPSAAQTPHQVP*LYITCRFFGST Trigger: TGTGGAGCCAAAGAAACGGCATGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR CAA 90 bp | TGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCACACAGCTGGTCACATaGTTAGTGACTAACAATGTG | + |
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Preference number: 3 (lower is better) Translates to: WLPVTHRTPVQLRPHTKFTQLVT*LVTNNV Trigger: CACATTGTTAGTCACTAACAATGTGACCAGCTGTGT...GAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR-3UTR CAA 90 bp | TGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCAACAGCCATTTCAGCTaGGTCTTCTTAAAGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: WLPVTHRTPVQLRPHTKFNSHFS*VFLKSE Trigger: CTCAGACTTTAAGAAGACCAAGCTGAAATGGCTGTT...GAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR TCA 72 bp | GGGTTCGACCTGCTCCCTCCTCTCCCACCTAACACCTaGGAATTTAGCGGGATTTGGAAGTTTATTCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: GFDLLPPLPPNT*EFSGIWKFIPN Trigger: GTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGGTGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CCA 72 bp | CCAAGTTCCTTGGCTGTATATCACATGCCGTTTCTTTaGCTCCACATGAATTGTTTAAGAAGGTTTTACAAG | + |
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Preference number: 3 (lower is better) Translates to: PSSLAVYHMPFL*LHMNCLRRFYK Trigger: CTTGTAAAACCTTCTTAAACAATTCATGTGGAGCCAAAGAAACGGCATGTGATATACAGCCAAGGAACTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | TGTCACTGTAGCTTTGCTGTAAGTCACAGCCTTGGGAGCAAGCCAGCTGGTCAGCGGCAGGCCTGGCACTaGCGTCGTGTCTTCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CHCSFAVSHSLGSKPAGQRQAWH*RRVFRV Trigger: CACCCGGAAGACACGACGGCAGTGCCAGGCCTGCCG...CTGACCAGCTGGCTTGCTCCCAAGGCTGTGACTTACAGCAAAGCTACAGTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | CAGGTCCCCACCGCCATAGTTCTCATCCCCTCCTCCACACGTTCCTGGAATGTGAGGGTCTTCCAACAGTaGGGCCTGCAGAAACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVPTAIVLIPSSTRSWNVRVFQQ*GLQKLW Trigger: CCAGAGTTTCTGCAGGCCTCACTGTTGGAAGACCCT...CACATTCCAGGAACGTGTGGAGGAGGGGATGAGAACTATGGCGGTGGGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | CAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTGGCTGTATATCACAATCAAGGCCCGCCTCTaGTCCACAGCGGCATCGGAC | + |
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Preference number: 4 (lower is better) Translates to: QNPSAAQTPHQVPWLYITIKARL*STAASD Trigger: GTCCGATGCCGCTGTGGAGCAGAGGCGGGCCTTGAT...TGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | TGGTCAGAAGTGGGTGCAGACCGACCCCCACCAAGTCATGAACAGGTCCCCACCTTCAGCAGGGAGATCTaGTCCTCAATAGGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WSEVGADRPPPSHEQVPTFSREI*SSIGRS Trigger: GGACCTGCCTATTGAGGACCAGATCTCCCTGCTGAA...GGTGGGGACCTGTTCATGACTTGGTGGGGGTCGGTCTGCACCCACTTCTGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | ACGGGGGTACAACTGTTACAGGGTTCGACCTGCTCCCTCCTCTCCCACCTAACACACACCAGGACGATCTaGGGAGAAGAGGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: TGVQLLQGSTCSLLSHLTHTRTI*GEEGDG Trigger: GCCATCTCCCTCTTCTCCCCAGATCGTCCTGGTGTG...TGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | CAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTGGCTGTATATCACAGTCGTGTCTTCCGGGTaGTCTCGCAGGTTCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QNPSAAQTPHQVPWLYITVVSSG*SRRFPC Trigger: GCAAGGGAACCTGCGAGATCACCCGGAAGACACGAC...TGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | AGCAAGCCAGCTGGTCAGAAGTGGGTGCAGACCGACCCCCACCAAGTCATGAACTCAAAGGTTTGCATCTaGGCGTCCATCAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKPAGQKWVQTDPHQVMNSKVCI*ASISSW Trigger: CCAGGAGCTGATGGACGCTCAGATGCAAACCTTTGA...GTTCATGACTTGGTGGGGGTCGGTCTGCACCCACTTCTGACCAGCTGGCTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | ACGGGGGTACAACTGTTACAGGGTTCGACCTGCTCCCTCCTCTCCCACCTAACAGGCCTGCAGAAACTCTaGAAGCTCACAGCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: TGVQLLQGSTCSLLSHLTGLQKL*KLTATV Trigger: CACAGTGGCTGTGAGCTTCCAGAGTTTCTGCAGGCC...TGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | AGCAAGCCAGCTGGTCAGAAGTGGGTGCAGACCGACCCCCACCAAGTCATGAACGGGAGAAGAGGGAGATaGCCTGCATCAGCACATACT | + |
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Preference number: 4 (lower is better) Translates to: SKPAGQKWVQTDPHQVMNGRRGR*PASAHT Trigger: AGTATGTGCTGATGCAGGCCATCTCCCTCTTCTCCC...GTTCATGACTTGGTGGGGGTCGGTCTGCACCCACTTCTGACCAGCTGGCTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CAA 72 bp | CTCCTCCACACGTTCCTGGAATGTGGGAACCTTTCCTaGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLHTFLECGNLS*ASSDPQNPSAA Trigger: AGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATTCCAGGAACGTGTGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | TGTCACTGTAGCTTTGCTGTAAGTCACAGCCTTGGGAGCAAGCCAGCTGGTCAGCCCTCTTCTTCCTCTTaGTCAAGGCCCGCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CHCSFAVSHSLGSKPAGQPSSSS*SRPASA Trigger: AGCAGAGGCGGGCCTTGATCAAGAGGAAGAAGAGGG...CTGACCAGCTGGCTTGCTCCCAAGGCTGTGACTTACAGCAAAGCTACAGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | CAGGTCCCCACCGCCATAGTTCTCATCCCCTCCTCCACACGTTCCTGGAATGTGGCAGCCGGAAATCCTTaGAGTGGGAGAAAGTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QVPTAIVLIPSSTRSWNVAAGNP*SGRKLC Trigger: ACACAACTTTCTCCCACTTCAAGGATTTCCGGCTGC...CACATTCCAGGAACGTGTGGAGGAGGGGATGAGAACTATGGCGGTGGGGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | GGGGGTACAACTGTTACAGGGTTCGACCTGCTCCCTCCTCTCCCACCTAACACCTCCAACAGTGAGGCCTaGAGAAACTCTGGAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GGTTVTGFDLLPPLPPNTSNSEA*RNSGSS Trigger: TGAGCTTCCAGAGTTTCTGCAGGCCTCACTGTTGGA...GGTGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTCATCTCTTTCTTCATaGCACTCTCCAGGCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: ASSDPQNPSAAQTPHQVPSSLSS*HSPGTC Trigger: GCAAGTGCCTGGAGAGTGGCATGAAGAAAGAGATGA...AGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | GCTAACCAGCTGCAGTCAGAGGGCGTTGTTGGCTATCAGTATGTCCATCTGTCTGCGTCCATCAGCTCCTaGATCAGCGCCTGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ANQLQSEGVVGYQYVHLSASISS*ISACCS Trigger: AGAACAGCAGGCGCTGATCCAGGAGCTGATGGACGC...AGACAGATGGACATACTGATAGCCAACAACGCCCTCTGACTGCAGCTGGTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTGGTCAGAAGTGGGTGCAGACCGACCCCCACCAAGTCATGAACAGGTCCTCCAACAGAAGTTTCTaGAAGCCACCATTAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PAGQKWVQTDPHQVMNRSSNRSF*KPPLGS Trigger: AGACCCTAATGGTGGCTTCCAGAAACTTCTGTTGGA...GGACCTGTTCATGACTTGGTGGGGGTCGGTCTGCACCCACTTCTGACCAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| 3UTR CAA 72 bp | CCCCCTCCCCGACACACACCCACACAGCTGGTCACATaGTTAGTGACTAACAATGTGTTTGGGCAGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPPRHTPTQLVT*LVTNNVFGQMQ Trigger: CTGCATCTGCCCAAACACATTGTTAGTCACTAACAATGTGACCAGCTGTGTGGGTGTGTGTCGGGGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | GCTAACCAGCTGCAGTCAGAGGGCGTTGTTGGCTATCAGTATGTCCATCTGTCTATGCGCAGCAACTGCTaGGTTTGCTGGGCGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: ANQLQSEGVVGYQYVHLSMRSNC*VCWALM Trigger: CATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCAT...AGACAGATGGACATACTGATAGCCAACAACGCCCTCTGACTGCAGCTGGTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | AATGTGGGAACCTTTCCTTGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCTGTCGAACATCGTGTTaGACCTCAGGATGCACATCT | + |
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Preference number: 4 (lower is better) Translates to: NVGTFPWLPVTHRTPVQLCRTSC*TSGCTS Trigger: AGATGTGCATCCTGAGGTTCAACACGATGTTCGACA...GAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | TCCCACCTAACACCTGAGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACATCTCGCAGGTTCCCTTaGGGAAGGGGCACCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SHLTPENLAGFGSLFPTTSRRFP*GRGTSA Trigger: GGCTGAGGTGCCCCTTCCGCAAGGGAACCTGCGAGA...TGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGGTGTTAGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | TGTCACTGTAGCTTTGCTGTAAGTCACAGCCTTGGGAGCAAGCCAGCTGGTCAGGTTTCATGGCCCTTCTaGAAAACCCCTTGCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: CHCSFAVSHSLGSKPAGQVSWPF*KTPCIL Trigger: AAGGATGCAAGGGGTTTTTCAGAAGGGCCATGAAAC...CTGACCAGCTGGCTTGCTCCCAAGGCTGTGACTTACAGCAAAGCTACAGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTGTAGCTTCTTCAGCATaGAGTGGAATTTCATCAATG | + |
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Preference number: 4 (lower is better) Translates to: ASSDPQNPSAAQTPHQVPVASSA*SGISSM Trigger: CATTGATGAAATTCCACTGCATGCTGAAGAAGCTAC...AGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | GCCTTCAGCAATGATACTTGTGAACCTGAAGATCAGCTCGCGTCTGGAACACAGTGCACATCTCAAAAGTaGCCCCCTTCAGCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AFSNDTCEPEDQLASGTQCTSQK*PPSAGR Trigger: TCTCCCTGCTGAAGGGGGCCACTTTTGAGATGTGCA...CTGTGTTCCAGACGCGAGCTGATCTTCAGGTTCACAAGTATCATTGCTGAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | CTGCTAGCCTTCAGCAATGATACTTGTGAACCTGAAGATCAGCTCGCGTCTGGACATACACGGCAGATTTaGAGACCTCCATCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLAFSNDTCEPEDQLASGHTRQI*RPPSSS Trigger: GGAGGAAGATGGAGGTCTTCAAATCTGCCGTGTATG...TCCAGACGCGAGCTGATCTTCAGGTTCACAAGTATCATTGCTGAAGGCTAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | GCCTTCAGCAATGATACTTGTGAACCTGAAGATCAGCTCGCGTCTGGAACACAGCAGCGGCATCGGACATaGTCATCTCTTTCTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: AFSNDTCEPEDQLASGTQQRHRT*SSLSSC Trigger: GCATGAAGAAAGAGATGATCATGTCCGATGCCGCTG...CTGTGTTCCAGACGCGAGCTGATCTTCAGGTTCACAAGTATCATTGCTGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | CAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTGGCTGTATATCACATTCCAAGGCAGAGTCTaGTTCTTCACACTGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: QNPSAAQTPHQVPWLYITFQGRV*FFTLYK Trigger: CTTGTACAGTGTGAAGAAGCAGACTCTGCCTTGGAA...TGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | ACGGGGGTACAACTGTTACAGGGTTCGACCTGCTCCCTCCTCTCCCACCTAACATTCTTCAGCATGCAGTaGAATTTCATCAATGGATCC | + |
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Preference number: 4 (lower is better) Translates to: TGVQLLQGSTCSLLSHLTFFSMQ*NFINGS Trigger: GGATCCATTGATGAAATTCCACTGCATGCTGAAGAA...TGTTAGGTGGGAGAGGAGGGAGCAGGTCGAACCCTGTAACAGTTGTACCCCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | CCTGAGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACAAAGATTGTCTTAGGGGTGGCAAAGGGGTaGGAGTCTTGGATGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PENLAGFGSLFPTTKIVLGVAKG*ESWMRS Trigger: GCTGCGCATCCAAGACTCGCACCCCTTTGCCACCCC...TAAGACAATCTTTGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CCA 90 bp | GCTAACCAGCTGCAGTCAGAGGGCGTTGTTGGCTATCAGTATGTCCATCTGTCTCGGAAATCCTTGAAGTaGGAGAAAGTTGTGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ANQLQSEGVVGYQYVHLSRKSLK*EKVVSK Trigger: CTTTGACACAACTTTCTCCCACTTCAAGGATTTCCG...AGACAGATGGACATACTGATAGCCAACAACGCCCTCTGACTGCAGCTGGTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | TCCCACCTAACACCTGAGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACAGAACCCTGTCTTTCATaGTTTGACTCCATGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHLTPENLAGFGSLFPTTEPCLS*FDSMWQ Trigger: CTGCCACATGGAGTCAAATCATGAAAGACAGGGTTC...TGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGGTGTTAGGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR GCA 90 bp | CCTGAGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACAAAGATTGTCTTAAAGAGGGAGATGGCCTaGATCAGCACATACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PENLAGFGSLFPTTKIVLKREMA*ISTYSS Trigger: GGAGGAGTATGTGCTGATGCAGGCCATCTCCCTCTT...TAAGACAATCTTTGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR TCA 90 bp | CCTGAGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACAAAGATTGTCTTACTGTCTTTCATGATTTaGCTCCATGTGGCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PENLAGFGSLFPTTKIVLLSFMI*LHVAGS Trigger: AGACCCTGCCACATGGAGTCAAATCATGAAAGACAG...TAAGACAATCTTTGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 90 bp | ACTTGCGCAAACGGCAGGCCTGGCACTGCCGTCGTGTCTTCCGGGTaGTCTCGCAGGTTCCCTTGCGGAAGGGGCACCTCAGCCGGACAT | + |
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Preference number: 5 (lower is better) Translates to: TCANGRPGTAVVSSG*SRRFPCGRGTSAGH Trigger: ATGTCCGGCTGAGGTGCCCCTTCCGCAAGGGAACCTGCGAGATCACCCGGAAGACACGACGGCAGTGCCAGGCCTGCCGTTTGCGCAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | AGTGGGGTGGCAAAGGGGTGCGAGTCTTGGATGCGCAGCAACTGCTaGGTTTGCTGGGCGTTGATGCTTCGCAGCTCAGTGAGGACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVAKGCESWMRSNC*VCWALMLRSSVRTA Trigger: GGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGCCACCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCATCTCGCAGGTTCCCTaGCGGAAGGGGCACCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLPVTHRTPVQLRPHTKFISQVP*RKGHLS Trigger: GCTGAGGTGCCCCTTCCGCAAGGGAACCTGCGAGAT...GAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 90 bp | GCCGGCCGCACTCCCAGGTTCCCGTTTCCGTGTCGAACATCGTGTTaGACCTCAGGATGCACATCTCAAAAGTGGCCCCCTTCAGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AGRTPRFPFPCRTSC*TSGCTSQKWPPSAG Trigger: CCCTGCTGAAGGGGGCCACTTTTGAGATGTGCATCCTGAGGTTCAACACGATGTTCGACACGGAAACGGGAACCTGGGAGTGCGGCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 90 bp | GTGGCAAAGGGGTGCGAGTCTTGGATGCGCAGCAACTGCTGGGTTTaGTGGGCGTTGATGCTTCGCAGCTCAGTGAGGACGGCCATGATC | + |
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Preference number: 5 (lower is better) Translates to: VAKGCESWMRSNCWV*WALMLRSSVRTAMI Trigger: GATCATGGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | TCTTTCTTCATGCCACTCTCCAGGCACTTGCGCAAACGGCAGGCCTaGCACTGCCGTCGTGTCTTCCGGGTGATCTCGCAGGTTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFMPLSRHLRKRQA*HCRRVFRVISQVPL Trigger: CAAGGGAACCTGCGAGATCACCCGGAAGACACGACGGCAGTGCCAGGCCTGCCGTTTGCGCAAGTGCCTGGAGAGTGGCATGAAGAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | GCAAAGGGGTGCGAGTCTTGGATGCGCAGCAACTGCTGGGTTTGCTaGGCGTTGATGCTTCGCAGCTCAGTGAGGACGGCCATGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: AKGCESWMRSNCWVC*ALMLRSSVRTAMIF Trigger: GAAGATCATGGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 90 bp | TCTCTTTCCCGTCGCTCTTGGAAGGGGGTTGGTAGTTCCAGATGCTaGCGTCTTCTCCGCGCAGCTGCAGAGAGATCTTCATTGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSRRSWKGVGSSRC*RLLRAAAERSSLEP Trigger: GGGTTCCAATGAAGATCTCTCTGCAGCTGCGCGGAGAAGACGGCAGCATCTGGAACTACCAACCCCCTTCCAAGAGCGACGGGAAAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | GCCTTCAGCAATGATACTTGTGAACCTGAAGATCAGCTCGCGTCTGGAACACAGCCACTCTCCAGGCACTaGCGCAAACGGCAGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AFSNDTCEPEDQLASGTQPLSRH*RKRQAW Trigger: CCAGGCCTGCCGTTTGCGCAAGTGCCTGGAGAGTGG...CTGTGTTCCAGACGCGAGCTGATCTTCAGGTTCACAAGTATCATTGCTGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | AATGTGGGAACCTTTCCTTGGCTTCCAGTGACCCACAGAACCCCAGTGCAGCTCTCCCTCTTCTTCCTCTaGATCAAGGCCCGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVGTFPWLPVTHRTPVQLSLFFL*IKARLC Trigger: GCAGAGGCGGGCCTTGATCAAGAGGAAGAAGAGGGA...GAGCTGCACTGGGGTTCTGTGGGTCACTGGAAGCCAAGGAAAGGTTCCCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 90 bp | TCTGTGCTGCTAAATAACTCTTGCATGAGTGGGGTGGCAAAGGGGTaGGAGTCTTGGATGCGCAGCAACTGCTGGGTTTGCTGGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLNNSCMSGVAKG*ESWMRSNCWVCWAL Trigger: CAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGCCACCCCACTCATGCAAGAGTTATTTAGCAGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | CTAAATAACTCTTGCATGAGTGGGGTGGCAAAGGGGTGCGAGTCTTaGATGCGCAGCAACTGCTGGGTTTGCTGGGCGTTGATGCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: LNNSCMSGVAKGCES*MRSNCWVCWALMLR Trigger: GCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGCCACCCCACTCATGCAAGAGTTATTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | CAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTGGCTGTATATCACACACCTCAGCCGGACATaGCGTTTCATGGCCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QNPSAAQTPHQVPWLYITHLSRT*RFMALL Trigger: CAGAAGGGCCATGAAACGCAATGTCCGGCTGAGGTG...TGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | CCAGCTGGTCAGAAGTGGGTGCAGACCGACCCCCACCAAGTCATGAACAGGTCCATGACTTTGGCGAAGTaGATGACGCCCTTGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: PAGQKWVQTDPHQVMNRSMTLAK*MTPLNM Trigger: CATGTTCAAGGGCGTCATCAACTTCGCCAAAGTCAT...GGACCTGTTCATGACTTGGTGGGGGTCGGTCTGCACCCACTTCTGACCAGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | CAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTGGCTGTATATCACACAGCAACTGCTGGGTTaGCTGGGCGTTGATGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QNPSAAQTPHQVPWLYITQQLLG*LGVDAS Trigger: CGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTG...TGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 90 bp | TCCATCTTCCTCCTCTACGTTGATGGGCTCTTCCAAGGCAGAGTCTaGTTCTTCACACTGTACAAGGCCAACTCGGCTCCAGCTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SIFLLYVDGLFQGRV*FFTLYKANSAPALL Trigger: GAGGAGAGCTGGAGCCGAGTTGGCCTTGTACAGTGTGAAGAAGCAGACTCTGCCTTGGAAGAGCCCATCAACGTAGAGGAGGAAGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | GAGGACGGCCATGATCTTCAGGAACAGGAACCTGTGAGCAGGATATaGCCGACTACACTCAATGTAGGCCTTCAGGGTGAGGGCAAACCT | + |
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Preference number: 5 (lower is better) Translates to: EDGHDLQEQEPVSRI*PTTLNVGLQGEGKP Trigger: AGGTTTGCCCTCACCCTGAAGGCCTACATTGAGTGTAGTCGGCCATATCCTGCTCACAGGTTCCTGTTCCTGAAGATCATGGCCGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | CAGGTCCCCACCGCCATAGTTCTCATCCCCTCCTCCACACGTTCCTGGAATGTGACATACACGGCAGATTaGAAGACCTCCATCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QVPTAIVLIPSSTRSWNVTYTAD*KTSIFL Trigger: GAGGAAGATGGAGGTCTTCAAATCTGCCGTGTATGT...CACATTCCAGGAACGTGTGGAGGAGGGGATGAGAACTATGGCGGTGGGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 90 bp | CTCCGCGCAGCTGCAGAGAGATCTTCATTGGAACCCTGTCTTTCATaGTTTGACTCCATGTGGCAGGGTCTTCCAACAGTGAGGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LRAAAERSSLEPCLS*FDSMWQGLPTVRPA Trigger: TGCAGGCCTCACTGTTGGAAGACCCTGCCACATGGAGTCAAATCATGAAAGACAGGGTTCCAATGAAGATCTCTCTGCAGCTGCGCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | TCCAACAGTGAGGCCTGCAGAAACTCTGGAAGCTCACAGCCACTGTaGAACACTGCAGGCAGCCGGAAATCCTTGAAGTGGGAGAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: SNSEACRNSGSSQPL*NTAGSRKSLKWEKV Trigger: AACTTTCTCCCACTTCAAGGATTTCCGGCTGCCTGCAGTGTTCCACAGTGGCTGTGAGCTTCCAGAGTTTCTGCAGGCCTCACTGTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | CCAGATGCTGCCGTCTTCTCCGCGCAGCTGCAGAGAGATCTTCATTaGAACCCTGTCTTTCATGATTTGACTCCATGTGGCAGGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PDAAVFSAQLQRDLH*NPVFHDLTPCGRVF Trigger: GAAGACCCTGCCACATGGAGTCAAATCATGAAAGACAGGGTTCCAATGAAGATCTCTCTGCAGCTGCGCGGAGAAGACGGCAGCATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 90 bp | GAAGCTCACAGCCACTGTGGAACACTGCAGGCAGCCGGAAATCCTTaGAGTGGGAGAAAGTTGTGTCAAAGGTTTGCATCTGAGCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: EAHSHCGTLQAAGNP*SGRKLCQRFASERP Trigger: TGGACGCTCAGATGCAAACCTTTGACACAACTTTCTCCCACTTCAAGGATTTCCGGCTGCCTGCAGTGTTCCACAGTGGCTGTGAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 90 bp | CGCAGCTGCAGAGAGATCTTCATTGGAACCCTGTCTTTCATGATTTaGCTCCATGTGGCAGGGTCTTCCAACAGTGAGGCCTGCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: RSCREIFIGTLSFMI*LHVAGSSNSEACRN Trigger: GTTTCTGCAGGCCTCACTGTTGGAAGACCCTGCCACATGGAGTCAAATCATGAAAGACAGGGTTCCAATGAAGATCTCTCTGCAGCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 90 bp | GGATATGACTTTGGCGAAGTTGATGACGCCCTTGAACATGTAGGTTaGCACATCGGCCAGGTGTGGCAGAAGAGGGATGATCTCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GYDFGEVDDALEHVG*HIGQVWQKRDDLFP Trigger: GGGAAAGAGATCATCCCTCTTCTGCCACACCTGGCCGATGTGTCAACCTACATGTTCAAGGGCGTCATCAACTTCGCCAAAGTCATATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | CAGAACCCCAGTGCAGCTCAGACCCCACACCAAGTTCCTTGGCTGTATATCACAAGTTGTGTCAAAGGTTaGCATCTGAGCGTCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNPSAAQTPHQVPWLYITSCVKG*HLSVHQ Trigger: CTGATGGACGCTCAGATGCAAACCTTTGACACAACT...TGTGATATACAGCCAAGGAACTTGGTGTGGGGTCTGAGCTGCACTGGGGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS-3UTR CAA 90 bp | TCCCACCTAACACCTGAGAATTTAGCGGGATTTGGAAGTTTATTCCCAACCACACCTGTCTTTCATGATTaGACTCCATGTGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SHLTPENLAGFGSLFPTTPVFHD*TPCGRV Trigger: GACCCTGCCACATGGAGTCAAATCATGAAAGACAGG...TGTGGTTGGGAATAAACTTCCAAATCCCGCTAAATTCTCAGGTGTTAGGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 90 bp | AGCACATACTCCTCCTTATGCAGCTGTAGCTTCTTCAGCATGCAGTaGAATTTCATCAATGGATCCAACAGAAGTTTCTGGAAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: STYSSLCSCSFFSMQ*NFINGSNRSFWKPP Trigger: TGGTGGCTTCCAGAAACTTCTGTTGGATCCATTGATGAAATTCCACTGCATGCTGAAGAAGCTACAGCTGCATAAGGAGGAGTATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | AACGGCAGGCCTGGCACTGCCGTCGTGTCTTCCGGGTaGTCTCGCAGGTTCCCTTGCGGAAGGGGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: NGRPGTAVVSSG*SRRFPCGRGTS Trigger: TGAGGTGCCCCTTCCGCAAGGGAACCTGCGAGATCACCCGGAAGACACGACGGCAGTGCCAGGCCTGCCGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | ATGCCACTCTCCAGGCACTTGCGCAAACGGCAGGCCTaGCACTGCCGTCGTGTCTTCCGGGTGATCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MPLSRHLRKRQA*HCRRVFRVISQ Trigger: CTGCGAGATCACCCGGAAGACACGACGGCAGTGCCAGGCCTGCCGTTTGCGCAAGTGCCTGGAGAGTGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 90 bp | GCCTGGCACTGCCGTCGTGTCTTCCGGGTGATCTCGCAGGTTCCCTaGCGGAAGGGGCACCTCAGCCGGACATTGCGTTTCATGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AWHCRRVFRVISQVP*RKGHLSRTLRFMAL Trigger: AAGGGCCATGAAACGCAATGTCCGGCTGAGGTGCCCCTTCCGCAAGGGAACCTGCGAGATCACCCGGAAGACACGACGGCAGTGCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 72 bp | TCCTGGATCAGCGCCTGCTGTTCTTCCGTCAGCCCCTaGCCTCCAGGCGGTGGAGCCTCAATCTTTTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SWISACCSSVSP*PPGGGASIFSL Trigger: GAGGGAAAAGATTGAGGCTCCACCGCCTGGAGGGCAGGGGCTGACGGAAGAACAGCAGGCGCTGATCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 72 bp | TGCCGTCGTGTCTTCCGGGTGATCTCGCAGGTTCCCTaGCGGAAGGGGCACCTCAGCCGGACATTGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CRRVFRVISQVP*RKGHLSRTLRF Trigger: GAAACGCAATGTCCGGCTGAGGTGCCCCTTCCGCAAGGGAACCTGCGAGATCACCCGGAAGACACGACGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | TGCGAGTCTTGGATGCGCAGCAACTGCTGGGTTTGCTaGGCGTTGATGCTTCGCAGCTCAGTGAGGACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CESWMRSNCWVC*ALMLRSSVRTA Trigger: GGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 72 bp | GGGGTGCGAGTCTTGGATGCGCAGCAACTGCTGGGTTaGCTGGGCGTTGATGCTTCGCAGCTCAGTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GVRVLDAQQLLG*LGVDASQLSED Trigger: GTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 90 bp | GGTGGCAAAGGGGTGCGAGTCTTGGATGCGCAGCAACTGCTGGGTTaGCTGGGCGTTGATGCTTCGCAGCTCAGTGAGGACGGCCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGKGVRVLDAQQLLG*LGVDASQLSEDGHD Trigger: ATCATGGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 72 bp | TCCCGTCGCTCTTGGAAGGGGGTTGGTAGTTCCAGATaGTGCCGTCTTCTCCGCGCAGCTGCAGAGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRSWKGVGSSR*CRLLRAAAERS Trigger: AGATCTCTCTGCAGCTGCGCGGAGAAGACGGCAGCATCTGGAACTACCAACCCCCTTCCAAGAGCGACGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | GCAAAGGGGTGCGAGTCTTGGATGCGCAGCAACTGCTaGGTTTGCTGGGCGTTGATGCTTCGCAGCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: AKGCESWMRSNC*VCWALMLRSSV Trigger: CACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | TCTTGCATGAGTGGGGTGGCAAAGGGGTGCGAGTCTTaGATGCGCAGCAACTGCTGGGTTTGCTGGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SCMSGVAKGCES*MRSNCWVCWAL Trigger: CAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCCCTTTGCCACCCCACTCATGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 90 bp | GCATCGGACATGATCATCTCTTTCTTCATGCCACTCTCCAGGCACTaGCGCAAACGGCAGGCCTGGCACTGCCGTCGTGTCTTCCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASDMIISFFMPLSRH*RKRQAWHCRRVFRV Trigger: CACCCGGAAGACACGACGGCAGTGCCAGGCCTGCCGTTTGCGCAAGTGCCTGGAGAGTGGCATGAAGAAAGAGATGATCATGTCCGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 90 bp | GGGTGCGAGTCTTGGATGCGCAGCAACTGCTGGGTTTGCTGGGCGTaGATGCTTCGCAGCTCAGTGAGGACGGCCATGATCTTCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GCESWMRSNCWVCWA*MLRSSVRTAMIFRN Trigger: GTTCCTGAAGATCATGGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGACTCGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 90 bp | TGGCAGAAGAGGGATGATCTCTTTCCCGTCGCTCTTGGAAGGGGGTaGGTAGTTCCAGATGCTGCCGTCTTCTCCGCGCAGCTGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: WQKRDDLFPVALGRG*VVPDAAVFSAQLQR Trigger: TCTCTGCAGCTGCGCGGAGAAGACGGCAGCATCTGGAACTACCAACCCCCTTCCAAGAGCGACGGGAAAGAGATCATCCCTCTTCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 72 bp | CGTCGCTCTTGGAAGGGGGTTGGTAGTTCCAGATGCTaGCGTCTTCTCCGCGCAGCTGCAGAGAGATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRSWKGVGSSRC*RLLRAAAERSS Trigger: TGAAGATCTCTCTGCAGCTGCGCGGAGAAGACGGCAGCATCTGGAACTACCAACCCCCTTCCAAGAGCGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 72 bp | TCTTGGATGCGCAGCAACTGCTGGGTTTGCTGGGCGTaGATGCTTCGCAGCTCAGTGAGGACGGCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: SWMRSNCWVCWA*MLRSSVRTAMI Trigger: GATCATGGCCGTCCTCACTGAGCTGCGAAGCATCAACGCCCAGCAAACCCAGCAGTTGCTGCGCATCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | AGGTTGACACATCGGCCAGGTGTGGCAGAAGAGGGATaGTCTCTTTCCCGTCGCTCTTGGAAGGGGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: RLTHRPGVAEEG*SLSRRSWKGVG Trigger: ACCAACCCCCTTCCAAGAGCGACGGGAAAGAGATCATCCCTCTTCTGCCACACCTGGCCGATGTGTCAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | GAGGCCTGCAGAAACTCTGGAAGCTCACAGCCACTGTaGAACACTGCAGGCAGCCGGAAATCCTTGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: EACRNSGSSQPL*NTAGSRKSLKW Trigger: CCACTTCAAGGATTTCCGGCTGCCTGCAGTGTTCCACAGTGGCTGTGAGCTTCCAGAGTTTCTGCAGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 72 bp | ATGATCATCTCTTTCTTCATGCCACTCTCCAGGCACTaGCGCAAACGGCAGGCCTGGCACTGCCGTCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: MIISFFMPLSRH*RKRQAWHCRRV Trigger: GACACGACGGCAGTGCCAGGCCTGCCGTTTGCGCAAGTGCCTGGAGAGTGGCATGAAGAAAGAGATGATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | GATATGGCCGACTACACTCAATGTAGGCCTTCAGGGTaGGGGCAAACCTCTCCTGCAGTTGGTCTACCACGC | + |
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Preference number: 6 (lower is better) Translates to: DMADYTQCRPSG*GQTSPAVGLPR Trigger: GCGTGGTAGACCAACTGCAGGAGAGGTTTGCCCTCACCCTGAAGGCCTACATTGAGTGTAGTCGGCCATATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | ACTCCCAGGTTCCCGTTTCCGTGTCGAACATCGTGTTaGACCTCAGGATGCACATCTCAAAAGTGGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: TPRFPFPCRTSC*TSGCTSQKWPP Trigger: AGGGGGCCACTTTTGAGATGTGCATCCTGAGGTTCAACACGATGTTCGACACGGAAACGGGAACCTGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 90 bp | AGGCAGCCGGAAATCCTTGAAGTGGGAGAAAGTTGTGTCAAAGGTTaGCATCTGAGCGTCCATCAGCTCCTGGATCAGCGCCTGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RQPEILEVGESCVKG*HLSVHQLLDQRLLF Trigger: GAACAGCAGGCGCTGATCCAGGAGCTGATGGACGCTCAGATGCAAACCTTTGACACAACTTTCTCCCACTTCAAGGATTTCCGGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | CATGATTTGACTCCATGTGGCAGGGTCTTCCAACAGTaGGGCCTGCAGAAACTCTGGAAGCTCACAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: HDLTPCGRVFQQ*GLQKLWKLTAT Trigger: AGTGGCTGTGAGCTTCCAGAGTTTCTGCAGGCCTCACTGTTGGAAGACCCTGCCACATGGAGTCAAATCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 72 bp | TTTTCCCTCTTCTTCCTCTTGATCAAGGCCCGCCTCTaGTCCACAGCGGCATCGGACATGATCATCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSLFFLLIKARL*STAASDMIISF Trigger: GAAAGAGATGATCATGTCCGATGCCGCTGTGGAGCAGAGGCGGGCCTTGATCAAGAGGAAGAAGAGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | GCCGTCTTCTCCGCGCAGCTGCAGAGAGATCTTCATTaGAACCCTGTCTTTCATGATTTGACTCCATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: AVFSAQLQRDLH*NPVFHDLTPCG Trigger: GCCACATGGAGTCAAATCATGAAAGACAGGGTTCCAATGAAGATCTCTCTGCAGCTGCGCGGAGAAGACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | GGCAGATTTGAAGACCTCCATCTTCCTCCTCTACGTTaGTGGGCTCTTCCAAGGCAGAGTCTGCTTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GRFEDLHLPPLR*WALPRQSLLLH Trigger: GTGAAGAAGCAGACTCTGCCTTGGAAGAGCCCATCAACGTAGAGGAGGAAGATGGAGGTCTTCAAATCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | TTTGGCGAAGTTGATGACGCCCTTGAACATGTAGGTTaGCACATCGGCCAGGTGTGGCAGAAGAGGGATGAT | + |
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Preference number: 6 (lower is better) Translates to: FGEVDDALEHVG*HIGQVWQKRDD Trigger: ATCATCCCTCTTCTGCCACACCTGGCCGATGTGTCAACCTACATGTTCAAGGGCGTCATCAACTTCGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CCA 72 bp | CATGATCTTCAGGAACAGGAACCTGTGAGCAGGATATaGCCGACTACACTCAATGTAGGCCTTCAGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: HDLQEQEPVSRI*PTTLNVGLQGE Trigger: CTCACCCTGAAGGCCTACATTGAGTGTAGTCGGCCATATCCTGCTCACAGGTTCCTGTTCCTGAAGATCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 72 bp | CAGCCACTGTGGAACACTGCAGGCAGCCGGAAATCCTaGAAGTGGGAGAAAGTTGTGTCAAAGGTTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: QPLWNTAGSRKS*KWEKVVSKVCI Trigger: GATGCAAACCTTTGACACAACTTTCTCCCACTTCAAGGATTTCCGGCTGCCTGCAGTGTTCCACAGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | AGCCACTGTGGAACACTGCAGGCAGCCGGAAATCCTTaGAGTGGGAGAAAGTTGTGTCAAAGGTTTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SHCGTLQAAGNP*SGRKLCQRFAS Trigger: AGATGCAAACCTTTGACACAACTTTCTCCCACTTCAAGGATTTCCGGCTGCCTGCAGTGTTCCACAGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS CAA 72 bp | GAAATCCTTGAAGTGGGAGAAAGTTGTGTCAAAGGTTaGCATCTGAGCGTCCATCAGCTCCTGGATCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: EILEVGESCVKG*HLSVHQLLDQR Trigger: GCGCTGATCCAGGAGCTGATGGACGCTCAGATGCAAACCTTTGACACAACTTTCTCCCACTTCAAGGATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS TCA 72 bp | AGAGAGATCTTCATTGGAACCCTGTCTTTCATGATTTaGCTCCATGTGGCAGGGTCTTCCAACAGTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: REIFIGTLSFMI*LHVAGSSNSEA Trigger: GGCCTCACTGTTGGAAGACCCTGCCACATGGAGTCAAATCATGAAAGACAGGGTTCCAATGAAGATCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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| CDS GCA 72 bp | CATACTCCTCCTTATGCAGCTGTAGCTTCTTCAGCATaGAGTGGAATTTCATCAATGGATCCAACAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: HTPPYAAVASSA*SGISSMDPTEV Trigger: AACTTCTGTTGGATCCATTGATGAAATTCCACTGCATGCTGAAGAAGCTACAGCTGCATAAGGAGGAGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023504.5 |
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