Pregenerated sensors for NR1D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020889Ensembl transcript IDs: ENSMUST00000064941.7
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTGAGACAGGAACAGAACAAATCGAGGGGCCAGAGGAGGGTGGAGAGAGCAAGAGCATGGCGGTGGGGGTaGGGGAAGAGTTATTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: LRQEQNKSRGQRRVERARAWRWG*GKSYLQ Trigger: TTGTAAATAACTCTTCCCCCACCCCCACCGCCATGC...TCTTGCTCTCTCCACCCTCCTCTGGCCCCTCGATTTGTTCTGTTCCTGTCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGGGCAGCGGTTGCGATTaGTGCGAACGATGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAEFDSVQGGSGRRPAGRGSGCD*CERWSS Trigger: ACTGCTCCATCGTTCGCATCAATCGCAACCGCTGCC...CCGCCCGGCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | AGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCAAGCACCACCGCGGTaGATAGGCCCAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSAEFDSVQGGSGRRPAGQAPPR*IGPAPP Trigger: AGGAGGAGCTGGGCCTATTCACCGCGGTGGTGCTTG...CCCGGCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGAAGTTCATGGCGCTCTaGATCTCGGCAAGCATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAEFDSVQGGSGRRPAGRKFMAL*ISASIR Trigger: ACGGATGCTTGCCGAGATGCAGAGCGCCATGAACTT...CCGCCCGGCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGGGGCTACCTGATGCATaGTTGGCATTGAAGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SAEFDSVQGGSGRRPAGRGLPDA*LALKLP Trigger: TGGTAACTTCAATGCCAATCATGCATCAGGTAGCCC...CCGCCCGGCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGTCGGCAAGCATCCGTTaGTTCTCTCTCTTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSAEFDSVQGGSGRRPAGSASIR*FSLLGM Trigger: CATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGA...CCCGGCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | GATTTGAGACAGGAACAGAACAAATCGAGGGGCCAGAGGAGGGTGGAGAGAGCAGGTTGGTGGCAGCTGTaGTGGGTGGGGCCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLRQEQNKSRGQRRVERAGWWQL*WVGPEG Trigger: GCCTTCTGGCCCCACCCACCACAGCTGCCACCAACC...TGCTCTCTCCACCCTCCTCTGGCCCCTCGATTTGTTCTGTTCCTGTCTCAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGGTCGCCCATGCCCATaGCACCGAGCTCCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAAGRPCP*HRAPAD Trigger: GTCTGCAGGAGCTCGGTGCCATGGGCATGGGCGACC...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGTGCTTGTGCCCTTGCTaGGGGACACTCGGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAACLCPC*GTLGCC Trigger: ACAGCAGCCGAGTGTCCCCCAGCAAGGGCACAAGCA...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGAAGAGTTATTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGACAGGGCTGGGAGACCTaGGTGGTGTCAGCTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGEELFTRRLRGPEAHLGQGWET*VVSAVV Trigger: CACAACAGCTGACACCACCCAGGTCTCCCAGCCCTG...TCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAATAACTCTTCCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGTCACATCCTCCATGGTaGGCTCAGGGCTGGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAASHPPW*AQGWET Trigger: GGTCTCCCAGCCCTGAGCCCACCATGGAGGATGTGA...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAGACAGGAACAGAACAAATCGAGGGGCCAGAGGAGGGTGGAGAGAGCAAGTGGGCCCGGGCGACCTaGGATATCACATCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FETGTEQIEGPEEGGESKWARAT*DITSSM Trigger: CATGGAGGATGTGATATCCCAGGTCGCCCGGGCCCA...CTTGCTCTCTCCACCCTCCTCTGGCCCCTCGATTTGTTCTGTTCCTGTCTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | GTGGGGGAAGAGTTATTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAGTCACCTGGTCGTGCTaGGAAAGGTCACGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGEELFTRRLRGPEAHLGVTWSC*ERSRKP Trigger: AGGCTTCCGTGACCTTTCTCAGCACGACCAGGTGAC...TCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAATAACTCTTCCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGGCTGGGAGACCTGGGTaGTGTCAGCTGTTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGERSAEFDSVQGGSGRRAGRPG*CQLLWE Trigger: TTCCCACAACAGCTGACACCACCCAGGTCTCCCAGC...CCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGCCGAATATACGTGGGTaGGGCACAGACGGTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAAPNIRG*GTDGAH Trigger: ATGGGCACCGTCTGTGCCCCACCCACGTATATTCGG...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGAGGTGAGGGGCCCATaGAGCCAGAGGTGGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFRLVKEREVQSSILYKGEVRGP*SQRWDV Trigger: CACATCCCACCTCTGGCTCCATGGGCCCCTCACCTC...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGATATCACATCCTCCATaGTGGGCTCAGGGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAAISHPP*WAQGWE Trigger: CTCCCAGCCCTGAGCCCACCATGGAGGATGTGATAT...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGTATGTGGGACAACCTTaGGTCAGGGACTGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAAYVGQP*VRDWKL Trigger: CAGCTTCCAGTCCCTGACTCAAGGTTGTCCCACATA...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGTTCTTGAAGCGACACTaGTGGCAGCGGTTGCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVKEREVQSSILYKGAAFLKRH*WQRLRL Trigger: CAATCGCAACCGCTGCCAGCAGTGTCGCTTCAAGAA...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | GTGGGGGAAGAGTTATTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGATCTGGTCCTTCACGTTaGACAACGATGCAAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGEELFTRRLRGPEAHLGSGPSR*TTMQSA Trigger: TGCGCTTTGCATCGTTGTTCAACGTGAAGGACCAGA...TCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAATAACTCTTCCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAGACAGGAACAGAACAAATCGAGGGGCCAGAGGAGGGTGGAGAGAGCAAGAAGGTCACGGAAGCCTaGGATGTGTTTGGCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FETGTEQIEGPEEGGESKKVTEA*DVFGKL Trigger: GAGTTTGCCAAACACATCCCAGGCTTCCGTGACCTT...CTTGCTCTCTCCACCCTCCTCTGGCCCCTCGATTTGTTCTGTTCCTGTCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATGAGCGGGCAGGGTCCTaGGTGAGGGAGCCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNERAGS*VREPVG Trigger: ACCTACTGGCTCCCTCACCCAGGACCCTGCCCGCTC...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCAGCCCACCAAAGGTGTaGGGGCTGGTGCAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILVCFSFSSRKGERSAEFSPPKV*GLVQEE Trigger: CTCCTCCTGCACCAGCCCCCACACCTTTGGTGGGCT...GAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGAGCTGTTGTGGGAACTaGGAGAAGCCCACCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFRLVKEREVQSSILYKGSCCGN*EKPTKG Trigger: ACCTTTGGTGGGCTTCTCTCAGTTCCCACAACAGCT...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGTCTCTCTCTTGGGGATaGGCCCAAAACGCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFRLVKEREVQSSILYKGSLSWG*AQNAQH Trigger: ATGCTGTGCGTTTTGGGCGCATCCCCAAGAGAGAGA...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGGCTGCTGTCTTCCATaGCCACTTGTAGACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFRLVKEREVQSSILYKGGCCLP*PLVDFL Trigger: CAGGAAGTCTACAAGTGGCCATGGAAGACAGCAGCC...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGTGTTGCTTGTGCCCTTaGTGGGGGACACTCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQCCLCP*WGTLGC Trigger: GCAGCCGAGTGTCCCCCAGCAAGGGCACAAGCAACA...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | CTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTGTCATGGGCATAGGTaGAGATTTCTCGATGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVCFSFSSRKGERSAEFDCHGHR*RFLDGP Trigger: GGGCCCATCGAGAAATCTTCACCTATGCCCATGACA...ATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGATGCATGATTGGCATTaGAGTTACCAGGTGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFRLVKEREVQSSILYKGMHDWH*SYQVRC Trigger: GCACCTCACCTGGTAACTTCAATGCCAATCATGCAT...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGTGGGGGACACTCGGCTaGTGTCTTCCATGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQWGTLG*CLPWPL Trigger: AAGTGGCCATGGAAGACAGCAGCCGAGTGTCCCCCA...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATAGCGTCTCCTGGAGCTaGTCCACCGAAGCGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNSVSWS*STEAEF Trigger: GAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCT...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGGGGATACATGTTCATaGGACATGCCAGCAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PFRLVKEREVQSSILYKGGDTCS*DMPAEH Trigger: ATGTTCTGCTGGCATGTCCCATGAACATGTATCCCC...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR TCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTCAAACATGGCATTaGGCAGGTCGCCCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQSQTWH*AGRPCP Trigger: TGGGCATGGGCGACCTGCTCAATGCCATGTTTGACT...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCTCAGGGACTGGAAGCTaGCATTGGAGCTGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILVCFSFSSRKGERSAEFSGTGS*HWSCHC Trigger: ACAGTGACAGCTCCAATGGCAGCTTCCAGTCCCTGA...GAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGCTAGAGGGCACAGGCTaGTCAGTTGGTTGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQLEGTG*SVGCWP Trigger: TGGCCAACAACCAACTGAGCAGCCTGTGCCCTCTAG...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATCTCCTCCTCGGTAAGTaGCAGGGAGTTGAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNLLLGK*QGVELL Trigger: GAGAAGCTCAACTCCCTGGCACTTACCGAGGAGGAG...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTAGTTGCTTCTCTCTCTTaGGGATGCGCCCAAAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFSFSSRKGERSAEFDSVVASLS*GCAQNA Trigger: TGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAAC...TACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | AATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCATTGCTGTTAGGTTGGTaGCAGCTGTGGTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKILVCFSFSSRKGERSALLLGW*QLWWVG Trigger: CCCCACCCACCACAGCTGCCACCAACCTAACAGCAA...TGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | AATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCACGGCCGCTGCGTCCATaGGGATACATGTTCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKILVCFSFSSRKGERSARPLRP*GYMFMG Trigger: TCCCATGAACATGTATCCCCATGGACGCAGCGGCCG...TGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | CTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATAGTTACCAGGTGAGGTaGCTAACTTGTCATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVCFSFSSRKGERSAEFDSYQVR*LTCHGH Trigger: ATGCCCATGACAAGTTAGGCACCTCACCTGGTAACT...ATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGGCAGACTGTAGGTTGTaGGGCTCAGGAACATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQADCRL*GSGTSL Trigger: CAGTGATGTTCCTGAGCCGCACAACCTACAGTCTGC...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATATTGAAGCGACACTGCTaGCAGCGGTTGCGATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQEGSGGQRLILEYFITILKRHC*QRLRLM Trigger: CATCAATCGCAACCGCTGCCAGCAGTGTCGCTTCAA...TATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGTGTTGGCCAAGTTCATaGCGCTCTGCATCTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQCWPSS*RSASRQ Trigger: TTGCCGAGATGCAGAGCGCCATGAACTTGGCCAACA...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTATGCTCAGTTGGTTGTTaGCCAAGTTCATGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSFSSRKGERSAEFDSVCSVGC*PSSWRS Trigger: AGAGCGCCATGAACTTGGCCAACAACCAACTGAGCA...TACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATTGGTGTCAGCTGTTGTaGGAACTGAGAGAAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNWCQLL*ELREAH Trigger: GTGGGCTTCTCTCAGTTCCCACAACAGCTGACACCA...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCCCAGCAGAACATTCTTaGTGTTGCCTTGCCGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILVCFSFSSRKGERSAEFPAEHS*CCLAVD Trigger: GTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGG...GAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGCCTGGGATGTGTTTaGCAAACTCTACCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRFWFAFPFRLVKEREVQSLGCV*QTLPPP Trigger: GGGAGGTGGTAGAGTTTGCCAAACACATCCCAGGCT...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATAATGGTGGGAAGTATGTaGGACAACCTTGAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQEGSGGQRLILEYFITIMVGSM*DNLESG Trigger: CCCTGACTCAAGGTTGTCCCACATACTTCCCACCAT...TATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | CTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATAGACACCGTTTGTACTaGATATTCTGTTGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCFSFSSRKGERSAEFDRHRLY*IFCWML Trigger: GAGCATCCAACAGAATATCCAGTACAAACGGTGTCT...ATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTCCATTGCTGTTAGGTTaGTGGCAGCTGTGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: INKILVCFSFSSRKGERSPLLLG*WQLWWV Trigger: CACCCACCACAGCTGCCACCAACCTAACAGCAATGG...ACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATCATGTTCATGGGACATaGCAGCAGAACATTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNHVHGT*QQNILG Trigger: ACCAAGAATGTTCTGCTGGCATGTCCCATGAACATG...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTAGCAGCTTCTCGGAATaGATGTTGTTCAGGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: INKILVCFSFSSRKGERSSSFSE*MLFRVR Trigger: GCGGACCCTGAACAACATGCATTCCGAGAAGCTGCT...ACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CCA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATAGGAACATCACTGTCTaGTCCTTCACGTTGAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNRNITV*SFTLNN Trigger: GTTGTTCAACGTGAAGGACCAGACAGTGATGTTCCT...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTCACGTTGAACAACGATaGAAAGCGCACCATCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: INKILVCFSFSSRKGERSHVEQR*KAHHQH Trigger: GTGCTGATGGTGCGCTTTGCATCGTTGTTCAACGTG...ACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 90 bp | TTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTaGTCCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSTRARRARSSVSWS*STEAEFSIPERSAE Trigger: CTCTGCAGACCGCTCGGGAATGGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | CGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTaGAGCTGCTCCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFFSTRARRARSSVS*SCSTEAEFSIPERS Trigger: AGACCGCTCGGGAATGGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTGAAGAACCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | CCCGGGCGACCTGGGATATCACATCCTCCATGGTGGGCTCAGGGCTaGGAGACCTGGGTGGTGTCAGCTGTTGTGGGAACTGAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRPGISHPPWWAQG*ETWVVSAVVGTERS Trigger: GCTTCTCTCAGTTCCCACAACAGCTGACACCACCCAGGTCTCCCAGCCCTGAGCCCACCATGGAGGATGTGATATCCCAGGTCGCCCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | GGAAGTATGTGGGACAACCTTGAGTCAGGGACTGGAAGCTGCCATTaGAGCTGTCACTGTAGAGGGACTCCGGGCTGGTCCGGCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSMWDNLESGTGSCH*SCHCRGTPGWSGSG Trigger: CCCCGAGCCGGACCAGCCCGGAGTCCCTCTACAGTGACAGCTCCAATGGCAGCTTCCAGTCCCTGACTCAAGGTTGTCCCACATACTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | AGATTTCTCGATGGGCCCGGGCGACCTGGGATATCACATCCTCCATaGTGGGCTCAGGGCTGGGAGACCTGGGTGGTGTCAGCTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RFLDGPGRPGISHPP*WAQGWETWVVSAVV Trigger: CACAACAGCTGACACCACCCAGGTCTCCCAGCCCTGAGCCCACCATGGAGGATGTGATATCCCAGGTCGCCCGGGCCCATCGAGAAATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | TCACTGAGACTGGGTGGCGCACTGCCAAAAGAGCGGGCAGGGTCCTaGGTGAGGGAGCCAGTAGGTGATGGTGGGAAGTATGTGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLRLGGALPKERAGS*VREPVGDGGKYVGQ Trigger: TTGTCCCACATACTTCCCACCATCACCTACTGGCTCCCTCACCCAGGACCCTGCCCGCTCTTTTGGCAGTGCGCCACCCAGTCTCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 90 bp | ATGGTGGGAAGTATGTGGGACAACCTTGAGTCAGGGACTGGAAGCTaGCATTGGAGCTGTCACTGTAGAGGGACTCCGGGCTGGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: MVGSMWDNLESGTGS*HWSCHCRGTPGWSG Trigger: GCCGGACCAGCCCGGAGTCCCTCTACAGTGACAGCTCCAATGGCAGCTTCCAGTCCCTGACTCAAGGTTGTCCCACATACTTCCCACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | TCAGCGCTTCATTATGACGCTGAGCCGCCAAAAGGTTGTTGTCGTTaGGGGCAGACGGGCATCCCTGACTCTCCCAGCGGTGTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SALHYDAEPPKGCCR*GQTGIPDSPSGVEL Trigger: CAACTCCACACCGCTGGGAGAGTCAGGGATGCCCGTCTGCCCCCAACGACAACAACCTTTTGGCGGCTCAGCGTCATAATGAAGCGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCAGCTTGAGCAGCAGCTaGGTGAAGCGGGAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: REKCRVRFCTRGQRQKAGSLSSS*VKREVS Trigger: GGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAGCT...GCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGACCATGCCATTCAGCTaGGTAATGTTGCTTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSAEFDSVQGGSGRRPAGTMPFS*VMLLVP Trigger: GGGCACAAGCAACATTACCAAGCTGAATGGCATGGT...CCCGGCCGGCCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 90 bp | ATGAAGAGGATGACGATGATGCAGAAGAAGGGGAGCTATCATCACTaGGACTGGGTGGCGCACTGCCAAAAGAGCGGGCAGGGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MKRMTMMQKKGSYHH*DWVAHCQKSGQGPG Trigger: CCCAGGACCCTGCCCGCTCTTTTGGCAGTGCGCCACCCAGTCTCAGTGATGATAGCTCCCCTTCTTCTGCATCATCGTCATCCTCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | GTGGGGGAAGAGTTATTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGACCTTGCCGTAGACTGTaGGCAGGTGCCTCCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGEELFTRRLRGPEAHLGPCRRL*AGASPS Trigger: AGAAGGGGAGGCACCTGCCAACAGTCTACGGCAAGG...TCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAATAACTCTTCCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 90 bp | GAGAAGTCTTCCCAGATCTCCTGCACAGTCCGGCCGCTGCGTCCATaGGGATACATGTTCATGGGACATGCCAGCAGAACATTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EKSSQISCTVRPLRP*GYMFMGHASRTFLV Trigger: CACCAAGAATGTTCTGCTGGCATGTCCCATGAACATGTATCCCCATGGACGCAGCGGCCGGACTGTGCAGGAGATCTGGGAAGACTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCGTTGCTTCTCTCTCTaGGGGATGCGCCCAAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: KGERSAEFDSVQGGSGRRRCFSL*GMRPKR Trigger: GCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACG...CCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 90 bp | TTGTTGGCCAAGTTCATGGCGCTCTGCATCTCGGCAAGCATCCGTTaGTTCTCTCTCTTGGGGATGCGCCCAAAACGCACAGCATCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLAKFMALCISASIR*FSLLGMRPKRTASL Trigger: TAGAGATGCTGTGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAGATGCAGAGCGCCATGAACTTGGCCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | GATTTGAGACAGGAACAGAACAAATCGAGGGGCCAGAGGAGGGTGGAGAGAGCACTCGGCAAGCATCCGTaGCTTCTCTCTCTTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DLRQEQNKSRGQRRVERALGKHP*LLSLGD Trigger: ATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAG...TGCTCTCTCCACCCTCCTCTGGCCCCTCGATTTGTTCTGTTCCTGTCTCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 90 bp | TGTAGGTTGTGCGGCTCAGGAACATCACTGTCTGGTCCTTCACGTTaGACAACGATGCAAAGCGCACCATCAGCACCTCAAAGGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRLCGSGTSLSGPSR*TTMQSAPSAPQRCQ Trigger: CTGGCACCTTTGAGGTGCTGATGGTGCGCTTTGCATCGTTGTTCAACGTGAAGGACCAGACAGTGATGTTCCTGAGCCGCACAACCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 90 bp | TACATGTTCATGGGACATGCCAGCAGAACATTCTTGGTGTTGCCTTaGCGTAGACTGTTGGCAGGTGCCTCCCCTTCTGGGGCCGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: YMFMGHASRTFLVLP*RRLLAGASPSGAEY Trigger: ATATTCGGCCCCAGAAGGGGAGGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGCATGTCCCATGAACATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGATGTTGCTTGTGCCCTaGCTGGGGGACACTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFRLVKEREVQSSILYKGMLLVP*LGDTRL Trigger: CAGCCGAGTGTCCCCCAGCAAGGGCACAAGCAACAT...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGTTCAGCTTGGTAATGTaGCTTGTGCCCTTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KGERSAEFDSVQGGSGRRFSLVM*LVPLLG Trigger: CCCCAGCAAGGGCACAAGCAACATTACCAAGCTGAA...CCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGAAGCCTGGGATGTGTTaGGCAAACTCTACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGERSAEFDSVQGGSGRRKPGMC*ANSTTS Trigger: GGAGGTGGTAGAGTTTGCCAAACACATCCCAGGCTT...CCTTCTGCCGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | GTGGGGGAAGAGTTATTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAGTCTGGTCCTTCACGTaGAACAACGATGCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGEELFTRRLRGPEAHLGVWSFT*NNDAKR Trigger: GCGCTTTGCATCGTTGTTCAACGTGAAGGACCAGAC...TCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAATAACTCTTCCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | CGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGTAAGTGCCAGGGAGTaGAGCTTCTCGCTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLVKEREVQSSILYKGAAVSARE*SFSLKS Trigger: TGACTTCAGCGAGAAGCTCAACTCCCTGGCACTTAC...CGCTGCCCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 90 bp | CTCTCCCAGCGGTGTGGAGTTGTAGCTGAAGGGCTACCTGATGCATaGTTGGCATTGAAGTTACCAGGTGAGGTGCCTAACTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQRCGVVAEGLPDA*LALKLPGEVPNLSW Trigger: CCATGACAAGTTAGGCACCTCACCTGGTAACTTCAATGCCAATCATGCATCAGGTAGCCCTTCAGCTACAACTCCACACCGCTGGGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | CCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGCACAGACGGTGCCCATaGCTGTTAGGTTGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFRLVKEREVQSSILYKGHRRCP*LLGWWQ Trigger: CTGCCACCAACCTAACAGCAATGGGCACCGTCTGTG...CCCCTTGTACAGAATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCGATCGCAGGTCCGGCAGCTaGAGCAGCAGCTTGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVCFSFSSRKGERSAEFDRRSGS*SSSLVK Trigger: CTTCACCAAGCTGCTGCTCAAGCTGCCGGACCTGCG...ATCGAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCTGGCAGCGGTTGCGATaGATGCGAACGATGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILVCFSFSSRKGERSAEFWQRLR*MRTMEQ Trigger: CTGCTCCATCGTTCGCATCAATCGCAACCGCTGCCA...GAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCCCCATTGCTGTTAGGTaGGTGGCAGCTGTGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILVCFSFSSRKGERSAEFPIAVR*VAAVVG Trigger: ACCCACCACAGCTGCCACCAACCTAACAGCAATGGG...GAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATCACTGCTGGCAGCGGTaGCGATTGATGCGAACGATG | + |
|
Preference number: 5 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNHCWQR*RLMRTM Trigger: CATCGTTCGCATCAATCGCAACCGCTGCCAGCAGTG...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAACGGAGAGACACTTCTaGAAGCGACACTGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NKILVCFSFSSRKGERSATERHF*KRHCWQ Trigger: CTGCCAGCAGTGTCGCTTCAAGAAGTGTCTCTCCGT...TGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCACTGCTCAGTTGGTTGTaGGCCAAGTTCATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NKILVCFSFSSRKGERSALLSWL*AKFMAL Trigger: GAGCGCCATGAACTTGGCCAACAACCAACTGAGCAG...TGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | TTTACAAGAAGGCTCAGGGGGCCAGAGGCTCATCTTGGAATATTTTATAACAATGCCAGCAGAACATTCTaGGTGTTGCCTTGCCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FTRRLRGPEAHLGIFYNNASRTF*VLPCRR Trigger: TCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGC...ATTGTTATAAAATATTCCAAGATGAGCCTCTGGCCCCCTGAGCCTTCTTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | AATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCATTCTCGGAATGCATGTaGTTCAGGGTCCGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKILVCFSFSSRKGERSAFSECM*FRVRRS Trigger: GGACCTGCGGACCCTGAACAACATGCATTCCGAGAA...TGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGTTCATAACACCACCTGTGTaGTTATTGGAGTCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILVCFSFSSRKGERSAEFITPPV*LLESRV Trigger: GACCCTGGACTCCAATAACAACACAGGTGGTGTTAT...GAACTCTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | ATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGCAGAGAACATTCTTGGTGTaGCCTTGCCGTAGACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRFWFAFPFRLVKEREVQRTFLV*PCRRLL Trigger: CAACAGTCTACGGCAAGGCAACACCAAGAATGTTCT...CTGCACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS-3UTR CAA 90 bp | ATAAATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCGTAAAGGAGAGAGAAGTGTATGTGGGACAACCTaGAGTCAGGGACTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: INKILVCFSFSSRKGERSVCGTT*SQGLEA Trigger: AGCTTCCAGTCCCTGACTCAAGGTTGTCCCACATAC...ACTTCTCTCTCCTTTACGAGACGAAAAGGAAAAGCAAACCAGAATCTTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | AGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTaGTCCACCGAAGCGGAATTCTCCATTCCCGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RARRARSSVSWS*STEAEFSIPER Trigger: CCGCTCGGGAATGGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | AGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTaGAGCTGCTCCACCGAAGCGGAATTCTCCATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: STRARRARSSVS*SCSTEAEFSIP Trigger: GGGAATGGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | TTCAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCTaGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRVRRSGSLSSS*VKREVSEGRFF Trigger: GAAGAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAGCTGCCGGACCTGCGGACCCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | CACTGGGCGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCATGTaGTTCAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HWASTRKDSSFSECM*FRVRRSGSLSSSLV Trigger: CACCAAGCTGCTGCTCAAGCTGCCGGACCTGCGGACCCTGAACAACATGCATTCCGAGAAGCTGCTGTCCTTCCGGGTGGACGCCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | TGGGCGTCCACCCGGAAGGACAGCAGCTTCTCGGAATaGATGTTGTTCAGGGTCCGCAGGTCCGGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WASTRKDSSFSE*MLFRVRRSGSL Trigger: CAAGCTGCCGGACCTGCGGACCCTGAACAACATGCATTCCGAGAAGCTGCTGTCCTTCCGGGTGGACGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | CTCAGGGCTGGGAGACCTGGGTGGTGTCAGCTGTTGTaGGAACTGAGAGAAGCCCACCAAAGGTGTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRAGRPGWCQLL*ELREAHQRCGG Trigger: GCCCCCACACCTTTGGTGGGCTTCTCTCAGTTCCCACAACAGCTGACACCACCCAGGTCTCCCAGCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | GCCGAATATACGTGGGTGGGGCACAGACGGTGCCCATaGCTGTTAGGTTGGTGGCAGCTGTGGTGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AEYTWVGHRRCP*LLGWWQLWWVG Trigger: CCCCACCCACCACAGCTGCCACCAACCTAACAGCAATGGGCACCGTCTGTGCCCCACCCACGTATATTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | TGCATGTTGTTCAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCTaGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTCTTCAGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CMLFRVRRSGSLSSS*VKREVSEGRFFSTR Trigger: TCTGGTGCTGAAGAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAGCTGCCGGACCTGCGGACCCTGAACAACATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | AGCTTCTCGGAATGCATGTTGTTCAGGGTCCGCAGGTCCGGCAGCTaGAGCAGCAGCTTGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFSECMLFRVRRSGS*SSSLVKREVSEGRF Trigger: GAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAGCTGCCGGACCTGCGGACCCTGAACAACATGCATTCCGAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 72 bp | CTGGGAGACCTGGGTGGTGTCAGCTGTTGTGGGAACTaGGAGAAGCCCACCAAAGGTGTGGGGGCTGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGDLGGVSCCGN*EKPTKGVGAGA Trigger: TGCACCAGCCCCCACACCTTTGGTGGGCTTCTCTCAGTTCCCACAACAGCTGACACCACCCAGGTCTCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | TCCACCCGGAAGGACAGCAGCTTCTCGGAATGCATGTaGTTCAGGGTCCGCAGGTCCGGCAGCTTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: STRKDSSFSECM*FRVRRSGSLSS Trigger: GCTGCTCAAGCTGCCGGACCTGCGGACCCTGAACAACATGCATTCCGAGAAGCTGCTGTCCTTCCGGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | TGGGACAACCTTGAGTCAGGGACTGGAAGCTGCCATTaGAGCTGTCACTGTAGAGGGACTCCGGGCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WDNLESGTGSCH*SCHCRGTPGWS Trigger: GGACCAGCCCGGAGTCCCTCTACAGTGACAGCTCCAATGGCAGCTTCCAGTCCCTGACTCAAGGTTGTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | CATTATGACGCTGAGCCGCCAAAAGGTTGTTGTCGTTaGGGGCAGACGGGCATCCCTGACTCTCCCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: HYDAEPPKGCCR*GQTGIPDSPSG Trigger: ACCGCTGGGAGAGTCAGGGATGCCCGTCTGCCCCCAACGACAACAACCTTTTGGCGGCTCAGCGTCATAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | GGACATGCCAGCAGAACATTCTTGGTGTTGCCTTGCCGTAGACTGTaGGCAGGTGCCTCCCCTTCTGGGGCCGAATATACGTGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHASRTFLVLPCRRL*AGASPSGAEYTWVG Trigger: CCCCACCCACGTATATTCGGCCCCAGAAGGGGAGGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGCATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | ACCGCGGTGAATAGGCCCAGCTCCTCCTCGGTAAGTGCCAGGGAGTaGAGCTTCTCGCTGAAGTCAAACATGGCATTGAGCAGGTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TAVNRPSSSSVSARE*SFSLKSNMALSRSP Trigger: GGGCGACCTGCTCAATGCCATGTTTGACTTCAGCGAGAAGCTCAACTCCCTGGCACTTACCGAGGAGGAGCTGGGCCTATTCACCGCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | GTAAGTGCCAGGGAGTTGAGCTTCTCGCTGAAGTCAAACATGGCATaGAGCAGGTCGCCCATGCCCATGGCACCGAGCTCCTGCAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VSARELSFSLKSNMA*SRSPMPMAPSSCRL Trigger: CAGTCTGCAGGAGCTCGGTGCCATGGGCATGGGCGACCTGCTCAATGCCATGTTTGACTTCAGCGAGAAGCTCAACTCCCTGGCACTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | TCCCAGATCTCCTGCACAGTCCGGCCGCTGCGTCCATaGGGATACATGTTCATGGGACATGCCAGCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SQISCTVRPLRP*GYMFMGHASRT Trigger: TGTTCTGCTGGCATGTCCCATGAACATGTATCCCCATGGACGCAGCGGCCGGACTGTGCAGGAGATCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | AGGGAGTTGAGCTTCTCGCTGAAGTCAAACATGGCATaGAGCAGGTCGCCCATGCCCATGGCACCGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RELSFSLKSNMA*SRSPMPMAPSS Trigger: GGAGCTCGGTGCCATGGGCATGGGCGACCTGCTCAATGCCATGTTTGACTTCAGCGAGAAGCTCAACTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | TGTGGAGTAGGTGAGGTCTCTAGAGGGCACAGGCTGCTCAGTTGGTaGTTGGCCAAGTTCATGGCGCTCTGCATCTCGGCAAGCATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CGVGEVSRGHRLLSW*LAKFMALCISASIR Trigger: ACGGATGCTTGCCGAGATGCAGAGCGCCATGAACTTGGCCAACAACCAACTGAGCAGCCTGTGCCCTCTAGAGACCTCACCTACTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | ATGGGACATGCCAGCAGAACATTCTTGGTGTTGCCTTaGCGTAGACTGTTGGCAGGTGCCTCCCCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MGHASRTFLVLP*RRLLAGASPSG Trigger: CCCAGAAGGGGAGGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGCATGTCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | AGAAGTCTTCCCAGATCTCCTGCACAGTCCGGCCGCTaGGTCCATGGGGATACATGTTCATGGGACATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLPRSPAQSGR*VHGDTCSWDMP Trigger: TGGCATGTCCCATGAACATGTATCCCCATGGACGCAGCGGCCGGACTGTGCAGGAGATCTGGGAAGACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | ACCATGCCATTCAGCTTGGTAATGTTGCTTGTGCCCTaGCTGGGGGACACTCGGCTGCTGTCTTCCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TMPFSLVMLLVP*LGDTRLLSSMA Trigger: GGCCATGGAAGACAGCAGCCGAGTGTCCCCCAGCAAGGGCACAAGCAACATTACCAAGCTGAATGGCATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | CAAGTTCATGGCGCTCTGCATCTCGGCAAGCATCCGTaGCTTCTCTCTCTTGGGGATGCGCCCAAAACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QVHGALHLGKHP*LLSLGDAPKTH Trigger: GTGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAGATGCAGAGCGCCATGAACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | TTCATGGCGCTCTGCATCTCGGCAAGCATCCGTTGCTTCTCTCTCTaGGGGATGCGCCCAAAACGCACAGCATCTCTAGACATGCCAACG | + |
|
Preference number: 6 (lower is better) Translates to: FMALCISASIRCFSL*GMRPKRTASLDMPT Trigger: CGTTGGCATGTCTAGAGATGCTGTGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAGATGCAGAGCGCCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | GTTGTTGGCCAAGTTCATGGCGCTCTGCATCTCGGCAAGCATCCGTaGCTTCTCTCTCTTGGGGATGCGCCCAAAACGCACAGCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VVGQVHGALHLGKHP*LLSLGDAPKTHSIS Trigger: AGAGATGCTGTGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAGATGCAGAGCGCCATGAACTTGGCCAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 72 bp | TACCAGGTGAGGTGCCTAACTTGTCATGGGCATAGGTaGAGATTTCTCGATGGGCCCGGGCGACCTGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: YQVRCLTCHGHR*RFLDGPGRPGI Trigger: TATCCCAGGTCGCCCGGGCCCATCGAGAAATCTTCACCTATGCCCATGACAAGTTAGGCACCTCACCTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | AAGTTCATGGCGCTCTGCATCTCGGCAAGCATCCGTTaGTTCTCTCTCTTGGGGATGCGCCCAAAACGCACA | + |
|
Preference number: 6 (lower is better) Translates to: KFMALCISASIR*FSLLGMRPKRT Trigger: TGTGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAGATGCAGAGCGCCATGAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | GCAGAACATTCTTGGTGTTGCCTTGCCGTAGACTGTTaGCAGGTGCCTCCCCTTCTGGGGCCGAATATACGT | + |
|
Preference number: 6 (lower is better) Translates to: AEHSWCCLAVDC*QVPPLLGPNIR Trigger: ACGTATATTCGGCCCCAGAAGGGGAGGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | CAGTCCGGCCGCTGCGTCCATGGGGATACATGTTCATaGGACATGCCAGCAGAACATTCTTGGTGTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QSGRCVHGDTCS*DMPAEHSWCCL Trigger: AAGGCAACACCAAGAATGTTCTGCTGGCATGTCCCATGAACATGTATCCCCATGGACGCAGCGGCCGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | CTCTGCATCTCGGCAAGCATCCGTTGCTTCTCTCTCTaGGGGATGCGCCCAAAACGCACAGCATCTCTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LCISASIRCFSL*GMRPKRTASLD Trigger: GTCTAGAGATGCTGTGCGTTTTGGGCGCATCCCCAAGAGAGAGAAGCAACGGATGCTTGCCGAGATGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 90 bp | CACAGTAGCACCATGCCATTCAGCTTGGTAATGTTGCTTGTGCCCTaGCTGGGGGACACTCGGCTGCTGTCTTCCATGGCCACTTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: HSSTMPFSLVMLLVP*LGDTRLLSSMATCR Trigger: TCTACAAGTGGCCATGGAAGACAGCAGCCGAGTGTCCCCCAGCAAGGGCACAAGCAACATTACCAAGCTGAATGGCATGGTGCTACTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 72 bp | CCAGTAGGTGATGGTGGGAAGTATGTGGGACAACCTTaGGTCAGGGACTGGAAGCTGCCATTGGAGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PVGDGGKYVGQP*VRDWKLPLELS Trigger: TGACAGCTCCAATGGCAGCTTCCAGTCCCTGACTCAAGGTTGTCCCACATACTTCCCACCATCACCTACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | TGTTCATGGGACATGCCAGCAGAACATTCTTGGTGTTaGCTTGCCGTAGACTGTTGGCAGGTGCCTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSWDMPAEHSWC*LAVDCWQVPPL Trigger: AAGGGGAGGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGCATGTCCCATGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | GTGCGGCTCAGGAACATCACTGTCTGGTCCTTCACGTaGAACAACGATGCAAAGCGCACCATCAGCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VRLRNITVWSFT*NNDAKRTISTS Trigger: TGAGGTGCTGATGGTGCGCTTTGCATCGTTGTTCAACGTGAAGGACCAGACAGTGATGTTCCTGAGCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | AATAGGCCCAGCTCCTCCTCGGTAAGTGCCAGGGAGTaGAGCTTCTCGCTGAAGTCAAACATGGCATTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NRPSSSSVSARE*SFSLKSNMALS Trigger: GCTCAATGCCATGTTTGACTTCAGCGAGAAGCTCAACTCCCTGGCACTTACCGAGGAGGAGCTGGGCCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 72 bp | TGCGGCTCAGGAACATCACTGTCTGGTCCTTCACGTTaGACAACGATGCAAAGCGCACCATCAGCACCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CGSGTSLSGPSR*TTMQSAPSAPQ Trigger: TTGAGGTGCTGATGGTGCGCTTTGCATCGTTGTTCAACGTGAAGGACCAGACAGTGATGTTCCTGAGCCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS GCA 72 bp | GAACATCACTGTCTGGTCCTTCACGTTGAACAACGATaGAAAGCGCACCATCAGCACCTCAAAGGTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EHHCLVLHVEQR*KAHHQHLKGAS Trigger: GCTGGCACCTTTGAGGTGCTGATGGTGCGCTTTGCATCGTTGTTCAACGTGAAGGACCAGACAGTGATGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | GGATACATGTTCATGGGACATGCCAGCAGAACATTCTaGGTGTTGCCTTGCCGTAGACTGTTGGCAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GYMFMGHASRTF*VLPCRRLLAGA Trigger: GGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGCATGTCCCATGAACATGTATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS TCA 72 bp | CGGTGTGGAGTTGTAGCTGAAGGGCTACCTGATGCATaGTTGGCATTGAAGTTACCAGGTGAGGTGCCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: RCGVVAEGLPDA*LALKLPGEVPN Trigger: GTTAGGCACCTCACCTGGTAACTTCAATGCCAATCATGCATCAGGTAGCCCTTCAGCTACAACTCCACACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CCA 72 bp | GATACATGTTCATGGGACATGCCAGCAGAACATTCTTaGTGTTGCCTTGCCGTAGACTGTTGGCAGGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DTCSWDMPAEHS*CCLAVDCWQVP Trigger: AGGCACCTGCCAACAGTCTACGGCAAGGCAACACCAAGAATGTTCTGCTGGCATGTCCCATGAACATGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||
| CDS CAA 72 bp | CGAACGATGGAGCAGTTTTCGTTTTTCAGACACCGTTaGTACTGGATATTCTGTTGGATGCTCCGGCGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RTMEQFSFFRHR*YWIFCWMLRRK Trigger: TTTTCGCCGGAGCATCCAACAGAATATCCAGTACAAACGGTGTCTGAAAAACGAAAACTGCTCCATCGTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064941.7 |
||