RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR1H2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060601

Ensembl transcript IDs: ENSMUST00000073488.12, ENSMUST00000107910.8, ENSMUST00000107911.8, ENSMUST00000107912.8, ENSMUST00000128600.3, ENSMUST00000167197.8, ENSMUST00000207737.2, ENSMUST00000208322.2, ENSMUST00000208366.2

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCTGCCCTAACCTCTCTCCACTCAAGGTGCATGGTGTGGTAGGCTaGGGTGTAAGCGTGGGTGGGAGGGCAGCTGGGAACGGTCAGAGG +
Preference number: 1 (lower is better)
Translates to: TCPNLSPLKVHGVVG*GVSVGGRAAGNGQR
Trigger: CCTCTGACCGTTCCCAGCTGCCCTCCCACCCACGCTTACACCTCAGCCTACCACACCATGCACCTTGAGTGGAGAGAGGTTAGGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR CCA 90 bp AGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTaGGGCCTTCTAGTGCCAACTGCCGCTGAGTTTGAGGCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: RTCDPHHSWKTQWVG*GLLVPTAAEFEAEP
Trigger: GGGCTCAGCCTCAAACTCAGCGGCAGTTGGCACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR CCA 90 bp TCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATaGGTGGGGTGGGGCCTTCTAGTGCCAACTGCCGCTGAGTTTGAG +
Preference number: 1 (lower is better)
Translates to: SEARTCDPHHSWKTQ*VGWGLLVPTAAEFE
Trigger: CTCAAACTCAGCGGCAGTTGGCACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR TCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCCCCAGGAGGAGAGGTaGAGAGTCCATCTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAPQEER*RVHLQE
Trigger: TTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR TCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACCCCAGGAGGAGAGGTaGAGAGTCCATCTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGPQEER*RVHLQE
Trigger: TTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR TCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCCCCCAGGAGGAGAGGTaGAGAGTCCATCTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFPQEER*RVHLQE
Trigger: TTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGG...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCCCCAGGAGGAGAGGTaGAGAGTCCATCTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVPQEER*RVHLQE
Trigger: TTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR CAA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCAACTGCCGCTGAGTTaGAGGCTGAGCCCGAGGGAC +
Preference number: 3 (lower is better)
Translates to: WEGSWERSEARTCDPHHSQLPLS*RLSPRD
Trigger: GTCCCTCGGGCTCAGCCTCAAACTCAGCGGCAGTTG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR CCA 72 bp AAGGGGCAGAAGAGAGGGCCTGTGGTCTCCCAACTGTaGGGGGCCACCTGCCCTAACCTCTCTCCACTCAAG +
Preference number: 3 (lower is better)
Translates to: KGQKRGPVVSQL*GATCPNLSPLK
Trigger: CTTGAGTGGAGAGAGGTTAGGGCAGGTGGCCCCCCACAGTTGGGAGACCACAGGCCCTCTCTTCTGCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR CAA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCAACTGCCGCTGAGTTaGAGGCTGAGCCCGAGGGAC +
Preference number: 3 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLQLPLS*RLSPRD
Trigger: GTCCCTCGGGCTCAGCCTCAAACTCAGCGGCAGTTG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR-3UTR CAA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCAACTGCCGCTGAGTTaGAGGCTGAGCCCGAGGGAC +
Preference number: 3 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVQLPLS*RLSPRD
Trigger: GTCCCTCGGGCTCAGCCTCAAACTCAGCGGCAGTTG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
3UTR CCA 72 bp AGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATaGGTGGGGTGGGGCCTTCTAGTGCCAACTGCCGCT +
Preference number: 3 (lower is better)
Translates to: RTCDPHHSWKTQ*VGWGLLVPTAA
Trigger: AGCGGCAGTTGGCACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGGGCCGCTGGCCGGCCTaGGCTGCTGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKGRWPA*AAGCWL
Trigger: GAGCCAGCAGCCAGCAGCTCAGGCCGGCCAGCGGCC...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGGCCGCTGGCCGGCCTaGGCTGCTGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAGRWPA*AAGCWL
Trigger: GAGCCAGCAGCCAGCAGCTCAGGCCGGCCAGCGGCC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCGGCCGCTGGCCGGCCTaGGCTGCTGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLGRWPA*AAGCWL
Trigger: GAGCCAGCAGCCAGCAGCTCAGGCCGGCCAGCGGCC...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCGCCCGGCCCCACCGTaGACCACACTGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGARPAPP*TTLRRK
Trigger: CTTCCGGCGCAGTGTGGTCCACGGTGGGGCCGGGCG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGGCCGGCCTGAGCTGCTaGCTGCTGGCTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEAGLSC*LLAQMG
Trigger: CCCCATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGC...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGGCCGCTGGCCGGCCTaGGCTGCTGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGGRWPA*AAGCWL
Trigger: GAGCCAGCAGCCAGCAGCTCAGGCCGGCCAGCGGCC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGCTGGCCGGCCTGAGCTaGTGGCTGCTGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEELAGLS*WLLAQM
Trigger: CATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAG...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGGGCACTTGCGCCGCATaGAGGCATCCATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEGTCAA*RHPSGR
Trigger: CCTGCCAGATGGATGCCTTCATGCGGCGCAAGTGCC...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGGGCCGCTGGCCGGCCTaGGCTGCTGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRGRWPA*AAGCWL
Trigger: GAGCCAGCAGCCAGCAGCTCAGGCCGGCCAGCGGCC...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCCCGAGTGCACGGAGCTaGGGGTGCGCAGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFPSARS*GCAGSP
Trigger: TGGTGAGCCTGCGCACCCTCAGCTCCGTGCACTCGG...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCCGAGTGCACGGAGCTaGGGGTGCGCAGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAPSARS*GCAGSP
Trigger: TGGTGAGCCTGCGCACCCTCAGCTCCGTGCACTCGG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTCTGGCAGGTTCCGCTaGCCCGACAGGCATAGCGCC +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSSGRFR*PDRHSA
Trigger: GGCGCTATGCCTGTCGGGGCAGCGGAACCTGCCAGA...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCTGGCCGGCCTGAGCTaGTGGCTGCTGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSLAGLS*WLLAQM
Trigger: CATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCCGCGGTCAGCTGGATaGCCTCTCCTTCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAPRSAG*PLLPRS
Trigger: GCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACCGCGGTCAGCTGGATaGCCTCTCCTTCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGPRSAG*PLLPRS
Trigger: GCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGAAGACCTGCTCCGAGTaGACGGAGCTGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEKTCSE*TELRVR
Trigger: GCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTT...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAGCCGGCCTGAGCTGCTaGCTGCTGGCTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGAGLSC*LLAQMG
Trigger: CCCCATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGC...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGGGCTCACCAGCTTCATaGGCATGCGTGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEGSPAS*ACVGSG
Trigger: TCCGCTTCCCACGCATGCTCATGAAGCTGGTGAGCC...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTCTGGCAGGTTCCGCTaGCCCGACAGGCATAGCGCC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGASGRFR*PDRHSA
Trigger: GGCGCTATGCCTGTCGGGGCAGCGGAACCTGCCAGA...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGATCTGGCAGGTTCCGCTaGCCCGACAGGCATAGCGCC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGSGRFR*PDRHSA
Trigger: GGCGCTATGCCTGTCGGGGCAGCGGAACCTGCCAGA...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCAGCCTCCTTGCACTTaGGCAGCCGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAQPPCT*AAGRAG
Trigger: GCCAGCTCTGCCGGCTGCGCAAGTGCAAGGAGGCTG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGCAGCCTCCTTGCACTTaGGCAGCCGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKQPPCT*AAGRAG
Trigger: GCCAGCTCTGCCGGCTGCGCAAGTGCAAGGAGGCTG...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACAGCCTCCTTGCACTTaGGCAGCCGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGQPPCT*AAGRAG
Trigger: GCCAGCTCTGCCGGCTGCGCAAGTGCAAGGAGGCTG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCGCACTGCTCCCGCATaGCAGCCTCCTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSRTAPA*QPPCTC
Trigger: GCAAGTGCAAGGAGGCTGGCATGCGGGAGCAGTGCG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCCGCGGTCAGCTGGATaGCCTCTCCTTCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLPRSAG*PLLPRS
Trigger: GCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGCGCAGCCGGCAGAGCTaGCACTTGCGCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKRSRQS*HLRRMK
Trigger: CTTCATGCGGCGCAAGTGCCAGCTCTGCCGGCTGCG...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCGCCGGCCTGAGCTGCTaGCTGCTGGCTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLAGLSC*LLAQMG
Trigger: CCCCATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGC...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCCTTCCCCGGAGCCCTaGCTGCTTGCTTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSPSPEP*LLASEV
Trigger: CACTTCGGAAGCAAGCAGCCAGGGCTCCGGGGAAGG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGCGGAGGTACTGGGCTaGGGAGAACCATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAAEVLG*GEPFPG
Trigger: GCCTGGGAATGGTTCTCCTCAGCCCAGTACCTCCGC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCCAGGGGCCAGGGCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVPGARA*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCCGAGTGCACGGAGCTaGGGGTGCGCAGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVPSARS*GCAGSP
Trigger: TGGTGAGCCTGCGCACCCTCAGCTCCGTGCACTCGG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCAGCCTCCTTGCACTTaGGCAGCCGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLQPPCT*AAGRAG
Trigger: GCCAGCTCTGCCGGCTGCGCAAGTGCAAGGAGGCTG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGGCATGCCAGCCTCCTTaGACTTGCGCAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKACQPP*TCAAGR
Trigger: TCTGCCGGCTGCGCAAGTGCAAGGAGGCTGGCATGC...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCGCACTGCTCCCGCATaGCAGCCTCCTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGARTAPA*QPPCTC
Trigger: GCAAGTGCAAGGAGGCTGGCATGCGGGAGCAGTGCG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACGCACTGCTCCCGCATaGCAGCCTCCTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGRTAPA*QPPCTC
Trigger: GCAAGTGCAAGGAGGCTGGCATGCGGGAGCAGTGCG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCCGCACTGCTCCCGCATaGCAGCCTCCTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFRTAPA*QPPCTC
Trigger: GCAAGTGCAAGGAGGCTGGCATGCGGGAGCAGTGCG...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCTGGCCGGCCTGAGCTaGTGGCTGCTGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLLAGLS*WLLAQM
Trigger: CATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGGAGCCCTGGCTGCTTaGTTCCGAAGTGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAGALAA*FRSARG
Trigger: TCCCCTGGCACTTCGGAAGCAAGCAGCCAGGGCTCC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCGGAGCCCTGGCTGCTTaGTTCCGAAGTGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFGALAA*FRSARG
Trigger: TCCCCTGGCACTTCGGAAGCAAGCAGCCAGGGCTCC...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCCGCGGTCAGCTGGATaGCCTCTCCTTCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGPRSAG*PLLPRS
Trigger: GCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGG...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGAAGCAAGGCATACTCTaGATCGTCCAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEKQGIL*IVQAQP
Trigger: CGGCTGGGCCTGGACGATGCAGAGTATGCCTTGCTT...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAAGACCTGCTCCGAGTaGACGGAGCTGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGKTCSE*TELRVR
Trigger: GCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTT...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCAAGACCTGCTCCGAGTaGACGGAGCTGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAKTCSE*TELRVR
Trigger: GCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTT...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCAAGACCTGCTCCGAGTaGACGGAGCTGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFKTCSE*TELRVR
Trigger: GCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTT...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGCGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEERNAKT*SECTEL
Trigger: CAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCG...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGCTCAGATGGGGGTaGTGGCTGCTGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSWLRWG*WLLLLL
Trigger: CAGCAACAGCAGCAGCCACCACCCCCATCTGAGCCA...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACCTTCCCCGGAGCCCTaGCTGCTTGCTTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGPSPEP*LLASEV
Trigger: CACTTCGGAAGCAAGCAGCCAGGGCTCCGGGGAAGG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGCTTCATGAGCATGCGTaGGAAGCGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEELHEHA*EAELVL
Trigger: CAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGGCTCACCAGCTTCATaGGCATGCGTGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAGSPAS*ACVGSG
Trigger: TCCGCTTCCCACGCATGCTCATGAAGCTGGTGAGCC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCGAGTGCACGGAGCTaGGGGTGCGCAGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRPSARS*GCAGSP
Trigger: TGGTGAGCCTGCGCACCCTCAGCTCCGTGCACTCGG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCCGAGTGCACGGAGCTaGGGGTGCGCAGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWPSARS*GCAGSP
Trigger: TGGTGAGCCTGCGCACCCTCAGCTCCGTGCACTCGG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGGCCCCTTCTTCCGCTTaGGCTCAGGCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKAPSSA*AQAHPL
Trigger: CAGAGGATGAGCCTGAGCGCAAGCGGAAGAAGGGGC...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGCCCCTTCTTCCGCTTaGGCTCAGGCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAAPSSA*AQAHPL
Trigger: CAGAGGATGAGCCTGAGCGCAAGCGGAAGAAGGGGC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGCACCGTGGACCACACTaGGCCGGAAGAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKHRGPH*AGRSLC
Trigger: GCAAAGGCTTCTTCCGGCGCAGTGTGGTCCACGGTG...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCACCGTGGACCACACTaGGCCGGAAGAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAHRGPH*AGRSLC
Trigger: GCAAAGGCTTCTTCCGGCGCAGTGTGGTCCACGGTG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGTCTGGCAGGTTCCGCTaGCCCGACAGGCATAGCGCC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVSGRFR*PDRHSA
Trigger: GGCGCTATGCCTGTCGGGGCAGCGGAACCTGCCAGA...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCAGCCTCCTTGCACTTaGGCAGCCGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVQPPCT*AAGRAG
Trigger: GCCAGCTCTGCCGGCTGCGCAAGTGCAAGGAGGCTG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCGGAGCCCTGGCTGCTTaGTTCCGAAGTGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLGALAA*FRSARG
Trigger: TCCCCTGGCACTTCGGAAGCAAGCAGCCAGGGCTCC...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCCGCGGTCAGCTGGATaGCCTCTCCTTCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWPRSAG*PLLPRS
Trigger: GCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCGCGGTCAGCTGGATaGCCTCTCCTTCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRPRSAG*PLLPRS
Trigger: GCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTTGTTGCACTGCAGCTaGGCGGCAACTAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEELLHCS*AATNCW
Trigger: CCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAA...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSRNAKT*SECTEL
Trigger: CAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEVLESQ*KDLLRV
Trigger: CACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGAC...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTGGACCCTTCAGAGCCTaGAGGAGGATCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSGPFRA*RRISLL
Trigger: CAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCC...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTATGAAGGCATCCATCTaGCAGGTTCCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSMKASI*QVPLPR
Trigger: TCGGGGCAGCGGAACCTGCCAGATGGATGCCTTCAT...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCGCAGCCGGCAGAGCTaGCACTTGCGCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGRSRQS*HLRRMK
Trigger: CTTCATGCGGCGCAAGTGCCAGCTCTGCCGGCTGCG...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTGGCTCAGATGGGGGTaGTGGCTGCTGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAWLRWG*WLLLLL
Trigger: CAGCAACAGCAGCAGCCACCACCCCCATCTGAGCCA...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGATGGCTCAGATGGGGGTaGTGGCTGCTGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGWLRWG*WLLLLL
Trigger: CAGCAACAGCAGCAGCCACCACCCCCATCTGAGCCA...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGCCGGCCTGAGCTGCTaGCTGCTGGCTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWAGLSC*LLAQMG
Trigger: CCCCATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGC...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCCTTCCCCGGAGCCCTaGCTGCTTGCTTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLPSPEP*LLASEV
Trigger: CACTTCGGAAGCAAGCAGCCAGGGCTCCGGGGAAGG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCTTCATGAGCATGCGTaGGAAGCGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSLHEHA*EAELVL
Trigger: CAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGCGGAGGTACTGGGCTaGGGAGAACCATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGAEVLG*GEPFPG
Trigger: GCCTGGGAATGGTTCTCCTCAGCCCAGTACCTCCGC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGGCGGAGGTACTGGGCTaGGGAGAACCATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVAEVLG*GEPFPG
Trigger: GCCTGGGAATGGTTCTCCTCAGCCCAGTACCTCCGC...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGGCATGCCAGCCTCCTTaGACTTGCGCAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVACQPP*TCAAGR
Trigger: TCTGCCGGCTGCGCAAGTGCAAGGAGGCTGGCATGC...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGCATGCCAGCCTCCTTaGACTTGCGCAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGACQPP*TCAAGR
Trigger: TCTGCCGGCTGCGCAAGTGCAAGGAGGCTGGCATGC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCTGGCCGGCCTGAGCTaGTGGCTGCTGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWLAGLS*WLLAQM
Trigger: CATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCTGGCCGGCCTGAGCTaGTGGCTGCTGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRLAGLS*WLLAQM
Trigger: CATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGAAGCAAGGCATACTCTaGATCGTCCAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKKQGIL*IVQAQP
Trigger: CGGCTGGGCCTGGACGATGCAGAGTATGCCTTGCTT...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCAAGCAAGGCATACTCTaGATCGTCCAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFKQGIL*IVQAQP
Trigger: CGGCTGGGCCTGGACGATGCAGAGTATGCCTTGCTT...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGRNAKT*SECTEL
Trigger: CAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSVLESQ*KDLLRV
Trigger: CACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGAC...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCGGACCCTTCAGAGCCTaGAGGAGGATCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFGPFRA*RRISLL
Trigger: CAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCC...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGGACCCTTCAGAGCCTaGAGGAGGATCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAGPFRA*RRISLL
Trigger: CAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGATGAAGGCATCCATCTaGCAGGTTCCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKMKASI*QVPLPR
Trigger: TCGGGGCAGCGGAACCTGCCAGATGGATGCCTTCAT...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAATGAAGGCATCCATCTaGCAGGTTCCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGMKASI*QVPLPR
Trigger: TCGGGGCAGCGGAACCTGCCAGATGGATGCCTTCAT...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGCAGCCGGCAGAGCTaGCACTTGCGCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRRSRQS*HLRRMK
Trigger: CTTCATGCGGCGCAAGTGCCAGCTCTGCCGGCTGCG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCTGGCTCAGATGGGGGTaGTGGCTGCTGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLWLRWG*WLLLLL
Trigger: CAGCAACAGCAGCAGCCACCACCCCCATCTGAGCCA...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCCTTCCCCGGAGCCCTaGCTGCTTGCTTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGPSPEP*LLASEV
Trigger: CACTTCGGAAGCAAGCAGCCAGGGCTCCGGGGAAGG...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAGGCCCAGCCGCCGCATaGCCCGCGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPGPAAA*PARTRR
Trigger: TCTTCGAGTTCTCGCGGGCCATGCGGCGGCTGGGCC...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCTTCATGAGCATGCGTaGGAAGCGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGALHEHA*EAELVL
Trigger: CAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGCGGAGGTACTGGGCTaGGGAGAACCATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWAEVLG*GEPFPG
Trigger: GCCTGGGAATGGTTCTCCTCAGCCCAGTACCTCCGC...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR TCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGAGTCCTTCAGGAACGTaGTGCATTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEESPSGT*CILSRG
Trigger: ACCACGAGACAGAATGCATCACGTTCCTGAAGGACT...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGGCTCACCAGCTTCATaGGCATGCGTGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGGSPAS*ACVGSG
Trigger: TCCGCTTCCCACGCATGCTCATGAAGCTGGTGAGCC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCACCGTGGACCACACTaGGCCGGAAGAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVHRGPH*AGRSLC
Trigger: GCAAAGGCTTCTTCCGGCGCAGTGTGGTCCACGGTG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGCATGCCAGCCTCCTTaGACTTGCGCAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWACQPP*TCAAGR
Trigger: TCTGCCGGCTGCGCAAGTGCAAGGAGGCTGGCATGC...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCGCACTGCTCCCGCATaGCAGCCTCCTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWRTAPA*QPPCTC
Trigger: GCAAGTGCAAGGAGGCTGGCATGCGGGAGCAGTGCG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACTGGCCGGCCTGAGCTaGTGGCTGCTGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPLAGLS*WLLAQM
Trigger: CATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAG...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTTGTTGCACTGCAGCTaGGCGGCAACTAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFLLHCS*AATNCW
Trigger: CCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAA...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGAAGAACCCTGGCACCTaGTTGGCAAAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEKNPGT*LAKSTI
Trigger: GATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTT...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGAAGACCTGCTCCGAGTaGACGGAGCTGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWKTCSE*TELRVR
Trigger: GCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTT...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLRNAKT*SECTEL
Trigger: CAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGVLESQ*KDLLRV
Trigger: CACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGAC...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACGCAGCCGGCAGAGCTaGCACTTGCGCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPRSRQS*HLRRMK
Trigger: CTTCATGCGGCGCAAGTGCCAGCTCTGCCGGCTGCG...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCTTCATGAGCATGCGTaGGAAGCGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLLHEHA*EAELVL
Trigger: CAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSGSFLS*SRNAKT
Trigger: GGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGCTGTTTCTAGCAACATaGTCTCAATGGTGGACGCCT +
Preference number: 4 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEELFLAT*SQWWTP
Trigger: AGGCGTCCACCATTGAGATCATGTTGCTAGAAACAG...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSIRPIG*EDVDGD
Trigger: ATCGCCATCAACATCTTCTCAGCCGATCGGCCTAAT...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGGGCTCACCAGCTTCATaGGCATGCGTGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRGSPAS*ACVGSG
Trigger: TCCGCTTCCCACGCATGCTCATGAAGCTGGTGAGCC...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTGGAGGATCAGTCTCCTaGCCCTCTTCCTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: WEGSWERSEARTCDPHHSGGSVS*PSSLIV
Trigger: CACTATTAAGGAAGAGGGGCAGGAGACTGATCCTCC...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCACCGTGGACCACACTaGGCCGGAAGAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWHRGPH*AGRSLC
Trigger: GCAAAGGCTTCTTCCGGCGCAGTGTGGTCCACGGTG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCACCGTGGACCACACTaGGCCGGAAGAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRHRGPH*AGRSLC
Trigger: GCAAAGGCTTCTTCCGGCGCAGTGTGGTCCACGGTG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAGGAGCCCTGGCTGCTTaGTTCCGAAGTGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPGALAA*FRSARG
Trigger: TCCCCTGGCACTTCGGAAGCAAGCAGCCAGGGCTCC...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCAAGCAAGGCATACTCTaGATCGTCCAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGKQGIL*IVQAQP
Trigger: CGGCTGGGCCTGGACGATGCAGAGTATGCCTTGCTT...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGAAGCAAGGCATACTCTaGATCGTCCAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVKQGIL*IVQAQP
Trigger: CGGCTGGGCCTGGACGATGCAGAGTATGCCTTGCTT...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGGACCCTTCAGAGCCTaGAGGAGGATCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGGPFRA*RRISLL
Trigger: CAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCATGAAGGCATCCATCTaGCAGGTTCCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGMKASI*QVPLPR
Trigger: TCGGGGCAGCGGAACCTGCCAGATGGATGCCTTCAT...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAGGCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGGVTLG*SEKDRL
Trigger: CAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCC...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACCCTGGCACCTGCTTaGCAAAGTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKTLAPA*QSPQSP
Trigger: AGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGT...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCACCCTGGCACCTGCTTaGCAAAGTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFTLAPA*QSPQSP
Trigger: AGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGT...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCCAACTGCAAGAACCCTaGCACCTGCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAQLQEP*HLLGKV
Trigger: GACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTG...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCCAACTGCAAGAACCCTaGCACCTGCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFQLQEP*HLLGKV
Trigger: GACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTG...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGACAACTGCAAGAACCCTaGCACCTGCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGQLQEP*HLLGKV
Trigger: GACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTG...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFGSFLS*SRNAKT
Trigger: GGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGGSFLS*SRNAKT
Trigger: GGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGAGTCCTTCAGGAACGTaGTGCATTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKSPSGT*CILSRG
Trigger: ACCACGAGACAGAATGCATCACGTTCCTGAAGGACT...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGTCCTTCAGGAACGTaGTGCATTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGSPSGT*CILSRG
Trigger: ACCACGAGACAGAATGCATCACGTTCCTGAAGGACT...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: GSWERSEARTCDPHHSWKIRPIG*EDVDGD
Trigger: ATCGCCATCAACATCTTCTCAGCCGATCGGCCTAAT...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFIRPIG*EDVDGD
Trigger: ATCGCCATCAACATCTTCTCAGCCGATCGGCCTAAT...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAGGAGGATCAGTCTCCTaGCCCTCTTCCTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGGGSVS*PSSLIV
Trigger: CACTATTAAGGAAGAGGGGCAGGAGACTGATCCTCC...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGTTGTTGCACTGCAGCTaGGCGGCAACTAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVLLHCS*AATNCW
Trigger: CCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAA...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCAAGAACCCTGGCACCTaGTTGGCAAAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFKNPGT*LAKSTI
Trigger: GATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTT...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTTGATGAATTCCACCTaGAAGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFLMNST*KPARWK
Trigger: CTTCCACCGTGCAGGCTTGCAGGTGGAATTCATCAA...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRRNAKT*SECTEL
Trigger: CAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWRNAKT*SECTEL
Trigger: CAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVVLESQ*KDLLRV
Trigger: CACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGAC...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGVLESQ*KDLLRV
Trigger: CACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGAC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGATGAAGGCATCCATCTaGCAGGTTCCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRMKASI*QVPLPR
Trigger: TCGGGGCAGCGGAACCTGCCAGATGGATGCCTTCAT...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCAAGTCCACAATCTCCTaGACCGAGATGATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFKSTIS*TEMMAS
Trigger: GCTAGCCATCATCTCGGTCCAGGAGATTGTGGACTT...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCTTCATGAGCATGCGTaGGAAGCGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRLHEHA*EAELVL
Trigger: CAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLIRPIG*EDVDGD
Trigger: ATCGCCATCAACATCTTCTCAGCCGATCGGCCTAAT...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGTTGTTGCACTGCAGCTaGGCGGCAACTAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRLLHCS*AATNCW
Trigger: CCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAA...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAAAGCAAGGCATACTCTaGATCGTCCAGGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPKQGIL*IVQAQP
Trigger: CGGCTGGGCCTGGACGATGCAGAGTATGCCTTGCTT...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGGCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTG +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGGVTLG*SEKDRL
Trigger: CAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGGGCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTG +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVGVTLG*SEKDRL
Trigger: CAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCC...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCACCCTGGCACCTGCTTaGCAAAGTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGTLAPA*QSPQSP
Trigger: AGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGT...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCCAACTGCAAGAACCCTaGCACCTGCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGQLQEP*HLLGKV
Trigger: GACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTG...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCAACTGCAAGAACCCTaGCACCTGCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVQLQEP*HLLGKV
Trigger: GACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACTTCATGAGCATGCGTaGGAAGCGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPLHEHA*EAELVL
Trigger: CAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGGSFLS*SRNAKT
Trigger: GGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVGSFLS*SRNAKT
Trigger: GGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTGCTGTTGCTGCTTCTaGATCCTTTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: GPVTLTTLGRLNGWGGAFCCCCF*ILFFRI
Trigger: GATTCGGAAGAAAAGGATTCAGAAGCAGCAACAGCA...GAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGATGCTGTTGCTGCTTCTaGATCCTTTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGCCCCF*ILFFRI
Trigger: GATTCGGAAGAAAAGGATTCAGAAGCAGCAACAGCA...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTGCTGTTGCTGCTTCTaGATCCTTTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGACCCCF*ILFFRI
Trigger: GATTCGGAAGAAAAGGATTCAGAAGCAGCAACAGCA...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCCTGTTTCTAGCAACATaGTCTCAATGGTGGACGCCT +
Preference number: 4 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLLFLAT*SQWWTP
Trigger: AGGCGTCCACCATTGAGATCATGTTGCTAGAAACAG...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGAGTCCTTCAGGAACGTaGTGCATTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVSPSGT*CILSRG
Trigger: ACCACGAGACAGAATGCATCACGTTCCTGAAGGACT...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAAGTCCACAATCTCCGTaGCTTTGGGCTGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPSPQSP*LWAGRR
Trigger: TCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACT...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGAAGAACCCTGGCACCTaGTTGGCAAAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVKNPGT*LAKSTI
Trigger: GATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTT...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGGCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTG +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWGVTLG*SEKDRL
Trigger: CAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCC...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCAAGTCCACAATCTCCTaGACCGAGATGATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGKSTIS*TEMMAS
Trigger: GCTAGCCATCATCTCGGTCCAGGAGATTGTGGACTT...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGAAGTCCACAATCTCCTaGACCGAGATGATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVKSTIS*TEMMAS
Trigger: GCTAGCCATCATCTCGGTCCAGGAGATTGTGGACTT...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGACCCTGGCACCTGCTTaGCAAAGTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWTLAPA*QSPQSP
Trigger: AGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGT...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWGSFLS*SRNAKT
Trigger: GGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGTCCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTG +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVSVTLG*SEKDRL
Trigger: CAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGA...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCTGTTTCTAGCAACATaGTCTCAATGGTGGACGCCT +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVLFLAT*SQWWTP
Trigger: AGGCGTCCACCATTGAGATCATGTTGCTAGAAACAG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGAGTCCTTCAGGAACGTaGTGCATTCTGTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRSPSGT*CILSRG
Trigger: ACCACGAGACAGAATGCATCACGTTCCTGAAGGACT...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGGGAGGATCAGTCTCCTaGCCCTCTTCCTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRGGSVS*PSSLIV
Trigger: CACTATTAAGGAAGAGGGGCAGGAGACTGATCCTCC...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGAAGAACCCTGGCACCTaGTTGGCAAAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRKNPGT*LAKSTI
Trigger: GATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTT...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGTTGATGAATTCCACCTaGAAGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRLMNST*KPARWK
Trigger: CTTCCACCGTGCAGGCTTGCAGGTGGAATTCATCAA...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAGGCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTG +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPGVTLG*SEKDRL
Trigger: CAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCC...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGAAGTCCACAATCTCCTaGACCGAGATGATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRKSTIS*TEMMAS
Trigger: GCTAGCCATCATCTCGGTCCAGGAGATTGTGGACTT...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACAACTGCAAGAACCCTaGCACCTGCTTGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPQLQEP*HLLGKV
Trigger: GACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTG...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGTGCTGTTGCTGCTTCTaGATCCTTTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVCCCCF*ILFFRI
Trigger: GATTCGGAAGAAAAGGATTCAGAAGCAGCAACAGCA...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCTGTTTCTAGCAACATaGTCTCAATGGTGGACGCCT +
Preference number: 4 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWLFLAT*SQWWTP
Trigger: AGGCGTCCACCATTGAGATCATGTTGCTAGAAACAG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR TCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPIRPIG*EDVDGD
Trigger: ATCGCCATCAACATCTTCTCAGCCGATCGGCCTAAT...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAAAGAACCCTGGCACCTaGTTGGCAAAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPKNPGT*LAKSTI
Trigger: GATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTT...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR GCA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCATTGATGAATTCCACCTaGAAGCCTGCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPLMNST*KPARWK
Trigger: CTTCCACCGTGCAGGCTTGCAGGTGGAATTCATCAA...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS GCA 90 bp GAGCCGCGGTCAGCTGGATGCCCTCTCCTTCCCCGGAGCCCTGGCTaGTTGCTTCCGAAGTGCCAGGGGAGGCCGCTGGCCGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: EPRSAGCPLLPRSPG*LLPKCQGRPLAGLS
Trigger: GCTCAGGCCGGCCAGCGGCCTCCCCTGGCACTTCGGAAGCAAGCAGCCAGGGCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGCCAGCCTCCTTGCACTaGCGCAGCCGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEPASLH*RSRQSW
Trigger: CCAGCTCTGCCGGCTGCGCAAGTGCAAGGAGGCTGG...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CCA 90 bp CTTCGGGGCCGGCCCCTTCTTCCGCTTGCGCTCAGGCTCATCCTCTaGCTCCACGATGTAGGCAGAGCTGGACCCTTCAGAGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LRGRPLLPLALRLIL*LHDVGRAGPFRAWR
Trigger: CCTCCAGGCTCTGAAGGGTCCAGCTCTGCCTACATCGTGGAGCCAGAGGATGAGCCTGAGCGCAAGCGGAAGAAGGGGCCGGCCCCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000207737.2
CDS TCA 90 bp TTGCACTGCAGCTGCGCGGCAACTAACTGCTGGATCATCAGCTCCTaGGCCGCGGTCAGCTGGATGCCCTCTCCTTCCCCGGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LHCSCAATNCWIISS*AAVSWMPSPSPEPW
Trigger: CCAGGGCTCCGGGGAAGGAGAGGGCATCCAGCTGACCGCGGCTCAGGAGCTGATGATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTCGGCAGAGCTGGCACTaGCGCCGCATGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: WEGSWERSEARTCDPHHSRQSWH*RRMKAS
Trigger: GGATGCCTTCATGCGGCGCAAGTGCCAGCTCTGCCG...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGCGGCAGAGCTGGCACTaGCGCCGCATGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: GSWERSEARTCDPHHSWKRQSWH*RRMKAS
Trigger: GGATGCCTTCATGCGGCGCAAGTGCCAGCTCTGCCG...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS GCA 90 bp GATCTCGGACAGCAAGGGCGGCAGCTTCTTGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTGCACGGAGCTGAGGGTGCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: DLGQQGRQLLVLESQ*KDLLRVHGAEGAQA
Trigger: AGCCTGCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTTGCTGTCCGAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: WEGSWERSEARTCDPHHSGQGVT*GWSEKD
Trigger: ATCTTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CAA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGAAGGGCGGCAGCTTCTaGTCCTGGAGTCGCAATGCA +
Preference number: 5 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEKGGSF*SWSRNA
Trigger: TGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTT...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGCGGCAGAGCTGGCACTaGCGCCGCATGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVRQSWH*RRMKAS
Trigger: GGATGCCTTCATGCGGCGCAAGTGCCAGCTCTGCCG...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEESEKDR*LHCSCA
Trigger: CGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGA...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: GSWERSEARTCDPHHSWKGQGVT*GWSEKD
Trigger: ATCTTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CAA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAGQGVT*GWSEKD
Trigger: ATCTTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CAA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGCGGCAGAGCTGGCACTaGCGCCGCATGAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWRQSWH*RRMKAS
Trigger: GGATGCCTTCATGCGGCGCAAGTGCCAGCTCTGCCG...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: WEGSWERSEARTCDPHHSNPGTC*AKSTIS
Trigger: GGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTT...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCAAGGGCGGCAGCTTCTaGTCCTGGAGTCGCAATGCA +
Preference number: 5 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGAKGGSF*SWSRNA
Trigger: TGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTT...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp CCGAGGGACTGGGCCGTGACAATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTGGTGGCTGCTGCTGTaGCTGCTTCTGAATCCTTTT +
Preference number: 5 (lower is better)
Translates to: PRDWAVTMSSHPRRRGEEWWLLL*LLLNPF
Trigger: AAAAGGATTCAGAAGCAGCAACAGCAGCAGCCACCA...CTCTTCACCTCTCCTCCTGGGGTGGGAGGACATTGTCACGGCCCAGTCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: GSWERSEARTCDPHHSWKSEKDR*LHCSCA
Trigger: CGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGA...CTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGATCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGSEKDR*LHCSCA
Trigger: CGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGA...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGNPGTC*AKSTIS
Trigger: GGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTT...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp CTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: LGPVTLTTLGRLNGWGGANPGTC*AKSTIS
Trigger: GGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTT...GGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS TCA 90 bp CAGGGCCTCCACACGGCTGGGCTCCTGCACATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGATAAGCAAGGCATACTCTGCATCGTC +
Preference number: 5 (lower is better)
Translates to: QGLHTAGLLHIRPIG*EDVDGDKQGILCIV
Trigger: GACGATGCAGAGTATGCCTTGCTTATCGCCATCAACATCTTCTCAGCCGATCGGCCTAATGTGCAGGAGCCCAGCCGTGTGGAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TGGGAGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGTGGCTGCTGCTGTaGCTGCTTCTGAATCCTTTT +
Preference number: 5 (lower is better)
Translates to: WEGSWERSEARTCDPHHSWWLLL*LLLNPF
Trigger: AAAAGGATTCAGAAGCAGCAACAGCAGCAGCCACCA...AGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGGGCCAGGGCGTGACTTaGGGCTGGTCGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRGQGVT*GWSEKD
Trigger: ATCTTTCTCCGACCAGCCCAAAGTCACGCCCTGGCC...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS-3UTR CAA 90 bp TGTGACCCTCACCACTCTTGGAAGACTCAATGGGTGGGGTGGGGCCTTCTAGTGAAGGGCGGCAGCTTCTaGTCCTGGAGTCGCAATGCA +
Preference number: 5 (lower is better)
Translates to: CDPHHSWKTQWVGWGLLVKGGSF*SWSRNA
Trigger: TGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTT...CACTAGAAGGCCCCACCCCACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CCA 90 bp CCTGGCACCTGCTTGGCAAAGTCCACAATCTCCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTGTTGCACTGCAGCTGCGCGGCAACT +
Preference number: 5 (lower is better)
Translates to: PGTCLAKSTISVTLG*SEKDRLLHCSCAAT
Trigger: AGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp CCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGCAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: PTPGGEVKSPSSRRHHQGNPGTC*AKSTIS
Trigger: GGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTT...GCCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGAAGGGCGGCAGCTTCTaGTCCTGGAGTCGCAATGCA +
Preference number: 5 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRKGGSF*SWSRNA
Trigger: TGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTT...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp AGGGCAGCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAACAATCTCCGTGACTTaGGGCTGGTCGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: RAAGNGQRLGPVTLTTLGTISVT*GWSEKD
Trigger: ATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGT...TCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GCTGGGAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCTGGTGGCTGCTGCTGTaGCTGCTTCTGAATCCTTTT +
Preference number: 5 (lower is better)
Translates to: AGNGQRLGPVTLTTLGRLWWLLL*LLLNPF
Trigger: AAAAGGATTCAGAAGCAGCAACAGCAGCAGCCACCA...GAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp TCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCACCAAGGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: SHPRRRGEESIFKKTPPRSEKDR*LHCSCA
Trigger: CGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGA...CCTTGGTGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWSEKDR*LHCSCA
Trigger: CGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGA...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWNPGTC*AKSTIS
Trigger: GGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTT...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp ATGTCCTCCCACCCCAGGAGGAGAGGTGAAGAGTCCATCTTCAAGAAGACACCAAAGGGCGGCAGCTTCTaGTCCTGGAGTCGCAATGCA +
Preference number: 5 (lower is better)
Translates to: MSSHPRRRGEESIFKKTPKGGSF*SWSRNA
Trigger: TGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTT...TGGTGTCTTCTTGAAGATGGACTCTTCACCTCTCCTCCTGGGGTGGGAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS TCA 90 bp ACTGCAAGAACCCTGGCACCTGCTTGGCAAAGTCCACAATCTCCGTaGCTTTGGGCTGGTCGGAGAAAGATCGTTTGTTGCACTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TARTLAPAWQSPQSP*LWAGRRKIVCCTAA
Trigger: AGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS-3UTR CAA 90 bp GAACGGTCAGAGGCTAGGACCTGTGACCCTCACCACTCTTGGAAGACTCAATGGTGGTGGCTGCTGCTGTaGCTGCTTCTGAATCCTTTT +
Preference number: 5 (lower is better)
Translates to: ERSEARTCDPHHSWKTQWWWLLL*LLLNPF
Trigger: AAAAGGATTCAGAAGCAGCAACAGCAGCAGCCACCA...CCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTGACCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS TCA 72 bp TGCTTCCGAAGTGCCAGGGGAGGCCGCTGGCCGGCCTaGGCTGCTGGCTGCTGGCTCAGATGGGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: CFRSARGGRWPA*AAGCWLRWGWW
Trigger: CCACCACCCCCATCTGAGCCAGCAGCCAGCAGCTCAGGCCGGCCAGCGGCCTCCCCTGGCACTTCGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS TCA 72 bp AGCTGCGCGGCAACTAACTGCTGGATCATCAGCTCCTaGGCCGCGGTCAGCTGGATGCCCTCTCCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: SCAATNCWIISS*AAVSWMPSPSP
Trigger: CGGGGAAGGAGAGGGCATCCAGCTGACCGCGGCTCAGGAGCTGATGATCCAGCAGTTAGTTGCCGCGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS GCA 72 bp GGCAGCTTCTTGTCCTGGAGTCGCAATGCAAAGACCTaGTCCGAGTGCACGGAGCTGAGGGTGCGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GSFLSWSRNAKT*SECTELRVRRL
Trigger: GAGCCTGCGCACCCTCAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CCA 72 bp CTTCATGAGCATGCGTGGGAAGCGGAGCTGGTCCTGTaGGCGCTTGATCCTCGTGTAGGAGAGGAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: LHEHAWEAELVL*ALDPRVGEERL
Trigger: GAGGCGCTCCTCTCCTACACGAGGATCAAGCGCCCACAGGACCAGCTCCGCTTCCCACGCATGCTCATGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CCA 72 bp CGGCCCCTTCTTCCGCTTGCGCTCAGGCTCATCCTCTaGCTCCACGATGTAGGCAGAGCTGGACCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: RPLLPLALRLIL*LHDVGRAGPFR
Trigger: TCTGAAGGGTCCAGCTCTGCCTACATCGTGGAGCCAGAGGATGAGCCTGAGCGCAAGCGGAAGAAGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000207737.2
CDS GCA 72 bp CAGCAAGGGCGGCAGCTTCTTGTCCTGGAGTCGCAATaGAAAGACCTGCTCCGAGTGCACGGAGCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: QQGRQLLVLESQ*KDLLRVHGAEG
Trigger: ACCCTCAGCTCCGTGCACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CAA 90 bp CCCAGGGGCCAGGGCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCGGCAACTAACTGCTGGATCATCAGC +
Preference number: 6 (lower is better)
Translates to: PRGQGVTLGWSEKDR*LHCSCAATNCWIIS
Trigger: GCTGATGATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS GCA 72 bp CTGGACCCTTCAGAGCCTGGAGGAGGATCAGTCTCCTaGCCCTCTTCCTTAATAGTGGGTGACGTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LDPSEPGGGSVS*PSSLIVGDVAE
Trigger: CTCCGCCACGTCACCCACTATTAAGGAAGAGGGGCAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000128600.3
ENSMUST00000167197.8
ENSMUST00000207737.2
ENSMUST00000208366.2
CDS CCA 72 bp CAGATCTCGGACAGCAAGGGCGGCAGCTTCTTGTCCTaGAGTCGCAATGCAAAGACCTGCTCCGAGTGCACG +
Preference number: 6 (lower is better)
Translates to: QISDSKGGSFLS*SRNAKTCSECT
Trigger: CGTGCACTCGGAGCAGGTCTTTGCATTGCGACTCCAGGACAAGAAGCTGCCGCCCTTGCTGTCCGAGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CAA 72 bp TCCTCCCGGCCCAACTGCAAGAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCCGTGACTTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSRPNCKNPGTC*AKSTISVTLGW
Trigger: CCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTGGGCCGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS CAA 90 bp AGGGGCCAGGGCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTTGTaGCACTGCAGCTGCGCGGCAACTAACTGCTGGATCATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RGQGVTLGWSEKDRL*HCSCAATNCWIISS
Trigger: GGAGCTGATGATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS CAA 90 bp ACACGGCTGGGCTCCTGCACATTAGGCCGATCGGCTGAGAAGATGTaGATGGCGATAAGCAAGGCATACTCTGCATCGTCCAGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: TRLGSCTLGRSAEKM*MAISKAYSASSRPS
Trigger: GCTGGGCCTGGACGATGCAGAGTATGCCTTGCTTATCGCCATCAACATCTTCTCAGCCGATCGGCCTAATGTGCAGGAGCCCAGCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS TCA 72 bp TCCTTAATAGTGGGTGACGTGGCGGAGGTACTGGGCTaGGGAGAACCATTCCCAGGCACGGGAGTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: SLIVGDVAEVLG*GEPFPGTGVSR
Trigger: TCTGGACACTCCCGTGCCTGGGAATGGTTCTCCTCAGCCCAGTACCTCCGCCACGTCACCCACTATTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000128600.3
ENSMUST00000167197.8
ENSMUST00000208366.2
CDS CAA 72 bp CAGGGCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCGGCAACTAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: QGVTLGWSEKDR*LHCSCAATNCW
Trigger: CCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS CAA 72 bp TCCTCCCGGCCCAACTGCAAGAACCCTGGCACCTGCTaGGCAAAGTCCACAATCTCCTGGACCGAGATGATG +
Preference number: 6 (lower is better)
Translates to: SSRPNCKNPGTC*AKSTISWTEMM
Trigger: CATCATCTCGGTCCAGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTTGCAGTTGGGCCGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS CCA 72 bp GACCACGATGTAGGCAGAGCTGGACCCTTCAGAGCCTaGAGGAGGATCAGTCTCCTGCCCCTCTTCCTTAAT +
Preference number: 6 (lower is better)
Translates to: DHDVGRAGPFRA*RRISLLPLFLN
Trigger: ATTAAGGAAGAGGGGCAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCCAGCTCTGCCTACATCGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107912.8
ENSMUST00000128600.3
ENSMUST00000167197.8
ENSMUST00000208366.2
CDS CCA 72 bp CTCCACGATGTAGGCAGAGCTGGACCCTTCAGAGCCTaGAGGAGGATCAGTCTCCTGCCCCTCTTCCTTAAT +
Preference number: 6 (lower is better)
Translates to: LHDVGRAGPFRA*RRISLLPLFLN
Trigger: ATTAAGGAAGAGGGGCAGGAGACTGATCCTCCTCCAGGCTCTGAAGGGTCCAGCTCTGCCTACATCGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000207737.2
CDS CAA 72 bp GGCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTTGTaGCACTGCAGCTGCGCGGCAACTAACTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: GVTLGWSEKDRL*HCSCAATNCWI
Trigger: GATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
CDS CAA 90 bp AAGAACCCTGGCACCTGCTTGGCAAAGTCCACAATCTCCGTGACTTaGGGCTGGTCGGAGAAAGATCGTTTGTTGCACTGCAGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: KNPGTCLAKSTISVT*GWSEKDRLLHCSCA
Trigger: CGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS TCA 72 bp AGGATCAGTCTCCTGCCCCTCTTCCTTAATAGTGGGTaGCGTGGCGGAGGTACTGGGCTGAGGAGAACCATT +
Preference number: 6 (lower is better)
Translates to: RISLLPLFLNSG*RGGGTGLRRTI
Trigger: AATGGTTCTCCTCAGCCCAGTACCTCCGCCACGTCACCCACTATTAAGGAAGAGGGGCAGGAGACTGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000128600.3
ENSMUST00000167197.8
ENSMUST00000208366.2
CDS TCA 72 bp CACACGGCTGGGCTCCTGCACATTAGGCCGATCGGCTaGGAAGATGTTGATGGCGATAAGCAAGGCATACTC +
Preference number: 6 (lower is better)
Translates to: HTAGLLHIRPIG*EDVDGDKQGIL
Trigger: GAGTATGCCTTGCTTATCGCCATCAACATCTTCTCAGCCGATCGGCCTAATGTGCAGGAGCCCAGCCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CAA 72 bp TCCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTTGTaGCACTGCAGCTGCGCGGCAACTAACTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: SVTLGWSEKDRL*HCSCAATNCWI
Trigger: GATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS CAA 72 bp ATCTCCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCGGCAACTAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: ISVTLGWSEKDR*LHCSCAATNCW
Trigger: CCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS CAA 90 bp TCCACAATCTCCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTTGTaGCACTGCAGCTGCGCGGCAACTAACTGCTGGATCATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: STISVTLGWSEKDRL*HCSCAATNCWIISS
Trigger: GGAGCTGATGATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS TCA 72 bp ACCCTGGCACCTGCTTGGCAAAGTCCACAATCTCCGTaGCTTTGGGCTGGTCGGAGAAAGATCGTTTGTTGC +
Preference number: 6 (lower is better)
Translates to: TLAPAWQSPQSP*LWAGRRKIVCC
Trigger: GCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCAGGTGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS GCA 72 bp ACTTTGGGCTGGTCGGAGAAAGATCGTTTGTTGCACTaGAGCTGCGCGGCAACTAACTGCTGGATCATCAGC +
Preference number: 6 (lower is better)
Translates to: TLGWSEKDRLLH*SCAATNCWIIS
Trigger: GCTGATGATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CAA 72 bp GGCTCCTGCACATTAGGCCGATCGGCTGAGAAGATGTaGATGGCGATAAGCAAGGCATACTCTGCATCGTCC +
Preference number: 6 (lower is better)
Translates to: GSCTLGRSAEKM*MAISKAYSASS
Trigger: GGACGATGCAGAGTATGCCTTGCTTATCGCCATCAACATCTTCTCAGCCGATCGGCCTAATGTGCAGGAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000073488.12
ENSMUST00000107910.8
ENSMUST00000107911.8
ENSMUST00000107912.8
ENSMUST00000167197.8
ENSMUST00000208322.2
CDS CAA 72 bp GGCACCTGCTTGGCAAAGTCCACAATCTCCGTGACTTaGGGCTGGTCGGAGAAAGATCGTTTGTTGCACTGC +
Preference number: 6 (lower is better)
Translates to: GTCLAKSTISVT*GWSEKDRLLHC
Trigger: GCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS CAA 90 bp AAGTCCACAATCTCCGTGACTTTGGGCTGGTCGGAGAAAGATCGTTaGTTGCACTGCAGCTGCGCGGCAACTAACTGCTGGATCATCAGC +
Preference number: 6 (lower is better)
Translates to: KSTISVTLGWSEKDR*LHCSCAATNCWIIS
Trigger: GCTGATGATCCAGCAGTTAGTTGCCGCGCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2
CDS CCA 72 bp TGCTTGGCAAAGTCCACAATCTCCGTGACTTTGGGCTaGTCGGAGAAAGATCGTTTGTTGCACTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: CLAKSTISVTLG*SEKDRLLHCSC
Trigger: GCAGCTGCAGTGCAACAAACGATCTTTCTCCGACCAGCCCAAAGTCACGGAGATTGTGGACTTTGCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208322.2