Pregenerated sensors for NQO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046949Ensembl transcript IDs: ENSMUST00000021843.13, ENSMUST00000058978.9, ENSMUST00000220844.2, ENSMUST00000222740.2, ENSMUST00000223479.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTTaGACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACT | + |
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Preference number: 1 (lower is better) Translates to: WALLNTSQDTTPPSL*TCCRSLTVLLVSCT Trigger: AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| 3UTR GCA 90 bp | CTACTTTCTGACATTAACAATGCTTCCTTCTTTGTTACTCACCTCTaGTCAGAGTGGCTCAAGGAACTGAATTCCACAGAGACAAGGATT | + |
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Preference number: 1 (lower is better) Translates to: LLSDINNASFFVTHL*SEWLKELNSTETRI Trigger: AATCCTTGTCTCTGTGGAATTCAGTTCCTTGAGCCACTCTGAGCAGAGGTGAGTAACAAAGAAGGAAGCATTGTTAATGTCAGAAAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR GCA 90 bp | TTTGGTTGCAGGCTGACATCTCTATGTATGCTTTCTGATTTACAATaGCACAACTCCAGCAAGAAAGGGCTTTATTTCTCAGGTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: FGCRLTSLCMLSDLQ*HNSSKKGLYFSGLI Trigger: GATCAGACCTGAGAAATAAAGCCCTTTCTTGCTGGAGTTGTGGCATTGTAAATCAGAAAGCATACATAGAGATGTCAGCCTGCAACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR TCA 90 bp | TACAATGCCACAACTCCAGCAAGAAAGGGCTTTATTTCTCAGGTCTaGTCAGTCCCTGAATTTAATTTCCTTTCTGGCTTGGGTTATTTC | + |
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Preference number: 1 (lower is better) Translates to: YNATTPARKGFISQV*SVPEFNFLSGLGYF Trigger: GAAATAACCCAAGCCAGAAAGGAAATTAAATTCAGGGACTGATCAGACCTGAGAAATAAAGCCCTTTCTTGCTGGAGTTGTGGCATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR TCA 90 bp | TATAGCGTAGATAATCTTTTCCTCAGCATGATTTTGGTTGCAGGCTaGCATCTCTATGTATGCTTTCTGATTTACAATGCCACAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: YSVDNLFLSMILVAG*HLYVCFLIYNATTP Trigger: TGGAGTTGTGGCATTGTAAATCAGAAAGCATACATAGAGATGTCAGCCTGCAACCAAAATCATGCTGAGGAAAAGATTATCTACGCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTGCAATTCCAGAGGACTTGGGTTCAATTCCCAGTACCCACCCGTCAGCTCTGTACCAGGACTTTaGGATCCCAAGCTGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TGCNSRGLGFNSQYPPVSSVPGL*DPKLFS Trigger: TGAAAACAGCTTGGGATCCCAAAGTCCTGGTACAGA...GCTGACGGGTGGGTACTGGGAATTGAACCCAAGTCCTCTGGAATTGCAGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCCATGTCTCAGCTCTAATCCTACATCTGCCTCTTTATAGCTGTGACCCTCACCTCTGCTCAGAGTaGCTCAAGGAACTGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: EGHVSALILHLPLYSCDPHLCSE*LKELNS Trigger: GGAATTCAGTTCCTTGAGCCACTCTGAGCAGAGGTG...AGGGTCACAGCTATAAAGAGGCAGATGTAGGATTAGAGCTGAGACATGGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGGGAAATCAGTGTCGCCACCAGAAAGACCAGGAAGATGTGCAAGAGAAAAGTGGAGTAATACTTaGAGGGCAAGACTGTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PKGKSVSPPERPGRCAREKWSNT*RARLLA Trigger: GGCCAACAGTCTTGCCCTTCAAGTATTACTCCACTT...TTCTCTTGCACATCTTCCTGGTCTTTCTGGTGGCGACACTGATTTCCCTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCCAGTACCCACCCGTCAGCTCACAACTGTCTGTAATTCCTGTTCTAGGGGCTTGGGTTATTTCTaGGCCACAGAACATGGATTA | + |
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Preference number: 2 (lower is better) Translates to: QFPVPTRQLTTVCNSCSRGLGYF*ATEHGL Trigger: TAATCCATGTTCTGTGGCCCAGAAATAACCCAAGCC...CCTAGAACAGGAATTACAGACAGTTGTGAGCTGACGGGTGGGTACTGGGAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR CAA 90 bp | ATAACAATAATAAAGAAGAGAGCACTGGCTGCAATTCCAGAGGACTaGGGTTCAATTCCCAGTACCCACCCGTCAGCTCACAACTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ITIIKKRALAAIPED*GSIPSTHPSAHNCL Trigger: CAGACAGTTGTGAGCTGACGGGTGGGTACTGGGAATTGAACCCAAGTCCTCTGGAATTGCAGCCAGTGCTCTCTTCTTTATTATTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR TCA 90 bp | CAATTCCCAGTACCCACCCGTCAGCTCACAACTGTCTGTAATTCCTGTTCTAGGCTTGTTGTGAGCTTCTaGAATGTGTTTGTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QFPVPTRQLTTVCNSCSRLVVSF*NVFVQG Trigger: ACCCTGAACAAACACATTTCAGAAGCTCACAACAAG...CCTAGAACAGGAATTACAGACAGTTGTGAGCTGACGGGTGGGTACTGGGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR GCA 90 bp | CAATTCCCAGTACCCACCCGTCAGCTCACAACTGTCTGTAATTCCTGTTCTAGGAAAAAGAAAAGGAATTaGTGTGGTCATGGTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QFPVPTRQLTTVCNSCSRKKKRN*CGHGVF Trigger: GAAGACACCATGACCACAGCAATTCCTTTTCTTTTT...CCTAGAACAGGAATTACAGACAGTTGTGAGCTGACGGGTGGGTACTGGGAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR GCA 90 bp | CAATTCCCAGTACCCACCCGTCAGCTCACAACTGTCTGTAATTCCTGTTCTAGGGTAGAACTAATACAGTaGAACAAGCTGACTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QFPVPTRQLTTVCNSCSRVELIQ*NKLTFE Trigger: TTCAAAAGTCAGCTTGTTGCACTGTATTAGTTCTAC...CCTAGAACAGGAATTACAGACAGTTGTGAGCTGACGGGTGGGTACTGGGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCTCAGTGTCTGTGCCTATAAAATGAGACAACTTTTCTTGCTTACAAGGAGCATCTCTGTACTTTaGAGACTGGAGCTGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: FCLSVCAYKMRQLFLLTRSISVL*RLELLG Trigger: TCCTAGCAGCTCCAGTCTCCAAAGTACAGAGATGCT...CCTTGTAAGCAAGAAAAGTTGTCTCATTTTATAGGCACAGACACTGAGGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR CAA 90 bp | AGCACAGTTACATATGCCAGAACTGCAGACACACTGTCTTCTAGCTaGTTAGGTGGTATAATAATGGAAGACCAGACCCTTTTACATCAC | + |
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Preference number: 2 (lower is better) Translates to: STVTYARTADTLSSS*LGGIIMEDQTLLHH Trigger: GTGATGTAAAAGGGTCTGGTCTTCCATTATTATACCACCTAACAAGCTAGAAGACAGTGTGTCTGCAGTTCTGGCATATGTAACTGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR CAA 90 bp | ATTTTAGCTCACAGTTTCAGCCCATTGAGAGCTATTCATATCATCTaGGAGAGGAAGAAAAGGGAATTCCTGAAGAGGTTAGGGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ILAHSFSPLRAIHII*ERKKREFLKRLGQD Trigger: ATCTTGCCCTAACCTCTTCAGGAATTCCCTTTTCTTCCTCTCCAAGATGATATGAATAGCTCTCAATGGGCTGAAACTGTGAGCTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCTCAGTGTCTGTGCCTATAAAATGAGACAACTTTTCTTGCTTACAAGGCCACTTAGAGACTTTTaGCAGCATCTCTGTACTTTG | + |
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Preference number: 2 (lower is better) Translates to: FCLSVCAYKMRQLFLLTRPLRDF*QHLCTL Trigger: CAAAGTACAGAGATGCTGGCAAAAGTCTCTAAGTGG...CCTTGTAAGCAAGAAAAGTTGTCTCATTTTATAGGCACAGACACTGAGGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGAGGGACCACCACTGTGAAAACAACATATCTCAGCATAAGGACACAATATATAGCTGTGACCCTTaGGCAAGAAATAGTCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: QRRDHHCENNISQHKDTIYSCDP*ARNSLN Trigger: ATTAAGACTATTTCTTGCTCAAGGGTCACAGCTATA...TATTGTGTCCTTATGCTGAGATATGTTGTTTTCACAGTGGTGGTCCCTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCTCAGTGTCTGTGCCTATAAAATGAGACAACTTTTCTTGCTTACAAGGTCTCATGTAACAAGATaGGTTTCTCCAAGGATGCTA | + |
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Preference number: 2 (lower is better) Translates to: FCLSVCAYKMRQLFLLTRSHVTR*VSPRML Trigger: TAGCATCCTTGGAGAAACCCATCTTGTTACATGAGA...CCTTGTAAGCAAGAAAAGTTGTCTCATTTTATAGGCACAGACACTGAGGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR CCA 72 bp | CCTTTCTGGCTTGGGTTATTTCTGGGCCACAGAACATaGATTAGTCAGGTCTGTCTGATGCCACACGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: PFWLGLFLGHRT*ISQVCLMPHVG Trigger: ACCCACGTGTGGCATCAGACAGACCTGACTAATCCATGTTCTGTGGCCCAGAAATAACCCAAGCCAGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR GCA 72 bp | ATCTTCTGGGGCTTGTGTTCTCCACTTAGAGACTTTTaGCAGCATCTCTGTACTTTGGAGACTGGAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: IFWGLCSPLRDF*QHLCTLETGAA Trigger: AGCAGCTCCAGTCTCCAAAGTACAGAGATGCTGGCAAAAGTCTCTAAGTGGAGAACACAAGCCCCAGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR-3UTR CAA 90 bp | AGCATCTCTGTACTTTGGAGACTGGAGCTGCTAGGATTTTCTACCACACTCCCCACAATGCTTCCTTCTTaGTTACTCACCTCTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: SISVLWRLELLGFSTTLPTMLPS*LLTSAQ Trigger: CTGAGCAGAGGTGAGTAACAAAGAAGGAAGCATTGT...GGGGAGTGTGGTAGAAAATCCTAGCAGCTCCAGTCTCCAAAGTACAGAGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR CCA 72 bp | AATCCAAGTGGAGTAATACTTGAAGGGCAAGACTGTTaGCCTAGCACACTCATCAGTGGGAAGGTCTCATGT | + |
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Preference number: 3 (lower is better) Translates to: NPSGVILEGQDC*PSTLISGKVSC Trigger: ACATGAGACCTTCCCACTGATGAGTGTGCTAGGCCAACAGTCTTGCCCTTCAAGTATTACTCCACTTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR TCA 72 bp | TTGTTACTCACCTCTGCTCAGAGTGGCTCAAGGAACTaGATTCCACAGAGACAAGGATTTTGCAAGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: LLLTSAQSGSRN*IPQRQGFCKVT Trigger: AGTGACCTTGCAAAATCCTTGTCTCTGTGGAATTCAGTTCCTTGAGCCACTCTGAGCAGAGGTGAGTAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR GCA 72 bp | TCAGTCATACTGGGACTAGATGATGTATTAAGCCTCTaGCTACTCCACCAGTTTGCCACAGTGACAGATACT | + |
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Preference number: 3 (lower is better) Translates to: SVILGLDDVLSL*LLHQFATVTDT Trigger: AGTATCTGTCACTGTGGCAAACTGGTGGAGTAGGCAGAGGCTTAATACATCATCTAGTCCCAGTATGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR GCA 72 bp | GACATTAACAATGCTTCCTTCTTTGTTACTCACCTCTaGTCAGAGTGGCTCAAGGAACTGAATTCCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: DINNASFFVTHL*SEWLKELNSTE Trigger: CTCTGTGGAATTCAGTTCCTTGAGCCACTCTGAGCAGAGGTGAGTAACAAAGAAGGAAGCATTGTTAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR CCA 72 bp | AATGCTTCCTTCTTTGTTACTCACCTCTGCTCAGAGTaGCTCAAGGAACTGAATTCCACAGAGACAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: NASFFVTHLCSE*LKELNSTETRI Trigger: AATCCTTGTCTCTGTGGAATTCAGTTCCTTGAGCCACTCTGAGCAGAGGTGAGTAACAAAGAAGGAAGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR TCA 72 bp | TTTTGGTTGCAGGCTGACATCTCTATGTATGCTTTCTaGTTTACAATGCCACAACTCCAGCAAGAAAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: FWLQADISMYAF*FTMPQLQQERA Trigger: AGCCCTTTCTTGCTGGAGTTGTGGCATTGTAAATCAGAAAGCATACATAGAGATGTCAGCCTGCAACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR GCA 72 bp | TTAAATACATCTCAGGATACAACACCACCTTCTCTTTaGACATGCTGTAGGTCTCTCACTGTGTTGCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LNTSQDTTPPSL*TCCRSLTVLLV Trigger: GACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| 3UTR GCA 72 bp | TTGTCATTAGAAATGCTCTCAGACACATCAGAGATCTaGTCCACTAGTCTCTTAAGCACTGTTCATCCAATC | + |
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Preference number: 3 (lower is better) Translates to: LSLEMLSDTSEI*STSLLSTVHPI Trigger: GATTGGATGAACAGTGCTTAAGAGACTAGTGGAGCAGATCTCTGATGTGTCTGAGAGCATTTCTAATGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR GCA 72 bp | AGGCTGACATCTCTATGTATGCTTTCTGATTTACAATaGCACAACTCCAGCAAGAAAGGGCTTTATTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: RLTSLCMLSDLQ*HNSSKKGLYFS Trigger: TGAGAAATAAAGCCCTTTCTTGCTGGAGTTGTGGCATTGTAAATCAGAAAGCATACATAGAGATGTCAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR TCA 72 bp | GATAATCTTTTCCTCAGCATGATTTTGGTTGCAGGCTaGCATCTCTATGTATGCTTTCTGATTTACAATGCC | + |
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Preference number: 3 (lower is better) Translates to: DNLFLSMILVAG*HLYVCFLIYNA Trigger: GGCATTGTAAATCAGAAAGCATACATAGAGATGTCAGCCTGCAACCAAAATCATGCTGAGGAAAAGATTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| 3UTR TCA 72 bp | TATCTGTTGATTACCCAAATTTGTTTCCATTGTAATTaGTACAAACTTAACCCCCACTTAAGCTCCAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: YLLITQICFHCN*YKLNPHLSSKG Trigger: CCCTTTGGAGCTTAAGTGGGGGTTAAGTTTGTATCAATTACAATGGAAACAAATTTGGGTAATCAACAGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR GCA 90 bp | ACTGGCTGCAATTCCAGAGGACTTGGGTTCAATTCCCAGTACCCACCCGTCAGCCTGTGCATCCCTGCTTaGTCAGTTCTTCAACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TGCNSRGLGFNSQYPPVSLCIPA*SVLQQP Trigger: TGGCTGTTGAAGAACTGAGCAAGCAGGGATGCACAG...GCTGACGGGTGGGTACTGGGAATTGAACCCAAGTCCTCTGGAATTGCAGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTGTTCTTCCTTCCAGATaGTCTTCAGCCGCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTVLPSR*SSAAGP Trigger: GGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAAC...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | CCCAAAGGGAAATCAGTGTCGCCACCAGAAAGACCAGGAAGATGTGCAAGAGAACAAGGGGGTGTGCAGTaGATGGGTTCTTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PKGKSVSPPERPGRCAREQGGVQ*MGSSFQ Trigger: CTGGAAGGAAGAACCCATCCACTGCACACCCCCTTG...TTCTCTTGCACATCTTCCTGGTCTTTCTGGTGGCGACACTGATTTCCCTTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR TCA 90 bp | AAGGGAAATCAGTGTCGCCACCAGAAAGACCAGGAAGATGTGCAAGAGAAGCTGTGCAGTGTACCATGCTaGAGTGGCCACAGGAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: KGNQCRHQKDQEDVQEKLCSVPC*SGHRKY Trigger: GTACTTCCTGTGGCCACTTCAGCATGGTACACTGCA...CAGCTTCTCTTGCACATCTTCCTGGTCTTTCTGGTGGCGACACTGATTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR GCA 90 bp | GAATTCCACAGAGACAAGGATTTTGCAAGGTCACTAAGGCCCTGTGTTCCTAAGGTTCTTCCTTCCAGATaGTCTTCAGCCGCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: EFHRDKDFARSLRPCVPKVLPSR*SSAAGP Trigger: GGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAAC...CTTAGGAACACAGGGCCTTAGTGACCTTGCAAAATCCTTGTCTCTGTGGAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR GCA 90 bp | ACACCCCAGGTCTGTACCAGGACTTTGGGATCCCAAGCTGTTTTCAAGCTGTTTAGTACCAAGGGGGTGTaGAGTGGATGGGTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TPQVCTRTLGSQAVFKLFSTKGV*SGWVLP Trigger: AGGAAGAACCCATCCACTGCACACCCCCTTGGTACT...AAACAGCTTGAAAACAGCTTGGGATCCCAAAGTCCTGGTACAGACCTGGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAAGGGGGTGTGCAGTaGATGGGTTCTTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTQGGVQ*MGSSFQ Trigger: CTGGAAGGAAGAACCCATCCACTGCACACCCCCTTG...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| 3UTR CAA 72 bp | ATAAAGAAGAGAGCACTGGCTGCAATTCCAGAGGACTaGGGTTCAATTCCCAGTACCCACCCGTCAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: IKKRALAAIPED*GSIPSTHPSAH Trigger: GTGAGCTGACGGGTGGGTACTGGGAATTGAACCCAAGTCCTCTGGAATTGCAGCCAGTGCTCTCTTCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR TCA 90 bp | CCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTGGTGTGCATAGACGATaGGCACTTTCTTACCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PPSLCTCCRSLTVLLVSCGVHRR*ALSYLP Trigger: TGGCAGGTAAGAAAGTGCTCATCGTCTATGCACACC...ACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | AGACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCGTTCTTCCTTCCAGATaGTCTTCAGCCGCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RHSLVGTVKYISGYNTTFVLPSR*SSAAGP Trigger: GGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAAC...GAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTAGTACCAAGGGGGTGTaGAGTGGATGGGTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTSTKGV*SGWVLP Trigger: AGGAAGAACCCATCCACTGCACACCCCCTTGGTACT...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | CTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAGTACCAAGGGGGTGTaGAGTGGATGGGTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLFAHAVGLSLCCLSAVLSTKGV*SGWVLP Trigger: AGGAAGAACCCATCCACTGCACACCCCCTTGGTACT...GAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR TCA 90 bp | TGTAGACTAAAGCCTTTGGTTTTCTTGCCAGATGGTCTCAGTGGTGCTGGACCAGGTGTGCATAGACGATaGGCACTTTCTTACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRLKPLVFLPDGLSGAGPGVHRR*ALSYLP Trigger: TGGCAGGTAAGAAAGTGCTCATCGTCTATGCACACC...TGGTCCAGCACCACTGAGACCATCTGGCAAGAAAACCAAAGGCTTTAGTCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR TCA 90 bp | CTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCGGTGTGCATAGACGATaGGCACTTTCTTACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFAHAVGLSLCCLSAVLGVHRR*ALSYLP Trigger: TGGCAGGTAAGAAAGTGCTCATCGTCTATGCACACC...GAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS-3UTR TCA 90 bp | GAGGGCCATGTCTCAGCTCTAATCCTACATCTGCCTCTTTATAGCTGTGACCCTACCGGAAATCTCCACTaGCCCCATCTTTTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: EGHVSALILHLPLYSCDPTGNLH*PHLLCT Trigger: TGTACACAAAAGATGGGGTCAGTGGAGATTTCCGGT...AGGGTCACAGCTATAAAGAGGCAGATGTAGGATTAGAGCTGAGACATGGCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
||
| CDS-3UTR TCA 90 bp | CCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACCGGAAATCTCCACTaGCCCCATCTTTTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLCTCCRSLTVLLVSCTGNLH*PHLLCT Trigger: TGTACACAAAAGATGGGGTCAGTGGAGATTTCCGGT...ACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS-3UTR TCA 90 bp | CATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAGAGCACAAAATTGCAGTGTACCATGCTaGAGTGGCCACAGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HAVGLSLCCLSAVLRAQNCSVPC*SGHRKY Trigger: GTACTTCCTGTGGCCACTTCAGCATGGTACACTGCA...ATTTTGTGCTCTGAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCTGTGCATCCCTGCTTaGTCAGTTCTTCAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTLCIPA*SVLQQP Trigger: TGGCTGTTGAAGAACTGAGCAAGCAGGGATGCACAG...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
||
| CDS-3UTR GCA 90 bp | ACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTGTTCTTCCTTCCAGATaGTCTTCAGCCGCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: THWWALLNTSQDTTPPSLVLPSR*SSAAGP Trigger: GGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAAC...AAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAGAGCACAAAATAGTACCAAGGGGGTGTaGAGTGGATGGGTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAVGLSLCCLSAVLRAQNSTKGV*SGWVLP Trigger: AGGAAGAACCCATCCACTGCACACCCCCTTGGTACT...ATTTTGTGCTCTGAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | ACAACACCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCTGTACCATGCTGAAGTaGCCACAGGAAGTACCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTPPSLCTCCRSLTVLLVCTMLK*PQEVPE Trigger: TTCCGGTACTTCCTGTGGCCACTTCAGCATGGTACA...GACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | AGACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCGGGGTGTGCAGTGGATaGGTTCTTCCTTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RHSLVGTVKYISGYNTTFGVCSG*VLPSRC Trigger: GCATCTGGAAGGAAGAACCCATCCACTGCACACCCC...GAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | AGACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCCAAGGGGGTGTGCAGTaGATGGGTTCTTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHSLVGTVKYISGYNTTFQGGVQ*MGSSFQ Trigger: CTGGAAGGAAGAACCCATCCACTGCACACCCCCTTG...GAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTACCGGAAATCTCCACTaGCCCCATCTTTTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTTGNLH*PHLLCT Trigger: TGTACACAAAAGATGGGGTCAGTGGAGATTTCCGGT...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS-3UTR TCA 90 bp | GACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTTGCAGTGTACCATGCTaGAGTGGCCACAGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DTHWWALLNTSQDTTPPSCSVPC*SGHRKY Trigger: GTACTTCCTGTGGCCACTTCAGCATGGTACACTGCA...AGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | ACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTGGGGTGTGCAGTGGATaGGTTCTTCCTTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: THWWALLNTSQDTTPPSLGVCSG*VLPSRC Trigger: GCATCTGGAAGGAAGAACCCATCCACTGCACACCCC...AAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR TCA 90 bp | ACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTTGCAGTGTACCATGCTaGAGTGGCCACAGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: THWWALLNTSQDTTPPSLCSVPC*SGHRKY Trigger: GTACTTCCTGTGGCCACTTCAGCATGGTACACTGCA...AAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | GACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTGTGCATCCCTGCTTaGTCAGTTCTTCAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTHWWALLNTSQDTTPPSLCIPA*SVLQQP Trigger: TGGCTGTTGAAGAACTGAGCAAGCAGGGATGCACAG...AGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | CATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAGAGCACAAAATGTGACTGTGCATCCCTaGTTGCTCAGTTCTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HAVGLSLCCLSAVLRAQNVTVHP*LLSSST Trigger: TGTTGAAGAACTGAGCAAGCAGGGATGCACAGTCAC...ATTTTGTGCTCTGAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | ACACCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCAGACCAAAACTGATCTaGGGGGCAAGGACTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLCTCCRSLTVLLVSRPKLI*GARTLN Trigger: ATTTAAAGTCCTTGCCCCCCAGATCAGTTTTGGTCT...GCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS-3UTR TCA 90 bp | AGACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCACCGGAAATCTCCACTaGCCCCATCTTTTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RHSLVGTVKYISGYNTTFTGNLH*PHLLCT Trigger: TGTACACAAAAGATGGGGTCAGTGGAGATTTCCGGT...GAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | CCCAAAGGGAAATCAGTGTCGCCACCAGAAAGACCAGGAAGATGTGCAAGAGAAACAAGATCAGCTTCTTaGACCTTTCTCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKGKSVSPPERPGRCARETRSAS*TFLCSS Trigger: TGAAGAACAGAGAAAGGTGCAAGAAGCTGATCTTGT...TTCTCTTGCACATCTTCCTGGTCTTTCTGGTGGCGACACTGATTTCCCTTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTAGAGTCATAAAAGCCTaGGATATCAAAGGCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTRVIKA*DIKGKP Trigger: GGGTTTGCCTTTGATATCCCAGGCTTTTATGACTCT...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | ACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTTGTACCATGCTGAAGTaGCCACAGGAAGTACCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: THWWALLNTSQDTTPPSLCTMLK*PQEVPE Trigger: TTCCGGTACTTCCTGTGGCCACTTCAGCATGGTACA...AAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR CCA 90 bp | CTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAGACCAAAACTGATCTaGGGGGCAAGGACTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFAHAVGLSLCCLSAVLRPKLI*GARTLN Trigger: ATTTAAAGTCCTTGCCCCCCAGATCAGTTTTGGTCT...GAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR TCA 90 bp | ACACCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCGAGCTAATTTACCCTTaGGAAAACCAGAGTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPPSLCTCCRSLTVLLVSELIYP*ENQSHK Trigger: TTTATGACTCTGGTTTTCTCAAGGGTAAATTAGCTC...GCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS-3UTR GCA 90 bp | ACAACACCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCACAAGATCAGCTTCTTaGACCTTTCTCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPPSLCTCCRSLTVLLVTRSAS*TFLCSS Trigger: TGAAGAACAGAGAAAGGTGCAAGAAGCTGATCTTGT...GACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| 3UTR CAA 72 bp | GCTAATCTATTGGTTAGGGACAGCCTCCTGATCCAGTaGTCATTAGAAATGCTCTCAGACACATCAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ANLLVRDSLLIQ*SLEMLSDTSEI Trigger: GATCTCTGATGTGTCTGAGAGCATTTCTAATGACAACTGGATCAGGAGGCTGTCCCTAACCAATAGATTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR GCA 90 bp | CAGCAAGAAAGGGCTTTATTTCTCAGGTCTGATCAGTCCCTGAATTTAATTTCCGTGACTGTGCATCCCTaGTTGCTCAGTTCTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QQERALFLRSDQSLNLISVTVHP*LLSSST Trigger: TGTTGAAGAACTGAGCAAGCAGGGATGCACAGTCAC...GGAAATTAAATTCAGGGACTGATCAGACCTGAGAAATAAAGCCCTTTCTTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR CCA 90 bp | AGACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCAGAGTCATAAAAGCCTaGGATATCAAAGGCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: RHSLVGTVKYISGYNTTFRVIKA*DIKGKP Trigger: GGGTTTGCCTTTGATATCCCAGGCTTTTATGACTCT...GAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| 3UTR CAA 72 bp | TTTCTCCAAGGATGCTATACCACCTCCATCATGGAATaGCTCACAAACCACCTAATTCCTAATCCCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQGCYTTSIME*LTNHLIPNPCV Trigger: AACACAGGGATTAGGAATTAGGTGGTTTGTGAGCAATTCCATGATGGAGGTGGTATAGCATCCTTGGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR CCA 90 bp | ACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTAGAGTCATAAAAGCCTaGGATATCAAAGGCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: THWWALLNTSQDTTPPSLRVIKA*DIKGKP Trigger: GGGTTTGCCTTTGATATCCCAGGCTTTTATGACTCT...AAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| 3UTR CAA 72 bp | CACAGTTTCAGCCCATTGAGAGCTATTCATATCATCTaGGAGAGGAAGAAAAGGGAATTCCTGAAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSFSPLRAIHII*ERKKREFLKRL Trigger: TAACCTCTTCAGGAATTCCCTTTTCTTCCTCTCCAAGATGATATGAATAGCTCTCAATGGGCTGAAACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
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| CDS-3UTR GCA 90 bp | TCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTTGACAAGATCAGCTTCTTaGACCTTTCTCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVGTVKYISGYNTTFSLTRSAS*TFLCSS Trigger: TGAAGAACAGAGAAAGGTGCAAGAAGCTGATCTTGT...CAAAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGAAAGGGCTTTATTTCTCAGGTCTGATCAGTCCCTGAATTTAATTTCCAGACCAAAACTGATCTaGGGGGCAAGGACTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QQERALFLRSDQSLNLISRPKLI*GARTLN Trigger: ATTTAAAGTCCTTGCCCCCCAGATCAGTTTTGGTCT...GGAAATTAAATTCAGGGACTGATCAGACCTGAGAAATAAAGCCCTTTCTTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAGGGACCACCACTGTGAAAACAACATATCTCAGCATAAGGACACAATAGAGCTAATTTACCCTTaGGAAAACCAGAGTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRRDHHCENNISQHKDTIELIYP*ENQSHK Trigger: TTTATGACTCTGGTTTTCTCAAGGGTAAATTAGCTC...TATTGTGTCCTTATGCTGAGATATGTTGTTTTCACAGTGGTGGTCCCTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
||
| 3UTR CAA 72 bp | GGTGAAAAGTTTATTTTAGCTCACAGTTTCAGCCCATaGAGAGCTATTCATATCATCTTGGAGAGGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEKFILAHSFSP*RAIHIILERKK Trigger: TTTCTTCCTCTCCAAGATGATATGAATAGCTCTCAATGGGCTGAAACTGTGAGCTAAAATAAACTTTTCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
||
| 3UTR CAA 72 bp | TACTACACACTGAACTCATCTCGGGAGAAAAGGATTTaGATAACTTGTATGGCTTTAAGTTTTGCTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YYTLNSSREKRI*ITCMALSFASF Trigger: AAAACTAGCAAAACTTAAAGCCATACAAGTTATCAAAATCCTTTTCTCCCGAGATGAGTTCAGTGTGTAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058978.9 |
||
| CDS GCA 90 bp | GGAAGTACCAAGGGGGTGTGCAGTGGATGGGTTCTTCCTTCCAGATaGTCTTCAGCCGCTGGGCCCATGATGCCAGCATCACTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSTKGVCSGWVLPSR*SSAAGPMMPASLSF Trigger: AAAGGAAAGTGATGCTGGCATCATGGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAACCCATCCACTGCACACCCCCTTGGTACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
||
| CDS TCA 90 bp | GTGTACCATGCTGAAGTGGCCACAGGAAGTACCGGAAATCTCCACTaGCCCCATCTTTTGTGTACATCTCCGCTGTACCTCCCGTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VYHAEVATGSTGNLH*PHLLCTSPLYLPWL Trigger: TAACCACGGGAGGTACAGCGGAGATGTACACAAAAGATGGGGTCAGTGGAGATTTCCGGTACTTCCTGTGGCCACTTCAGCATGGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 ENSMUST00000223479.2 |
||
| CDS-3UTR CAA 90 bp | ACACCACCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTTCTTCAGGGACCCATaGAAGGACTTGGGTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPPSLCTCCRSLTVLLVSFFRDP*KDLGSW Trigger: CCAAGAACCCAAGTCCTTCAATGGGTCCCTGAAGAA...GCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGGTGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTGAAGGACTTGGGTTCTaGGTGTGCATAGACGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLCTCCRSLTVLLVSCTEGLGF*VCIDDE Trigger: CTCATCGTCTATGCACACCAAGAACCCAAGTCCTTC...AGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCAGAGCACAAAATGAAGGACTTGGGTTCTaGGTGTGCATAGACGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HAVGLSLCCLSAVLRAQNEGLGF*VCIDDE Trigger: CTCATCGTCTATGCACACCAAGAACCCAAGTCCTTC...ATTTTGTGCTCTGAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
||
| CDS-3UTR CAA 90 bp | GACACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTGAAGGACTTGGGTTCTaGGTGTGCATAGACGATGAG | + |
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Preference number: 5 (lower is better) Translates to: DTHWWALLNTSQDTTPPSEGLGF*VCIDDE Trigger: CTCATCGTCTATGCACACCAAGAACCCAAGTCCTTC...AGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTTGCACATGCTGTAGGTCTCTCACTGTGTTGCTTGTCAGCTGTACTCCATTTCTTGTGGCCCTaGGCTCAAAGTTCATGCTAT | + |
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Preference number: 5 (lower is better) Translates to: LLFAHAVGLSLCCLSAVLHFLWP*AQSSCY Trigger: ATAGCATGAACTTTGAGCCAAGGGCCACAAGAAATG...GAGTACAGCTGACAAGCAACACAGTGAGAGACCTACAGCATGTGCAAAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS-3UTR CAA 90 bp | TCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTTGTTCTTCAGGGACCCATaGAAGGACTTGGGTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SLVGTVKYISGYNTTFSLFFRDP*KDLGSW Trigger: CCAAGAACCCAAGTCCTTCAATGGGTCCCTGAAGAA...CAAAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS TCA 90 bp | GGCACAGCACCCTATCCATCCAACCTTTTAGGATTGCTGGAACGCTaGACCAGTATAGTGGAAACTGAAATATCACAAGATCAGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: GTAPYPSNLLGLLER*TSIVETEISQDQLL Trigger: AAGAAGCTGATCTTGTGATATTTCAGTTTCCACTATACTGGTTCAGCGTTCCAGCAATCCTAAAAGGTTGGATGGATAGGGTGCTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 ENSMUST00000223479.2 |
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| CDS-3UTR CAA 90 bp | ACTCATTGGTGGGCACTGTTAAATACATCTCAGGATACAACACCACCTTCTCTTCATTTCTTGTGGCCCTaGGCTCAAAGTTCATGCTAT | + |
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Preference number: 5 (lower is better) Translates to: THWWALLNTSQDTTPPSLHFLWP*AQSSCY Trigger: ATAGCATGAACTTTGAGCCAAGGGCCACAAGAAATG...AAGAGAAGGTGGTGTTGTATCCTGAGATGTATTTAACAGTGCCCACCAATGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 |
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| CDS TCA 90 bp | CAACCTTTTAGGATTGCTGGAACGCTGAACCAGTATAGTGGAAACTaGAATATCACAAGATCAGCTTCTTGCACCTTTCTCTGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QPFRIAGTLNQYSGN*NITRSASCTFLCSS Trigger: TGAAGAACAGAGAAAGGTGCAAGAAGCTGATCTTGTGATATTTCAGTTTCCACTATACTGGTTCAGCGTTCCAGCAATCCTAAAAGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 ENSMUST00000223479.2 |
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| CDS GCA 72 bp | AAGGGGGTGTGCAGTGGATGGGTTCTTCCTTCCAGATaGTCTTCAGCCGCTGGGCCCATGATGCCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: KGVCSGWVLPSR*SSAAGPMMPAS Trigger: TGATGCTGGCATCATGGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAACCCATCCACTGCACACCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS CCA 72 bp | TGGATGGGTTCTTCCTTCCAGATGCTCTTCAGCCGCTaGGCCCATGATGCCAGCATCACTTTCCTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WMGSSFQMLFSR*AHDASITFLSS Trigger: AGAAGAAAGGAAAGTGATGCTGGCATCATGGGCCCAGCGGCTGAAGAGCATCTGGAAGGAAGAACCCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 |
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| CDS CAA 72 bp | CACTTTCTTCAGGGACCCATTGAAGGACTTGGGTTCTaGGTGTGCATAGACGATGAGCACTTTCTTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: HFLQGPIEGLGF*VCIDDEHFLTC Trigger: GCAGGTAAGAAAGTGCTCATCGTCTATGCACACCAAGAACCCAAGTCCTTCAATGGGTCCCTGAAGAAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000222740.2 ENSMUST00000223479.2 |
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| CDS TCA 72 bp | AGGATTGCTGGAACGCTGAACCAGTATAGTGGAAACTaGAATATCACAAGATCAGCTTCTTGCACCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RIAGTLNQYSGN*NITRSASCTFL Trigger: GAGAAAGGTGCAAGAAGCTGATCTTGTGATATTTCAGTTTCCACTATACTGGTTCAGCGTTCCAGCAATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 ENSMUST00000223479.2 |
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| CDS TCA 72 bp | CTCCCGTGGTTAAGGAAAGGAGAGCTAATTTACCCTTaGGAAAACCAGAGTCATAAAAGCCTGGGATATCAA | + |
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Preference number: 6 (lower is better) Translates to: LPWLRKGELIYP*ENQSHKSLGYQ Trigger: TTGATATCCCAGGCTTTTATGACTCTGGTTTTCTCAAGGGTAAATTAGCTCTCCTTTCCTTAACCACGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 ENSMUST00000223479.2 |
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| CDS TCA 72 bp | CCCTATCCATCCAACCTTTTAGGATTGCTGGAACGCTaGACCAGTATAGTGGAAACTGAAATATCACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: PYPSNLLGLLER*TSIVETEISQD Trigger: ATCTTGTGATATTTCAGTTTCCACTATACTGGTTCAGCGTTCCAGCAATCCTAAAAGGTTGGATGGATAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021843.13 ENSMUST00000058978.9 ENSMUST00000220844.2 ENSMUST00000222740.2 ENSMUST00000223479.2 |
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