Pregenerated sensors for NR1D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021775Ensembl transcript IDs: ENSMUST00000090543.6, ENSMUST00000225491.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATaGTCCCTACTGAATGACAGACACACCATCACTTTCCTCTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: VYPIKAIPTERKQQL*SLLNDRHTITFLFD Trigger: GTCAAAGAGGAAAGTGATGGTGTGTCTGTCATTCAGTAGGGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 90 bp | TACTTTGACAGTGGCAGAGCAAAATCCAAGTACATAAAGACCTCTTaGCTCTCAGTCTCCCTTACCACATTTCAGTCTTGTGGTACAACA | + |
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Preference number: 1 (lower is better) Translates to: YFDSGRAKSKYIKTS*LSVSLTTFQSCGTT Trigger: TGTTGTACCACAAGACTGAAATGTGGTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTACTTGGATTTTGCTCTGCCACTGTCAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 90 bp | TGTCTAAGTCCTCCTATATCGGCAATGTGCGCTAGATTTATACCATaGGGAGATCAAATGGTATTTTGGCTTTGGCAGATGAAAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: CLSPPISAMCARFIP*GDQMVFWLWQMKKS Trigger: AGACTTTTTCATCTGCCAAAGCCAAAATACCATTTGATCTCCCCATGGTATAAATCTAGCGCACATTGCCGATATAGGAGGACTTAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 90 bp | GAATGCTCATCTTTGGGCTACTTTCAAATACAGAAATACTACATGTaGCATATGAACTATGGATTTTGTTTCCCATTACTTCAGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: ECSSLGYFQIQKYYM*HMNYGFCFPLLQEE Trigger: TTCTTCCTGAAGTAATGGGAAACAAAATCCATAGTTCATATGCCACATGTAGTATTTCTGTATTTGAAAGTAGCCCAAAGATGAGCATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCCACCACCACGTACTTTaGCAGTGGCAGAGCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSHHHVL*QWQSKI Trigger: GATTTTGCTCTGCCACTGTCAAAGTACGTGGTGGTG...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCGTAGGGTACCCTACTTaGGCAGGAACCCTGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: AVYPIKAIPTERKQQLWSVGYPT*AGTLNK Trigger: TTTATTCAGGGTTCCTGCTCAAGTAGGGTACCCTAC...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATACAGCTACTGGTGACTaGCTACAGAGACAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GCWFHFRIRMLIFGLLSNTATGD*LQRQPR Trigger: CCTGGGCTGTCTCTGTAGTCAGTCACCAGTAGCTGT...ATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR TCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGCCCAACAGCTACTGGTaGCTGACTACAGAGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: YCKKIHLSELLSQLCFAMPNSYW*LTTETA Trigger: GGCTGTCTCTGTAGTCAGTCACCAGTAGCTGTTGGG...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGAGCAAAATCCAAGTACATAAAGACCTCTTGGCTCTCAGTCTCCCTTACCCTATATCGGCAATGTaGGCTAGATTTATACCATGG | + |
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Preference number: 2 (lower is better) Translates to: WQSKIQVHKDLLALSLPYPISAM*ARFIPW Trigger: CCATGGTATAAATCTAGCGCACATTGCCGATATAGG...GTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTACTTGGATTTTGCTCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCCACAAGGTAGAAAGCTaGAACACTGAAACATCTATT | + |
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Preference number: 2 (lower is better) Translates to: AVYPIKAIPTERKQQLWSHKVES*NTETSI Trigger: AATAGATGTTTCAGTGTTTCAGCTTTCTACCTTGTG...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR GCA 90 bp | TTAACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTGACTTGGCACAAACATaGCAACAGGTCACAAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LTLAIFPTMISKPVGRSLDLAQT*QQVTKF Trigger: AAACTTTGTGACCTGTTGGCATGTTTGTGCCAAGTC...AAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCTTTGAGGCAGAACATTaGGGACACTATCAATTATCA | + |
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Preference number: 2 (lower is better) Translates to: AVYPIKAIPTERKQQLWSFEAEH*GHYQLS Trigger: TGATAATTGATAGTGTCCCCAATGTTCTGCCTCAAA...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR TCA 90 bp | TTAACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTATAGTTTTCAGTATTTaGGGCAGAACATTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LTLAIFPTMISKPVGRSLIVFSI*GRTLGT Trigger: TGTCCCCAATGTTCTGCCTCAAATACTGAAAACTAT...AAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGAGCAAAATCCAAGTACATAAAGACCTCTTGGCTCTCAGTCTCCCTTACATGGTATTTTGGCTTTaGCAGATGAAAAAGTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: WQSKIQVHKDLLALSLPYMVFWL*QMKKSN Trigger: GTTAGACTTTTTCATCTGCCAAAGCCAAAATACCAT...GTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTACTTGGATTTTGCTCTGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCAACATTGTAAAGCAATaGTTATACATCAGCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: AVYPIKAIPTERKQQLWSNIVKQ*LYISSN Trigger: GTTGCTGCTGATGTATAACCATTGCTTTACAATGTT...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATCTTCTCCAGTCTAAGTaGAACACAGCTGATTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GCWFHFRIRMLIFGLLSNLLQSK*NTADWS Trigger: AGACCAATCAGCTGTGTTGCACTTAGACTGGAGAAG...ATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR GCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGCTCAACCAAAGAATGTaGTTGTATGAGGCTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: YCKKIHLSELLSQLCFAMLNQRM*LYEAAG Trigger: ACCAGCAGCCTCATACAAGCACATTCTTTGGTTGAG...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATATACATAAAGACCTCTTaGCTCTCAGTCTCCCTTACC | + |
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Preference number: 2 (lower is better) Translates to: AAGFILELECSSLGYFQIYIKTS*LSVSLT Trigger: GGTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTA...TATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAACGTAAGCAGCAGTTATaGTCCCTACTGAATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: YIAKRYIYLSFSHSFALQRKQQL*SLLNDR Trigger: TCTGTCATTCAGTAGGGACCATAACTGCTGCTTACG...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CAA 90 bp | AAACATAAAGTCAGGGTTAACATGTCACTTAATTCATACAGTACATaGTTAATTATCAACAGTACCCCACTGACTCAGAGGTTCTCTATC | + |
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Preference number: 2 (lower is better) Translates to: KHKVRVNMSLNSYST*LIINSTPLTQRFSI Trigger: GATAGAGAACCTCTGAGTCAGTGGGGTACTGTTGATAATTAACAATGTACTGTATGAATTAAGTGACATGTTAACCCTGACTTTATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CAA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCAACCAAAGAATGTGCTaGTATGAGGCTGCTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: YPTMSLLSLSVHSLEAGINQRMC*YEAAGF Trigger: GAAACCAGCAGCCTCATACAAGCACATTCTTTGGTT...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR TCA 72 bp | TACCCACTGAACGTAAGCAGCAGTTATGGTCCCTACTaGATGACAGACACACCATCACTTTCCTCTTTGACA | + |
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Preference number: 3 (lower is better) Translates to: YPLNVSSSYGPY*MTDTPSLSSLT Trigger: TGTCAAAGAGGAAAGTGATGGTGTGTCTGTCATTCAGTAGGGACCATAACTGCTGCTTACGTTCAGTGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR TCA 72 bp | ACCTGGAATATGTGTTTATCAGTAGGGTACCCTACTTaGGCAGGAACCCTGAATAAATTGGTGTGGACTGTC | + |
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Preference number: 3 (lower is better) Translates to: TWNMCLSVGYPT*AGTLNKLVWTV Trigger: GACAGTCCACACCAATTTATTCAGGGTTCCTGCTCAAGTAGGGTACCCTACTGATAAACACATATTCCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 72 bp | CCTCCTATATCGGCAATGTGCGCTAGATTTATACCATaGGGAGATCAAATGGTATTTTGGCTTTGGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: PPISAMCARFIP*GDQMVFWLWQM Trigger: CATCTGCCAAAGCCAAAATACCATTTGATCTCCCCATGGTATAAATCTAGCGCACATTGCCGATATAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 72 bp | ATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATaGTCCCTACTGAATGACAGACACACCATCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: IKAIPTERKQQL*SLLNDRHTITF Trigger: GAAAGTGATGGTGTGTCTGTCATTCAGTAGGGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 72 bp | GTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTaGAATCCTCTCATATCACATACTAAAAGCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: VSPFPQCSLSRS*NPLISHTKSTG Trigger: TCCTGTGCTTTTAGTATGTGATATGAGAGGATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATAGGAACCCTGAATAAATaGGTGTGGACTGTCAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: AAGFILELECSSLGYFQIGTLNK*VWTVKV Trigger: AACTTTGACAGTCCACACCAATTTATTCAGGGTTCC...TATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CAA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGACCTTCAACTGCAGATaGTATCAAAGATGCATCCTA | + |
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Preference number: 3 (lower is better) Translates to: YCKKIHLSELLSQLCFAMTFNCR*YQRCIL Trigger: TAGGATGCATCTTTGATACAATCTGCAGTTGAAGGT...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CAA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGCATGAATCTTTAACTTaGGCCATCTTTCCTACCATG | + |
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Preference number: 3 (lower is better) Translates to: YCKKIHLSELLSQLCFAMHESLT*AIFPTM Trigger: CATGGTAGGAAAGATGGCCAAAGTTAAAGATTCATG...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR TCA 72 bp | CCTCTACTAATAGCACAAGGTAGAAAGCTGAAACACTaGAACATCTATTACCTTCAACTGCAGATTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: PLLIAQGRKLKH*NIYYLQLQIVS Trigger: TGATACAATCTGCAGTTGAAGGTAATAGATGTTTCAGTGTTTCAGCTTTCTACCTTGTGCTATTAGTAGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATACCATCACTTTCCTCTTaGACAATAGGAGTTTATCTT | + |
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Preference number: 3 (lower is better) Translates to: AAGFILELECSSLGYFQIPSLSS*TIGVYL Trigger: AAGATAAACTCCTATTGTCAAAGAGGAAAGTGATGG...TATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR-3UTR CAA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATTAGAATGCTCATCTTaGGGCTACTTTCAAATACAG | + |
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Preference number: 3 (lower is better) Translates to: YIAKRYIYLSFSHSFALQLECSS*GYFQIQ Trigger: CTGTATTTGAAAGTAGCCCAAAGATGAGCATTCTAA...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| 3UTR CCA 72 bp | TATACATCAGCAGCAACAGGTAAAATGCACCTAATTTaGGTCCTTGACACCTCTTGTTTAAGTTTTATTGTA | + |
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Preference number: 3 (lower is better) Translates to: YTSAATGKMHLI*VLDTSCLSFIV Trigger: TACAATAAAACTTAAACAAGAGGTGTCAAGGACCCAAATTAGGTGCATTTTACCTGTTGCTGCTGATGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR TCA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCCAGGGGAAGTGGTTGTaGATCCCACTGCCACGATGG | + |
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Preference number: 4 (lower is better) Translates to: YPTMSLLSLSVHSLEAGIQGKWL*IPLPRW Trigger: CCATCGTGGCAGTGGGATTCACAACCACTTCCCCTG...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR TCA 90 bp | ACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTACTTCTGCAGGTGGCCACTaGACTGGGTGTTCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: TLAIFPTMISKPVGRSLTSAGGH*TGCSSW Trigger: CCATGATGAACACCCAGTTCAGTGGCCACCTGCAGA...AGTAAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTATCCCCTGCTCCCATTaGGTGCAGGTCATCCACACT | + |
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Preference number: 4 (lower is better) Translates to: TETAQDLALSSFLFPQYSIPCSH*VQVIHT Trigger: AGTGTGGATGACCTGCACTCAATGGGAGCAGGGGAT...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR GCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCTGTCCACTGAGATGTTaGTGCCTCTCACTACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AVYPIKAIPTERKQQLWSCPLRC*CLSLQG Trigger: CCCCTGTAGTGAGAGGCAGCAACATCTCAGTGGACA...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR TCA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCATCCGTTCTCCTCTCTaGGGTGGCATGCTCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSIRSPL*GGMLSD Trigger: ATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGAT...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTGCTAAGGTGTCATTCTaGAGGTGGCCACTGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: TETAQDLALSSFLFPQYSAKVSF*RWPLNW Trigger: CCAGTTCAGTGGCCACCTGCAGAATGACACCTTAGC...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR GCA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCCCTGCTCCCATTGAGTaGAGGTCATCCACACTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSPAPIE*RSSTLY Trigger: GTACAGTGTGGATGACCTGCACTCAATGGGAGCAGG...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CCA 90 bp | ACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTACTGTGTCATTCTGCAGGTaGCCACTGAACTGGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TLAIFPTMISKPVGRSLTVSFCR*PLNWVF Trigger: GAACACCCAGTTCAGTGGCCACCTGCAGAATGACAC...AGTAAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTTCATGTCCAGACTTCTaGGGGTCCACATATGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: TETAQDLALSSFLFPQYSSCPDF*GSTYGD Trigger: GTCTCCATATGTGGACCCTCAGAAGTCTGGACATGA...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR TCA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCTCATTTCCTCATCACTaGGCTGGAGGGCATTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSSFPHH*AGGHSA Trigger: AGCTGAATGCCCTCCAGCTCAGTGATGAGGAAATGA...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR GCA 90 bp | TGGCAGAGCAAAATCCAAGTACATAAAGACCTCTTGGCTCTCAGTCTCCCTTACCTCTCTGAGGTGGCATaGTCTCAGATGAGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: WQSKIQVHKDLLALSLPYLSEVA*SQMSFL Trigger: GAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAG...GTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTACTTGGATTTTGCTCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR GCA 90 bp | TTAACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTCCACTGAGATGTTGCTaGCTCTCACTACAGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LTLAIFPTMISKPVGRSLPLRCC*LSLQGK Trigger: CTTCCCCTGTAGTGAGAGGCAGCAACATCTCAGTGG...AAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CCA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCGCTATTTGGAGAAGATaGAACAGACGAGGACGAGGA | + |
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Preference number: 4 (lower is better) Translates to: YPTMSLLSLSVHSLEAGIAIWRR*NRRGRG Trigger: TCCTCGTCCTCGTCTGTTCCATCTTCTCCAAATAGC...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAAGCTCCAGCTGGGACTTaGGCCGCAGCTGTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQAPAGT*AAAVPE Trigger: CTCAGGAACAGCTGCGGCCCAAGTCCCAGCTGGAGC...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGTCAGAACCCTCACTGTaGCAAGAGGCAGGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCKKIHLSELLSQLCFAMSEPSL*QEAGLE Trigger: CTCCAGCCCTGCCTCTTGTCACAGTGAGGGTTCTGA...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TTAACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTCTTTGTACTGTCCACTaGGATGTTGCTGCCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLAIFPTMISKPVGRSLLCTVH*DVAASH Trigger: GTGAGAGGCAGCAACATCTCAGTGGACAGTACAAAG...AAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCCCAGAACAACTGCTGTaGACAAGCTCATTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPTMSLLSLSVHSLEAGIPEQLL*TSSFPH Trigger: ATGAGGAAATGAGCTTGTTCACAGCAGTTGTTCTGG...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCCAGGAGCACTGGTTTTaGCTGTTTTCACAGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVYPIKAIPTERKQQLWSQEHWF*LFSQDN Trigger: ATTGTCCTGTGAAAACAGGCAAAACCAGTGCTCCTG...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCCATACAGTGTCCATTTaGAATACAAACGGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVYPIKAIPTERKQQLWSHTVSI*NTNGMA Trigger: GGCCATGCCGTTTGTATTGCAAATGGACACTGTATG...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCAACGGCATGGCCGTTTaGGTAATGCATTATGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPTMSLLSLSVHSLEAGINGMAV*VMHYVP Trigger: AGGAACATAATGCATTACCCAAACGGCCATGCCGTT...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TTAACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTTCCTCATCACTGAGCTaGAGGGCATTCAGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLAIFPTMISKPVGRSLSSSLS*RAFSFS Trigger: TGAGAAGCTGAATGCCCTCCAGCTCAGTGATGAGGA...AAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTATATCCCATAAAAGCCATACCCACTGAACGTAAGCAGCAGTTATGGTCCCAGAAGGAGTGTTTTTaGTGTTTTCTTGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVYPIKAIPTERKQQLWSQKECF*CFLAPA Trigger: AGCTGGAGCAAGAAAACATCAAAAACACTCCTTCTG...GGACCATAACTGCTGCTTACGTTCAGTGGGTATGGCTTTTATGGGATATACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCTTTCTGTTCTCAGTCTaGGAACATCCACCTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSFLFSV*EHPPTG Trigger: TCCAGTAGGTGGATGTTCTCAGACTGAGAACAGAAA...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCTACCACTTAGAAAGGTaGCAGTCCGTTCCTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSYHLER*QSVPLH Trigger: ATGCAAAGGAACGGACTGTCACCTTTCTAAGTGGTA...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTTCCTCCCTCCAGTGTTaGACAGGTAACTATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TETAQDLALSSFLFPQYSSSLQC*TGNYFC Trigger: ACAGAAATAGTTACCTGTGCAACACTGGAGGGAGGA...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTGCCAGGAATCCTCTTTaGAAATTCCACCACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TETAQDLALSSFLFPQYSARNPL*KFHHLF Trigger: AAAGAGGTGGTGGAATTTGCAAAGAGGATTCCTGGC...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATTCCATAGTGGAATCCTaGTGCCACATCCCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCWFHFRIRMLIFGLLSNSIVES*CHIPTD Trigger: GTCTGTGGGGATGTGGCATCAGGATTCCACTATGGA...ATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTACTTACTGGATGTTTTGCTaGATGCTCCTCCGAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLAIFPTMISKPVGRSLTYWMFC*MLLRKK Trigger: TTTCTTTCGGAGGAGCATTCAGCAAAACATCCAGTA...AGTAAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTTCCTGTTCATCCTCATaGTGGAACAGTTCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TETAQDLALSSFLFPQYSSCSSS*WNSSHS Trigger: AGAATGAGAACTGTTCCATCATGAGGATGAACAGGA...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTACTAAGCCTCCACTGAGTTaGCATTTTCAATTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLAIFPTMISKPVGRSLTKPPLS*HFQFQI Trigger: GATCTGGAATTGAAAATGTCAACTCAGTGGAGGCTT...AGTAAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATTTCTTAAAGCGGCACTaGTGGCACCGGTTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCWFHFRIRMLIFGLLSNFLKRH*WHRFLF Trigger: GAACAGGAACCGGTGCCAGCAGTGCCGCTTTAAGAA...ATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATGACGAGGACGAGGACTaGAAGCTATTCTCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GCWFHFRIRMLIFGLLSNDEDED*KLFSEP Trigger: GGGTTCTGAGAATAGCTTCCAGTCCTCGTCCTCGTC...ATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGGCTGGTAGTGCTGACTaGTCATGCTGTTCTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCKKIHLSELLSQLCFAMAGSAD*SCCSAK Trigger: CTTAGCAGAACAGCATGATCAGTCAGCACTACCAGC...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATAGGTGGCCACTGAACTaGGTGTTCATCATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCWFHFRIRMLIFGLLSNRWPLN*VFIMVF Trigger: GAAGACCATGATGAACACCCAGTTCAGTGGCCACCT...ATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | TGGCAGAGCAAAATCCAAGTACATAAAGACCTCTTGGCTCTCAGTCTCCCTTACGTCTTCATTGCACTTTaGATTTCAATTAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQSKIQVHKDLLALSLPYVFIAL*ISISIL Trigger: GAGAATGCTAATTGAAATGCAAAGTGCAATGAAGAC...GTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTACTTGGATTTTGCTCTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATACGGATGAGTGTTTCCTaGAAAGCCTCCACTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGFILELECSSLGYFQIRMSVS*KASTEL Trigger: CAACTCAGTGGAGGCTTTGCAGGAAACACTCATCCG...TATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGAGAAAGGTATCCTTGTaGGCTCTGGTCACCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: YCKKIHLSELLSQLCFAMRKVSL*ALVTIP Trigger: TGGTATGGTGACCAGAGCCCACAAGGATACCTTTCT...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGTTTGTCATTCCACTGTaGCTCTTAGTCATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YCKKIHLSELLSQLCFAMFVIPL*LLVMPG Trigger: TCCTGGCATGACTAAGAGTCACAGTGGAATGACAAA...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGGCATGCTCTCAGATaGGTTTTCTCGATGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQWHALR*VFSMFL Trigger: CAGGAACATCGAGAAAACTCATCTGAGAGCATGCCA...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATCATGCCAGGAGCACTaGTTTTGCCTGTTTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQSCQEH*FCLFSQ Trigger: CTGTGAAAACAGGCAAAACCAGTGCTCCTGGCATGA...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAACTGAGGGTCCACATATaGAGACTTGCTCATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQLRVHI*RLAHRT Trigger: TGTCCTATGAGCAAGTCTCCATATGTGGACCCTCAG...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TTAACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTGAGGCCTCATTTGGATaGTTTTTCATTATTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLAIFPTMISKPVGRSLEASFG*FFIIKV Trigger: GACCTTAATAATGAAAAACCATCCAAATGAGGCCTC...AAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAAGGATGTTTTGCTGAATaGTCCTCCGAAAGAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQGCFAE*SSERNP Trigger: AGGGTTTCTTTCGGAGGAGCATTCAGCAAAACATCC...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAACAGCTTTTAACAGATTaGCCTGATCATGCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQQLLTD*PDHAET Trigger: TGTCTCAGCATGATCAGGTCAATCTGTTAAAAGCTG...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGAGAACATCCACCTACTaGAATTCTATCACAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCKKIHLSELLSQLCFAMRTSTY*NSITDS Trigger: AGAGTCTGTGATAGAATTCCAGTAGGTGGATGTTCT...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGGTTTCATTTTAGAATTAGAATGCTCATCTTTGGGCTACTTTCAAATATGGGGTAAAACTCATTaGAAATTCTTCCCAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGFILELECSSLGYFQIWGKTH*KFFPDF Trigger: GAAATCTGGGAAGAATTTTCAATGAGTTTTACCCCA...TATTTGAAAGTAGCCCAAAGATGAGCATTCTAATTCTAAAATGAAACCAGCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR GCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAAAATCACTTCCTCCTTTaGAAAATCAGAAGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQNHFLL*KIRRSV Trigger: AACACTCCTTCTGATTTTGCAAAGGAGGAAGTGATT...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS-3UTR CCA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATTTGAGTATAAGCACTaGAGAAGTTCATACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YIAKRYIYLSFSHSFALQFEYKH*RSSYSV Trigger: GACACTGTATGAACTTCTCCAGTGCTTATACTCAAA...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS TCA 90 bp | GGCCGTTTGGGTAATGCATTATGTTCCTCCCTTTGTACTGTCCACTaGGATGTTGCTGCCTCTCACTACAGGGGAAGTGGTTGTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRLGNALCSSLCTVH*DVAASHYRGSGCES Trigger: GGATTCACAACCACTTCCCCTGTAGTGAGAGGCAGCAACATCTCAGTGGACAGTACAAAGGGAGGAACATAATGCATTACCCAAACGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS CCA 90 bp | CTTGGGATTGCCGTTGGCATCACAGTTAGAGCTATTTGGAGAAGATaGAACAGACGAGGACGAGGACTGGAAGCTATTCTCAGAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGIAVGITVRAIWRR*NRRGRGLEAILRTL Trigger: GAGGGTTCTGAGAATAGCTTCCAGTCCTCGTCCTCGTCTGTTCCATCTTCTCCAAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS CCA 90 bp | ATCAGCGTTCTTGGGATTGCCGTTGGCATCACAGTTAGAGCTATTTaGAGAAGATGGAACAGACGAGGACGAGGACTGGAAGCTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISVLGIAVGITVRAI*RRWNRRGRGLEAIL Trigger: GAGAATAGCTTCCAGTCCTCGTCCTCGTCTGTTCCATCTTCTCCAAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAACGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS GCA 90 bp | CTGAACTCAAACATAGAGCTGAGCAGATCCCCTGCTCCCATTGAGTaGAGGTCATCCACACTGTACTTCTTACCACTTAGAAAGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LNSNIELSRSPAPIE*RSSTLYFLPLRKVT Trigger: TGTCACCTTTCTAAGTGGTAAGAAGTACAGTGTGGATGACCTGCACTCAATGGGAGCAGGGGATCTGCTCAGCTCTATGTTTGAGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
||
| CDS CCA 90 bp | AAATTCTTCCCAGATTTCATGTCCAGACTTCTGAGGGTCCACATATaGAGACTTGCTCATAGGACACACCAGATGCATCCTCCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KFFPDFMSRLLRVHI*RLAHRTHQMHPPSS Trigger: ACTGGAGGGAGGATGCATCTGGTGTGTCCTATGAGCAAGTCTCCATATGTGGACCCTCAGAAGTCTGGACATGAAATCTGGGAAGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS CCA 90 bp | ACCAGAACAACTGCTGTGAACAAGCTCATTTCCTCATCACTGAGCTaGAGGGCATTCAGCTTCTCACTGAACTCAAACATAGAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRTTAVNKLISSSLS*RAFSFSLNSNIELS Trigger: GCTCAGCTCTATGTTTGAGTTCAGTGAGAAGCTGAATGCCCTCCAGCTCAGTGATGAGGAAATGAGCTTGTTCACAGCAGTTGTTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
||
| CDS-3UTR CAA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCCCAGGAGCACTGGTTTaGCCTGTTTTCACAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: YPTMSLLSLSVHSLEAGIPGALV*PVFTGQ Trigger: TTGTCCTGTGAAAACAGGCAAAACCAGTGCTCCTGG...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS TCA 90 bp | GTTCCTGGGAATCCGTTCTCCTCTCTGAGGTGGCATGCTCTCAGATaGGTTTTCTCGATGTTCCTGATTATACAGAAAGGTATCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPGNPFSSLRWHALR*VFSMFLIIQKGILV Trigger: CACAAGGATACCTTTCTGTATAATCAGGAACATCGAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATTCCCAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS GCA 90 bp | ATTGCTCCATGTTCCTGGGAATCCGTTCTCCTCTCTGAGGTGGCATaGTCTCAGATGAGTTTTCTCGATGTTCCTGATTATACAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IAPCSWESVLLSEVA*SQMSFLDVPDYTER Trigger: CCTTTCTGTATAATCAGGAACATCGAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATTCCCAGGAACATGGAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS GCA 90 bp | GATGTTGCTGCCTCTCACTACAGGGGAAGTGGTTGTGAATCCCACTaGCACGATGGTCTTGATTTAAATTATATTGCTCCATGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DVAASHYRGSGCESH*HDGLDLNYIAPCSW Trigger: CCAGGAACATGGAGCAATATAATTTAAATCAAGACCATCGTGGCAGTGGGATTCACAACCACTTCCCCTGTAGTGAGAGGCAGCAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
||
| CDS CCA 90 bp | CACTGCCACGATGGTCTTGATTTAAATTATATTGCTCCATGTTCCTaGGAATCCGTTCTCCTCTCTGAGGTGGCATGCTCTCAGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCHDGLDLNYIAPCS*ESVLLSEVACSQMS Trigger: ACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATTCCCAGGAACATGGAGCAATATAATTTAAATCAAGACCATCGTGGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCAAACGGCATGGCCGTTaGGGTAATGCATTATGTTCC | + |
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Preference number: 5 (lower is better) Translates to: YPTMSLLSLSVHSLEAGIKRHGR*GNALCS Trigger: GGAACATAATGCATTACCCAAACGGCCATGCCGTTT...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | ACAGAGACAGCCCAGGACCTGGCGCTAAGTTCTTTTCTATTTCCACAATATAGTTACAGAAAGGTATCCTaGTGGGCTCTGGTCACCATA | + |
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Preference number: 5 (lower is better) Translates to: TETAQDLALSSFLFPQYSYRKVS*WALVTI Trigger: TATGGTGACCAGAGCCCACAAGGATACCTTTCTGTA...ACTATATTGTGGAAATAGAAAAGAACTTAGCGCCAGGTCCTGGGCTGTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CCA 90 bp | GAAGTTCATACAGTGTCCATTTGCAATACAAACGGCATGGCCGTTTaGGTAATGCATTATGTTCCTCCCTTTGTACTGTCCACTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: EVHTVSICNTNGMAV*VMHYVPPFVLSTEM Trigger: CATCTCAGTGGACAGTACAAAGGGAGGAACATAATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TGGCAGAGCAAAATCCAAGTACATAAAGACCTCTTGGCTCTCAGTCTCCCTTACCTTATACTGGATGTTTaGCTGAATGCTCCTCCGAAA | + |
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Preference number: 5 (lower is better) Translates to: WQSKIQVHKDLLALSLPYLILDV*LNAPPK Trigger: TTTCGGAGGAGCATTCAGCAAAACATCCAGTATAAG...GTAAGGGAGACTGAGAGCCAAGAGGTCTTTATGTACTTGGATTTTGCTCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAAGATCCCCTGCTCCCATaGAGTGCAGGTCATCCACAC | + |
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Preference number: 5 (lower is better) Translates to: YIAKRYIYLSFSHSFALQDPLLP*SAGHPH Trigger: GTGTGGATGACCTGCACTCAATGGGAGCAGGGGATC...TTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 90 bp | AGGTGGCCACTGAACTGGGTGTTCATCATGGTCTTCATTGCACTTTaGATTTCAATTAGCATTCTCTGTTTTTCACGCTTAGGAATTCGG | + |
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Preference number: 5 (lower is better) Translates to: RWPLNWVFIMVFIAL*ISISILCFSRLGIR Trigger: CCGAATTCCTAAGCGTGAAAAACAGAGAATGCTAATTGAAATGCAAAGTGCAATGAAGACCATGATGAACACCCAGTTCAGTGGCCACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CCA 90 bp | TTTCTCGATGTTCCTGATTATACAGAAAGGTATCCTTGTGGGCTCTaGTCACCATACCAATCACTTCCTCCTTTGCAAAATCAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: FLDVPDYTERYPCGL*SPYQSLPPLQNQKE Trigger: CTCCTTCTGATTTTGCAAAGGAGGAAGTGATTGGTATGGTGACCAGAGCCCACAAGGATACCTTTCTGTATAATCAGGAACATCGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | ACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTACTTCAGAAGGAGTGTTTTaGATGTTTTCTTGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TLAIFPTMISKPVGRSLTSEGVF*MFSCSS Trigger: GCTGGAGCAAGAAAACATCAAAAACACTCCTTCTGA...AGTAAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | ACTTTGGCCATCTTTCCTACCATGATCTCTAAGCCTGTAGGTAGGTCACTTACTCAATCACTTCCTCCTTaGCAAAATCAGAAGGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: TLAIFPTMISKPVGRSLTQSLPP*QNQKEC Trigger: ACACTCCTTCTGATTTTGCAAAGGAGGAAGTGATTG...AGTAAGTGACCTACCTACAGGCTTAGAGATCATGGTAGGAAAGATGGCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | CTTGGCACAAACATGCCAACAGGTCACAAAGTTTTCCTAAACAAAACCTCCTCCATTATGTTCCTCCCTTaGTACTGTCCACTGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: LGTNMPTGHKVFLNKTSSIMFLP*YCPLRC Trigger: ACATCTCAGTGGACAGTACAAAGGGAGGAACATAAT...GGAGGAGGTTTTGTTTAGGAAAACTTTGTGACCTGTTGGCATGTTTGTGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCAAAGCCTCCACTGAGTaGACATTTTCAATTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: YPTMSLLSLSVHSLEAGIKASTE*TFSIPD Trigger: ATCTGGAATTGAAAATGTCAACTCAGTGGAGGCTTT...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATCCTACGATGTCTCTCCTTTCCCTCAGTGTTCACTCTCTAGAAGCTGGAATCTCCTCAGAGTGCATGTaGTTTAAAGATCGAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: YPTMSLLSLSVHSLEAGISSECM*FKDRRS Trigger: AGATCTTCGATCTTTAAACAACATGCACTCTGAGGA...GATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACATCGTAGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 90 bp | GACTCTTTGAGTATAAGCACTGGAGAAGTTCATACAGTGTCCATTTaGAATACAAACGGCATGGCCGTTTGGGTAATGCATTATGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: DSLSISTGEVHTVSI*NTNGMAVWVMHYVP Trigger: AGGAACATAATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACTTCTCCAGTGCTTATACTCAAAGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CCA 90 bp | ATCCACCTACTGGAATTCTATCACAGACTCTTTGAGTATAAGCACTaGAGAAGTTCATACAGTGTCCATTTGCAATACAAACGGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: IHLLEFYHRLFEYKH*RSSYSVHLQYKRHG Trigger: GCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACTTCTCCAGTGCTTATACTCAAAGAGTCTGTGATAGAATTCCAGTAGGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 90 bp | TGGTTTTTCATTATTAAGGTCCTTAGTGCACGGATGAGTGTTTCCTaGAAAGCCTCCACTGAGTTGACATTTTCAATTCCAGATCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: WFFIIKVLSARMSVS*KASTELTFSIPDRS Trigger: AGATCGATCTGGAATTGAAAATGTCAACTCAGTGGAGGCTTTGCAGGAAACACTCATCCGTGCACTAAGGACCTTAATAATGAAAAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
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| CDS CCA 90 bp | GCACAGGTAACTATTTCTGTTCTCAGTCTGAGAACATCCACCTACTaGAATTCTATCACAGACTCTTTGAGTATAAGCACTGGAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQVTISVLSLRTSTY*NSITDSLSISTGEV Trigger: AACTTCTCCAGTGCTTATACTCAAAGAGTCTGTGATAGAATTCCAGTAGGTGGATGTTCTCAGACTGAGAACAGAAATAGTTACCTGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGTTCTTGGGATTGCCGTaGGCATCACAGTTAGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: YCKKIHLSELLSQLCFAMFLGLP*ASQLEL Trigger: TAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAA...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGTCCACATATGGAGACTaGCTCATAGGACACACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YCKKIHLSELLSQLCFAMSTYGD*LIGHTR Trigger: TCTGGTGTGTCCTATGAGCAAGTCTCCATATGTGGA...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS-3UTR CAA 90 bp | TATTGCAAAAAGATACATCTATCTGAGCTTCTCTCACAGCTTTGCTTTGCAATGTCTATCACAGACTCTTaGAGTATAAGCACTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: YCKKIHLSELLSQLCFAMSITDS*SISTGE Trigger: TTCTCCAGTGCTTATACTCAAAGAGTCTGTGATAGA...CATTGCAAAGCAAAGCTGTGAGAGAAGCTCAGATAGATGTATCTTTTTGCAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS TCA 72 bp | CTCAAACATAGAGCTGAGCAGATCCCCTGCTCCCATTaGGTGCAGGTCATCCACACTGTACTTCTTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: LKHRAEQIPCSH*VQVIHTVLLTT Trigger: AGTGGTAAGAAGTACAGTGTGGATGACCTGCACTCAATGGGAGCAGGGGATCTGCTCAGCTCTATGTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
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| CDS CCA 72 bp | GCCGTTGGCATCACAGTTAGAGCTATTTGGAGAAGATaGAACAGACGAGGACGAGGACTGGAAGCTATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVGITVRAIWRR*NRRGRGLEAIL Trigger: GAGAATAGCTTCCAGTCCTCGTCCTCGTCTGTTCCATCTTCTCCAAATAGCTCTAACTGTGATGCCAACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS TCA 72 bp | TATTGCTCCATGTTCCTGGGAATCCGTTCTCCTCTCTaGGGTGGCATGCTCTCAGATGAGTTTTCTCGATGT | + |
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Preference number: 6 (lower is better) Translates to: YCSMFLGIRSPL*GGMLSDEFSRC Trigger: ACATCGAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATTCCCAGGAACATGGAGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 72 bp | AACATAGAGCTGAGCAGATCCCCTGCTCCCATTGAGTaGAGGTCATCCACACTGTACTTCTTACCACTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: NIELSRSPAPIE*RSSTLYFLPLR Trigger: TCTAAGTGGTAAGAAGTACAGTGTGGATGACCTGCACTCAATGGGAGCAGGGGATCTGCTCAGCTCTATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
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| CDS CCA 72 bp | CCAGATTTCATGTCCAGACTTCTGAGGGTCCACATATaGAGACTTGCTCATAGGACACACCAGATGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PDFMSRLLRVHI*RLAHRTHQMHP Trigger: AGGATGCATCTGGTGTGTCCTATGAGCAAGTCTCCATATGTGGACCCTCAGAAGTCTGGACATGAAATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 90 bp | CGGTCACTCTTCAGAACACCATCGATGCTAGAGATATCAGCGTTCTaGGGATTGCCGTTGGCATCACAGTTAGAGCTATTTGGAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RSLFRTPSMLEISAF*GLPLASQLELFGED Trigger: ATCTTCTCCAAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAACGCTGATATCTCTAGCATCGATGGTGTTCTGAAGAGTGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS TCA 72 bp | GGTGGCATGCTCTCAGATGAGTTTTCTCGATGTTCCTaGTTATACAGAAAGGTATCCTTGTGGGCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGMLSDEFSRCS*LYRKVSLWALV Trigger: GACCAGAGCCCACAAGGATACCTTTCTGTATAATCAGGAACATCGAGAAAACTCATCTGAGAGCATGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 72 bp | TGTTCCTGGGAATCCGTTCTCCTCTCTGAGGTGGCATaGTCTCAGATGAGTTTTCTCGATGTTCCTGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: CSWESVLLSEVA*SQMSFLDVPDY Trigger: ATAATCAGGAACATCGAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATTCCCAGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 90 bp | CTCTTCAGAACACCATCGATGCTAGAGATATCAGCGTTCTTGGGATaGCCGTTGGCATCACAGTTAGAGCTATTTGGAGAAGATGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: LFRTPSMLEISAFLG*PLASQLELFGEDGT Trigger: TGTTCCATCTTCTCCAAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAACGCTGATATCTCTAGCATCGATGGTGTTCTGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CCA 72 bp | ACAGTGTCCATTTGCAATACAAACGGCATGGCCGTTTaGGTAATGCATTATGTTCCTCCCTTTGTACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVSICNTNGMAV*VMHYVPPFVLS Trigger: GGACAGTACAAAGGGAGGAACATAATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 72 bp | TCGATGCTAGAGATATCAGCGTTCTTGGGATTGCCGTaGGCATCACAGTTAGAGCTATTTGGAGAAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: SMLEISAFLGLP*ASQLELFGEDG Trigger: TCCATCTTCTCCAAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAACGCTGATATCTCTAGCATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 72 bp | ACACCATCGATGCTAGAGATATCAGCGTTCTTGGGATaGCCGTTGGCATCACAGTTAGAGCTATTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TPSMLEISAFLG*PLASQLELFGE Trigger: TTCTCCAAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAACGCTGATATCTCTAGCATCGATGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS TCA 72 bp | AGTAGAACCATGCCACTAAATTTTGTCATTCCACTGTaGCTCTTAGTCATGCCAGGAGCACTGGTTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRTMPLNFVIPL*LLVMPGALVLP Trigger: AGGCAAAACCAGTGCTCCTGGCATGACTAAGAGTCACAGTGGAATGACAAAATTTAGTGGCATGGTTCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS TCA 72 bp | AATCCGTTCTCCTCTCTGAGGTGGCATGCTCTCAGATaGGTTTTCTCGATGTTCCTGATTATACAGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: NPFSSLRWHALR*VFSMFLIIQKG Trigger: ACCTTTCTGTATAATCAGGAACATCGAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 72 bp | TTCAATTCCAGATCGATCTGCAGATACCAGAACAACTaGTGTGAACAAGCTCATTTCCTCATCACTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FNSRSICRYQNN*CEQAHFLITEL Trigger: CAGCTCAGTGATGAGGAAATGAGCTTGTTCACAGCAGTTGTTCTGGTATCTGCAGATCGATCTGGAATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
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| CDS CAA 72 bp | TTCAGAACACCATCGATGCTAGAGATATCAGCGTTCTaGGGATTGCCGTTGGCATCACAGTTAGAGCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: FRTPSMLEISAF*GLPLASQLELF Trigger: AAATAGCTCTAACTGTGATGCCAACGGCAATCCCAAGAACGCTGATATCTCTAGCATCGATGGTGTTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 72 bp | TACAGTGTCCATTTGCAATACAAACGGCATGGCCGTTaGGGTAATGCATTATGTTCCTCCCTTTGTACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YSVHLQYKRHGR*GNALCSSLCTV Trigger: GACAGTACAAAGGGAGGAACATAATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 72 bp | GAGTATAAGCACTGGAGAAGTTCATACAGTGTCCATTaGCAATACAAACGGCATGGCCGTTTGGGTAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: EYKHWRSSYSVH*QYKRHGRLGNA Trigger: TGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACTTCTCCAGTGCTTATACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS TCA 72 bp | ATTGAAAATTCTTCCCAGATTTCATGTCCAGACTTCTaGGGGTCCACATATGGAGACTTGCTCATAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: IENSSQISCPDF*GSTYGDLLIGH Trigger: GTGTCCTATGAGCAAGTCTCCATATGTGGACCCTCAGAAGTCTGGACATGAAATCTGGGAAGAATTTTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 72 bp | AGTATAAGCACTGGAGAAGTTCATACAGTGTCCATTTaGAATACAAACGGCATGGCCGTTTGGGTAATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SISTGEVHTVSI*NTNGMAVWVMH Trigger: ATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACTTCTCCAGTGCTTATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CCA 72 bp | GTTCCTGATTATACAGAAAGGTATCCTTGTGGGCTCTaGTCACCATACCAATCACTTCCTCCTTTGCAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VPDYTERYPCGL*SPYQSLPPLQN Trigger: ATTTTGCAAAGGAGGAAGTGATTGGTATGGTGACCAGAGCCCACAAGGATACCTTTCTGTATAATCAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 90 bp | AGACTCTTTGAGTATAAGCACTGGAGAAGTTCATACAGTGTCCATTaGCAATACAAACGGCATGGCCGTTTGGGTAATGCATTATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLFEYKHWRSSYSVH*QYKRHGRLGNALCS Trigger: GGAACATAATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACTTCTCCAGTGCTTATACTCAAAGAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS GCA 72 bp | ATTATTAAGGTCCTTAGTGCACGGATGAGTGTTTCCTaGAAAGCCTCCACTGAGTTGACATTTTCAATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IIKVLSARMSVS*KASTELTFSIP Trigger: TGGAATTGAAAATGTCAACTCAGTGGAGGCTTTGCAGGAAACACTCATCCGTGCACTAAGGACCTTAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090543.6 ENSMUST00000225491.2 |
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| CDS CAA 72 bp | AGAACATCCACCTACTGGAATTCTATCACAGACTCTTaGAGTATAAGCACTGGAGAAGTTCATACAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RTSTYWNSITDS*SISTGEVHTVS Trigger: GGACACTGTATGAACTTCTCCAGTGCTTATACTCAAAGAGTCTGTGATAGAATTCCAGTAGGTGGATGTTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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| CDS CAA 90 bp | CTCAGTCTGAGAACATCCACCTACTGGAATTCTATCACAGACTCTTaGAGTATAAGCACTGGAGAAGTTCATACAGTGTCCATTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSLRTSTYWNSITDS*SISTGEVHTVSICN Trigger: ATTGCAAATGGACACTGTATGAACTTCTCCAGTGCTTATACTCAAAGAGTCTGTGATAGAATTCCAGTAGGTGGATGTTCTCAGACTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090543.6 |
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