Pregenerated sensors for NR1H4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047638Ensembl transcript IDs: ENSMUST00000058126.15, ENSMUST00000105296.9, ENSMUST00000105297.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAAAAAAGGGCATGCCAGTaGGGTTTCCTGAAGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RSLLAITFSLLSQLKTAQKRACQ*GFLKPC Trigger: ACAAGGCTTCAGGAAACCCCACTGGCATGCCCTTTT...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
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| CDS-3UTR GCA 90 bp | ACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGGTGTCCAGGCAGGCGAAATGCTaGGGGTTCTCAGGCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TKQGFCSEEDKEPAPLVSRQAKC*GFSGWY Trigger: GTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCT...GGACACCAGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | ACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGGTGTCCTGTCACAGGCATCTCTaGTACCTCAGTCTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: TKQGFCSEEDKEPAPLVSCHRHL*YLSLSL Trigger: CAGGGAGAGACTGAGGTATCAGAGATGCCTGTGACA...GGACACCAGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCTCCAAATCCAGATTCTaGCCCAGAGGGCCTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASSKSRF*PRGPAA Trigger: CGCGGCAGGCCCTCTGGGGCAGAATCTGGATTTGGA...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | ACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGGTGTCCCGAGGAGGAAATCTGTaGCTGAACTTGAGGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TKQGFCSEEDKEPAPLVSRGGNL*LNLRKR Trigger: CCGTTTCCTCAAGTTCAGCCACAGATTTCCTCCTCG...GGACACCAGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | GGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTAGCATCTCAGCGTGGTaGTGGTTGAATGTCCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GTNETRFLFRGGQGASPTSISAW*WLNVRS Trigger: ACTCCGGACATTCAACCATCACCACGCTGAGATGCT...AGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | GGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTAAACATGGCCTCCACTaGGGACCCTTTGAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTNETRFLFRGGQGASPTKHGLH*GPFEQS Trigger: GCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTT...AGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCAGGCAGGCGAAATGCTaGGGGTTCTCAGGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASRQAKC*GFSGWY Trigger: GTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCT...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCTTAGCCGGCACTCCTaGCACTTCCTGCGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASLSRHS*HFLRMY Trigger: GTACATGCGCAGGAAGTGCCAGGAGTGCCGGCTAAG...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTTGCAGCCCTCACAGGTaGGCGCGTTGTAGTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCCSPHR*ARCSGT Trigger: GGTACCACTACAACGCGCTCACCTGTGAGGGCTGCA...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | GGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTTCCAACAGGTCTGCATaGCCGGCAGGAAGTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTNETRFLFRGGQGASPTSNRSA*PAGSFL Trigger: TAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGA...AGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTAGGAGGCAGGCGAAATaGTGCGGGTTCTCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCRRQAK*CGFSGW Trigger: CCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCT...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCTGTCACAGGCATCTCTaGTACCTCAGTCTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASCHRHL*YLSLSL Trigger: CAGGGAGAGACTGAGGTATCAGAGATGCCTGTGACA...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | ACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGGTGTCCACGAGAATCTGTACATaGCTGGTTGCCATTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKQGFCSEEDKEPAPLVSTRICT*LVAISV Trigger: AACAGAAATGGCAACCAGTCATGTACAGATTCTCGT...GGACACCAGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | GGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGTTCCGTTTTCTCCCTaGAAAACTTGGTTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTNETRFLFRGGQGASPTVPFSP*KTWLWR Trigger: CCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAAC...AGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCAAACATGGCCTCCACTaGGGACCCTTTGAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASKHGLH*GPFEQS Trigger: GCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTT...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCGAGGAGGAAATCTGTaGCTGAACTTGAGGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: NQVQTKQGFCSEEDKEPARGGNL*LNLRKR Trigger: CCGTTTCCTCAAGTTCAGCCACAGATTTCCTCCTCG...GGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACCTCAGTCTCTCCCTaGTACCCAGTCTCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRTSVSP*YPVSAG Trigger: GCCCGCTGAGACTGGGTACCAGGGAGAGACTGAGGT...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGCTTAGCCGGCACTCCTaGCACTTCCTGCGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRLSRHS*HFLRMY Trigger: GTACATGCGCAGGAAGTGCCAGGAGTGCCGGCTAAG...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AGTTTACTTTCTGGAAATGACCTGCCCTCCAACTCAATAAGATTCCCGTCATCATGCAGCCCTCACAGGTaGGCGCGTTGTAGTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: SLLSGNDLPSNSIRFPSSCSPHR*ARCSGT Trigger: GGTACCACTACAACGCGCTCACCTGTGAGGGCTGCA...TGATGACGGGAATCTTATTGAGTTGGAGGGCAGGTCATTTCCAGAAAGTAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
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| CDS-3UTR TCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCTCCAACAGGTCTGCATaGCCGGCAGGAAGTTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASSNRSA*PAGSFL Trigger: TAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGA...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGCAGCGTGGTGATGGTTaGATGTCCGGAGTTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRQRGDG*MSGVPS Trigger: TGACGGAACTCCGGACATTCAACCATCACCACGCTG...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTCAGCGTGGTGATGGTTaGATGTCCGGAGTTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCQRGDG*MSGVPS Trigger: TGACGGAACTCCGGACATTCAACCATCACCACGCTG...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | GGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTCAGGCTGGTACATCTTaGACAGCTTTTGTAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: GTNETRFLFRGGQGASPTQAGTS*TAFVAH Trigger: ATGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTG...AGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGCTTAGCCGGCACTCCTaGCACTTCCTGCGCATGTAC | + |
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Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRLSRHS*HFLRMY Trigger: GTACATGCGCAGGAAGTGCCAGGAGTGCCGGCTAAG...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCTCTCCCTGCAAAACTTaGTTGTGGAGGTCACTTGTC | + |
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Preference number: 4 (lower is better) Translates to: NQVQTKQGFCSEEDKEPASPCKT*LWRSLV Trigger: GACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGA...GGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTCCGAACGAAGAAACATaGCCTCCACTGCGGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCPNEET*PPLRTL Trigger: AAGGGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGG...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGTGTCACAGGCATCTCTaGTACCTCAGTCTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRCHRHL*YLSLSL Trigger: CAGGGAGAGACTGAGGTATCAGAGATGCCTGTGACA...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTAAACATGGCCTCCACTaGGGACCCTTTGAGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCKHGLH*GPFEQS Trigger: GCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTT...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGCCGAACGAAGAAACATaGCCTCCACTGCGGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRPNEET*PPLRTL Trigger: AAGGGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGG...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCGATGTATTGTCTGTCTaGAGAGAGGATGACGATCGC | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASDVLSV*REDDDR Trigger: GCGATCGTCATCCTCTCTCCAGACAGACAATACATC...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGCCACTGCGGACCCTTTaGGCAAAGCAATCTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRPLRTL*AKQSDL Trigger: AAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGG...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AGTTTACTTTCTGGAAATGACCTGCCCTCCAACTCAATAAGATTCCCGTCATCACAGCGTGGTGATGGTTaGATGTCCGGAGTTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLLSGNDLPSNSIRFPSSQRGDG*MSGVPS Trigger: TGACGGAACTCCGGACATTCAACCATCACCACGCTG...TGATGACGGGAATCTTATTGAGTTGGAGGGCAGGTCATTTCCAGAAAGTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
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| CDS-3UTR TCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGAGCATCTCAGCGTGGTaGTGGTTGAATGTCCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRSISAW*WLNVRS Trigger: ACTCCGGACATTCAACCATCACCACGCTGAGATGCT...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCAGGCTGGTACATCTTaGACAGCTTTTGTAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASQAGTS*TAFVAH Trigger: ATGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTG...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR CCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCTGCAAAACTTGGTTGTaGAGGTCACTTGTCGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASCKTWL*RSLVAS Trigger: ACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCA...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCACGAGAATCTGTACATaGCTGGTTGCCATTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASTRICT*LVAISV Trigger: AACAGAAATGGCAACCAGTCATGTACAGATTCTCGT...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGCCACTGCGGACCCTTTaGGCAAAGCAATCTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRPLRTL*AKQSDL Trigger: AAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGG...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCAGGAAGTTTCTTATTaGAAATCTCCGCCGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPGTNETRFLFRGGQGASQEVSY*KSPPNE Trigger: TTCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTG...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGTCCAACAGGTCTGCATaGCCGGCAGGAAGTTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRSNRSA*PAGSFL Trigger: TAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGA...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR TCA 90 bp | AACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCTCCTGAGTCATTTTaGGTTCTCCAACACTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: NQVQTKQGFCSEEDKEPAPPESF*VLQHFY Trigger: ATAAAAGTGTTGGAGAACTCAAAATGACTCAGGAGG...GGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTGTTCCGTTTTCTCCCTaGAAAACTTGGTTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCVPFSP*KTWLWR Trigger: CCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAAC...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR GCA 90 bp | CGTCATCACTTAAAGAGATACTCCTCAATTTCTTTTTGTCCAAATGAGAAGTCTTCCAAATCCAGATTCTaGCCCAGAGGGCCTGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RHHLKRYSSISFCPNEKSSKSRF*PRGPAA Trigger: CGCGGCAGGCCCTCTGGGGCAGAATCTGGATTTGGA...AGACTTCTCATTTGGACAAAAAGAAATTGAGGAGTATCTCTTTAAGTGATGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR GCA 90 bp | CGTCATCACTTAAAGAGATACTCCTCAATTTCTTTTTGTCCAAATGAGAAGTCTAGGAGGCAGGCGAAATaGTGCGGGTTCTCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHHLKRYSSISFCPNEKSRRQAK*CGFSGW Trigger: CCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCT...AGACTTCTCATTTGGACAAAAAGAAATTGAGGAGTATCTCTTTAAGTGATGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCACATAAATATTCATTGAGATTCTTGAGTGAAACCAGGTACAAACGAAACAGGAGGCAGGCGAAATaGTGCGGGTTCTCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHKYSLRFLSETRYKRNRRQAK*CGFSGW Trigger: CCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCT...GTTTCGTTTGTACCTGGTTTCACTCAAGAATCTCAATGAATATTTATGTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGACCTCAGTCTCTCCCTaGTACCCAGTCTCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFVQMRSLLAITFSLLSQTSVSP*YPVSAG Trigger: GCCCGCTGAGACTGGGTACCAGGGAGAGACTGAGGT...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTTGCAAAACTTGGTTGTaGAGGTCACTTGTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCCKTWL*RSLVAS Trigger: ACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCA...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGTCTCCCTGCAAAACTTaGTTGTGGAGGTCACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRSPCKT*LWRSLV Trigger: GACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGA...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGACGAGAATCTGTACATaGCTGGTTGCCATTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRTRICT*LVAISV Trigger: AACAGAAATGGCAACCAGTCATGTACAGATTCTCGT...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR GCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGCAGGCTGGTACATCTTaGACAGCTTTTGTAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRQAGTS*TAFVAH Trigger: ATGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTG...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGAGGCAGGCGAAATGCTaGGGGTTCTCAGGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFVQMRSLLAITFSLLSQRQAKC*GFSGWY Trigger: GTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCT...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTACTTTCTGGAAATGACCTGCCCTCCAACTCAATAAGATTCCCGTCATCAGATGTATTGTCTGTCTaGAGAGAGGATGACGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSGNDLPSNSIRFPSSDVLSV*REDDDR Trigger: GCGATCGTCATCCTCTCTCCAGACAGACAATACATC...TGATGACGGGAATCTTATTGAGTTGGAGGGCAGGTCATTTCCAGAAAGTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR TCA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGCAGGAAGTTTCTTATTaGAAATCTCCGCCGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLSETRYKRNKVSVPRRQEVSY*KSPPNE Trigger: TTCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTG...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGCCTCCTGAGTCATTTTaGGTTCTCCAACACTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRPPESF*VLQHFY Trigger: ATAAAAGTGTTGGAGAACTCAAAATGACTCAGGAGG...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR TCA 90 bp | CGTCATCACTTAAAGAGATACTCCTCAATTTCTTTTTGTCCAAATGAGAAGTCTCCACTGCGGACCCTTTaGGCAAAGCAATCTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHHLKRYSSISFCPNEKSPLRTL*AKQSDL Trigger: AAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGG...AGACTTCTCATTTGGACAAAAAGAAATTGAGGAGTATCTCTTTAAGTGATGACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCACATAAATATTCATTGAGATTCTTGAGTGAAACCAGGTACAAACGAAACCGAGGAGGAAATCTGTaGCTGAACTTGAGGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHKYSLRFLSETRYKRNRGGNL*LNLRKR Trigger: CCGTTTCCTCAAGTTCAGCCACAGATTTCCTCCTCG...GTTTCGTTTGTACCTGGTTTCACTCAAGAATCTCAATGAATATTTATGTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGGAATCTGTACATGACTaGTTGCCATTTCTGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LSETRYKRNKVSVPRRTRESVHD*LPFLLI Trigger: TATTAACAGAAATGGCAACCAGTCATGTACAGATTC...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGGTTCCGTTTTCTCCCTaGAAAACTTGGTTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVQMRSLLAITFSLLSQVPFSP*KTWLWR Trigger: CCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAAC...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAATCTCCCTGCAAAACTTaGTTGTGGAGGTCACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLLAITFSLLSQLKTAQSPCKT*LWRSLV Trigger: GACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGA...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAAGATGTATTGTCTGTCTaGAGAGAGGATGACGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLLAITFSLLSQLKTAQDVLSV*REDDDR Trigger: GCGATCGTCATCCTCTCTCCAGACAGACAATACATC...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTGCAAAACTTGGTTGTaGAGGTCACTTGTCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFVQMRSLLAITFSLLSQCKTWL*RSLVAS Trigger: ACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCA...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGCAGGAAGTTTCTTATTaGAAATCTCCGCCGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFVQMRSLLAITFSLLSQQEVSY*KSPPNE Trigger: TTCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTG...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAACCTCCTGAGTCATTTTaGGTTCTCCAACACTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSLLAITFSLLSQLKTAQPPESF*VLQHFY Trigger: ATAAAAGTGTTGGAGAACTCAAAATGACTCAGGAGG...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAAGAATCTGTACATGACTaGTTGCCATTTCTGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: RSLLAITFSLLSQLKTAQESVHD*LPFLLI Trigger: TATTAACAGAAATGGCAACCAGTCATGTACAGATTC...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CCA 90 bp | CGTCATCACTTAAAGAGATACTCCTCAATTTCTTTTTGTCCAAATGAGAAGTCTGAATCTGTACATGACTaGTTGCCATTTCTGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: RHHLKRYSSISFCPNEKSESVHD*LPFLLI Trigger: TATTAACAGAAATGGCAACCAGTCATGTACAGATTC...AGACTTCTCATTTGGACAAAAAGAAATTGAGGAGTATCTCTTTAAGTGATGACG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS CCA 90 bp | GTCAGGCGACCCAGGAGGCAGGCGAAATGCTGCGGGTTCTCAGGCTaGTACATCTTGCACAGCTTTTGTAGCACATCAAGCAGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRRPRRQAKCCGFSG*YILHSFCSTSSRGS Trigger: GGAGCCCCTGCTTGATGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCTGGGTCGCCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 90 bp | AATGTCCGGAGTTCCGTCAGGCGACCCAGGAGGCAGGCGAAATGCTaGGGGTTCTCAGGCTGGTACATCTTGCACAGCTTTTGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NVRSSVRRPRRQAKC*GFSGWYILHSFCST Trigger: TGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCTGGGTCGCCTGACGGAACTCCGGACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 90 bp | TTGAATGTCCGGAGTTCCGTCAGGCGACCCAGGAGGCAGGCGAAATaGTGCGGGTTCTCAGGCTGGTACATCTTGCACAGCTTTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LNVRSSVRRPRRQAK*CGFSGWYILHSFCS Trigger: GCTACAAAAGCTGTGCAAGATGTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCTGGGTCGCCTGACGGAACTCCGGACATTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CCA 90 bp | CTGCAGCTTCTCCACCGCCTCTCTGTCCTTGATGTATTGTCTGTCTaGAGAGAGGATGACGATCGCTGTGAGCAGAGCGTACTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQLLHRLSVLDVLSV*REDDDRCEQSVLLL Trigger: CAGGAGGAGTACGCTCTGCTCACAGCGATCGTCATCCTCTCTCCAGACAGACAATACATCAAGGACAGAGAGGCGGTGGAGAAGCTGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 90 bp | GATCATTCACTCTCCAAGACATCAGCATCTCAGCGTGGTGATGGTTaGATGTCCGGAGTTCCGTCAGGCGACCCAGGAGGCAGGCGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: DHSLSKTSASQRGDG*MSGVPSGDPGGRRN Trigger: ATTTCGCCTGCCTCCTGGGTCGCCTGACGGAACTCCGGACATTCAACCATCACCACGCTGAGATGCTGATGTCTTGGAGAGTGAATGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCGGTTGTGGAGGTCACTaGTCGCAAGTCACGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPGTNETRFLFRGGQGASGCGGH*SQVTPF Trigger: GAAGGGCGTGACTTGCGACAAGTGACCTCCACAACC...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCATCCAGGAGGGTCTGTaGGTCTGCCGTGAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KPGTNETRFLFRGGQGASIQEGL*VCREFR Trigger: ACGGAACTCACGGCAGACCAACAGACCCTCCTGGAT...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CCA 90 bp | GGAGGAAATCTGTGGCTGAACTTGAGGAAACGGGACATTGTTGTATaGGGAGTACGATTCCAAATCCAGATTCTGCCCCAGAGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGNLWLNLRKRDIVV*GVRFQIQILPQRAC Trigger: GCAGGCCCTCTGGGGCAGAATCTGGATTTGGAATCGTACTCCCCATACAACAATGTCCCGTTTCCTCAAGTTCAGCCACAGATTTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGGTGTCCAATCTGTGGCTGAACTaGAGGAAACGGGACATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TKQGFCSEEDKEPAPLVSNLWLN*RKRDIV Trigger: AACAATGTCCCGTTTCCTCAAGTTCAGCCACAGATT...GGACACCAGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCCTGCAAAACTTGGTaGTGGAGGTCACTTGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: NQVQTKQGFCSEEDKEPAPCKTW*WRSLVA Trigger: TGCGACAAGTGACCTCCACAACCAAGTTTTGCAGGG...GGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCCCACTGGTGTCCGCAGGAAGTTTCTTATaGAAAATCTCCGCCGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: TKQGFCSEEDKEPAPLVSAGSFL*KISAER Trigger: TCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTGC...GGACACCAGTGGGGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 90 bp | AAATCTCCGCCGAACGAAGAAACATGGCCTCCACTGCGGACCCTTTaGGCAAAGCAATCTGATCTTCGTGATCCAGTGTCTGAAACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSPPNEETWPPLRTL*AKQSDLRDPVSETL Trigger: CAGGGTTTCAGACACTGGATCACGAAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGGCGGAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 90 bp | TGGTACATCTTGCACAGCTTTTGTAGCACATCAAGCAGGGGCTCCTaGAGCTTCTCCACCGCCTCTCTGTCCTTGATGTATTGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WYILHSFCSTSSRGS*SFSTASLSLMYCLS Trigger: AGACAGACAATACATCAAGGACAGAGAGGCGGTGGAGAAGCTGCAGGAGCCCCTGCTTGATGTGCTACAAAAGCTGTGCAAGATGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTATCCAGGAGGGTCTGTaGGTCTGCCGTGAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCIQEGL*VCREFR Trigger: ACGGAACTCACGGCAGACCAACAGACCCTCCTGGAT...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 90 bp | TTCTTTCTTCCAACAGGTCTGCATGACCGGCAGGAAGTTTCTTATTaGAAATCTCCGCCGAACGAAGAAACATGGCCTCCACTGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FFLPTGLHDRQEVSY*KSPPNEETWPPLRT Trigger: GGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGAAGAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CCA 90 bp | CAGGAGAATACCAGTCTTCCGGTTGTTGGGGGTAGAAGCCCAGGTTaGAATAGTAAGACGAGGAGGAAATCTGTGGCTGAACTTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QENTSLPVVGGRSPG*NSKTRRKSVAELEE Trigger: TTCCTCAAGTTCAGCCACAGATTTCCTCCTCGTCTTACTATTCCAACCTGGGCTTCTACCCCCAACAACCGGAAGACTGGTATTCTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCTTGTACACGGCGTTCTaGGTAATGCTTCTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NQVQTKQGFCSEEDKEPALYTAF*VMLLRK Trigger: CTTCCGAAGAAGCATTACCAAGAACGCCGTGTACAA...GGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 90 bp | CATACCTTTAGCTGGCTTCACACTCATCCCTTCCGGCACAAATCCTaGCAGCCGGTGGCTGTGGTGAAGACTAATCTGAATTGGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTFSWLHTHPFRHKS*QPVAVVKTNLNWIF Trigger: GAAAATCCAATTCAGATTAGTCTTCACCACAGCCACCGGCTGTCAGGATTTGTGCCGGAAGGGATGAGTGTGAAGCCAGCTAAAGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGATACCAGTCTTCCGGTaGTTGGGGGTAGAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RFLSETRYKRNKVSVPRRIPVFR*LGVEAQ Trigger: CTGGGCTTCTACCCCCAACAACCGGAAGACTGGTAT...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCCTCTGTCCTTGATGTATaGTCTGTCTGGAGAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NQVQTKQGFCSEEDKEPASVLDV*SVWRED Trigger: ATCCTCTCTCCAGACAGACAATACATCAAGGACAGA...GGCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 90 bp | ACTTGTCGCAAGTCACGCCCTTCGCTGTCGTCCTCATTAGCTGTCTaGTCAGCGTGCTGCTTCACATTTTTCCTTAGCCGTTTAGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: TCRKSRPSLSSSLAV*SACCFTFFLSRLDL Trigger: TAAATCTAAACGGCTAAGGAAAAATGTGAAGCAGCACGCTGATCAGACAGCTAATGAGGACGACAGCGAAGGGCGTGACTTGCGACAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGAGCCAGCAATCTGTGGCTGAACTaGAGGAAACGGGACATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPGTNETRFLFRGGQGASNLWLN*RKRDIV Trigger: AACAATGTCCCGTTTCCTCAAGTTCAGCCACAGATT...GCTGGCTCCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTACTTTCTGGAAATGACCTGCCCTCCAACTCAATAAGATTCCCGTCATCAATACCAGTCTTCCGGTaGTTGGGGGTAGAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLSGNDLPSNSIRFPSSIPVFR*LGVEAQ Trigger: CTGGGCTTCTACCCCCAACAACCGGAAGACTGGTAT...TGATGACGGGAATCTTATTGAGTTGGAGGGCAGGTCATTTCCAGAAAGTAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGCCATTCGCGGCTTCTTaGTCACAGGCATCTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LSETRYKRNKVSVPRRTRPFAAS*SQASLI Trigger: TATCAGAGATGCCTGTGACAAAGAAGCCGCGAATGG...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTCCATTCGCGGCTTCTTaGTCACAGGCATCTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCPFAAS*SQASLI Trigger: TATCAGAGATGCCTGTGACAAAGAAGCCGCGAATGG...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGACCGCCTCTCTGTCCTaGATGTATTGTCTGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSETRYKRNKVSVPRRTRTASLS*MYCLSG Trigger: TCCAGACAGACAATACATCAAGGACAGAGAGGCGGT...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 90 bp | TTTCTTATTGAAAATCTCCGCCGAACGAAGAAACATGGCCTCCACTaGGGACCCTTTGAGCAAAGCAATCTGATCTTCGTGATCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLIENLRRTKKHGLH*GPFEQSNLIFVIQC Trigger: ACACTGGATCACGAAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGGCGGAGATTTTCAATAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTTTGTACACGGCGTTCTaGGTAATGCTTCTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCLYTAF*VMLLRK Trigger: CTTCCGAAGAAGCATTACCAAGAACGCCGTGTACAA...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGTTCTCCCTGCAAAACTaGGTTGTGGAGGTCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSETRYKRNKVSVPRRTRFSLQN*VVEVTC Trigger: ACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAA...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTTCAGGCTGGTACATCTaGCACAGCTTTTGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCSGWYI*HSFCST Trigger: TGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGA...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGACAAGGTCAGGCTGGTACATCTaGCACAGCTTTTGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSETRYKRNKVSVPRRTRSGWYI*HSFCST Trigger: TGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGA...CCTTGTCCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 90 bp | TTTGTTGTACGAATCCATAATATAATCCAGGAGGGTCTGTTGGTCTaGCGTGAGTTCCGTTTTCTCCCTGCAAAACTTGGTTGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FVVRIHNIIQEGLLV*REFRFLPAKLGCGG Trigger: ACCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAACTCACGGCAGACCAACAGACCCTCCTGGATTATATTATGGATTCGTACAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 90 bp | CTCATCAGAGATACCACTCTTTCGAATTCTTTCTTCCAACAGGTCTaGATGACCGGCAGGAAGTTTCTTATTGAAAATCTCCGCCGAACG | + |
|
Preference number: 5 (lower is better) Translates to: LIRDTTLSNSFFQQV*MTGRKFLIENLRRT Trigger: CGTTCGGCGGAGATTTTCAATAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGAAGAAAGAATTCGAAAGAGTGGTATCTCTGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGGGGAAAGCAGTTCTATCTAGTCTGTATTTACAACCGTGGGAGGTGTTCTGTCCTTGATGTATaGTCTGTCTGGAGAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TVWGKQFYLVCIYNRGRCSVLDV*SVWRED Trigger: ATCCTCTCTCCAGACAGACAATACATCAAGGACAGA...ACACCTCCCACGGTTGTAAATACAGACTAGATAGAACTGCTTTCCCCACACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AGATTCTTGAGTGAAACCAGGTACAAACGAAACAAGGTTTCTGTTCCGAGGAGGTCAGGCTGGTACATCTaGCACAGCTTTTGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RFLSETRYKRNKVSVPRRSGWYI*HSFCST Trigger: TGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGA...CCTCCTCGGAACAGAAACCTTGTTTCGTTTGTACCTGGTTTCACTCAAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 90 bp | TCAGAGATACCACTCTTTCGAATTCTTTCTTCCAACAGGTCTGCATaGCCGGCAGGAAGTTTCTTATTGAAAATCTCCGCCGAACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEIPLFRILSSNRSA*PAGSFLLKISAERR Trigger: TCTTCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGAAGAAAGAATTCGAAAGAGTGGTATCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGGGTTGTGGAGGTCACTaGTCGCAAGTCACGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFVQMRSLLAITFSLLSQGCGGH*SQVTPF Trigger: GAAGGGCGTGACTTGCGACAAGTGACCTCCACAACC...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | TTGCCACATAAATATTCATTGAGATTCTTGAGTGAAACCAGGTACAAACGAAACGGTTGTGGAGGTCACTaGTCGCAAGTCACGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPHKYSLRFLSETRYKRNGCGGH*SQVTPF Trigger: GAAGGGCGTGACTTGCGACAAGTGACCTCCACAACC...GTTTCGTTTGTACCTGGTTTCACTCAAGAATCTCAATGAATATTTATGTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTACTTTCTGGAAATGACCTGCCCTCCAACTCAATAAGATTCCCGTCATCATTCTCCCTGCAAAACTaGGTTGTGGAGGTCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSGNDLPSNSIRFPSSFSLQN*VVEVTC Trigger: ACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAA...TGATGACGGGAATCTTATTGAGTTGGAGGGCAGGTCATTTCCAGAAAGTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | CGTCATCACTTAAAGAGATACTCCTCAATTTCTTTTTGTCCAAATGAGAAGTCTATCCAGGAGGGTCTGTaGGTCTGCCGTGAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RHHLKRYSSISFCPNEKSIQEGL*VCREFR Trigger: ACGGAACTCACGGCAGACCAACAGACCCTCCTGGAT...AGACTTCTCATTTGGACAAAAAGAAATTGAGGAGTATCTCTTTAAGTGATGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAACCCTGCAAAACTTGGTaGTGGAGGTCACTTGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLLAITFSLLSQLKTAQPCKTW*WRSLVA Trigger: TGCGACAAGTGACCTCCACAACCAAGTTTTGCAGGG...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | TTGCCACATAAATATTCATTGAGATTCTTGAGTGAAACCAGGTACAAACGAAACCCATTCGCGGCTTCTTaGTCACAGGCATCTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LPHKYSLRFLSETRYKRNPFAAS*SQASLI Trigger: TATCAGAGATGCCTGTGACAAAGAAGCCGCGAATGG...GTTTCGTTTGTACCTGGTTTCACTCAAGAATCTCAATGAATATTTATGTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCACATAAATATTCATTGAGATTCTTGAGTGAAACCAGGTACAAACGAAACACCGCCTCTCTGTCCTaGATGTATTGTCTGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPHKYSLRFLSETRYKRNTASLS*MYCLSG Trigger: TCCAGACAGACAATACATCAAGGACAGAGAGGCGGT...GTTTCGTTTGTACCTGGTTTCACTCAAGAATCTCAATGAATATTTATGTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGTACACGGCGTTCTaGGTAATGCTTCTTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFVQMRSLLAITFSLLSQLYTAF*VMLLRK Trigger: CTTCCGAAGAAGCATTACCAAGAACGCCGTGTACAA...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAATTCTCCCTGCAAAACTaGGTTGTGGAGGTCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSLLAITFSLLSQLKTAQFSLQN*VVEVTC Trigger: ACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAA...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGTCCAAATGAGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGAATCTGTGGCTGAACTaGAGGAAACGGGACATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFVQMRSLLAITFSLLSQNLWLN*RKRDIV Trigger: AACAATGTCCCGTTTCCTCAAGTTCAGCCACAGATT...CTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCTCATTTGGACAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | CGTCATCACTTAAAGAGATACTCCTCAATTTCTTTTTGTCCAAATGAGAAGTCTGCAGGAAGTTTCTTATaGAAAATCTCCGCCGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: RHHLKRYSSISFCPNEKSAGSFL*KISAER Trigger: TCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTGC...AGACTTCTCATTTGGACAAAAAGAAATTGAGGAGTATCTCTTTAAGTGATGACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCTCCTTGCTATTACATTCAGTTTATTGTCTCAGTTGAAAACAGCTCAATCTGTCCTTGATGTATaGTCTGTCTGGAGAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSLLAITFSLLSQLKTAQSVLDV*SVWRED Trigger: ATCCTCTCTCCAGACAGACAATACATCAAGGACAGA...TTGAGCTGTTTTCAACTGAGACAATAAACTGAATGTAATAGCAAGGAGACTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 |
||
| CDS GCA 72 bp | CGGAGTTCCGTCAGGCGACCCAGGAGGCAGGCGAAATaGTGCGGGTTCTCAGGCTGGTACATCTTGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSVRRPRRQAK*CGFSGWYILHS Trigger: GCTGTGCAAGATGTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCTGGGTCGCCTGACGGAACTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CAA 90 bp | CCCAGGAGGCAGGCGAAATGCTGCGGGTTCTCAGGCTGGTACATCTaGCACAGCTTTTGTAGCACATCAAGCAGGGGCTCCTGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRRQAKCCGFSGWYI*HSFCSTSSRGSCSF Trigger: GAAGCTGCAGGAGCCCCTGCTTGATGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 72 bp | CTCTCCAAGACATCAGCATCTCAGCGTGGTGATGGTTaGATGTCCGGAGTTCCGTCAGGCGACCCAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSKTSASQRGDG*MSGVPSGDPGG Trigger: GCCTCCTGGGTCGCCTGACGGAACTCCGGACATTCAACCATCACCACGCTGAGATGCTGATGTCTTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CAA 72 bp | TTCTGCCTGCCGATGCCGCGGCCATTCGCGGCTTCTTaGTCACAGGCATCTCTGATACCTCAGTCTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: FCLPMPRPFAAS*SQASLIPQSLP Trigger: AGGGAGAGACTGAGGTATCAGAGATGCCTGTGACAAAGAAGCCGCGAATGGCCGCGGCATCGGCAGGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CAA 90 bp | AGGGTCTGTTGGTCTGCCGTGAGTTCCGTTTTCTCCCTGCAAAACTaGGTTGTGGAGGTCACTTGTCGCAAGTCACGCCCTTCGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RVCWSAVSSVFSLQN*VVEVTCRKSRPSLS Trigger: CGACAGCGAAGGGCGTGACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAACTCACGGCAGACCAACAGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 72 bp | TCTCTCCCTGGTACCCAGTCTCAGCGGGCATTCGCCTaGGTTCATAGATGCCAGGAGAATACCAGTCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLPGTQSQRAFA*VHRCQENTSLP Trigger: CGGAAGACTGGTATTCTCCTGGCATCTATGAACTCAGGCGAATGCCCGCTGAGACTGGGTACCAGGGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS GCA 72 bp | GGCACTTCCTGCGCATGTACATGTCCATCACGCAGTTaGCCCCGTTCTTACACTTGTACACGGCGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTSCACTCPSRS*PRSYTCTRRSW Trigger: CCAAGAACGCCGTGTACAAGTGTAAGAACGGGGGCAACTGCGTGATGGACATGTACATGCGCAGGAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CCA 72 bp | CCCAGGAGGCAGGCGAAATGCTGCGGGTTCTCAGGCTaGTACATCTTGCACAGCTTTTGTAGCACATCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRRQAKCCGFSG*YILHSFCSTSS Trigger: GCTTGATGTGCTACAAAAGCTGTGCAAGATGTACCAGCCTGAGAACCCGCAGCATTTCGCCTGCCTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS TCA 72 bp | TCATTCACTCTCCAAGACATCAGCATCTCAGCGTGGTaGTGGTTGAATGTCCGGAGTTCCGTCAGGCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SFTLQDISISAW*WLNVRSSVRRP Trigger: GGGTCGCCTGACGGAACTCCGGACATTCAACCATCACCACGCTGAGATGCTGATGTCTTGGAGAGTGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CCA 72 bp | CTCCACCGCCTCTCTGTCCTTGATGTATTGTCTGTCTaGAGAGAGGATGACGATCGCTGTGAGCAGAGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: LHRLSVLDVLSV*REDDDRCEQSV Trigger: TACGCTCTGCTCACAGCGATCGTCATCCTCTCTCCAGACAGACAATACATCAAGGACAGAGAGGCGGTGGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CAA 72 bp | TGGCACTTCCTGCGCATGTACATGTCCATCACGCAGTaGCCCCCGTTCTTACACTTGTACACGGCGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WHFLRMYMSITQ*PPFLHLYTAFL Trigger: CAAGAACGCCGTGTACAAGTGTAAGAACGGGGGCAACTGCGTGATGGACATGTACATGCGCAGGAAGTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CAA 72 bp | TGGTCTGCCGTGAGTTCCGTTTTCTCCCTGCAAAACTaGGTTGTGGAGGTCACTTGTCGCAAGTCACGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WSAVSSVFSLQN*VVEVTCRKSRP Trigger: AGGGCGTGACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAACTCACGGCAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
||
| CDS CAA 90 bp | CGTGAGTTCCGTTTTCTCCCTGCAAAACTTGGTTGTGGAGGTCACTaGTCGCAAGTCACGCCCTTCGCTGTCGTCCTCATTAGCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: REFRFLPAKLGCGGH*SQVTPFAVVLISCL Trigger: CAGACAGCTAATGAGGACGACAGCGAAGGGCGTGACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAAAACGGAACTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS GCA 72 bp | TTGCACAGCTTTTGTAGCACATCAAGCAGGGGCTCCTaGAGCTTCTCCACCGCCTCTCTGTCCTTGATGTAT | + |
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Preference number: 6 (lower is better) Translates to: LHSFCSTSSRGS*SFSTASLSLMY Trigger: ATACATCAAGGACAGAGAGGCGGTGGAGAAGCTGCAGGAGCCCCTGCTTGATGTGCTACAAAAGCTGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS CAA 72 bp | CGTTTTCTCCCTGCAAAACTTGGTTGTGGAGGTCACTaGTCGCAAGTCACGCCCTTCGCTGTCGTCCTCATT | + |
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Preference number: 6 (lower is better) Translates to: RFLPAKLGCGGH*SQVTPFAVVLI Trigger: AATGAGGACGACAGCGAAGGGCGTGACTTGCGACAAGTGACCTCCACAACCAAGTTTTGCAGGGAGAAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS TCA 72 bp | AAGTCACGCCCTTCGCTGTCGTCCTCATTAGCTGTCTaGTCAGCGTGCTGCTTCACATTTTTCCTTAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: KSRPSLSSSLAV*SACCFTFFLSR Trigger: ACGGCTAAGGAAAAATGTGAAGCAGCACGCTGATCAGACAGCTAATGAGGACGACAGCGAAGGGCGTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS TCA 72 bp | CCGAACGAAGAAACATGGCCTCCACTGCGGACCCTTTaGGCAAAGCAATCTGATCTTCGTGATCCAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PNEETWPPLRTL*AKQSDLRDPVS Trigger: AGACACTGGATCACGAAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS GCA 72 bp | GAAAATCTCCGCCGAACGAAGAAACATGGCCTCCACTaGGGACCCTTTGAGCAAAGCAATCTGATCTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: ENLRRTKKHGLH*GPFEQSNLIFV Trigger: CACGAAGATCAGATTGCTTTGCTCAAAGGGTCCGCAGTGGAGGCCATGTTTCTTCGTTCGGCGGAGATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS CCA 72 bp | ACCAGTCTTCCGGTTGTTGGGGGTAGAAGCCCAGGTTaGAATAGTAAGACGAGGAGGAAATCTGTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: TSLPVVGGRSPG*NSKTRRKSVAE Trigger: TTCAGCCACAGATTTCCTCCTCGTCTTACTATTCCAACCTGGGCTTCTACCCCCAACAACCGGAAGACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS TCA 72 bp | CCAACAGGTCTGCATGACCGGCAGGAAGTTTCTTATTaGAAATCTCCGCCGAACGAAGAAACATGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PTGLHDRQEVSY*KSPPNEETWPP Trigger: TGGAGGCCATGTTTCTTCGTTCGGCGGAGATTTTCAATAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS CAA 72 bp | TACATGTCCATCACGCAGTTGCCCCCGTTCTTACACTaGTACACGGCGTTCTTGGTAATGCTTCTTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: YMSITQLPPFLH*YTAFLVMLLRK Trigger: CTTCCGAAGAAGCATTACCAAGAACGCCGTGTACAAGTGTAAGAACGGGGGCAACTGCGTGATGGACATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS CAA 90 bp | GCCCAGGTTGGAATAGTAAGACGAGGAGGAAATCTGTGGCTGAACTaGAGGAAACGGGACATTGTTGTATGGGGAGTACGATTCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: AQVGIVRRGGNLWLN*RKRDIVVWGVRFQI Trigger: GATTTGGAATCGTACTCCCCATACAACAATGTCCCGTTTCCTCAAGTTCAGCCACAGATTTCCTCCTCGTCTTACTATTCCAACCTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS GCA 72 bp | CGAATCCATAATATAATCCAGGAGGGTCTGTTGGTCTaGCGTGAGTTCCGTTTTCTCCCTGCAAAACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: RIHNIIQEGLLV*REFRFLPAKLG Trigger: ACCAAGTTTTGCAGGGAGAAAACGGAACTCACGGCAGACCAACAGACCCTCCTGGATTATATTATGGATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS TCA 72 bp | CCACTCTTTCGAATTCTTTCTTCCAACAGGTCTGCATaGCCGGCAGGAAGTTTCTTATTGAAAATCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PLFRILSSNRSA*PAGSFLLKISA Trigger: GGCGGAGATTTTCAATAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGAAGAAAGAATTCGAAAGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS CAA 72 bp | GTTGTACGAATCCATAATATAATCCAGGAGGGTCTGTaGGTCTGCCGTGAGTTCCGTTTTCTCCCTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VVRIHNIIQEGL*VCREFRFLPAK Trigger: TTTTGCAGGGAGAAAACGGAACTCACGGCAGACCAACAGACCCTCCTGGATTATATTATGGATTCGTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS CAA 90 bp | TCTCTGTTTGTTGTACGAATCCATAATATAATCCAGGAGGGTCTGTaGGTCTGCCGTGAGTTCCGTTTTCTCCCTGCAAAACTTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLFVVRIHNIIQEGL*VCREFRFLPAKLGC Trigger: ACAACCAAGTTTTGCAGGGAGAAAACGGAACTCACGGCAGACCAACAGACCCTCCTGGATTATATTATGGATTCGTACAACAAACAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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| CDS GCA 72 bp | GATACCACTCTTTCGAATTCTTTCTTCCAACAGGTCTaGATGACCGGCAGGAAGTTTCTTATTGAAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: DTTLSNSFFQQV*MTGRKFLIENL Trigger: GAGATTTTCAATAAGAAACTTCCTGCCGGTCATGCAGACCTGTTGGAAGAAAGAATTCGAAAGAGTGGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058126.15 ENSMUST00000105296.9 ENSMUST00000105297.2 |
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