Pregenerated sensors for NR1H5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048938Ensembl transcript IDs: ENSMUST00000058899.13, ENSMUST00000196135.2, ENSMUST00000196983.5, ENSMUST00000197412.5, ENSMUST00000198472.5
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGGTGTTTTAGGGCAAGGCAGAGGAAGGGAAATGTTAGGGGGATaGGAAGGGCATTGGCAGTGTGGGCATCACAGGGTGGGTGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SGVLGQGRGREMLGG*EGHWQCGHHRVGGK Trigger: TTTGCCACCCACCCTGTGATGCCCACACTGCCAATGCCCTTCTCATCCCCCTAACATTTCCCTTCCTCTGCCTTGCCCTAAAACACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CCA 90 bp | AGGGGGATGAGAAGGGCATTGGCAGTGTGGGCATCACAGGGTGGGTaGCAAATACGCCAGAAATATCTAATATATACACATGAAATTCCC | + |
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Preference number: 1 (lower is better) Translates to: RGMRRALAVWASQGG*QIRQKYLIYTHEIP Trigger: GGGAATTTCATGTGTATATATTAGATATTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAATGCCCTTCTCATCCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR GCA 90 bp | TCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATaGGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SQRITSPTWGPLFST*EGFQSGCDSEFSVQ Trigger: CTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR GCA 90 bp | CTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATaGTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: LRVLSSVSLPMRWAK*CGSSGWYIFENLNK Trigger: TTTGTTTAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR CCA 90 bp | ATTGACGAGATAGTCATACTCAAAGGAAATAAAACAGACTCAGACTaGAATCAAATGTTTTCTTGCAGATGGCCTAGTGGACCATCGTTG | + |
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Preference number: 1 (lower is better) Translates to: IDEIVILKGNKTDSD*NQMFSCRWPSGPSL Trigger: CAACGATGGTCCACTAGGCCATCTGCAAGAAAACATTTGATTCCAGTCTGAGTCTGTTTTATTTCCTTTGAGTATGACTATCTCGTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CAA 90 bp | GCAGATGGCCTAGTGGACCATCGTTGGGAGGAGAGGCCCTTGGTCTaGCAAAGATTATATACCCCAATACAGGGGAATACCAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ADGLVDHRWEERPLV*QRLYTPIQGNTRAR Trigger: CCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCTTTGCAAGACCAAGGGCCTCTCCTCCCAACGATGGTCCACTAGGCCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CAA 90 bp | AGGTCTCACTACATAGCCCAGGACTGCCTTAAACATGGGGTCCTCTaGTCTCTGTCTCTCAACTACAGAGCCTATGCCACCACATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RSHYIAQDCLKHGVL*SLSLNYRAYATTWL Trigger: GAGCCATGTGGTGGCATAGGCTCTGTAGTTGAGAGACAGAGACAAGAGGACCCCATGTTTAAGGCAGTCCTGGGCTATGTAGTGAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR TCA 90 bp | CCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGGGTTGGAGAGCGTTTTCTTGCACGTATaGATCTGGTGTTTTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PNTGEYQGQEAEVGGLESVFLHV*IWCFRA Trigger: TGCCCTAAAACACCAGATTCATACGTGCAAGAAAAC...GCTCTCCAACCCACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGAGGGCATTGGCAGTGTaGGCATCACAGGGTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: IARFTVAKIQNQTRCHQQRALAV*ASQGGW Trigger: CCACCCACCCTGTGATGCCCACACTGCCAATGCCCT...CTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR GCA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTATGAGGTGGGCGAAATaGTGTGGGTCTTCTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPMRWAK*CGSSGW Trigger: CCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR CAA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTaGTTTTCCACATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ADPISQRITSPTWGP*FSTCEGFQSGCDSE Trigger: CTCTGAGTCACAGCCACTCTGAAATCCTTCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCAAGGCATGGACGATCTaGGAAAAGCACTGTTGTCGC | + |
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Preference number: 2 (lower is better) Translates to: ADPISQRITSPTWGPLFSKAWTI*EKHCCR Trigger: GCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTT...GGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR-3UTR CCA 90 bp | CGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGGATGCCTATGCCACCACATaGCTCCATTTTTCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RFTVAKIQNQTRCHQQVDAYATT*LHFSFL Trigger: AAGGAAAGAAAAATGGAGCCATGTGGTGGCATAGGC...ATCCACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR GCA 90 bp | ATAGCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTTCTAAGCATTAGCTaGTACACCATCCATGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: IARFTVAKIQNQTRCHQQVLSIS*YTIHVS Trigger: GGACACATGGATGGTGTAGCAGCTAATGCTTAGAAC...CTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGATATTGACGAGATAGTCATACTCAAAGGAAATAAAACAGACTCAGACCTAGTGGACCATCGTTaGGAGGAGAGGCCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FADIDEIVILKGNKTDSDLVDHR*EERPLV Trigger: GACCAAGGGCCTCTCCTCCCAACGATGGTCCACTAG...GTCTGAGTCTGTTTTATTTCCTTTGAGTATGACTATCTCGTCAATATCTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCAGTGTGGGCATCACAGGGTGGGTGGCAAATACGCCAGAAATATCTAATCTCGTTAATCATTCATaGAGAAGAGGTTCTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: IGSVGITGWVANTPEISNLVNHS*RRGSKH Trigger: ATGCTTAGAACCTCTTCTTCATGAATGATTAACGAG...ATTAGATATTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR TCA 90 bp | GCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGGTCATTTGCAGATATTaGCGAGATAGTCATACTCAA | + |
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Preference number: 2 (lower is better) Translates to: ARFTVAKIQNQTRCHQQVVICRY*RDSHTQ Trigger: TTGAGTATGACTATCTCGTCAATATCTGCAAATGAC...CACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR GCA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTAACTTAAACAAAAGTTaGAGGACTGGTTCTTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPNLNKS*RTGSCR Trigger: CCTACAAGAACCAGTCCTGCAACTTTTGTTTAAGTT...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR-3UTR CCA 90 bp | AAAATGAGTGCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTGTGGGTCTTCTGGATaGTACATTTTTGAAAACTTA | + |
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Preference number: 2 (lower is better) Translates to: KMSADPISQRITSPTWGPCGSSG*YIFENL Trigger: TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACA...AGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGCACTCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR-3UTR TCA 90 bp | AACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACAACAACCATCCAATCTTGAGATaGATCCTGGAGTGTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: NLPVFTFTHYVFQLNNNNHPILR*ILECSS Trigger: AGATGAACACTCCAGGATTCATCTCAAGATTGGATG...GTTGTTGTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR CCA 90 bp | TATCCTAACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTATCTTTAGGTGAGGATTaGAGACATAATGATGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: YPNHNLPVFTFTHYVFQLSLGED*RHNDGH Trigger: ATGGCCATCATTATGTCTCCAATCCTCACCTAAAGA...TAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTTAGGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR TCA 72 bp | TTAGGGCAAGGCAGAGGAAGGGAAATGTTAGGGGGATaGGAAGGGCATTGGCAGTGTGGGCATCACAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: LGQGRGREMLGG*EGHWQCGHHRV Trigger: CACCCTGTGATGCCCACACTGCCAATGCCCTTCTCATCCCCCTAACATTTCCCTTCCTCTGCCTTGCCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CCA 72 bp | GGAAATGTTAGGGGGATGAGAAGGGCATTGGCAGTGTaGGCATCACAGGGTGGGTGGCAAATACGCCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GNVRGMRRALAV*ASQGGWQIRQK Trigger: TTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAATGCCCTTCTCATCCCCCTAACATTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR-3UTR CAA 90 bp | CTTGCAAAGATTATATACCCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGGGATGAGAAGGGCATaGGCAGTGTGGGCATCACAG | + |
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Preference number: 3 (lower is better) Translates to: LAKIIYPNTGEYQGQEAEGMRRA*AVWASQ Trigger: CTGTGATGCCCACACTGCCAATGCCCTTCTCATCCC...TTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCTTTGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CCA 72 bp | CTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTaGGCGAAATGCTGTGGGTCTTCTGGATGGTACATT | + |
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Preference number: 3 (lower is better) Translates to: LRVLSSVSLPMR*AKCCGSSGWYI Trigger: AATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR-3UTR CAA 90 bp | GCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGGAGAGGCCCTTGGTCTaGCAAAGATTATATACCCCA | + |
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Preference number: 3 (lower is better) Translates to: ARFTVAKIQNQTRCHQQVERPLV*QRLYTP Trigger: TGGGGTATATAATCTTTGCAAGACCAAGGGCCTCTC...CACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR GCA 72 bp | CTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATaGTGTGGGTCTTCTGGATGGTACATTTTTGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LSSVSLPMRWAK*CGSSGWYIFEN Trigger: GTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR GCA 72 bp | ATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATaGGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ITSPTWGPLFST*EGFQSGCDSEF Trigger: GAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR CCA 72 bp | GATGAGAAGGGCATTGGCAGTGTGGGCATCACAGGGTaGGTGGCAAATACGCCAGAAATATCTAATATATAC | + |
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Preference number: 3 (lower is better) Translates to: DEKGIGSVGITG*VANTPEISNIY Trigger: GTATATATTAGATATTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAATGCCCTTCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CCA 72 bp | AGAAGGGCATTGGCAGTGTGGGCATCACAGGGTGGGTaGCAAATACGCCAGAAATATCTAATATATACACAT | + |
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Preference number: 3 (lower is better) Translates to: RRALAVWASQGG*QIRQKYLIYTH Trigger: ATGTGTATATATTAGATATTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAATGCCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR CCA 72 bp | AAATGTTTTCTTGCAGATGGCCTAGTGGACCATCGTTaGGAGGAGAGGCCCTTGGTCTTGCAAAGATTATAT | + |
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Preference number: 3 (lower is better) Translates to: KCFLADGLVDHR*EERPLVLQRLY Trigger: ATATAATCTTTGCAAGACCAAGGGCCTCTCCTCCCAACGATGGTCCACTAGGCCATCTGCAAGAAAACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| 3UTR TCA 72 bp | TTCTATATGCTGCTTATTTTTAAGGCATGGACGATCTaGGAAAAGCACTGTTGTCGCCGTAAGCAGAGCATA | + |
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Preference number: 3 (lower is better) Translates to: FYMLLIFKAWTI*EKHCCRRKQSI Trigger: TATGCTCTGCTTACGGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATATAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | CCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGGGTTGGAGAGCGCCTCCACTGTACTGTaGATCCAAGCCATGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PNTGEYQGQEAEVGGLESASTVL*IQAMCV Trigger: AACACACATGGCTTGGATCCACAGTACAGTGGAGGC...GCTCTCCAACCCACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR TCA 90 bp | ACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGAGATCTGGTGCTGGATaGCACGTGTTTGGTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TQSSQFSKPPYEVGEMLWRSGAG*HVFGVC Trigger: GCAGACACCAAACACGTGTCATCCAGCACCAGATCT...CCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR GCA 90 bp | CCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGGGTTGGAGAGCAGTGACCACCGTTCTTaGAAGAATACACTGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: PNTGEYQGQEAEVGGLESSDHRS*KNTLHS Trigger: AGAATGCAGTGTATTCTTGCAAGAACGGTGGTCACT...GCTCTCCAACCCACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | CCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGGGTTGGAGAGCCTCTTCGACTTACACTaGATCTCTGTGAGCAAACAT | + |
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Preference number: 4 (lower is better) Translates to: PNTGEYQGQEAEVGGLESLFDLH*ISVSKH Trigger: ATGTTTGCTCACAGAGATCCAGTGTAAGTCGAAGAG...GCTCTCCAACCCACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR GCA 90 bp | ACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGAAGAACAAGTTGCTCTaGACCTTTGTGCCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TQSSQFSKPPYEVGEMLWKNKLL*TFVPQG Trigger: TCCCTGGGGCACAAAGGTGCAGAGCAACTTGTTCTT...CCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | AGATTATATACCCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGCCCCTTTCCCAGATCTaGTGCTGGATGACACGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RLYTPIQGNTRARKQKWVPLSQI*CWMTRV Trigger: AACACGTGTCATCCAGCACCAGATCTGGGAAAGGGG...CACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR GCA 90 bp | CTCTGTCTCTCAACTACAGAGCCTATGCCACCACATGGCTCCATTTTTCTTTCCATGAGGTGGGCGAAATaGTGTGGGTCTTCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LCLSTTEPMPPHGSIFLSMRWAK*CGSSGW Trigger: CCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT...GGAAAGAAAAATGGAGCCATGTGGTGGCATAGGCTCTGTAGTTGAGAGACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | CTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATTCAGTCTGCACTCTTaGCATTTTCTGCGCATGTAC | + |
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Preference number: 4 (lower is better) Translates to: LSSVSLPMRWAKCCGSSGFSLHS*HFLRMY Trigger: GTACATGCGCAGAAAATGCCAAGAGTGCAGACTGAA...TCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | TGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCGTAAGCCATCTTCCACTTGGATaGCAGGGTACAGGGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLFLRHGRSEKSTVVAVSHLPLG*QGTGQA Trigger: GGCCTGCCCTGTACCCTGCCATCCAAGTGGAAGATG...GCTTACGGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| 3UTR CAA 72 bp | CTAGTGGACCATCGTTGGGAGGAGAGGCCCTTGGTCTaGCAAAGATTATATACCCCAATACAGGGGAATACC | + |
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Preference number: 4 (lower is better) Translates to: LVDHRWEERPLV*QRLYTPIQGNT Trigger: GGTATTCCCCTGTATTGGGGTATATAATCTTTGCAAGACCAAGGGCCTCTCCTCCCAACGATGGTCCACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR TCA 90 bp | ACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGATGTCCATTTCACAGTaGCCACCGTTCTTGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TQSSQFSKPPYEVGEMLWMSISQ*PPFLQE Trigger: TTCTTGCAAGAACGGTGGTCACTGTGAAATGGACAT...CCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR TCA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCAGATCTGGTGCTGGATaGCACGTGTTTGGTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ADPISQRITSPTWGPLFSRSGAG*HVFGVC Trigger: GCAGACACCAAACACGTGTCATCCAGCACCAGATCT...GGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR TCA 90 bp | ACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGAAGGGTAGCCTTCCTTaGGAAAGTTTTCCGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TQSSQFSKPPYEVGEMLWKGSLP*ESFPEN Trigger: ATTCTCCGGAAAACTTTCTCAAGGAAGGCTACCCTT...CCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGGAACAACCACATAAGTaGACTGACCAGATTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQSSQFSKPPYEVGEMLWEQPHK*TDQILE Trigger: CTCGAGAATCTGGTCAGTCCACTTATGTGGTTGTTC...CCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | ATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCCATCTTCCACTTGGATaGCAGGGTACAGGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICCLFLRHGRSEKSTVVAHLPLG*QGTGQA Trigger: GGCCTGCCCTGTACCCTGCCATCCAAGTGGAAGATG...GGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACCGAGTCCACACCAACTaGCTCCACTGTACTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHFSENNITNLGSFVFHRVHTN*LHCTVD Trigger: ATCCACAGTACAGTGGAGGCAGTTGGTGTGGACTCG...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCGTAAGCCGAGTCCACACCAACTaGCTCCACTGTACTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLRHGRSEKSTVVAVSRVHTN*LHCTVD Trigger: ATCCACAGTACAGTGGAGGCAGTTGGTGTGGACTCG...GCTTACGGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCTGCTCTGCACCTTTGTaGCCCAGGGAATTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ADPISQRITSPTWGPLFSCSAPL*PREFIF Trigger: GAAGATGAATTCCCTGGGGCACAAAGGTGCAGAGCA...GGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGCTTGCAAGAATACACTaGATTCTTGGTAATGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: QFSKPPYEVGEMLWVFWMLARIH*ILGNAT Trigger: CGTAGCATTACCAAGAATGCAGTGTATTCTTGCAAG...CATCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | ATAGCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGCCTTCATCTTCCACTTaGATGGCAGGGTACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IARFTVAKIQNQTRCHQQPSSST*MAGYRA Trigger: TGCCCTGTACCCTGCCATCCAAGTGGAAGATGAAGG...CTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | AAAATGAGTGCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTCCTTCATCTTCCACTTaGATGGCAGGGTACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KMSADPISQRITSPTWGPPSSST*MAGYRA Trigger: TGCCCTGTACCCTGCCATCCAAGTGGAAGATGAAGG...AGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGCACTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | TGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCGTAAGCCCCCTTTCCCAGATCTaGTGCTGGATGACACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLRHGRSEKSTVVAVSPLSQI*CWMTRV Trigger: AACACGTGTCATCCAGCACCAGATCTGGGAAAGGGG...GCTTACGGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | AGATTATATACCCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGATTAGCCCTTGTATGTaGAGGACTGATACCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLYTPIQGNTRARKQKWVISPCM*RTDTSE Trigger: CTCAGAGGTATCAGTCCTCCACATACAAGGGCTAAT...CACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR TCA 90 bp | ATAGCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGAGAGTCATGTTGTCCTaGACCCCTTTCCCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IARFTVAKIQNQTRCHQQRVMLS*TPFPDL Trigger: CAGATCTGGGAAAGGGGTTCAGGACAACATGACTCT...CTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR TCA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTAAGGGTAGCCTTCCTTaGGAAAGTTTTCCGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPKGSLP*ESFPEN Trigger: ATTCTCCGGAAAACTTTCTCAAGGAAGGCTACCCTT...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTACCCCTTTCCCAGATCTaGTGCTGGATGACACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLPLSQI*CWMTRV Trigger: AACACGTGTCATCCAGCACCAGATCTGGGAAAGGGG...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTAAGAGTCATGTTGTCCTaGACCCCTTTCCCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLRVMLS*TPFPDL Trigger: CAGATCTGGGAAAGGGGTTCAGGACAACATGACTCT...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | CGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGGATAAGGGTAGCCTTCCTTaGGAAAGTTTTCCGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RFTVAKIQNQTRCHQQVDKGSLP*ESFPEN Trigger: ATTCTCCGGAAAACTTTCTCAAGGAAGGCTACCCTT...ATCCACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR GCA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTAGTGACCACCGTTCTTaGAAGAATACACTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPSDHRS*KNTLHS Trigger: AGAATGCAGTGTATTCTTGCAAGAACGGTGGTCACT...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTTACACTTCTTCAGTCTaGACTCTTGGCATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPYTSSV*TLGIFC Trigger: GCAGAAAATGCCAAGAGTGCAGACTGAAGAAGTGTA...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR GCA 90 bp | CATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATGCGACACGTGTTTGGTGTCTaGTCCTTCATCTTCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFSENNITNLGSFVFHMRHVFGV*SFIFHL Trigger: CAAGTGGAAGATGAAGGAGCAGACACCAAACACGTG...TCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR GCA 90 bp | TGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCGTAAGCCCTCCTGCAGAAGTTTaGTTGTTTCTCCCAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLFLRHGRSEKSTVVAVSPPAEV*LFLPRE Trigger: TTCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGG...GCTTACGGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | CTTGCAAAGATTATATACCCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAACCTTTGTTTTCCACATaGGAAGGATTTCAGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAKIIYPNTGEYQGQEAEPLFST*EGFQSG Trigger: GCCACTCTGAAATCCTTCGCATGTGGAAAACAAAGG...TTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCTTTGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTAGCCTCCACTGTACTGTaGATCCAAGCCATGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLASTVL*IQAMCV Trigger: AACACACATGGCTTGGATCCACAGTACAGTGGAGGC...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCATTAGCCCTTGTATGTaGAGGACTGATACCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADPISQRITSPTWGPLFSISPCM*RTDTSE Trigger: CTCAGAGGTATCAGTCCTCCACATACAAGGGCTAAT...GGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | ATAGCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGATGTCCATTTCACAGTaGCCACCGTTCTTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IARFTVAKIQNQTRCHQQMSISQ*PPFLQE Trigger: TTCTTGCAAGAACGGTGGTCACTGTGAAATGGACAT...CTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR TCA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATGTCCATTTCACAGTaGCCACCGTTCTTGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHFSENNITNLGSFVFHMSISQ*PPFLQE Trigger: TTCTTGCAAGAACGGTGGTCACTGTGAAATGGACAT...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTTGCACGTATGAATCTGGTGTTTTAGGGCAAGGCAGAGGAAGGGAAATGAGTACTTCCAGAGGTTaGGTCTTTCCCACCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSCTYESGVLGQGRGREMSTSRG*VFPTIK Trigger: CTTTATGGTGGGAAAGACTCAACCTCTGGAAGTACT...CATTTCCCTTCCTCTGCCTTGCCCTAAAACACCAGATTCATACGTGCAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR TCA 90 bp | CGATCTGAGAAAAGCACTGTTGTCGCCGTAAGCAGAGCATATTCAGTATCCGATAAGTTTTCCGGAGAATaGACACTTTCATCAGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSEKSTVVAVSRAYSVSDKFSGE*TLSSAL Trigger: TAGCGCTGATGAAAGTGTTCATTCTCCGGAAAACTT...ATCGGATACTGAATATGCTCTGCTTACGGCGACAACAGTGCTTTTCTCAGATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR GCA 90 bp | ATTGGCAGTGTGGGCATCACAGGGTGGGTGGCAAATACGCCAGAAATATCTAATCTTGCAAGAATACACTaGATTCTTGGTAATGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: IGSVGITGWVANTPEISNLARIH*ILGNAT Trigger: CGTAGCATTACCAAGAATGCAGTGTATTCTTGCAAG...ATTAGATATTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR GCA 90 bp | CGATCTGAGAAAAGCACTGTTGTCGCCGTAAGCAGAGCATATTCAGTATCCGATTACACTTCTTCAGTCTaGACTCTTGGCATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSEKSTVVAVSRAYSVSDYTSSV*TLGIFC Trigger: GCAGAAAATGCCAAGAGTGCAGACTGAAGAAGTGTA...ATCGGATACTGAATATGCTCTGCTTACGGCGACAACAGTGCTTTTCTCAGATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR GCA 90 bp | ATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCCACGTGTTTGGTGTCTaGTCCTTCATCTTCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICCLFLRHGRSEKSTVVAHVFGV*SFIFHL Trigger: CAAGTGGAAGATGAAGGAGCAGACACCAAACACGTG...GGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | CATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATGCGAGAACAACCACATAAGTaGACTGACCAGATTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HFSENNITNLGSFVFHMREQPHK*TDQILE Trigger: CTCGAGAATCTGGTCAGTCCACTTATGTGGTTGTTC...TCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CCA 90 bp | TATCCTAACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTACATCTTCCACTTGGATaGCAGGGTACAGGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPNHNLPVFTFTHYVFQLHLPLG*QGTGQA Trigger: GGCCTGCCCTGTACCCTGCCATCCAAGTGGAAGATG...TAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTTAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCGGTGAACAGTCACTATaGTATTCAGAAGCCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ADPISQRITSPTWGPLFSGEQSL*YSEADV Trigger: AACATCGGCTTCTGAATACCATAGTGACTGTTCACC...GGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATTAGCCCTTGTATGTaGAGGACTGATACCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHFSENNITNLGSFVFHISPCM*RTDTSE Trigger: CTCAGAGGTATCAGTCCTCCACATACAAGGGCTAAT...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| 3UTR CAA 72 bp | ATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTaGTTTTCCACATGCGAAGGATTTCAGAGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISQRITSPTWGP*FSTCEGFQSGC Trigger: ACAGCCACTCTGAAATCCTTCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | TCTATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCAGAGTCATGTTGTCCTaGACCCCTTTCCCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SICCLFLRHGRSEKSTVVRVMLS*TPFPDL Trigger: CAGATCTGGGAAAGGGGTTCAGGACAACATGACTCT...GACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | CGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGGATTCAGTATCCGATACATaGAGTTCACTCATTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFTVAKIQNQTRCHQQVDSVSDT*SSLILL Trigger: CAGAAGAATGAGTGAACTTCATGTATCGGATACTGA...ATCCACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | TCTATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCAAGAACAAGTTGCTCTaGACCTTTGTGCCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SICCLFLRHGRSEKSTVVKNKLL*TFVPQG Trigger: TCCCTGGGGCACAAAGGTGCAGAGCAACTTGTTCTT...GACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | ATTGGCAGTGTGGGCATCACAGGGTGGGTGGCAAATACGCCAGAAATATCTAATAACTTAAACAAAAGTTaGAGGACTGGTTCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGSVGITGWVANTPEISNNLNKS*RTGSCR Trigger: CCTACAAGAACCAGTCCTGCAACTTTTGTTTAAGTT...ATTAGATATTTCTGGCGTATTTGCCACCCACCCTGTGATGCCCACACTGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTATTCAGTCTGCACTCTTaGCATTTTCTGCGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLFSLHS*HFLRMY Trigger: GTACATGCGCAGAAAATGCCAAGAGTGCAGACTGAA...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACCTCTTCGACTTACACTaGATCTCTGTGAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHFSENNITNLGSFVFHLFDLH*ISVSKH Trigger: ATGTTTGCTCACAGAGATCCAGTGTAAGTCGAAGAG...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | AGATTATATACCCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGTGTGGGTCTTCTGGATaGTACATTTTTGAAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLYTPIQGNTRARKQKWVCGSSG*YIFENL Trigger: TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACA...CACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR TCA 90 bp | CATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATGCGACCAAGCCATGTGTGTTaGAATGACTTTGTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HFSENNITNLGSFVFHMRPSHVC*NDFVKM Trigger: CATCTTTACAAAGTCATTTCAACACACATGGCTTGG...TCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACCCAAGCCATGTGTGTTaGAATGACTTTGTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSHFSENNITNLGSFVFHPSHVC*NDFVKM Trigger: CATCTTTACAAAGTCATTTCAACACACATGGCTTGG...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGATATTGACGAGATAGTCATACTCAAAGGAAATAAAACAGACTCAGACAGATCTGGTGCTGGATaGCACGTGTTTGGTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FADIDEIVILKGNKTDSDRSGAG*HVFGVC Trigger: GCAGACACCAAACACGTGTCATCCAGCACCAGATCT...GTCTGAGTCTGTTTTATTTCCTTTGAGTATGACTATCTCGTCAATATCTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTAAAGTTTTCCGGAGAATaGACACTTTCATCAGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLKFSGE*TLSSAL Trigger: TAGCGCTGATGAAAGTGTTCATTCTCCGGAAAACTT...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | AAGCAGATACAATTTGAAAAGGCTTGTTCCTCGTTAATCATTCATGAAGAAGAGCGAGTCCACACCAACTaGCTCCACTGTACTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQIQFEKACSSLIIHEEERVHTN*LHCTVD Trigger: ATCCACAGTACAGTGGAGGCAGTTGGTGTGGACTCG...CTCTTCTTCATGAATGATTAACGAGGAACAAGCCTTTTCAAATTGTATCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | ATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCAGTGACCACCGTTCTTaGAAGAATACACTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICCLFLRHGRSEKSTVVASDHRS*KNTLHS Trigger: AGAATGCAGTGTATTCTTGCAAGAACGGTGGTCACT...GGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | AAAATGAGTGCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTACTCTTGGCATTTTCTaGGCATGTACATGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KMSADPISQRITSPTWGPTLGIF*ACTCPF Trigger: AAATGGACATGTACATGCGCAGAAAATGCCAAGAGT...AGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGCACTCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR GCA 90 bp | TCTATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCCCTCCTGCAGAAGTTTaGTTGTTTCTCCCAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SICCLFLRHGRSEKSTVVPPAEV*LFLPRE Trigger: TTCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGG...GACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | ATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCGGTGAACAGTCACTATaGTATTCAGAAGCCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ICCLFLRHGRSEKSTVVAGEQSL*YSEADV Trigger: AACATCGGCTTCTGAATACCATAGTGACTGTTCACC...GGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTACTCCCAAGGGAATCATaGATTTTTGGTGAACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLLPRES*IFGEQS Trigger: TGACTGTTCACCAAAAATCCATGATTCCCTTGGGAG...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | ATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCCTCCCAAGGGAATCATaGATTTTTGGTGAACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICCLFLRHGRSEKSTVVALPRES*IFGEQS Trigger: TGACTGTTCACCAAAAATCCATGATTCCCTTGGGAG...GGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | TCTATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCATTGTAGTGATATCCTaGTGCCTTATCACCGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SICCLFLRHGRSEKSTVVIVVIS*CLITAD Trigger: GTCTGCGGTGATAAGGCATCAGGATATCACTACAAT...GACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | TCTATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCAGTACTTCCAGAGGTTaGGTCTTTCCCACCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SICCLFLRHGRSEKSTVVSTSRG*VFPTIK Trigger: CTTTATGGTGGGAAAGACTCAACCTCTGGAAGTACT...GACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197412.5 |
||
| CDS-3UTR TCA 90 bp | AACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACAACAACAAGGCATGGACGATCTaGGAAAAGCACTGTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPVFTFTHYVFQLNNNNKAWTI*EKHCCR Trigger: GCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTT...GTTGTTGTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | AACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACTGCTCTGCACCTTTGTaGCCCAGGGAATTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHNLPVFTFTHYVFQLNNCSAPL*PREFIF Trigger: GAAGATGAATTCCCTGGGGCACAAAGGTGCAGAGCA...GTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | AACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACAACAACAAGAACAAGTTGCTCTaGACCTTTGTGCCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLPVFTFTHYVFQLNNNNKNKLL*TFVPQG Trigger: TCCCTGGGGCACAAAGGTGCAGAGCAACTTGTTCTT...GTTGTTGTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGGTACATTTTTGAAAACTTAACTCTTGGCATTTTCTaGGCATGTACATGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MRWAKCCGSSGWYIFENLTLGIF*ACTCPF Trigger: AAATGGACATGTACATGCGCAGAAAATGCCAAGAGT...TAAGTTTTCAAAAATGTACCATCCAGAAGACCCACAGCATTTCGCCCACCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | AACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACGTGGGCGAAATGCTGTaGGTCTTCTGGATGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NHNLPVFTFTHYVFQLNNVGEML*VFWMVH Trigger: ATGTACCATCCAGAAGACCCACAGCATTTCGCCCAC...GTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTTAAGAGGAATGAAATTATGTCATTTGCAGATATTGACGAGATAGTCCACGTGTTTGGTGTCTaGTCCTTCATCTTCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SILKRNEIMSFADIDEIVHVFGV*SFIFHL Trigger: CAAGTGGAAGATGAAGGAGCAGACACCAAACACGTG...GACTATCTCGTCAATATCTGCAAATGACATAATTTCATTCCTCTTAAGGATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR GCA 90 bp | AACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACCCTCCTGCAGAAGTTTaGTTGTTTCTCCCAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHNLPVFTFTHYVFQLNNPPAEV*LFLPRE Trigger: TTCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGG...GTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATATTGACAATAGGGTaGTTCTTGGAAATCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RSHFSENNITNLGSFVFHILTIG*FLEICI Trigger: GATACAGATTTCCAAGAACCACCCTATTGTCAATAT...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR TCA 90 bp | AACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACATTGTAGTGATATCCTaGTGCCTTATCACCGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NHNLPVFTFTHYVFQLNNIVVIS*CLITAD Trigger: GTCTGCGGTGATAAGGCATCAGGATATCACTACAAT...GTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | ATATGCTGCTTATTTTTAAGGCATGGACGATCTGAGAAAAGCACTGTTGTCGCCATATTGACAATAGGGTaGTTCTTGGAAATCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: ICCLFLRHGRSEKSTVVAILTIG*FLEICI Trigger: GATACAGATTTCCAAGAACCACCCTATTGTCAATAT...GGCGACAACAGTGCTTTTCTCAGATCGTCCATGCCTTAAAAATAAGCAGCATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CCA 90 bp | AACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACGAACAACCACATAAGTaGACTGACCAGATTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NHNLPVFTFTHYVFQLNNEQPHK*TDQILE Trigger: CTCGAGAATCTGGTCAGTCCACTTATGTGGTTGTTC...GTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | AACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAACAACAACAACTTCAGTCTGCACTCTTaGCATTTTCTGCGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NLPVFTFTHYVFQLNNNNFSLHS*HFLRMY Trigger: GTACATGCGCAGAAAATGCCAAGAGTGCAGACTGAA...GTTGTTGTTGTTTAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR TCA 90 bp | TATCCTAACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAAAGTTTTCCGGAGAATaGACACTTTCATCAGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YPNHNLPVFTFTHYVFQLKFSGE*TLSSAL Trigger: TAGCGCTGATGAAAGTGTTCATTCTCCGGAAAACTT...TAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTTAGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR GCA 90 bp | TCCATCCTTAAGAGGAATGAAATTATGTCATTTGCAGATATTGACGAGATAGTCTACACTTCTTCAGTCTaGACTCTTGGCATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SILKRNEIMSFADIDEIVYTSSV*TLGIFC Trigger: GCAGAAAATGCCAAGAGTGCAGACTGAAGAAGTGTA...GACTATCTCGTCAATATCTGCAAATGACATAATTTCATTCCTCTTAAGGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | TATCCTAACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAGGTGAACAGTCACTATaGTATTCAGAAGCCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YPNHNLPVFTFTHYVFQLGEQSL*YSEADV Trigger: AACATCGGCTTCTGAATACCATAGTGACTGTTCACC...TAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTTAGGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | TCCATCCTTAAGAGGAATGAAATTATGTCATTTGCAGATATTGACGAGATAGTCCTCCCAAGGGAATCATaGATTTTTGGTGAACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SILKRNEIMSFADIDEIVLPRES*IFGEQS Trigger: TGACTGTTCACCAAAAATCCATGATTCCCTTGGGAG...GACTATCTCGTCAATATCTGCAAATGACATAATTTCATTCCTCTTAAGGATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CCA 90 bp | AAGCAGATACAATTTGAAAAGGCTTGTTCCTCGTTAATCATTCATGAAGAAGAGATAACATCACCAACCTaGGGTCCTTTGTTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KQIQFEKACSSLIIHEEEITSPT*GPLFST Trigger: TGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTAT...CTCTTCTTCATGAATGATTAACGAGGAACAAGCCTTTTCAAATTGTATCTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR TCA 90 bp | TATCCTAACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTACCAAGCCATGTGTGTTaGAATGACTTTGTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: YPNHNLPVFTFTHYVFQLPSHVC*NDFVKM Trigger: CATCTTTACAAAGTCATTTCAACACACATGGCTTGG...TAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTTAGGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR GCA 90 bp | AAGCAGATACAATTTGAAAAGGCTTGTTCCTCGTTAATCATTCATGAAGAAGAGACTCTTGGCATTTTCTaGGCATGTACATGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KQIQFEKACSSLIIHEEETLGIF*ACTCPF Trigger: AAATGGACATGTACATGCGCAGAAAATGCCAAGAGT...CTCTTCTTCATGAATGATTAACGAGGAACAAGCCTTTTCAAATTGTATCTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR CCA 90 bp | TATCCTAACCATAACCTACCTGTGTTCACATTTACACATTATGTGTTTCAGCTAATATTGACAATAGGGTaGTTCTTGGAAATCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: YPNHNLPVFTFTHYVFQLILTIG*FLEICI Trigger: GATACAGATTTCCAAGAACCACCCTATTGTCAATAT...TAGCTGAAACACATAATGTGTAAATGTGAACACAGGTAGGTTATGGTTAGGATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CAA 90 bp | CCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGGGTTGGAGAGCAAACTTAGTTCGGGGTaGGAACCCTCCTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PNTGEYQGQEAEVGGLESKLSSG*EPSCRS Trigger: ACTTCTGCAGGAGGGTTCCAACCCCGAACTAAGTTT...GCTCTCCAACCCACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS GCA 90 bp | GCTCCTTCATCTTCCACTTGGATGGCAGGGTACAGGGCAGGCCCGTaGTTGAAGTTCTTGCGAAGTCTCTTCGACTTACACTGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APSSSTWMAGYRAGP*LKFLRSLFDLHWIS Trigger: AGAGATCCAGTGTAAGTCGAAGAGACTTCGCAAGAACTTCAAGCACGGGCCTGCCCTGTACCCTGCCATCCAAGTGGAAGATGAAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS CCA 90 bp | GTGCCCCAGGGAATTCATCTTCATCATCGTGAACAACCACATAAGTaGACTGACCAGATTCTCGAGCGTCGAGTCCACACCAACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPQGIHLHHREQPHK*TDQILERRVHTNCL Trigger: GAGGCAGTTGGTGTGGACTCGACGCTCGAGAATCTGGTCAGTCCACTTATGTGGTTGTTCACGATGATGAAGATGAATTCCCTGGGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058899.13 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS CCA 90 bp | GCAGGCCCGTGCTTGAAGTTCTTGCGAAGTCTCTTCGACTTACACTaGATCTCTGTGAGCAAACATTCTGCCAACATCCCCACCGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AGPCLKFLRSLFDLH*ISVSKHSANIPTAL Trigger: TAAGGCGGTGGGGATGTTGGCAGAATGTTTGCTCACAGAGATCCAGTGTAAGTCGAAGAGACTTCGCAAGAACTTCAAGCACGGGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | ACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGCCCTCCTGCAGAAGTTaGCTTGTTTCTCCCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQSSQFSKPPYEVGEMLWPSCRS*LVSPKG Trigger: TCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGGG...CCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGAAAACTTAGTTCGGGGTaGGAACCCTCCTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSVSLPMRWAKCCGSSGKLSSG*EPSCRS Trigger: ACTTCTGCAGGAGGGTTCCAACCCCGAACTAAGTTT...TCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGATGAAACTTAGTTCGGGGTaGGAACCCTCCTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QFSKPPYEVGEMLWVFWMKLSSG*EPSCRS Trigger: ACTTCTGCAGGAGGGTTCCAACCCCGAACTAAGTTT...CATCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS TCA 90 bp | TATCCTGATGCCTTATCACCGCAGACCATGCAGAGCATGTCATCTTaGCCCTTCCAGCGTAAAGAACAAGTTGCTCTGCACCTTTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YPDALSPQTMQSMSS*PFQRKEQVALHLCA Trigger: GGCACAAAGGTGCAGAGCAACTTGTTCTTTACGCTGGAAGGGTCAAGATGACATGCTCTGCATGGTCTGCGGTGATAAGGCATCAGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058899.13 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | AGATTATATACCCCAATACAGGGGAATACCAGGGCCAGGAAGCAGAAGTGGGTGCTGGATGACACGTGTTaGGTGTCTGCTCCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RLYTPIQGNTRARKQKWVLDDTC*VSAPSS Trigger: AGATGAAGGAGCAGACACCAAACACGTGTCATCCAG...CACCCACTTCTGCTTCCTGGCCCTGGTATTCCCCTGTATTGGGGTATATAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR CAA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTCCCTCCTGCAGAAGTTaGCTTGTTTCTCCCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPPSCRS*LVSPKG Trigger: TCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGGG...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTCAGTAAGCCTCCCTATGAGGTGGGCGAAATGCTGTGGGTCTTCTGGAACAATAGGGTGGTTCTaGGAAATCTGTATCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSVSLPMRWAKCCGSSGTIGWF*EICITQ Trigger: CTGTGTGATACAGATTTCCAAGAACCACCCTATTGT...TCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | GCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGAGCGTAAAGAACAAGTaGCTCTGCACCTTTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARFTVAKIQNQTRCHQQVSVKNK*LCTFVP Trigger: GGGCACAAAGGTGCAGAGCAACTTGTTCTTTACGCT...CACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
||
| CDS-3UTR CAA 90 bp | GCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCCGCCGGAAAAAGCCTTaGCACCCCTCACAAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ADPISQRITSPTWGPLFSRRKKP*HPSQVS Trigger: ACTTACTTGTGAGGGGTGCAAAGGCTTTTTCCGGCG...GGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS-3UTR CAA 90 bp | CATGCGAAGGATTTCAGAGTGGCTGTGACTCAGAGTTCTCAGTTCAGTAAGCCTCTGGATGACACGTGTTaGGTGTCTGCTCCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HAKDFRVAVTQSSQFSKPLDDTC*VSAPSS Trigger: AGATGAAGGAGCAGACACCAAACACGTGTCATCCAG...AGGCTTACTGAACTGAGAACTCTGAGTCACAGCCACTCTGAAATCCTTCGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
||
| CDS TCA 90 bp | CACACCAACTGCCTCCACTGTACTGTGGATCCAAGCCATGTGTGTTaGAATGACTTTGTAAAGATGGGGACTGTAACGCTGGAGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: HTNCLHCTVDPSHVC*NDFVKMGTVTLEET Trigger: AGTTTCCTCCAGCGTTACAGTCCCCATCTTTACAAAGTCATTTCAACACACATGGCTTGGATCCACAGTACAGTGGAGGCAGTTGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACAGCGTAAAGAACAAGTaGCTCTGCACCTTTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RSHFSENNITNLGSFVFHSVKNK*LCTFVP Trigger: GGGCACAAAGGTGCAGAGCAACTTGTTCTTTACGCT...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | GCACGATTCACAGTGGCCAAGATACAGAATCAAACTAGGTGTCATCAGCAGGTGACATCACTTCAGTTTTaGACGCCTTCTGTAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: ARFTVAKIQNQTRCHQQVTSLQF*TPSVMQ Trigger: CTGCATTACAGAAGGCGTCAAAAACTGAAGTGATGT...CACCTGCTGATGACACCTAGTTTGATTCTGTATCTTGGCCACTGTGAATCGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS CCA 90 bp | TGGAACCCTCCTGCAGAAGTTTGCTTGTTTCTCCCAAGGGAATCATaGATTTTTGGTGAACAGTCACTATGGTATTCAGAAGCCGATGTT | + |
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Preference number: 5 (lower is better) Translates to: WNPPAEVCLFLPRES*IFGEQSLWYSEADV Trigger: AACATCGGCTTCTGAATACCATAGTGACTGTTCACCAAAAATCCATGATTCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGGGTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | AAAATGAGTGCAGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTACAATAGGGTGGTTCTaGGAAATCTGTATCACACAG | + |
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Preference number: 5 (lower is better) Translates to: KMSADPISQRITSPTWGPTIGWF*EICITQ Trigger: CTGTGTGATACAGATTTCCAAGAACCACCCTATTGT...AGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCTGCACTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | CATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACATGCGAACATCACTTCAGTTTTaGACGCCTTCTGTAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: HFSENNITNLGSFVFHMRTSLQF*TPSVMQ Trigger: CTGCATTACAGAAGGCGTCAAAAACTGAAGTGATGT...TCGCATGTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | AGATCCCATTTCTCAGAGAATAACATCACCAACCTGGGGTCCTTTGTTTTCCACACATCACTTCAGTTTTaGACGCCTTCTGTAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: RSHFSENNITNLGSFVFHTSLQF*TPSVMQ Trigger: CTGCATTACAGAAGGCGTCAAAAACTGAAGTGATGT...GTGGAAAACAAAGGACCCCAGGTTGGTGATGTTATTCTCTGAGAAATGGGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | AAGCAGATACAATTTGAAAAGGCTTGTTCCTCGTTAATCATTCATGAAGAAGAGCGCCGGAAAAAGCCTTaGCACCCCTCACAAGTAAGT | + |
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Preference number: 5 (lower is better) Translates to: KQIQFEKACSSLIIHEEERRKKP*HPSQVS Trigger: ACTTACTTGTGAGGGGTGCAAAGGCTTTTTCCGGCG...CTCTTCTTCATGAATGATTAACGAGGAACAAGCCTTTTCAAATTGTATCTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS-3UTR CAA 90 bp | TCCATCCTTAAGAGGAATGAAATTATGTCATTTGCAGATATTGACGAGATAGTCCCCTCCTGCAGAAGTTaGCTTGTTTCTCCCAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SILKRNEIMSFADIDEIVPSCRS*LVSPKG Trigger: TCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGGG...GACTATCTCGTCAATATCTGCAAATGACATAATTTCATTCCTCTTAAGGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS CCA 90 bp | TGGTTCTTGGAAATCTGTATCACACAGCTGATAATGGAATTGTTCTaGCAAAATATCATAATACTGTGTGGGTTCAGCGAGGTAGTACCC | + |
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Preference number: 5 (lower is better) Translates to: WFLEICITQLIMELF*QNIIILCGFSEVVP Trigger: GGGTACTACCTCGCTGAACCCACACAGTATTATGATATTTTGCCAGAACAATTCCATTATCAGCTGTGTGATACAGATTTCCAAGAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS-3UTR CAA 90 bp | TCCATCCTTAAGAGGAATGAAATTATGTCATTTGCAGATATTGACGAGATAGTCACAATAGGGTGGTTCTaGGAAATCTGTATCACACAG | + |
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Preference number: 5 (lower is better) Translates to: SILKRNEIMSFADIDEIVTIGWF*EICITQ Trigger: CTGTGTGATACAGATTTCCAAGAACCACCCTATTGT...GACTATCTCGTCAATATCTGCAAATGACATAATTTCATTCCTCTTAAGGATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058899.13 |
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| CDS GCA 72 bp | ACTGACCAGATTCTCGAGCGTCGAGTCCACACCAACTaGCTCCACTGTACTGTGGATCCAAGCCATGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TDQILERRVHTN*LHCTVDPSHVC Trigger: ACACACATGGCTTGGATCCACAGTACAGTGGAGGCAGTTGGTGTGGACTCGACGCTCGAGAATCTGGTCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058899.13 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 72 bp | ATGGCAGGGTACAGGGCAGGCCCGTGCTTGAAGTTCTaGCGAAGTCTCTTCGACTTACACTGGATCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: MAGYRAGPCLKF*RSLFDLHWISV Trigger: CACAGAGATCCAGTGTAAGTCGAAGAGACTTCGCAAGAACTTCAAGCACGGGCCTGCCCTGTACCCTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS GCA 72 bp | AAAAGCCAGATTCTCGAGCGTCGAGTCCACACCAACTaGCTCCACTGTACTGTGGATCCAAGCCATGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KSQILERRVHTN*LHCTVDPSHVC Trigger: ACACACATGGCTTGGATCCACAGTACAGTGGAGGCAGTTGGTGTGGACTCGACGCTCGAGAATCTGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196135.2 |
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| CDS CAA 72 bp | ACCCCTTTCCCAGATCTGGTGCTGGATGACACGTGTTaGGTGTCTGCTCCTTCATCTTCCACTTGGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: TPFPDLVLDDTC*VSAPSSSTWMA Trigger: TGCCATCCAAGTGGAAGATGAAGGAGCAGACACCAAACACGTGTCATCCAGCACCAGATCTGGGAAAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS TCA 72 bp | GCCTTATCACCGCAGACCATGCAGAGCATGTCATCTTaGCCCTTCCAGCGTAAAGAACAAGTTGCTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: ALSPQTMQSMSS*PFQRKEQVALH Trigger: GTGCAGAGCAACTTGTTCTTTACGCTGGAAGGGTCAAGATGACATGCTCTGCATGGTCTGCGGTGATAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058899.13 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS GCA 72 bp | GAGTCATGTTGTCCTGAACCCCTTTCCCAGATCTGGTaGTGGATGACACGTGTTTGGTGTCTGCTCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: ESCCPEPLSQIW*WMTRVWCLLLH Trigger: ATGAAGGAGCAGACACCAAACACGTGTCATCCAGCACCAGATCTGGGAAAGGGGTTCAGGACAACATGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS TCA 72 bp | TCTTGCGAAGTCTCTTCGACTTACACTGGATCTCTGTaGGCAAACATTCTGCCAACATCCCCACCGCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: SCEVSSTYTGSL*ANILPTSPPPY Trigger: GTAAGGCGGTGGGGATGTTGGCAGAATGTTTGCTCACAGAGATCCAGTGTAAGTCGAAGAGACTTCGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 90 bp | TGGAGGACTGATACCTCTGAGAGTCTCAGAAAACTTAGTTCGGGGTaGGAACCCTCCTGCAGAAGTTTGCTTGTTTCTCCCAAGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: WRTDTSESLRKLSSG*EPSCRSLLVSPKGI Trigger: GATTCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGGGTTCCAACCCCGAACTAAGTTTTCTGAGACTCTCAGAGGTATCAGTCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS GCA 72 bp | CTTCGACTTACACTGGATCTCTGTGAGCAAACATTCTaGCAACATCCCCACCGCCTTACACTTCTTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LRLTLDLCEQTF*QHPHRLTLLQS Trigger: AGACTGAAGAAGTGTAAGGCGGTGGGGATGTTGGCAGAATGTTTGCTCACAGAGATCCAGTGTAAGTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 72 bp | GATACCTCTGAGAGTCTCAGAAAACTTAGTTCGGGGTaGGAACCCTCCTGCAGAAGTTTGCTTGTTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: DTSESLRKLSSG*EPSCRSLLVSP Trigger: GGGAGAAACAAGCAAACTTCTGCAGGAGGGTTCCAACCCCGAACTAAGTTTTCTGAGACTCTCAGAGGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS GCA 72 bp | CATCTTGACCCTTCCAGCGTAAAGAACAAGTTGCTCTaGACCTTTGTGCCCCAGGGAATTCATCTTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: HLDPSSVKNKLL*TFVPQGIHLHH Trigger: ATGATGAAGATGAATTCCCTGGGGCACAAAGGTGCAGAGCAACTTGTTCTTTACGCTGGAAGGGTCAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058899.13 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 72 bp | AAAGCTGGGCTACATGAAGGAACATCACTTCAGTTTTaGACGCCTTCTGTAATGCAGCCTGATCCTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: KAGLHEGTSLQF*TPSVMQPDPQW Trigger: CCACTGAGGATCAGGCTGCATTACAGAAGGCGTCAAAAACTGAAGTGATGTTCCTTCATGTAGCCCAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS GCA 72 bp | CATTTCACAGTGACCACCGTTCTTGCAAGAATACACTaGATTCTTGGTAATGCTACGCCGGAAAAAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HFTVTTVLARIH*ILGNATPEKAR Trigger: TCTGGCTTTTTCCGGCGTAGCATTACCAAGAATGCAGTGTATTCTTGCAAGAACGGTGGTCACTGTGAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196135.2 |
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| CDS CAA 72 bp | AAACTTAGTTCGGGGTTGGAACCCTCCTGCAGAAGTTaGCTTGTTTCTCCCAAGGGAATCATGGATTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KLSSGLEPSCRS*LVSPKGIMDFW Trigger: CCAAAAATCCATGATTCCCTTGGGAGAAACAAGCAAACTTCTGCAGGAGGGTTCCAACCCCGAACTAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS TCA 72 bp | ATTCTTCAGTTAGAGGAGCCGAAGGGTAGCCTTCCTTaGGAAAGTTTTCCGGAGAATGAACACTTTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: ILQLEEPKGSLP*ESFPENEHFHQ Trigger: CTGATGAAAGTGTTCATTCTCCGGAAAACTTTCTCAAGGAAGGCTACCCTTCGGCTCCTCTAACTGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS GCA 72 bp | CATTTCACAGTGACCACCGTTCTTGCAAGAATACACTaGATTCTTGGTAATGCTACGCCGGAAAAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: HFTVTTVLARIH*ILGNATPEKAF Trigger: AAAGGCTTTTTCCGGCGTAGCATTACCAAGAATGCAGTGTATTCTTGCAAGAACGGTGGTCACTGTGAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058899.13 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 90 bp | CGCTGGAGGAAACTGAGCGGTAGAATATTGACAATAGGGTGGTTCTaGGAAATCTGTATCACACAGCTGATAATGGAATTGTTCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RWRKLSGRILTIGWF*EICITQLIMELFWQ Trigger: TTGCCAGAACAATTCCATTATCAGCTGTGTGATACAGATTTCCAAGAACCACCCTATTGTCAATATTCTACCGCTCAGTTTCCTCCAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 90 bp | TCCCACCATAAAGCTGGGCTACATGAAGGAACATCACTTCAGTTTTaGACGCCTTCTGTAATGCAGCCTGATCCTCAGTGGTTAAATTTT | + |
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Preference number: 6 (lower is better) Translates to: SHHKAGLHEGTSLQF*TPSVMQPDPQWLNF Trigger: AAAATTTAACCACTGAGGATCAGGCTGCATTACAGAAGGCGTCAAAAACTGAAGTGATGTTCCTTCATGTAGCCCAGCTTTATGGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000197412.5 |
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| CDS CCA 72 bp | CCAAGGGAATCATGGATTTTTGGTGAACAGTCACTATaGTATTCAGAAGCCGATGTTCCTCTTGAGTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: PRESWIFGEQSL*YSEADVPLELE Trigger: CTCTAACTCAAGAGGAACATCGGCTTCTGAATACCATAGTGACTGTTCACCAAAAATCCATGATTCCCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 72 bp | TCCTCAGTGGTTAAATTTTCAAATCCTGGGAGTCCCTaGGTAAACTTCATTAGCCCTTGTATGTGGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: SSVVKFSNPGSP*VNFISPCMWRT Trigger: AGTCCTCCACATACAAGGGCTAATGAAGTTTACCAAGGGACTCCCAGGATTTGAAAATTTAACCACTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS TCA 72 bp | ATCACTTCAGTTTTTGACGCCTTCTGTAATGCAGCCTaGTCCTCAGTGGTTAAATTTTCAAATCCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: ITSVFDAFCNAA*SSVVKFSNPGS Trigger: ACTCCCAGGATTTGAAAATTTAACCACTGAGGATCAGGCTGCATTACAGAAGGCGTCAAAAACTGAAGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 72 bp | AAGTTTGCTTGTTTCTCCCAAGGGAATCATGGATTTTaGGTGAACAGTCACTATGGTATTCAGAAGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: KFACFSQGNHGF*VNSHYGIQKPM Trigger: CATCGGCTTCTGAATACCATAGTGACTGTTCACCAAAAATCCATGATTCCCTTGGGAGAAACAAGCAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CCA 72 bp | GAAATCTGTATCACACAGCTGATAATGGAATTGTTCTaGCAAAATATCATAATACTGTGTGGGTTCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: EICITQLIMELF*QNIIILCGFSE Trigger: CTCGCTGAACCCACACAGTATTATGATATTTTGCCAGAACAATTCCATTATCAGCTGTGTGATACAGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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| CDS CAA 72 bp | AAACTGAGCGGTAGAATATTGACAATAGGGTGGTTCTaGGAAATCTGTATCACACAGCTGATAATGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: KLSGRILTIGWF*EICITQLIMEL Trigger: CAATTCCATTATCAGCTGTGTGATACAGATTTCCAAGAACCACCCTATTGTCAATATTCTACCGCTCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058899.13 ENSMUST00000196135.2 ENSMUST00000196983.5 ENSMUST00000197412.5 ENSMUST00000198472.5 |
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