Pregenerated sensors for NPY6R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038071Ensembl transcript IDs: ENSMUST00000042747.4
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCTATGGCTGAATGGAGTAGACATGCTTAACTTAAAGCAAAACTaGGCCCAAAGATATTATGTGTTTAAGTCTGGCTTCCTCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: VLWLNGVDMLNLKQN*AQRYYVFKSGFLCT Trigger: GGTGCAGAGGAAGCCAGACTTAAACACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTTAAGCATGTCTACTCCATTCAGCCATAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR GCA 90 bp | GGGCCCAAAGATATTATGTGTTTAAGTCTGGCTTCCTCTGCACCTTaGCCTATTCCATACTATTTCTTCTCTTTCTTTCATAACAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: GPKDIMCLSLASSAP*PIPYYFFSFFHNRR Trigger: CCTTCTGTTATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGCAGAGGAAGCCAGACTTAAACACATAATATCTTTGGGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR TCA 90 bp | TTGAATAGTTATGTGATTGCAAGTTATAGTCTCATATGCGAAAGTTaGATTTCTTTGATGCAAAGGAGGCATAGTATGGGTTTTTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LNSYVIASYSLICES*ISLMQRRHSMGFSC Trigger: GCAGGAAAAACCCATACTATGCCTCCTTTGCATCAAAGAAATTCAACTTTCGCATATGAGACTATAACTTGCAATCACATAACTATTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR-3UTR GCA 90 bp | GTAGACATGCTTAACTTAAAGCAAAACTGGGCCCAAAGATATTATGTGTTTAAGGCTTCCTCTGCACCTTaGCCTATTCCATACTATTTC | + |
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Preference number: 2 (lower is better) Translates to: VDMLNLKQNWAQRYYVFKASSAP*PIPYYF Trigger: GAAATAGTATGGAATAGGGCAAGGTGCAGAGGAAGC...CTTAAACACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTTAAGCATGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR CAA 90 bp | TTTGTACCCCAGACATCTCTGCTGTCCTTGTATGCTCTCTCATTTTaGTTCTCTTCCTCAGTAATGATGTCTAGGTTGTTTAAGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: FVPQTSLLSLYALSF*FSSSVMMSRLFKLL Trigger: TAATAACTTAAACAACCTAGACATCATTACTGAGGAAGAGAACAAAAATGAGAGAGCATACAAGGACAGCAGAGATGTCTGGGGTACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCAGTTTACAAAGTTATAACGAACCCCTGCTTAATATACATAAAGACATCTCTGCTGTCCTTGTATaGTCTCTCATTTTTGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SPSLQSYNEPLLNIHKDISAVLV*SLIFVL Trigger: GAGAACAAAAATGAGAGAGCATACAAGGACAGCAGA...GATGTCTTTATGTATATTAAGCAGGGGTTCGTTATAACTTTGTAAACTGGGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCAGTTTACAAAGTTATAACGAACCCCTGCTTAATATACATAAAGACATCAACTTAAAGCAAAACTaGGCCCAAAGATATTATGTG | + |
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Preference number: 2 (lower is better) Translates to: SPSLQSYNEPLLNIHKDINLKQN*AQRYYV Trigger: CACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTT...GATGTCTTTATGTATATTAAGCAGGGGTTCGTTATAACTTTGTAAACTGGGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR TCA 72 bp | CAAGTTATAGTCTCATATGCGAAAGTTGAATTTCTTTaGTGCAAAGGAGGCATAGTATGGGTTTTTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: QVIVSYAKVEFL*CKGGIVWVFPA Trigger: GGCAGGAAAAACCCATACTATGCCTCCTTTGCATCAAAGAAATTCAACTTTCGCATATGAGACTATAACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR CCA 72 bp | CTGAATGGAGTAGACATGCTTAACTTAAAGCAAAACTaGGCCCAAAGATATTATGTGTTTAAGTCTGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LNGVDMLNLKQN*AQRYYVFKSGF Trigger: GAAGCCAGACTTAAACACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTTAAGCATGTCTACTCCATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR GCA 72 bp | GATATTATGTGTTTAAGTCTGGCTTCCTCTGCACCTTaGCCTATTCCATACTATTTCTTCTCTTTCTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: DIMCLSLASSAP*PIPYYFFSFFH Trigger: ATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGCAGAGGAAGCCAGACTTAAACACATAATATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR CCA 72 bp | AAAAGAAAGGGTAGGGATAAATCTCTGTGTGTTCTATaGCTGAATGGAGTAGACATGCTTAACTTAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: KRKGRDKSLCVL*LNGVDMLNLKQ Trigger: TTGCTTTAAGTTAAGCATGTCTACTCCATTCAGCCATAGAACACACAGAGATTTATCCCTACCCTTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCACAACTAATAACTTTCTAGCTATTCCAGCGAATAACGTGAATTTTGTATATGCTCTCTCATTTTaGTTCTCTTCCTCAGTAATG | + |
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Preference number: 3 (lower is better) Translates to: CSTTNNFLAIPANNVNFVYALSF*FSSSVM Trigger: CATTACTGAGGAAGAGAACAAAAATGAGAGAGCATA...TACAAAATTCACGTTATTCGCTGGAATAGCTAGAAAGTTATTAGTTGTGCTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CCA 90 bp | GTCTGGCTTCCTCTGCACCTTGCCCTATTCCATACTATTTCTTCTCTTTCTTTCACAAATACCAGGTCGTaGTGGCAGCTCATCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: VWLPLHLALFHTISSLSFTNTRS*WQLISI Trigger: GATGCTGATGAGCTGCCACCACGACCTGGTATTTGT...GAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGCAGAGGAAGCCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR TCA 90 bp | GTCTGGCTTCCTCTGCACCTTGCCCTATTCCATACTATTTCTTCTCTTTCTTTCCCCTCTTGTTCTCATTaGGACGGCTCTTATTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VWLPLHLALFHTISSLSFPSCSH*DGSYFP Trigger: AGGAAAATAAGAGCCGTCTCAATGAGAACAAGAGGG...GAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGCAGAGGAAGCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCAGTTTACAAAGTTATAACGAACCCCTGCTTAATATACATAAAGACATCAGGCATGAGCTACTCTaGGTTTCCAGCCACGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPSLQSYNEPLLNIHKDIRHELL*VSSHGG Trigger: ACCCCCGTGGCTGGAAACCCAGAGTAGCTCATGCCT...GATGTCTTTATGTATATTAAGCAGGGGTTCGTTATAACTTTGTAAACTGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR GCA 90 bp | GCACCTTGCCCTATTCCATACTATTTCTTCTCTTTCTTTCATAACAGAAGGGCTTTTCTCCTGTCCACCTaGCTAGTTCTTTTTCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: APCPIPYYFFSFFHNRRAFLLST*LVLFRR Trigger: CCTCCGAAAAAGAACTAGGCAGGTGGACAGGAGAAA...AGCCCTTCTGTTATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCATAGTATGGGTTTTTCCTGCCTGCAGCACAACTAATAACTTTCTAGCTGTAGAAAAGAGGAGTTaGTTCAGTTTAGAAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GGIVWVFPACSTTNNFLAVEKRS*FSLEGQ Trigger: TTGGCCTTCTAAACTGAACCAACTCCTCTTTTCTAC...AGCTAGAAAGTTATTAGTTGTGCTGCAGGCAGGAAAAACCCATACTATGCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCAGTTTACAAAGTTATAACGAACCCCTGCTTAATATACATAAAGACATCGAAAGGGCTCATTGGTaGGGTGGTAGGACAGGAATA | + |
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Preference number: 4 (lower is better) Translates to: SPSLQSYNEPLLNIHKDIERAHW*GGRTGI Trigger: TATTCCTGTCCTACCACCTCACCAATGAGCCCTTTC...GATGTCTTTATGTATATTAAGCAGGGGTTCGTTATAACTTTGTAAACTGGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CCA 90 bp | TGCCCTATTCCATACTATTTCTTCTCTTTCTTTCATAACAGAAGGGCTTTGATTAATACCAGGTCGTGGTaGCAGCTCATCAGCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: CPIPYYFFSFFHNRRALINTRSW*QLISIS Trigger: TGAGATGCTGATGAGCTGCCACCACGACCTGGTATT...AATCAAAGCCCTTCTGTTATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCAGTTTACAAAGTTATAACGAACCCCTGCTTAATATACATAAAGACATCTATGGACACAGAAACTaGGACACTTTGCACGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPSLQSYNEPLLNIHKDIYGHRN*DTLHVG Trigger: TCCTACGTGCAAAGTGTCTCAGTTTCTGTGTCCATA...GATGTCTTTATGTATATTAAGCAGGGGTTCGTTATAACTTTGTAAACTGGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCAGTTTACAAAGTTATAACGAACCCCTGCTTAATATACATAAAGACATCCTCATCAGCATCTCATaGTACCAGTCGAAGATGACA | + |
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Preference number: 4 (lower is better) Translates to: SPSLQSYNEPLLNIHKDILISIS*YQSKMT Trigger: TGTCATCTTCGACTGGTATCATGAGATGCTGATGAG...GATGTCTTTATGTATATTAAGCAGGGGTTCGTTATAACTTTGTAAACTGGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CCA 90 bp | TGCCCTATTCCATACTATTTCTTCTCTTTCTTTCATAACAGAAGGGCTTTGATTACACAAGGGAGAATATaGACACAGAAACTGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: CPIPYYFFSFFHNRRALITQGRI*TQKLRH Trigger: GTGTCTCAGTTTCTGTGTCCATATTCTCCCTTGTGT...AATCAAAGCCCTTCTGTTATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR GCA 90 bp | GTAGACATGCTTAACTTAAAGCAAAACTGGGCCCAAAGATATTATGTGTTTAAGAAAATGCCGAGTTGTTaGTCTTGCCACTGGTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: VDMLNLKQNWAQRYYVFKKMPSC*SCHWFY Trigger: ATAAAACCAGTGGCAAGAGCAACAACTCGGCATTTT...CTTAAACACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTTAAGCATGTCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CCA 90 bp | GTAGACATGCTTAACTTAAAGCAAAACTGGGCCCAAAGATATTATGTGTTTAAGACCATAGCAATCAAGTaGCAAACTACAAATACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VDMLNLKQNWAQRYYVFKTIAIK*QTTNTR Trigger: CCTGGTATTTGTAGTTTGCCACTTGATTGCTATGGT...CTTAAACACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTTAAGCATGTCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR TCA 90 bp | TGCAGCACAACTAATAACTTTCTAGCTATTCCAGCGAATAACGTGAATTTTGTATTCCAAAAATGCCCATaGTTAGGATCACAGTATATG | + |
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Preference number: 4 (lower is better) Translates to: CSTTNNFLAIPANNVNFVFQKCP*LGSQYM Trigger: CATATACTGTGATCCTAATCATGGGCATTTTTGGAA...TACAAAATTCACGTTATTCGCTGGAATAGCTAGAAAGTTATTAGTTGTGCTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CAA 90 bp | GGAGGCATAGTATGGGTTTTTCCTGCCTGCAGCACAACTAATAACTTTCTAGCTATCACATTTACCCTCTaGTTCTCATTGAGACGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GGIVWVFPACSTTNNFLAITFTL*FSLRRL Trigger: GAGCCGTCTCAATGAGAACAAGAGGGTAAATGTGAT...AGCTAGAAAGTTATTAGTTGTGCTGCAGGCAGGAAAAACCCATACTATGCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CAA 90 bp | GCACCTTGCCCTATTCCATACTATTTCTTCTCTTTCTTTCATAACAGAAGGGCTTCAGAGAGGGACAGGTaGGCAATCAGTATGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: APCPIPYYFFSFFHNRRASERDR*AISMLV Trigger: TACCAACATACTGATTGCCAACCTGTCCCTCTCTGA...AGCCCTTCTGTTATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CAA 90 bp | GTCTGGCTTCCTCTGCACCTTGCCCTATTCCATACTATTTCTTCTCTTTCTTTCCAGTCGAAGATGACATaGAAAATGTTCAAGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: VWLPLHLALFHTISSLSFQSKMT*KMFKGN Trigger: GTTGCCCTTGAACATTTTCAATGTCATCTTCGACTG...GAAAGAAAGAGAAGAAATAGTATGGAATAGGGCAAGGTGCAGAGGAAGCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS TCA 90 bp | TCGTTCAATAGCAATCAACACAAGGGAGAATATGGACACAGAAACTaGGACACTTTGCACGTAGGAAGTGAGTTTACACATAGTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SFNSNQHKGEYGHRN*DTLHVGSEFTHSVP Trigger: GGGAACACTATGTGTAAACTCACTTCCTACGTGCAAAGTGTCTCAGTTTCTGTGTCCATATTCTCCCTTGTGTTGATTGCTATTGAACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CCA 90 bp | GGGACAAAATACTGGAGCATAAATAATGATGTAGAAAAGAGGAGTTaGTTCAGTTTAGAAGGCCAAATCTCCACACAAGCTACCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GTKYWSINNDVEKRS*FSLEGQISTQATWW Trigger: CCACCAGGTAGCTTGTGTGGAGATTTGGCCTTCTAAACTGAACCAACTCCTCTTTTCTACATCATTATTTATGCTCCAGTATTTTGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CAA 90 bp | GTAGACATGCTTAACTTAAAGCAAAACTGGGCCCAAAGATATTATGTGTTTAAGGCCGAGTTGTTGCTCTaGCCACTGGTTTTATTAGGT | + |
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Preference number: 5 (lower is better) Translates to: VDMLNLKQNWAQRYYVFKAELLL*PLVLLG Trigger: ACCTAATAAAACCAGTGGCAAGAGCAACAACTCGGC...CTTAAACACATAATATCTTTGGGCCCAGTTTTGCTTTAAGTTAAGCATGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS-3UTR CAA 90 bp | TGCCCTATTCCATACTATTTCTTCTCTTTCTTTCATAACAGAAGGGCTTTGATTACCCTCTTGTTCTCATaGAGACGGCTCTTATTTTCC | + |
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Preference number: 5 (lower is better) Translates to: CPIPYYFFSFFHNRRALITLLFS*RRLLFS Trigger: GGAAAATAAGAGCCGTCTCAATGAGAACAAGAGGGT...AATCAAAGCCCTTCTGTTATGAAAGAAAGAGAAGAAATAGTATGGAATAGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CCA 72 bp | TCAAGGGCAACCAGCAGGCTCCAAAAGTCACTACGATaGAAATCAACATCACATTTACCCTCTTGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRATSRLQKSLR*KSTSHLPSCSH Trigger: ATGAGAACAAGAGGGTAAATGTGATGTTGATTTCCATCGTAGTGACTTTTGGAGCCTGCTGGTTGCCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CCA 72 bp | AGAGGATTTATGCAAGTAGAAACCATAGCAATCAAGTaGCAAACTACAAATACCAGGTCGTGGTGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RGFMQVETIAIK*QTTNTRSWWQL Trigger: GAGCTGCCACCACGACCTGGTATTTGTAGTTTGCCACTTGATTGCTATGGTTTCTACTTGCATAAATCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CAA 90 bp | GCTCCAAAAGTCACTACGATGGAAATCAACATCACATTTACCCTCTaGTTCTCATTGAGACGGCTCTTATTTTCCTTTCTCCTGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: APKVTTMEINITFTL*FSLRRLLFSFLLST Trigger: GGTGGACAGGAGAAAGGAAAATAAGAGCCGTCTCAATGAGAACAAGAGGGTAAATGTGATGTTGATTTCCATCGTAGTGACTTTTGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CAA 72 bp | ATGGAAATCAACATCACATTTACCCTCTTGTTCTCATaGAGACGGCTCTTATTTTCCTTTCTCCTGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: MEINITFTLLFS*RRLLFSFLLST Trigger: GGTGGACAGGAGAAAGGAAAATAAGAGCCGTCTCAATGAGAACAAGAGGGTAAATGTGATGTTGATTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CAA 72 bp | GTCACTACGATGGAAATCAACATCACATTTACCCTCTaGTTCTCATTGAGACGGCTCTTATTTTCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VTTMEINITFTL*FSLRRLLFSFL Trigger: GAGAAAGGAAAATAAGAGCCGTCTCAATGAGAACAAGAGGGTAAATGTGATGTTGATTTCCATCGTAGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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| CDS CCA 72 bp | TACTGGAGCATAAATAATGATGTAGAAAAGAGGAGTTaGTTCAGTTTAGAAGGCCAAATCTCCACACAAGCT | + |
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Preference number: 6 (lower is better) Translates to: YWSINNDVEKRS*FSLEGQISTQA Trigger: AGCTTGTGTGGAGATTTGGCCTTCTAAACTGAACCAACTCCTCTTTTCTACATCATTATTTATGCTCCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042747.4 |
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