Pregenerated sensors for NR1H3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002108Ensembl transcript IDs: ENSMUST00000002177.9, ENSMUST00000111354.2, ENSMUST00000111355.8, ENSMUST00000111356.8
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTaGTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: LSPSPSSQECLPFSV*STRGKQSVSLRHVA Trigger: GGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR CCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTaGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACACAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: TQLPGMSALLSLLHP*EAVSEPSPCGQHKG Trigger: TCCTTTGTGTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR TCA 90 bp | TTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTaGCTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LVDPNCPAARKHPTC*LSLNATQGSLLHPA Trigger: AGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR-3UTR GCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGCTGCCCTTCTCAGTCTaGTCCACCCGTGGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRLPFSV*STRGKQ Trigger: CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAG...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| 3UTR-3UTR CCA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGAGTCTGCTCCACCCGTaGGAAGCAGTCAGTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLSLLHP*EAVSEP Trigger: AGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACT...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR-3UTR CCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGAGTCTGCTCCACCCGTaGGAAGCAGTCAGTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRSLLHP*EAVSEP Trigger: AGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACT...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGTCTTCAGTCTGCTCCACCCGTaGGAAGCAGTCAGTGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LHKVALLASLFGWVNKVFSLLHP*EAVSEP Trigger: AGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACT...GAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| 3UTR TCA 72 bp | CCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTaGGCCTTCGCCATGTGGCCAACACAAAGGACACGG | + |
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Preference number: 3 (lower is better) Translates to: PSQSAPPVGSSQ*AFAMWPTQRTR Trigger: CCGTGTCCTTTGTGTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR GCA 72 bp | CAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTaGCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: QGSLLHPAPRNV*PSQSAPPVGSS Trigger: ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR CCA 72 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTaGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PGMSALLSLLHP*EAVSEPSPCGQ Trigger: TTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR CCA 72 bp | CGGGGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTaGCTAGTTTATTTGGTTGGGTCAACAAGGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RGPEEPCTKWLS*LVYLVGSTRSS Trigger: TGAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| 3UTR CCA 72 bp | CTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTaGGTCAACAAGGTCTTCAGATGGTATACAACGTTA | + |
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Preference number: 3 (lower is better) Translates to: LHKVALLASLFG*VNKVFRWYTTL Trigger: TAACGTTGTATACCATCTGAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGGACGCGCAGGCGGTCTaGGAAGGAGCGCCTGTTACA | + |
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Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQDAQAV*EGAPVT Trigger: TGTAACAGGCGCTCCTTCTCAGACCGCCTGCGCGTC...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGGCTCTGAGGGTCGGGTaGAATGGGCCAAGGCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQALRVG*NGPRRD Trigger: GTCACGCCTTGGCCCATTGCACCCGACCCTCAGAGC...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCTCGATCATGCCCAGCTaGTCTGGGCTGAGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HPAPRNVCPSQSAPPVGSSIMPS*SGLSCG Trigger: GCCACAGCTCAGCCCAGAGCAGCTGGGCATGATCGA...GCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCGCAACCCCAGTTGACTaGGGCATCCTGGCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HPAPRNVCPSQSAPPVGSATPVD*GILASS Trigger: GGAGGAAGCCAGGATGCCCCAGTCAACTGGGGTTGC...GCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAAAGCTCTGTCGGCTCTaGGAGGGTCTCTGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEAKLCRL*EGLCPG Trigger: CCCAGGGCAGAGACCCTCCCAGAGCCGACAGAGCTT...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTGTCCATGGGGCAGTaGCCACCGCTGTGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEAVSMGQ*PPLWQT Trigger: TGTCTGCCACAGCGGTGGCCACTGCCCCATGGACAC...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGGCATGTAGGTGTCCATaGGGCAGTGGCCACCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQACRCP*GSGHRC Trigger: ACAGCGGTGGCCACTGCCCCATGGACACCTACATGC...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGAGCTGTGGCAGGACTTaGGGAGGTGAGGACACCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQSCGRT*GGEDTL Trigger: AAGGGTGTCCTCACCTCCTCAAGTCCTGCCACAGCT...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGCTCCTCCCTCATGCCTaGCTGGCGGCATTTGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVLLPHA*LAAFAK Trigger: CTTCGCAAATGCCGCCAGGCAGGCATGAGGGAGGAG...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGCTCTGAGGGTCGGGTaGAATGGGCCAAGGCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LPGMSALLSLLHPWEAVSALRVG*NGPRRD Trigger: GTCACGCCTTGGCCCATTGCACCCGACCCTCAGAGC...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTACTTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSTWSWS*TLGRSA Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAAGT...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGGTGTCCATGGGGCAGTaGCCACCGCTGTGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQVSMGQ*PPLWQT Trigger: TGTCTGCCACAGCGGTGGCCACTGCCCCATGGACAC...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGTGTCCATGGGGCAGTaGCCACCGCTGTGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: FTQLPGMSALLSLLHPWEVSMGQ*PPLWQT Trigger: TGTCTGCCACAGCGGTGGCCACTGCCCCATGGACAC...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGCATGTAGGTGTCCATaGGGCAGTGGCCACCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEAACRCP*GSGHRC Trigger: ACAGCGGTGGCCACTGCCCCATGGACACCTACATGC...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGCATGCCCAGCTGCTCTaGGCTGAGCTGTGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQHAQLL*AELWQD Trigger: GTCCTGCCACAGCTCAGCCCAGAGCAGCTGGGCATG...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTCATGCCCAGCTGCTCTaGGCTGAGCTGTGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPGMSALLSLLHPWEAVSHAQLL*AELWQD Trigger: GTCCTGCCACAGCTCAGCCCAGAGCAGCTGGGCATG...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCTCTCTACTTGGAGCTaGTCCTGCACGTTGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSLSTWS*SCTLGR Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAAGTAGAGAG...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGCCGTGGGAACATCAGTaGGTCGTGGGGGTGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQPWEHQ*VVGVVD Trigger: ATCAACCACCCCCACGACCCACTGATGTTCCCACGG...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCAGGACTTGAGGAGGTaGGGACACCCTTGGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: PGMSALLSLLHPWEAVSEQDLRR*GHPWGH Trigger: GTGTCCCCAAGGGTGTCCTCACCTCCTCAAGTCCTG...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTAGCTGTGGCAGGACTTaGGGAGGTGAGGACACCCTT | + |
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Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSSCGRT*GGEDTL Trigger: AAGGGTGTCCTCACCTCCTCAAGTCCTGCCACAGCT...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGCTGCCTGGCGGCATTTaGGAAGTCGACACTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQLPGGI*EVDTPG Trigger: GCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAG...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCTGCCTGGCGGCATTTaGGAAGTCGACACTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PGMSALLSLLHPWEAVSELPGGI*EVDTPG Trigger: GCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAG...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGTCGATCATGCCCAGCTaGTCTGGGCTGAGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PGMSALLSLLHPWEAVSESIMPS*SGLSCG Trigger: GCCACAGCTCAGCCCAGAGCAGCTGGGCATGATCGA...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSHVGPV*REDADG Trigger: GCCATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAACCCCAGTTGACTaGGGCATCCTGGCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FTQLPGMSALLSLLHPWEATPVD*GILASS Trigger: GGAGGAAGCCAGGATGCCCCAGTCAACTGGGGTTGC...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGCCGTGGGAACATCAGTaGGTCGTGGGGGTGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVPWEHQ*VVGVVD Trigger: ATCAACCACCCCCACGACCCACTGATGTTCCCACGG...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCCGTGGGAACATCAGTaGGTCGTGGGGGTGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSPWEHQ*VVGVVD Trigger: ATCAACCACCCCCACGACCCACTGATGTTCCCACGG...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCGGATCTGTTCTTCTaGCAGCACACACTCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVADLFF*QHTLLP Trigger: AGGGAGGAGTGTGTGCTGTCAGAAGAACAGATCCGC...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGAC | + |
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Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQGVVPP*RLQKHD Trigger: GTCATGCTTCTGGAGACGTCACGGAGGTACAACCCC...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACGTGGCAGACATAGCGTaGTCCCTTGATGACACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANVADIA*SLDDTA Trigger: CGCAGTGTCATCAAGGGAGCACGCTATGTCTGCCAC...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCACACACTCCTCCCTCATaGCTGCCTGGCGGCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYARLSPSPSSQECLPFSHTPPS*LPGGIC Trigger: GCAAATGCCGCCAGGCAGGCATGAGGGAGGAGTGTG...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCATCGATCATGCCCAGCTaGTCTGGGCTGAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CYARLSPSPSSQECLPFSSIMPS*SGLSCG Trigger: GCCACAGCTCAGCCCAGAGCAGCTGGGCATGATCGA...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTCGCCTGTTACACTGTTaGTGGGCAGCCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGMSALLSLLHPWEAVSRLLHC*WAATSF Trigger: GAAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCG...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQHVGPV*REDADG Trigger: GCCATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAACTTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CYARLSPSPSSQECLPFSTWSWS*TLGRSA Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAAGT...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCACATGCCCAGCTGCTCTaGGCTGAGCTGTGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVDSPLMLRKALSFTQLPHAQLL*AELWQD Trigger: GTCCTGCCACAGCTCAGCCCAGAGCAGCTGGGCATG...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACGCCAGCTCAGTAAAGTaGGCAAAGCGCTGTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANASSVK*AKRCCR Trigger: CCGACAACAGCGCTTTGCCCACTTTACTGAGCTGGC...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAACCGTGGGAACATCAGTaGGTCGTGGGGGTGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTQLPGMSALLSLLHPWEPWEHQ*VVGVVD Trigger: ATCAACCACCCCCACGACCCACTGATGTTCCCACGG...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACAGAAACATCAGGCATTaGGGCCTCCAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANRNIRH*GLQPQG Trigger: TCCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCT...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGAGAAACATCAGGCATTaGGGCCTCCAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVRNIRH*GLQPQG Trigger: TCCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCT...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGGCGGATCTGTTCTTCTaGCAGCACACACTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGMSALLSLLHPWEAVSEADLFF*QHTLLP Trigger: AGGGAGGAGTGTGTGCTGTCAGAAGAACAGATCCGC...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGGCGGATCTGTTCTTCTaGCAGCACACACTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQADLFF*QHTLLP Trigger: AGGGAGGAGTGTGTGCTGTCAGAAGAACAGATCCGC...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCAGGACTTGAGGAGGTaGGGACACCCTTGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCQDLRR*GHPWGH Trigger: GTGTCCCCAAGGGTGTCCTCACCTCCTCAAGTCCTG...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCCAGGACTTGAGGAGGTaGGGACACCCTTGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLNATQGSLLHPAPRNVQDLRR*GHPWGH Trigger: GTGTCCCCAAGGGTGTCCTCACCTCCTCAAGTCCTG...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | GGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGGACGCGCAGGCGGTCTaGGAAGGAGCGCCTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GPEEPCTKWLSWLVYLVGDAQAV*EGAPVT Trigger: TGTAACAGGCGCTCCTTCTCAGACCGCCTGCGCGTC...CCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCTCCTCCCTCATGCCTaGCTGGCGGCATTTGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NATQGSLLHPAPRNVCPSLLPHA*LAAFAK Trigger: CTTCGCAAATGCCGCCAGGCAGGCATGAGGGAGGAG...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGACTCCTCCCTCATGCCTaGCTGGCGGCATTTGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGLLPHA*LAAFAK Trigger: CTTCGCAAATGCCGCCAGGCAGGCATGAGGGAGGAG...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGACACACTCCTCCCTCATaGCTGCCTGGCGGCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGHTPPS*LPGGIC Trigger: GCAAATGCCGCCAGGCAGGCATGAGGGAGGAGTGTG...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCACGCCTGTTACACTGTTaGTGGGCAGCCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CYARLSPSPSSQECLPFSRLLHC*WAATSF Trigger: GAAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCG...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTACTTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NATQGSLLHPAPRNVCPSTWSWS*TLGRSA Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAAGT...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCACGAAGGGCAAACACTTaGTCTGAATGGACGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEARRANT*SEWTLL Trigger: GAGCAGCGTCCATTCAGAGCAAGTGTTTGCCCTTCG...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCGGAAGCTTTTTGTCCTaGAGGCGAAGGGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: HPAPRNVCPSQSAPPVGSGSFLS*RRRANT Trigger: AGTGTTTGCCCTTCGCCTGCAGGACAAAAAGCTTCC...GCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGCTTTTTCCGCTTTTGTaGACGAAGCTCTGTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQLFPLL*TKLCRL Trigger: GAGCCGACAGAGCTTCGTCCACAAAAGCGGAAAAAG...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTCATGCCCAGCTGCTCTaGGCTGAGCTGTGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPHAQLL*AELWQD Trigger: GTCCTGCCACAGCTCAGCCCAGAGCAGCTGGGCATG...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAACTGTTACACTGTTGCTaGGCAGCCACCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FTQLPGMSALLSLLHPWELLHCC*AATSFS Trigger: CGAGAAGCTGGTGGCTGCCCAGCAACAGTGTAACAG...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCACTCTCTACTTGGAGCTaGTCCTGCACGTTGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVDSPLMLRKALSFTQLPLSTWS*SCTLGR Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAAGTAGAGAG...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGACTCTCTACTTGGAGCTaGTCCTGCACGTTGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGLSTWS*SCTLGR Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAAGTAGAGAG...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAAACATCAGTGGGTCGTaGGGGTGGTTGATGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: FTQLPGMSALLSLLHPWENISGS*GWLMET Trigger: CGTCTCCATCAACCACCCCCACGACCCACTGATGTT...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTAACATCAGTGGGTCGTaGGGGTGGTTGATGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LPGMSALLSLLHPWEAVSNISGS*GWLMET Trigger: CGTCTCCATCAACCACCCCCACGACCCACTGATGTT...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGTGGTCTCCTGCATCTTaGGGTTCTGTCTTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVWSPAS*GSVFHN Trigger: GTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCA...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCGACGCGCAGGCGGTCTaGGAAGGAGCGCCTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NTQPVDSPLMLRKALSFTDAQAV*EGAPVT Trigger: TGTAACAGGCGCTCCTTCTCAGACCGCCTGCGCGTC...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTGGCAAACACTTGCTCTaGATGGACGCTGCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSGKHLL*MDAAQS Trigger: ACTTTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCC...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPEEPCTKWLSWLVYLVGGRIP*SPRSSA Trigger: TGCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...AACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGCACACTCCTCCCTCATaGCTGCCTGGCGGCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPEEPCTKWLSWLVYLVGHTPPS*LPGGIC Trigger: GCAAATGCCGCCAGGCAGGCATGAGGGAGGAGTGTG...CCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGGCCTGTTCCTCTTCTTaGCGCTTCAGTTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQACSSS*RFSFFK Trigger: CTTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGC...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCACGCCTGTTACACTGTTaGTGGGCAGCCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVDSPLMLRKALSFTQLPRLLHC*WAATSF Trigger: GAAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCG...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTAGCTCTGAGGGTCGGGTaGAATGGGCCAAGGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQQPENTQPVDSPLMLALRVG*NGPRRD Trigger: GTCACGCCTTGGCCCATTGCACCCGACCCTCAGAGC...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGAAGTCAACAATCTCCTaGACGGACACGATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGMSALLSLLHPWEAVSEKSTIS*TDTMAS Trigger: GCTGGCCATCGTGTCCGTGCAGGAGATTGTTGACTT...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCGAAGGGCAAACACTTaGTCTGAATGGACGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGMSALLSLLHPWEAVSERRANT*SEWTLL Trigger: GAGCAGCGTCCATTCAGAGCAAGTGTTTGCCCTTCG...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGGAAGCTTTTTGTCCTaGAGGCGAAGGGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVGSFLS*RRRANT Trigger: AGTGTTTGCCCTTCGCCTGCAGGACAAAAAGCTTCC...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | GGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGGCAACCCCAGTTGACTaGGGCATCCTGGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPEEPCTKWLSWLVYLVGATPVD*GILASS Trigger: GGAGGAAGCCAGGATGCCCCAGTCAACTGGGGTTGC...CCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCACTTTTTCCGCTTTTGTaGACGAAGCTCTGTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEALFPLL*TKLCRL Trigger: GAGCCGACAGAGCTTCGTCCACAAAAGCGGAAAAAG...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCTTTTTCCGCTTTTGTaGACGAAGCTCTGTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSLFPLL*TKLCRL Trigger: GAGCCGACAGAGCTTCGTCCACAAAAGCGGAAAAAG...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGAGCCAGGGAGCTGTTTaGCAAAGTCAACAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQSQGAV*QSQQSP Trigger: AGGAGATTGTTGACTTTGCCAAACAGCTCCCTGGCT...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCACCTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYARLSPSPSSQECLPFSPAALL*QSLPGC Trigger: ACAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGG...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGAACACTTGCTCTGAATaGACGCTGCTCAAAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSQECLPFSVCSTRGKQNTCSE*TLLKVR Trigger: CCGTACTTTGAGCAGCGTCCATTCAGAGCAAGTGTT...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCGCGGATCTGTTCTTCTaGCAGCACACACTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNATQGSLLHPAPRNVADLFF*QHTLLP Trigger: AGGGAGGAGTGTGTGCTGTCAGAAGAACAGATCCGC...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | AACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTGACGCGCAGGCGGTCTaGGAAGGAGCGCCTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NVSRSQLPSSQKTPNLLTDAQAV*EGAPVT Trigger: TGTAACAGGCGCTCCTTCTCAGACCGCCTGCGCGTC...AGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGGCAAACACTTGCTCTaGATGGACGCTGCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTQLPGMSALLSLLHPWEGKHLL*MDAAQS Trigger: ACTTTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCC...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGGGCAAACACTTGCTCTaGATGGACGCTGCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQGKHLL*MDAAQS Trigger: ACTTTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCC...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTGTGGCAGACATAGCGTaGTCCCTTGATGACACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NATQGSLLHPAPRNVCPSVADIA*SLDDTA Trigger: CGCAGTGTCATCAAGGGAGCACGCTATGTCTGCCAC...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCGTGGCAGACATAGCGTaGTCCCTTGATGACACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLNATQGSLLHPAPRNVVADIA*SLDDTA Trigger: CGCAGTGTCATCAAGGGAGCACGCTATGTCTGCCAC...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTATCGATCATGCCCAGCTaGTCTGGGCTGAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQQPENTQPVDSPLMLSIMPS*SGLSCG Trigger: GCCACAGCTCAGCCCAGAGCAGCTGGGCATGATCGA...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTAAGCATGACCTCGATTaGAGAGGTCTTCAGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGMSALLSLLHPWEAVSKHDLD*RGLQQG Trigger: GCCTTGCTGAAGACCTCTGCAATCGAGGTCATGCTT...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCATCCACATATGTGTGTTaGAGCCTCTCTACTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEASTYVC*SLSTWS Trigger: GCTCCAAGTAGAGAGGCTGCAACACACATATGTGGA...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCGCAACCCCAGTTGACTaGGGCATCCTGGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTQPVDSPLMLRKALSFTATPVD*GILASS Trigger: GGAGGAAGCCAGGATGCCCCAGTCAACTGGGGTTGC...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCCTGTTACACTGTTGCTaGGCAGCCACCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLNATQGSLLHPAPRNVLLHCC*AATSFS Trigger: CGAGAAGCTGGTGGCTGCCCAGCAACAGTGTAACAG...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAGCCAGCTCAGTAAAGTaGGCAAAGCGCTGTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGASSVK*AKRCCR Trigger: CCGACAACAGCGCTTTGCCCACTTTACTGAGCTGGC...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCCCTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNATQGSLLHPAPRNVPAALL*QSLPGC Trigger: ACAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGG...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACGCTCATTCATGGCTCTaGAGAACTCAAAGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANAHSWL*RTQRWG Trigger: ACCCCATCTTTGAGTTCTCCAGAGCCATGAATGAGC...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAAACATCAGTGGGTCGTaGGGGTGGTTGATGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PVDSPLMLRKALSFTQLPNISGS*GWLMET Trigger: CGTCTCCATCAACCACCCCCACGACCCACTGATGTT...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAAACACTTGCTCTGAATaGACGCTGCTCAAAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEANTCSE*TLLKVR Trigger: CCGTACTTTGAGCAGCGTCCATTCAGAGCAAGTGTT...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACAACACTTGCTCTGAATaGACGCTGCTCAAAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANNTCSE*TLLKVR Trigger: CCGTACTTTGAGCAGCGTCCATTCAGAGCAAGTGTT...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAAGAAACATCAGGCATTaGGGCCTCCAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVDSPLMLRKALSFTQLPRNIRH*GLQPQG Trigger: TCCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCT...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTQPVDSPLMLRKALSFTGVVPP*RLQKHD Trigger: GTCATGCTTCTGGAGACGTCACGGAGGTACAACCCC...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACCTTCCACAACTCCGTTaGAGAATCAGGAGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANLPQLR*RIRRNI Trigger: GATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAG...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTGTGGCAGACATAGCGTaGTCCCTTGATGACACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPVADIA*SLDDTA Trigger: CGCAGTGTCATCAAGGGAGCACGCTATGTCTGCCAC...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGCTGCCTGGCGGCATTTaGGAAGTCGACACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLLPGGI*EVDTPG Trigger: GCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAG...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTGCCTGGCGGCATTTaGGAAGTCGACACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVSRSQLPSSQKTPNLLTLPGGI*EVDTPG Trigger: GCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAG...AGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCGCCTGTTACACTGTTaGTGGGCAGCCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTQPVDSPLMLRKALSFTRLLHC*WAATSF Trigger: GAAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCG...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCAAGTCAACAATCTCCTaGACGGACACGATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCKSTIS*TDTMAS Trigger: GCTGGCCATCGTGTCCGTGCAGGAGATTGTTGACTT...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCATCAGCATCATTGAGTTaGAGCTCATTCATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLPGMSALLSLLHPWEASASLS*SSFMAL Trigger: CAGAGCCATGAATGAGCTGCAACTCAATGATGCTGA...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACTCAGCATCATTGAGTTaGAGCTCATTCATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTRGKQSVSLRHVANSASLS*SSFMAL Trigger: CAGAGCCATGAATGAGCTGCAACTCAATGATGCTGA...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLTWSWS*TLGRSA Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAAGT...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCCACATATGTGTGTTaGAGCCTCTCTACTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQSTYVC*SLSTWS Trigger: GCTCCAAGTAGAGAGGCTGCAACACACATATGTGGA...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGGCATGTAGGTGTCCATaGGGCAGTGGCCACCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQACRCP*GSGHRC Trigger: ACAGCGGTGGCCACTGCCCCATGGACACCTACATGC...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTAGCCAGGGAGCTGTTTaGCAAAGTCAACAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGMSALLSLLHPWEAVSSQGAV*QSQQSP Trigger: AGGAGATTGTTGACTTTGCCAAACAGCTCCCTGGCT...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGGCTCATTCATGGCTCTaGAGAACTCAAAGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQAHSWL*RTQRWG Trigger: ACCCCATCTTTGAGTTCTCCAGAGCCATGAATGAGC...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGCTCTCTACTTGGAGCTaGTCCTGCACGTTGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLLSTWS*SCTLGR Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAAGTAGAGAG...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTAACATCAGTGGGTCGTaGGGGTGGTTGATGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: RGPEEPCTKWLSWLVYLVNISGS*GWLMET Trigger: CGTCTCCATCAACCACCCCCACGACCCACTGATGTT...AACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTAGAAACATCAGGCATTaGGGCCTCCAGCCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPEEPCTKWLSWLVYLVRNIRH*GLQPQG Trigger: TCCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCT...AACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLGVVPP*RLQKHD Trigger: GTCATGCTTCTGGAGACGTCACGGAGGTACAACCCC...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRGVVPP*RLQKHD Trigger: GTCATGCTTCTGGAGACGTCACGGAGGTACAACCCC...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCGGCAAACACTTGCTCTaGATGGACGCTGCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCGKHLL*MDAAQS Trigger: ACTTTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCC...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGCTTCCACAACTCCGTTaGAGAATCAGGAGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQLPQLR*RIRRNI Trigger: GATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAG...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGAAGTCAACAATCTCCTaGACGGACACGATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPEEPCTKWLSWLVYLVGKSTIS*TDTMAS Trigger: GCTGGCCATCGTGTCCGTGCAGGAGATTGTTGACTT...CCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCAAGCATGACCTCGATTaGAGAGGTCTTCAGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCKHDLD*RGLQQG Trigger: GCCTTGCTGAAGACCTCTGCAATCGAGGTCATGCTT...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCTTGATGAACTCCACCTaGAGCCCTGCTTTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCLMNST*SPALAK Trigger: CTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAA...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVSRSQLPSSQKTPNLLTHVGPV*REDADG Trigger: GCCATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...AGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCGGAAGCTTTTTGTCCTaGAGGCGAAGGGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNATQGSLLHPAPRNVGSFLS*RRRANT Trigger: AGTGTTTGCCCTTCGCCTGCAGGACAAAAAGCTTCC...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCTGTTACACTGTTGCTaGGCAGCCACCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NTQPVDSPLMLRKALSFTLLHCC*AATSFS Trigger: CGAGAAGCTGGTGGCTGCCCAGCAACAGTGTAACAG...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAGCCTGTTCCTCTTCTTaGCGCTTCAGTTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGACSSS*RFSFFK Trigger: CTTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGC...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTGCCTGTTCCTCTTCTTaGCGCTTCAGTTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NATQGSLLHPAPRNVCPSACSSS*RFSFFK Trigger: CTTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGC...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGCCTGTTCCTCTTCTTaGCGCTTCAGTTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVDSPLMLRKALSFTQLPACSSS*RFSFFK Trigger: CTTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGC...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTACGAAGGGCAAACACTTaGTCTGAATGGACGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQQPENTQPVDSPLMLRRANT*SEWTLL Trigger: GAGCAGCGTCCATTCAGAGCAAGTGTTTGCCCTTCG...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACGCATGTAGGTGTCCATaGGGCAGTGGCCACCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRWYTTLVDPNCPAARKHACRCP*GSGHRC Trigger: ACAGCGGTGGCCACTGCCCCATGGACACCTACATGC...GTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGCCTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRPAALL*QSLPGC Trigger: ACAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGG...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGCCTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQPAALL*QSLPGC Trigger: ACAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGG...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTTGCAGCTCATTCATaGCTCTGGAGAACTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CYARLSPSPSSQECLPFSVAAHS*LWRTQR Trigger: TCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAAC...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAAACACTTGCTCTGAATaGACGCTGCTCAAAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGNTCSE*TLLKVR Trigger: CCGTACTTTGAGCAGCGTCCATTCAGAGCAAGTGTT...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | TTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACAGCTGTGGCAGGACTTaGGGAGGTGAGGACACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRWYTTLVDPNCPAARKHSCGRT*GGEDTL Trigger: AAGGGTGTCCTCACCTCCTCAAGTCCTGCCACAGCT...GTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCAAACTCAGCATCATTaGGTTGCAGCTCATTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCQTQHH*VAAHSW Trigger: CCATGAATGAGCTGCAACTCAATGATGCTGAGTTTG...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR TCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGACAAACTCAGCATCATTaGGTTGCAGCTCATTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGQTQHH*VAAHSW Trigger: CCATGAATGAGCTGCAACTCAATGATGCTGAGTTTG...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | GTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGATCAGCATCATTGAGTTaGAGCTCATTCATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDSPLMLRKALSFTQLPGSASLS*SSFMAL Trigger: CAGAGCCATGAATGAGCTGCAACTCAATGATGCTGA...TCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | TTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRWYTTLVDPNCPAARKHHVGPV*REDADG Trigger: GCCATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...GTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTCCACATATGTGTGTTaGAGCCTCTCTACTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPSTYVC*SLSTWS Trigger: GCTCCAAGTAGAGAGGCTGCAACACACATATGTGGA...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCGTTGCAGCTCATTCATaGCTCTGGAGAACTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNATQGSLLHPAPRNVCVAAHS*LWRTQR Trigger: TCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAAC...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGTTGATGAACTCCACCTaGAGCCCTGCTTTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRLMNST*SPALAK Trigger: CTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAA...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGTTGATGAACTCCACCTaGAGCCCTGCTTTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLLMNST*SPALAK Trigger: CTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAA...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR GCA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGTTGATGAACTCCACCTaGAGCCCTGCTTTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQLMNST*SPALAK Trigger: CTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAA...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTCAGCATCATTGAGTTaGAGCTCATTCATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPSASLS*SSFMAL Trigger: CAGAGCCATGAATGAGCTGCAACTCAATGATGCTGA...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACGCCAGCTCAGTAAAGTaGGCAAAGCGCTGTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FRWYTTLVDPNCPAARKHASSVK*AKRCCR Trigger: CCGACAACAGCGCTTTGCCCACTTTACTGAGCTGGC...GTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTAGCTCATTCATGGCTCTaGAGAACTCAAAGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAQQPENTQPVDSPLMLAHSWL*RTQRWG Trigger: ACCCCATCTTTGAGTTCTCCAGAGCCATGAATGAGC...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGTCTTCGGAAGCTTTTTGTCCTaGAGGCGAAGGGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LHKVALLASLFGWVNKVFGSFLS*RRRANT Trigger: AGTGTTTGCCCTTCGCCTGCAGGACAAAAAGCTTCC...GAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGCAAACTCAGCATCATTaGGTTGCAGCTCATTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQQTQHH*VAAHSW Trigger: CCATGAATGAGCTGCAACTCAATGATGCTGAGTTTG...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGCTTCCACAACTCCGTTaGAGAATCAGGAGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRLPQLR*RIRRNI Trigger: GATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAG...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGCTTCCACAACTCCGTTaGAGAATCAGGAGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQLPQLR*RIRRNI Trigger: GATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAG...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGTCTTCAGCCAGGGAGCTGTTTaGCAAAGTCAACAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHKVALLASLFGWVNKVFSQGAV*QSQQSP Trigger: AGGAGATTGTTGACTTTGCCAAACAGCTCCCTGGCT...GAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CCA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGGTTGCAGCTCATTCATaGCTCTGGAGAACTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRVAAHS*LWRTQR Trigger: TCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAAC...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| CDS-3UTR CCA 90 bp | TTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACGTTGCAGCTCATTCATaGCTCTGGAGAACTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRWYTTLVDPNCPAARKHVAAHS*LWRTQR Trigger: TCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAAC...GTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| 3UTR CAA 72 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTaGGTTGGGTCAACAAGGTCTTCAGATGGTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: EPCTKWLSWLVY*VGSTRSSDGIQ Trigger: TTGTATACCATCTGAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
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| CDS TCA 90 bp | CTGAGGGTCGGGTGCAATGGGCCAAGGCGTGACGCGCAGGCGGTCTaGGAAGGAGCGCCTGTTACACTGTTGCTGGGCAGCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRVGCNGPRRDAQAV*EGAPVTLLLGSHQL Trigger: AAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCGCTCCTTCTCAGACCGCCTGCGCGTCACGCCTTGGCCCATTGCACCCGACCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSRRKNP*QPSQLS Trigger: GCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCACCTGCCTGGCGGCATTaGCGAAGTCGACACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQLPGMSALLSLLHPWEAPAWRH*RSRHSW Trigger: CCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGG...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGGTGGGCAAAGCGCTGTaGTCGGGCTTCCCGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGMSALLSLLHPWEAVSEVGKAL*SGFPAL Trigger: CAGAGCCGGGAAGCCCGACAACAGCGCTTTGCCCAC...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCACGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CYARLSPSPSSQECLPFSRRKNP*QPSQLS Trigger: GCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAACCTGCCTGGCGGCATTaGCGAAGTCGACACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTQLPGMSALLSLLHPWEPAWRH*RSRHSW Trigger: CCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGG...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCGCCTGTTACACTGTaGCTGGGCAGCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVAPVTL*LGSHQL Trigger: AAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCGC...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGACCTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSQECLPFSVCSTRGKQTCSPA*AKSSRL Trigger: CAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGGT...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCGAGAAACATCAGGCATaGAGGCCTCCAGCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPAPRNVCPSQSAPPVGSEKHQA*RPPATR Trigger: CCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCTC...GCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCGGACACCGAAGTGGCTaGAGCCTGTTCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HPAPRNVCPSQSAPPVGSGHRSG*SLFLFL Trigger: CAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCC...GCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCGTGGGCAAAGCGCTGTaGTCGGGCTTCCCGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLNATQGSLLHPAPRNVCVGKAL*SGFPAL Trigger: CAGAGCCGGGAAGCCCGACAACAGCGCTTTGCCCAC...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | TCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGCCAACACCTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVCSTRGKQSVSLRHVANTCSPA*AKSSRL Trigger: CAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGGT...GTTGGCCACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS GCA 90 bp | CTTCTGACAGCACACACTCCTCCCTCATGCCTGCCTGGCGGCATTTaGGAAGTCGACACTCCTGGCATTTCCGCCGCATGTAGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLTAHTPPSCLPGGI*EVDTPGISAACRCP Trigger: TGGACACCTACATGCGGCGGAAATGCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGGCATGAGGGAGGAGTGTGTGCTGTCAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGCTGAGGATGCAAGTGTaGCCTCCCTGGTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQLRMQV*PPWSPA Trigger: TGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAG...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAACTGAGGATGCAAGTGTaGCCTCCCTGGTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTQLPGMSALLSLLHPWELRMQV*PPWSPA Trigger: TGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAG...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGCTAAAGCAACCCCAGTaGACTGGGGCATCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVLKQPQ*TGASWL Trigger: AAGCCAGGATGCCCCAGTCAACTGGGGTTGCTTTAG...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCACTAAAGCAACCCCAGTaGACTGGGGCATCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TQLPGMSALLSLLHPWEALKQPQ*TGASWL Trigger: AAGCCAGGATGCCCCAGTCAACTGGGGTTGCTTTAG...TGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTGCCCTTTTTCCGCTTTaGTGGACGAAGCTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSALFPL*WTKLCR Trigger: CCGACAGAGCTTCGTCCACAAAAGCGGAAAAAGGGC...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAATGGAAGCCAGAGGCTTaGTCCCCACAGACACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FTQLPGMSALLSLLHPWEWKPEA*SPQTLH Trigger: GTGCAGTGTCTGTGGGGACAAAGCCTCTGGCTTCCA...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTGGAAGCCAGAGGCTTaGTCCCCACAGACACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQWKPEA*SPQTLH Trigger: GTGCAGTGTCTGTGGGGACAAAGCCTCTGGCTTCCA...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | CCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCACCTGCCTGGCGGCATTaGCGAAGTCGACACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVDSPLMLRKALSFTQLPPAWRH*RSRHSW Trigger: CCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGG...TGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGGGACACCGAAGTGGCTaGAGCCTGTTCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVGHRSG*SLFLFL Trigger: CAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCC...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTGTGGGCAAAGCGCTGTaGTCGGGCTTCCCGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPVGKAL*SGFPAL Trigger: CAGAGCCGGGAAGCCCGACAACAGCGCTTTGCCCAC...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGGCCCTTTTTCCGCTTTaGTGGACGAAGCTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGMSALLSLLHPWEAVSEALFPL*WTKLCR Trigger: CCGACAGAGCTTCGTCCACAAAAGCGGAAAAAGGGC...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCATGGAAGCCAGAGGCTTaGTCCCCACAGACACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CYARLSPSPSSQECLPFSWKPEA*SPQTLH Trigger: GTGCAGTGTCTGTGGGGACAAAGCCTCTGGCTTCCA...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTGCGCCTGTTACACTGTaGCTGGGCAGCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NATQGSLLHPAPRNVCPSAPVTL*LGSHQL Trigger: AAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCGC...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCGCGCCTGTTACACTGTaGCTGGGCAGCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLNATQGSLLHPAPRNVAPVTL*LGSHQL Trigger: AAGCTGGTGGCTGCCCAGCAACAGTGTAACAGGCGC...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAATTGCAGCCTCTCTACTaGGAGCTGGTCCTGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTQLPGMSALLSLLHPWELQPLY*ELVLHV Trigger: AACGTGCAGGACCAGCTCCAAGTAGAGAGGCTGCAA...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS-3UTR CAA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTTGCAGCCTCTCTACTaGGAGCTGGTCCTGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQLQPLY*ELVLHV Trigger: AACGTGCAGGACCAGCTCCAAGTAGAGAGGCTGCAA...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CCA 90 bp | GTGGCAGGACTTGAGGAGGTGAGGACACCCTTGGGGACACCGAAGTaGCTTGAGCCTGTTCCTCTTCTTGCCGCTTCAGTTTCTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VAGLEEVRTPLGTPK*LEPVPLLAASVSSS Trigger: GCTTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCCCCAAGGGTGTCCTCACCTCCTCAAGTCCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CCA 90 bp | TCCAGAAGCATGACCTCGATTGCAGAGGTCTTCAGCAAGGCGATCTaGTCCTCCCTGCTGAGCTGTAGGAAGCCAGGGAGCTGTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSMTSIAEVFSKAI*SSLLSCRKPGSCLA Trigger: TGCCAAACAGCTCCCTGGCTTCCTACAGCTCAGCAGGGAGGACCAGATCGCCTTGCTGAAGACCTCTGCAATCGAGGTCATGCTTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGAGAAACATCAGGCATaGAGGCCTCCAGCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CYARLSPSPSSQECLPFSEKHQA*RPPATR Trigger: CCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCTC...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGCCTTCGCCATGTGCTGGTCTCCTGCATCTaGAGGTTCTGTCTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PFSVCSTRGKQSVSLRHVLVSCI*RFCLPQ Trigger: TTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAG...CACATGGCGAAGGCTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCCTGAGGATGCAAGTGTaGCCTCCCTGGTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLNATQGSLLHPAPRNVLRMQV*PPWSPA Trigger: TGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAG...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGCCCTTTTTCCGCTTTaGTGGACGAAGCTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CYARLSPSPSSQECLPFSALFPL*WTKLCR Trigger: CCGACAGAGCTTCGTCCACAAAAGCGGAAAAAGGGC...TGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGGAAGCCAGAGGCTTaGTCCCCACAGACACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLNATQGSLLHPAPRNVWKPEA*SPQTLH Trigger: GTGCAGTGTCTGTGGGGACAAAGCCTCTGGCTTCCA...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQRRKNP*QPSQLS Trigger: GCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS TCA 90 bp | GTCCTTGAGGAAGGTGATGCTCTCACTGCCGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGACCTCGATTGCAGAGGTCTTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLEEGDALTAGVVPP*RLQKHDLDCRGLQQ Trigger: TTGCTGAAGACCTCTGCAATCGAGGTCATGCTTCTGGAGACGTCACGGAGGTACAACCCCGGCAGTGAGAGCATCACCTTCCTCAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS GCA 90 bp | CCTGGCTTCCTCCCTGAGGATGCAAGTGTTGCCTCCCTGGTCTCCTaGATCTTGAGGTTCTGTCTTCCACAACTCCGTTGCAGAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGFLPEDASVASLVS*ILRFCLPQLRCRIR Trigger: CCTGATTCTGCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAGGGAGGAAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTGAGAAACATCAGGCATaGAGGCCTCCAGCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NATQGSLLHPAPRNVCPSEKHQA*RPPATR Trigger: CCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCTC...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCTTCCACAACTCCGTaGCAGAATCAGGAGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: PSSQECLPFSVCSTRGKQSSTTP*QNQEKH Trigger: ATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAGA...CTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAACTGGTCTCCTGCATCTaGAGGTTCTGTCTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: FTQLPGMSALLSLLHPWELVSCI*RFCLPQ Trigger: TTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAG...TTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTCTGGTCTCCTGCATCTaGAGGTTCTGTCTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LPGMSALLSLLHPWEAVSLVSCI*RFCLPQ Trigger: TTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAG...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTCTGAGGATGCAAGTGTaGCCTCCCTGGTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGPEEPCTKWLSWLVYLVLRMQV*PPWSPA Trigger: TGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAG...AACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCTAAAGCAACCCCAGTaGACTGGGGCATCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NATQGSLLHPAPRNVCPSLKQPQ*TGASWL Trigger: AAGCCAGGATGCCCCAGTCAACTGGGGTTGCTTTAG...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGTCTTCCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHKVALLASLFGWVNKVFRRKNP*QPSQLS Trigger: GCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...GAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGAGAAGCCAGGGAGCTGTTaGGCAAAGTCAACAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGMSALLSLLHPWEAVSEKPGSC*AKSTIS Trigger: GGAGATTGTTGACTTTGCCAAACAGCTCCCTGGCTT...CTCACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGAACTCAAAGATGGGGTaGATGAACTCCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQNSKMG*MNSTCS Trigger: GCTGCAGGTGGAGTTCATCAACCCCATCTTTGAGTT...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCTCAGCATCATTGAGTaGCAGCTCATTCATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPRNVCPSQSAPPVGSSLSIIE*QLIHGS Trigger: AGAGCCATGAATGAGCTGCAACTCAATGATGCTGAG...ACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCTTGCAGCCTCTCTACTaGGAGCTGGTCCTGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLNATQGSLLHPAPRNVCLQPLY*ELVLHV Trigger: AACGTGCAGGACCAGCTCCAAGTAGAGAGGCTGCAA...GCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTGAGAAACATCAGGCATaGAGGCCTCCAGCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPEKHQA*RPPATR Trigger: CCTTGTGGCTGGAGGCCTCAATGCCTGATGTTTCTC...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCACCTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTQPVDSPLMLRKALSFTTCSPA*AKSSRL Trigger: CAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGGT...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCTGGTCTCCTGCATCTaGAGGTTCTGTCTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: NATQGSLLHPAPRNVCPSLVSCI*RFCLPQ Trigger: TTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAG...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCTGCCTGGCGGCATTaGCGAAGTCGACACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRWYTTLVDPNCPAARKHPAWRH*RSRHSW Trigger: CCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGG...GTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCGGACACCGAAGTGGCTaGAGCCTGTTCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTQPVDSPLMLRKALSFTGHRSG*SLFLFL Trigger: CAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCC...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCAAGCCAGGGAGCTGTTaGGCAAAGTCAACAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLNATQGSLLHPAPRNVKPGSC*AKSTIS Trigger: GGAGATTGTTGACTTTGCCAAACAGCTCCCTGGCTT...GACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACCTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLTCSPA*AKSSRL Trigger: CAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAGGT...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | GCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCAGGCAAACTCAGCATCATaGAGTTGCAGCTCATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ATQGSLLHPAPRNVCPSQANSAS*SCSSFM Trigger: CATGAATGAGCTGCAACTCAATGATGCTGAGTTTGC...CTGAGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGAATGTCTGCCCTTCTCAGTCTGCTCCACCCGTGGGAAGCAGTCAGTGCAAACTCAGCATCATaGAGTTGCAGCTCATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPGMSALLSLLHPWEAVSANSAS*SCSSFM Trigger: CATGAATGAGCTGCAACTCAATGATGCTGAGTTTGC...ACTGACTGCTTCCCACGGGTGGAGCAGACTGAGAAGGGCAGACATTCCTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGCTAAAGCAACCCCAGTaGACTGGGGCATCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQLKQPQ*TGASWL Trigger: AAGCCAGGATGCCCCAGTCAACTGGGGTTGCTTTAG...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTGCCCTTTTTCCGCTTTaGTGGACGAAGCTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NVSRSQLPSSQKTPNLLTALFPL*WTKLCR Trigger: CCGACAGAGCTTCGTCCACAAAAGCGGAAAAAGGGC...AGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTAGCCTGTTCCTCTTCTaGCCGCTTCAGTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NATQGSLLHPAPRNVCPSSLFLF*PLQFLQ Trigger: TTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCT...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | GAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGGGACACCGAAGTGGCTaGAGCCTGTTCCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPCTKWLSWLVYLVGSTRGHRSG*SLFLFL Trigger: CAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCC...CCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTAACTCAAAGATGGGGTaGATGAACTCCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSQLPSSQKTPNLLTLPNSKMG*MNSTCS Trigger: GCTGCAGGTGGAGTTCATCAACCCCATCTTTGAGTT...AGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTACGCAAGGCTCTCTCCTTCACCCAGCTCCCAGGAATGTCTGCCCTTCTCTCAGCATCATTGAGTaGCAGCTCATTCATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NATQGSLLHPAPRNVCPSLSIIE*QLIHGS Trigger: AGAGCCATGAATGAGCTGCAACTCAATGATGCTGAG...AGAAGGGCAGACATTCCTGGGAGCTGGGTGAAGGAGAGAGCCTTGCGTAGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | TACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGTTGCAGCCTCTCTACTaGGAGCTGGTCCTGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: YNVSRSQLPSSQKTPNLLLQPLY*ELVLHV Trigger: AACGTGCAGGACCAGCTCCAAGTAGAGAGGCTGCAA...CAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGAGCCTGTTCCTCTTCTaGCCGCTTCAGTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPEEPCTKWLSWLVYLVGSLFLF*PLQFLQ Trigger: TTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCT...CCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCAAGCCAGGGAGCTGTTaGGCAAAGTCAACAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTQPVDSPLMLRKALSFTKPGSC*AKSTIS Trigger: GGAGATTGTTGACTTTGCCAAACAGCTCCCTGGCTT...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTAAACTCAAAGATGGGGTaGATGAACTCCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTAQQPENTQPVDSPLMLNSKMG*MNSTCS Trigger: GCTGCAGGTGGAGTTCATCAACCCCATCTTTGAGTT...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCAACTCAAAGATGGGGTaGATGAACTCCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTQPVDSPLMLRKALSFTNSKMG*MNSTCS Trigger: GCTGCAGGTGGAGTTCATCAACCCCATCTTTGAGTT...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGCCCTGAAGAACCCTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTCTCAGCATCATTGAGTaGCAGCTCATTCATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGPEEPCTKWLSWLVYLVLSIIE*QLIHGS Trigger: AGAGCCATGAATGAGCTGCAACTCAATGATGCTGAG...AACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAGGGTTCTTCAGGGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTAAGCCTGTTCCTCTTCTaGCCGCTTCAGTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTAQQPENTQPVDSPLMLSLFLF*PLQFLQ Trigger: TTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCT...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCTTCAGATGGTATACAACGTTAGTAGATCCCAACTGCCCAGCAGCCAGCTCAGCATCATTGAGTaGCAGCTCATTCATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLQMVYNVSRSQLPSSQLSIIE*QLIHGS Trigger: AGAGCCATGAATGAGCTGCAACTCAATGATGCTGAG...CTGGCTGCTGGGCAGTTGGGATCTACTAACGTTGTATACCATCTGAAGACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CCAACTGCCCAGCAGCCAGAAAACACCCAACCTGTTGACTCTCCCTTAATGCTAGCAAACTCAGCATCATaGAGTTGCAGCTCATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PTAQQPENTQPVDSPLMLANSAS*SCSSFM Trigger: CATGAATGAGCTGCAACTCAATGATGCTGAGTTTGC...TAGCATTAAGGGAGAGTCAACAGGTTGGGTGTTTTCTGGCTGCTGGGCAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | AACACCCAACCTGTTGACTCTCCCTTAATGCTACGCAAGGCTCTCTCCTTCACCGCAAACTCAGCATCATaGAGTTGCAGCTCATTCATG | + |
|
Preference number: 5 (lower is better) Translates to: NTQPVDSPLMLRKALSFTANSAS*SCSSFM Trigger: CATGAATGAGCTGCAACTCAATGATGCTGAGTTTGC...GGTGAAGGAGAGAGCCTTGCGTAGCATTAAGGGAGAGTCAACAGGTTGGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACAAAGTGGCTCTCCTGGCTAGTTTATTTGGTTGGGTCAACAAGGTCTTCAGCCTGTTCCTCTTCTaGCCGCTTCAGTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHKVALLASLFGWVNKVFSLFLF*PLQFLQ Trigger: TTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCT...GAAGACCTTGTTGACCCAACCAAATAAACTAGCCAGGAGAGCCACTTTGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002177.9 ENSMUST00000111356.8 |
||
| CDS TCA 72 bp | CCCGGCTCTGAGGGTCGGGTGCAATGGGCCAAGGCGTaGCGCGCAGGCGGTCTGAGAAGGAGCGCCTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PGSEGRVQWAKA*RAGGLRRSACY Trigger: GTAACAGGCGCTCCTTCTCAGACCGCCTGCGCGTCACGCCTTGGCCCATTGCACCCGACCCTCAGAGCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
||
| CDS TCA 72 bp | CTGCTCTGGGCTGAGCTGTGGCAGGACTTGAGGAGGTaGGGACACCCTTGGGGACACCGAAGTGGCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLWAELWQDLRR*GHPWGHRSGLS Trigger: GCTCAAGCCACTTCGGTGTCCCCAAGGGTGTCCTCACCTCCTCAAGTCCTGCCACAGCTCAGCCCAGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS TCA 72 bp | GAAGGTGATGCTCTCACTGCCGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGACCGTGACGCGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: EGDALTAGVVPP*RLQKHDRDAQA Trigger: CGCCTGCGCGTCACGGTCATGCTTCTGGAGACGTCACGGAGGTACAACCCCGGCAGTGAGAGCATCACCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111355.8 |
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| CDS GCA 72 bp | GCACACACTCCTCCCTCATGCCTGCCTGGCGGCATTTaGGAAGTCGACACTCCTGGCATTTCCGCCGCATGT | + |
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Preference number: 6 (lower is better) Translates to: AHTPPSCLPGGI*EVDTPGISAAC Trigger: ACATGCGGCGGAAATGCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGGCATGAGGGAGGAGTGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 72 bp | AGCACACACTCCTCCCTCATGCCTGCCTGGCGGCATTaGCGAAGTCGACACTCCTGGCATTTCCGCCGCATG | + |
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Preference number: 6 (lower is better) Translates to: STHSSLMPAWRH*RSRHSWHFRRM Trigger: CATGCGGCGGAAATGCCAGGAGTGTCGACTTCGCAAATGCCGCCAGGCAGGCATGAGGGAGGAGTGTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CCA 72 bp | ATGACCTCGATTGCAGAGGTCTTCAGCAAGGCGATCTaGTCCTCCCTGCTGAGCTGTAGGAAGCCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: MTSIAEVFSKAI*SSLLSCRKPGS Trigger: GCTCCCTGGCTTCCTACAGCTCAGCAGGGAGGACCAGATCGCCTTGCTGAAGACCTCTGCAATCGAGGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS CAA 72 bp | GGAGACGTAGGCGTGCAGGGCCTCCACATATGTGTGTaGCAGCCTCTCTACTTGGAGCTGGTCCTGCACGTT | + |
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Preference number: 6 (lower is better) Translates to: GDVGVQGLHICV*QPLYLELVLHV Trigger: AACGTGCAGGACCAGCTCCAAGTAGAGAGGCTGCAACACACATATGTGGAGGCCCTGCACGCCTACGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS TCA 72 bp | GGAGGTGAGGACACCCTTGGGGACACCGAAGTGGCTTaGGCCTGTTCCTCTTCTTGCCGCTTCAGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GGEDTLGDTEVA*ACSSSCRFSFF Trigger: GAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCCCCAAGGGTGTCCTCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS TCA 72 bp | GAAGGTGATGCTCTCACTGCCGGGGTTGTACCTCCGTaGCGTCTCCAGAAGCATGACCTCGATTGCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: EGDALTAGVVPP*RLQKHDLDCRG Trigger: ACCTCTGCAATCGAGGTCATGCTTCTGGAGACGTCACGGAGGTACAACCCCGGCAGTGAGAGCATCACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111356.8 |
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| CDS GCA 72 bp | CTCCCTGAGGATGCAAGTGTTGCCTCCCTGGTCTCCTaGATCTTGAGGTTCTGTCTTCCACAACTCCGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LPEDASVASLVS*ILRFCLPQLRC Trigger: GCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS GCA 72 bp | GGAAGCTTTTTGTCCTGCAGGCGAAGGGCAAACACTTaGTCTGAATGGACGCTGCTCAAAGTACGGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GSFLSCRRRANT*SEWTLLKVRRL Trigger: GAGCCTCCGTACTTTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCCCTTCGCCTGCAGGACAAAAAGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 90 bp | CTCCCTGGTCTCCTGCATCTTGAGGTTCTGTCTTCCACAACTCCGTaGCAGAATCAGGAGAAACATCAGGCATTGAGGCCTCCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LPGLLHLEVLSSTTP*QNQEKHQALRPPAT Trigger: TGTGGCTGGAGGCCTCAATGCCTGATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 72 bp | GAGGATGCAAGTGTTGCCTCCCTGGTCTCCTGCATCTaGAGGTTCTGTCTTCCACAACTCCGTTGCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: EDASVASLVSCI*RFCLPQLRCRI Trigger: GATTCTGCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAGGCAACACTTGCATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 72 bp | TGGGGACACCGAAGTGGCTTGAGCCTGTTCCTCTTCTaGCCGCTTCAGTTTCTTCAAGCGGATCTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WGHRSGLSLFLF*PLQFLQADLFF Trigger: GAAGAACAGATCCGCTTGAAGAAACTGAAGCGGCAAGAAGAGGAACAGGCTCAAGCCACTTCGGTGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 90 bp | TTCCTCCCTGAGGATGCAAGTGTTGCCTCCCTGGTCTCCTGCATCTaGAGGTTCTGTCTTCCACAACTCCGTTGCAGAATCAGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: FLPEDASVASLVSCI*RFCLPQLRCRIRRN Trigger: GTTTCTCCTGATTCTGCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAGGCAACACTTGCATCCTCAGGGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS TCA 72 bp | AGGATGCAAGTGTTGCCTCCCTGGTCTCCTGCATCTTaGGGTTCTGTCTTCCACAACTCCGTTGCAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: RMQVLPPWSPAS*GSVFHNSVAES Trigger: TGATTCTGCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAGGCAACACTTGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 72 bp | CTCCTGCATCTTGAGGTTCTGTCTTCCACAACTCCGTaGCAGAATCAGGAGAAACATCAGGCATTGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLHLEVLSSTTP*QNQEKHQALRP Trigger: AGGCCTCAATGCCTGATGTTTCTCCTGATTCTGCAACGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 90 bp | GCAGAGAAGATGCTGATGGCAATGAGCAGAGCAAACTCAGCATCATaGAGTTGCAGCTCATTCATGGCTCTGGAGAACTCAAAGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: AEKMLMAMSRANSAS*SCSSFMALENSKMG Trigger: CCCCATCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAACTCAATGATGCTGAGTTTGCTCTGCTCATTGCCATCAGCATCTTCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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| CDS CAA 72 bp | ATGCTGATGGCAATGAGCAGAGCAAACTCAGCATCATaGAGTTGCAGCTCATTCATGGCTCTGGAGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: MLMAMSRANSAS*SCSSFMALENS Trigger: TGAGTTCTCCAGAGCCATGAATGAGCTGCAACTCAATGATGCTGAGTTTGCTCTGCTCATTGCCATCAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002177.9 ENSMUST00000111354.2 ENSMUST00000111355.8 ENSMUST00000111356.8 |
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