Pregenerated sensors for NPY5R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044014Ensembl transcript IDs: ENSMUST00000070810.8, ENSMUST00000211920.2, ENSMUST00000212563.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGAGACAGAGGTCAGGGTaGAAGGGGAGCAAAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRRQRSG*KGSKTG Trigger: TCCTGTTTTGCTCCCCTTTCACCCTGACCTCTGTCT...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGACCACGTGGAAGACGTaGAGTGGCATCCAGCTAACA | + |
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Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRTTWKT*SGIQLT Trigger: TGTTAGCTGGATGCCACTCCACGTCTTCCACGTGGT...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | TATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCAGACAGAGGTCAGGGTaGAAGGGGAGCAAAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: YASISTDVLWAVSTFLLSRQRSG*KGSKTG Trigger: TCCTGTTTTGCTCCCCTTTCACCCTGACCTCTGTCT...GGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGACTGAAGGAATGGCATaGTATGGCACATGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRTEGMA*YGTWLC Trigger: GCAAAGCCATGTGCCATATCATGCCATTCCTTCAGT...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGCATCTCCTGAGCATCTaGGCTTTCTTCAGGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRHLLSI*AFFRFH Trigger: GTGAAACCTGAAGAAAGCTCAGATGCTCAGGAGATG...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | TATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCTGGAACGGTTAGGTaGTTCTCCTGGGAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YASISTDVLWAVSTFLLSSGTVR*FSWEGP Trigger: AGGACCTTCCCAGGAGAAGCACCTAACCGTTCCAGA...GGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | CAGAACAGCTGGATTAATCTGACAATTTTACCAGTCTTCAATAATAGGAGTGGAGTTAGGTGCTTCTCCTaGGAAGGTCCTGCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QNSWINLTILPVFNNRSGVRCFS*EGPAGA Trigger: CGCCCCAGCAGGACCTTCCCAGGAGAAGCACCTAAC...TCCACTCCTATTATTGAAGACTGGTAAAATTGTCAGATTAATCCAGCTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070810.8 |
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| CDS-3UTR CCA 90 bp | GTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTGTTAGGTGCTTCTCCTaGGAAGGTCCTGCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VNYASISTDVLWAVSTFLVRCFS*EGPAGA Trigger: CGCCCCAGCAGGACCTTCCCAGGAGAAGCACCTAAC...AAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGTTGACTCTCATCTCCTaGGCATCTGAGCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRLTLIS*ASELSS Trigger: TGAAGAAAGCTCAGATGCTCAGGAGATGAGAGTCAA...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCAGTTCCACAAGGCTGTaGAACACTGGGAGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSSSTRL*NTGRGE Trigger: TTCTCCCCTCCCAGTGTTTCACAGCCTTGTGGAACT...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | AATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCAGTTCCACAAGGCTGTaGAACACTGGGAGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NYASISTDVLWAVSTFLLSSTRL*NTGRGE Trigger: TTCTCCCCTCCCAGTGTTTCACAGCCTTGTGGAACT...GAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGTGCTTTCTGATGAATaGGTAGCTCCACTTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASISTDVLWAVSTFLLSSVLSDE*VAPLLS Trigger: ACTCAAAAGTGGAGCTACTCATTCATCAGAAAGCAC...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | TATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCAAGTATTGTTCTCTGTaGCTCTGTAGTCCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YASISTDVLWAVSTFLLSKYCSL*LCSPPR Trigger: CCTGGGAGGACTACAGAGGCACAGAGAACAATACTT...GGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGCACACAAATACTTGCTaGTTAGCAATGCTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRHTNTC*LAMLSQ Trigger: TTGGCTCAGCATTGCTAAGCAGCAAGTATTTGTGTG...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGCAACACACAAATACTTaGTGCTTAGCAATGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASISTDVLWAVSTFLLSSQHTNT*CLAMLS Trigger: GCTCAGCATTGCTAAGCAGCAAGTATTTGTGTGTTG...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCTCTGGAACGGTTAGGTaGTTCTCCTGGGAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSSGTVR*FSWEGP Trigger: AGGACCTTCCCAGGAGAAGCACCTAACCGTTCCAGA...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCATAGTCCTCCCAGACTaGAAAGGCAGTGTTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSIVLPD*KGSVPS Trigger: GCTCGGAACACTGCCTTTCCAGTCTGGGAGGACTAT...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACCACGTGGAAGACGTaGAGTGGCATCCAGCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSTTWKT*SGIQLT Trigger: TGTTAGCTGGATGCCACTCCACGTCTTCCACGTGGT...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGTTCACTGTAGTCTTCTaGTTGCGCTTTTTCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRFTVVF*LRFFIT Trigger: TGTTATGAAAAAGCGCAATCAGAAGACTACAGTGAA...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | TATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCGGGTGCTTTATCATATaGTACCTGACAATGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: YASISTDVLWAVSTFLLSGCFII*YLTMAI Trigger: GATTGCCATTGTCAGGTATCATATGATAAAGCACCC...GGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCCATCTCCTGAGCATCTaGGCTTTCTTCAGGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSHLLSI*AFFRFH Trigger: GTGAAACCTGAAGAAAGCTCAGATGCTCAGGAGATG...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCTATGGCACATGGCTTTaGCGAACATCCACTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSYGTWL*RTSTDP Trigger: TGGATCAGTGGATGTTCGGCAAAGCCATGTGCCATA...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGAAGGGCTCTCAAGTCTaGTTTGATACCATTATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASISTDVLWAVSTFLLSSKGSQV*FDTIIK Trigger: CTTAATAATGGTATCAAAGCAGACTTGAGAGCCCTT...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCGACATGTGTAGGCAGTaGATAAGGGCTCTCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSDMCRQ*IRALKS Trigger: AGACTTGAGAGCCCTTATCCACTGCCTACACATGTC...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | AATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCGACATGTGTAGGCAGTaGATAAGGGCTCTCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NYASISTDVLWAVSTFLLDMCRQ*IRALKS Trigger: AGACTTGAGAGCCCTTATCCACTGCCTACACATGTC...GAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | GTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTAAGTATTGTTCTCTGTaGCTCTGTAGTCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VNYASISTDVLWAVSTFLKYCSL*LCSPPR Trigger: CCTGGGAGGACTACAGAGGCACAGAGAACAATACTT...AAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | GTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTTATGGCACATGGCTTTaGCGAACATCCACTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: VNYASISTDVLWAVSTFLYGTWL*RTSTDP Trigger: TGGATCAGTGGATGTTCGGCAAAGCCATGTGCCATA...AAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | AATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCGGGTGCTTTATCATATaGTACCTGACAATGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NYASISTDVLWAVSTFLLGCFII*YLTMAI Trigger: GATTGCCATTGTCAGGTATCATATGATAAAGCACCC...GAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCCAACACACAAATACTTaGTGCTTAGCAATGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSQHTNT*CLAMLS Trigger: GCTCAGCATTGCTAAGCAGCAAGTATTTGTGTGTTG...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | TATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCAGTCTGTTTTCTTTGTaGGACAATCCACAGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: YASISTDVLWAVSTFLLSSLFSL*DNPQLI Trigger: TATAAGCTGTGGATTGTCCCACAAAGAAAACAGACT...GGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR TCA 90 bp | CAGAACAGCTGGATTAATCTGACAATTTTACCAGTCTTCAATAATAGGAGTGGAGTGCTTTCTGATGAATaGGTAGCTCCACTTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSWINLTILPVFNNRSGVLSDE*VAPLLS Trigger: ACTCAAAAGTGGAGCTACTCATTCATCAGAAAGCAC...TCCACTCCTATTATTGAAGACTGGTAAAATTGTCAGATTAATCCAGCTGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070810.8 |
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| CDS-3UTR TCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCTTCACTGTAGTCTTCTaGTTGCGCTTTTTCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSFTVVF*LRFFIT Trigger: TGTTATGAAAAAGCGCAATCAGAAGACTACAGTGAA...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCAAGGGCTCTCAAGTCTaGTTTGATACCATTATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVYVNYASISTDVLWAVSKGSQV*FDTIIK Trigger: CTTAATAATGGTATCAAAGCAGACTTGAGAGCCCTT...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CCA 90 bp | AATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCAGTCTGTTTTCTTTGTaGGACAATCCACAGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: NYASISTDVLWAVSTFLLSLFSL*DNPQLI Trigger: TATAAGCTGTGGATTGTCCCACAAAGAAAACAGACT...GAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR GCA 90 bp | GTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTTACACCAGCTTGAAATaGCTATTGGAAATCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: VNYASISTDVLWAVSTFLYTSLK*LLEIRL Trigger: TAACCTGATTTCCAATAGGCATTTCAAGCTGGTGTA...AAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS CCA 90 bp | CTACGGACCGAGCCTGGGTTTTCTGGAACGGTTAGGTGCTTCTCCTaGGAAGGTCCTGCTGGGGCGGGTAACACGCATGCCGTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LRTEPGFSGTVRCFS*EGPAGAGNTHAVFL Trigger: CAAGAAGACGGCATGCGTGTTACCCGCCCCAGCAGGACCTTCCCAGGAGAAGCACCTAACCGTTCCAGAAAACCCAGGCTCGGTCCGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CCA 90 bp | AAGCAGATCGGGACCCCTGGAATAACCTTACTGGATGGTGACAGCTaGCTACGGACCGAGCCTGGGTTTTCTGGAACGGTTAGGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: KQIGTPGITLLDGDS*LRTEPGFSGTVRCF Trigger: GAAGCACCTAACCGTTCCAGAAAACCCAGGCTCGGTCCGTAGCCAGCTGTCACCATCCAGTAAGGTTATTCCAGGGGTCCCGATCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 90 bp | CTTTATTCTCGTGAGGGAACGCTTGACTCTCATCTCCTGAGCATCTaGGCTTTCTTCAGGTTTCACCTCAAAGCAGATCGGGACCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LYSREGTLDSHLLSI*AFFRFHLKADRDPW Trigger: CCAGGGGTCCCGATCTGCTTTGAGGTGAAACCTGAAGAAAGCTCAGATGCTCAGGAGATGAGAGTCAAGCGTTCCCTCACGAGAATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | CATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGACGCATGCCGTCTTCTaGCTGTACCTTCTTCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: HQLAQMYCGQSPHFFSPRTHAVF*LYLLRC Trigger: GCACCGAAGAAGGTACAGCAAGAAGACGGCATGCGT...CCGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGACGCATGCCGTCTTCTaGCTGTACCTTCTTCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ASISTDVLWAVSTFLLSSTHAVF*LYLLRC Trigger: GCACCGAAGAAGGTACAGCAAGAAGACGGCATGCGT...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS GCA 90 bp | CAAATGTATAGAGCCCAATCAGGAAGTATTGTAAGTCGTCTACGCTaGCTCTATAGTCCTCCCAGACTGGAAAGGCAGTGTTCCGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QMYRAQSGSIVSRLR*LYSPPRLERQCSEQ Trigger: CTGCTCGGAACACTGCCTTTCCAGTCTGGGAGGACTATAGAGGCAGCGTAGACGACTTACAATACTTCCTGATTGGGCTCTATACATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 90 bp | GATCTCTTCTTTATTCTCGTGAGGGAACGCTTGACTCTCATCTCCTaGGCATCTGAGCTTTCTTCAGGTTTCACCTCAAAGCAGATCGGG | + |
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Preference number: 5 (lower is better) Translates to: DLFFILVRERLTLIS*ASELSSGFTSKQIG Trigger: CCCGATCTGCTTTGAGGTGAAACCTGAAGAAAGCTCAGATGCTCAGGAGATGAGAGTCAAGCGTTCCCTCACGAGAATAAAGAAGAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CCA 90 bp | AAATGCCTATTGGAAATCAGGTTATCATTGAAATCGGTCACCACGTaGAAGACGTGGAGTGGCATCCAGCTAACAGCGAACACTAATATC | + |
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Preference number: 5 (lower is better) Translates to: KCLLEIRLSLKSVTT*KTWSGIQLTANTNI Trigger: GATATTAGTGTTCGCTGTTAGCTGGATGCCACTCCACGTCTTCCACGTGGTGACCGATTTCAATGATAACCTGATTTCCAATAGGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CCA 90 bp | TTGGAAATCAGGTTATCATTGAAATCGGTCACCACGTGGAAGACGTaGAGTGGCATCCAGCTAACAGCGAACACTAATATCAATATAGTC | + |
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Preference number: 5 (lower is better) Translates to: LEIRLSLKSVTTWKT*SGIQLTANTNINIV Trigger: GACTATATTGATATTAGTGTTCGCTGTTAGCTGGATGCCACTCCACGTCTTCCACGTGGTGACCGATTTCAATGATAACCTGATTTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | TATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGAGTCTGTTTTCTTaGTGGGACAATCCACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: YASISTDVLWAVSTFLLSSSLFS*WDNPQL Trigger: AAGCTGTGGATTGTCCCACAAAGAAAACAGACTCGA...GGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS TCA 90 bp | GCAATCGATATTAAAATCAGAGTTGAAACCAGAACTGATACACACTaGAGGAATGGCATGATATGGCACATGGCTTTGCCGAACATCCAC | + |
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Preference number: 5 (lower is better) Translates to: AIDIKIRVETRTDTH*RNGMIWHMALPNIH Trigger: GTGGATGTTCGGCAAAGCCATGTGCCATATCATGCCATTCCTTCAGTGTGTATCAGTTCTGGTTTCAACTCTGATTTTAATATCGATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 90 bp | CCATATAAGATCGGATTAAGACAACAGGACATCATGCCTAACAAGTaGCAGATGCAGTACACCAGCTTGAAATGCCTATTGGAAATCAGG | + |
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Preference number: 5 (lower is better) Translates to: PYKIGLRQQDIMPNK*QMQYTSLKCLLEIR Trigger: CCTGATTTCCAATAGGCATTTCAAGCTGGTGTACTGCATCTGTCACTTGTTAGGCATGATGTCCTGTTGTCTTAATCCGATCTTATATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGTCCGTGACAAATGTCTaGTTAAAATGCTCTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: ASISTDVLWAVSTFLLSSSVTNV*LKCSSS Trigger: ACTTGAAGAGCATTTTAACAAGACATTTGTCACGGA...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGGGATGTAGAGTTAAGTaGATCATCTCATTTTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: ASISTDVLWAVSTFLLSSGCRVK*IISFSS Trigger: CGAAGAAAATGAGATGATCAACTTAACTCTACATCC...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | GCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCCTCGAGCTTGAAATGCCTATaGGAAATCAGGTTATCATTG | + |
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Preference number: 5 (lower is better) Translates to: ASISTDVLWAVSTFLLSSSLKCL*EIRLSL Trigger: CAATGATAACCTGATTTCCAATAGGCATTTCAAGCT...CGAGGAGAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCTCAACACACAAATACTaGCTGCTTAGCAATGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: HVYVNYASISTDVLWAVSSTHKY*LLSNAE Trigger: CTCAGCATTGCTAAGCAGCAAGTATTTGTGTGTTGA...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | AATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCTCAACACACAAATACTaGCTGCTTAGCAATGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NYASISTDVLWAVSTFLLSTHKY*LLSNAE Trigger: CTCAGCATTGCTAAGCAGCAAGTATTTGTGTGTTGA...GAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | AATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTCTCATGCAGTACACCAGCTaGAAATGCCTATTGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: NYASISTDVLWAVSTFLLMQYTS*KCLLEI Trigger: GATTTCCAATAGGCATTTCAAGCTGGTGTACTGCAT...GAGAAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | CAGAACAGCTGGATTAATCTGACAATTTTACCAGTCTTCAATAATAGGAGTGGAATGCAGTACACCAGCTaGAAATGCCTATTGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: QNSWINLTILPVFNNRSGMQYTS*KCLLEI Trigger: GATTTCCAATAGGCATTTCAAGCTGGTGTACTGCAT...TCCACTCCTATTATTGAAGACTGGTAAAATTGTCAGATTAATCCAGCTGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070810.8 |
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| CDS TCA 90 bp | AACATACTAGAGGCAGGATATACTGAACTAACAATAAAGAGATTGTaGAAGCAATTCTGTATGAATCAGAGGGCCATGACTCAACACACA | + |
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Preference number: 5 (lower is better) Translates to: NILEAGYTELTIKRL*KQFCMNQRAMTQHT Trigger: TGTGTGTTGAGTCATGGCCCTCTGATTCATACAGAATTGCTTTCACAATCTCTTTATTGTTAGTTCAGTATATCCTGCCTCTAGTATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | CACGTTTATGTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCGGATGTAGAGTTAAGTaGATCATCTCATTTTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: HVYVNYASISTDVLWAVSGCRVK*IISFSS Trigger: CGAAGAAAATGAGATGATCAACTTAACTCTACATCC...GGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTACATAAACGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS-3UTR CAA 90 bp | CAGAACAGCTGGATTAATCTGACAATTTTACCAGTCTTCAATAATAGGAGTGGATCCGTGACAAATGTCTaGTTAAAATGCTCTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: QNSWINLTILPVFNNRSGSVTNV*LKCSSS Trigger: ACTTGAAGAGCATTTTAACAAGACATTTGTCACGGA...TCCACTCCTATTATTGAAGACTGGTAAAATTGTCAGATTAATCCAGCTGTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070810.8 |
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| CDS-3UTR CAA 90 bp | GTAAATTATGCATCAATTAGCACAGATGTATTGTGGGCAGTCTCCACATTTCTTAGCTTGAAATGCCTATaGGAAATCAGGTTATCATTG | + |
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Preference number: 5 (lower is better) Translates to: VNYASISTDVLWAVSTFLSLKCL*EIRLSL Trigger: CAATGATAACCTGATTTCCAATAGGCATTTCAAGCT...AAGAAATGTGGAGACTGCCCACAATACATCTGTGCTAATTGATGCATAATTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070810.8 ENSMUST00000212563.2 |
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| CDS CCA 72 bp | GAGCCTGGGTTTTCTGGAACGGTTAGGTGCTTCTCCTaGGAAGGTCCTGCTGGGGCGGGTAACACGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: EPGFSGTVRCFS*EGPAGAGNTHA Trigger: GGCATGCGTGTTACCCGCCCCAGCAGGACCTTCCCAGGAGAAGCACCTAACCGTTCCAGAAAACCCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | GCAGATCGGGACCCCTGGAATAACCTTACTGGATGGTaGCAGCTGGCTACGGACCGAGCCTGGGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ADRDPWNNLTGW*QLATDRAWVFW Trigger: CCAGAAAACCCAGGCTCGGTCCGTAGCCAGCTGTCACCATCCAGTAAGGTTATTCCAGGGGTCCCGATCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS GCA 72 bp | AGGCAGTGTTCCGAGCAGCAGAAGTATTGTTCTCTGTaGCTCTGTAGTCCTCCCAGGCAGGGGAGGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RQCSEQQKYCSL*LCSPPRQGRPC Trigger: ACACGGCCTCCCCTGCCTGGGAGGACTACAGAGGCACAGAGAACAATACTTCTGCTGCTCGGAACACTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CCA 72 bp | GGGACCCCTGGAATAACCTTACTGGATGGTGACAGCTaGCTACGGACCGAGCCTGGGTTTTCTGGAACGGTT | + |
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Preference number: 6 (lower is better) Translates to: GTPGITLLDGDS*LRTEPGFSGTV Trigger: AACCGTTCCAGAAAACCCAGGCTCGGTCCGTAGCCAGCTGTCACCATCCAGTAAGGTTATTCCAGGGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | GGCATGATATGGCACATGGCTTTGCCGAACATCCACTaGTCCAACAAGACAGAGGTCAGGGTGAAAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GMIWHMALPNIH*SNKTEVRVKGE Trigger: CTCCCCTTTCACCCTGACCTCTGTCTTGTTGGATCAGTGGATGTTCGGCAAAGCCATGTGCCATATCATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | CGTGAGGGAACGCTTGACTCTCATCTCCTGAGCATCTaGGCTTTCTTCAGGTTTCACCTCAAAGCAGATCGG | + |
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Preference number: 6 (lower is better) Translates to: REGTLDSHLLSI*AFFRFHLKADR Trigger: CCGATCTGCTTTGAGGTGAAACCTGAAGAAAGCTCAGATGCTCAGGAGATGAGAGTCAAGCGTTCCCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS GCA 72 bp | AGAGCCCAATCAGGAAGTATTGTAAGTCGTCTACGCTaGCTCTATAGTCCTCCCAGACTGGAAAGGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RAQSGSIVSRLR*LYSPPRLERQC Trigger: ACACTGCCTTTCCAGTCTGGGAGGACTATAGAGGCAGCGTAGACGACTTACAATACTTCCTGATTGGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CCA 72 bp | TTGGAAATCAGGTTATCATTGAAATCGGTCACCACGTaGAAGACGTGGAGTGGCATCCAGCTAACAGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: LEIRLSLKSVTT*KTWSGIQLTAN Trigger: GTTCGCTGTTAGCTGGATGCCACTCCACGTCTTCCACGTGGTGACCGATTTCAATGATAACCTGATTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CCA 72 bp | AGGTTATCATTGAAATCGGTCACCACGTGGAAGACGTaGAGTGGCATCCAGCTAACAGCGAACACTAATATC | + |
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Preference number: 6 (lower is better) Translates to: RLSLKSVTTWKT*SGIQLTANTNI Trigger: GATATTAGTGTTCGCTGTTAGCTGGATGCCACTCCACGTCTTCCACGTGGTGACCGATTTCAATGATAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CAA 90 bp | GCAATTCTGTATGAATCAGAGGGCCATGACTCAACACACAAATACTaGCTGCTTAGCAATGCTGAGCCAAAGGTTTCCTTAAGTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: AILYESEGHDSTHKY*LLSNAEPKVSLSST Trigger: TGTGGAACTTAAGGAAACCTTTGGCTCAGCATTGCTAAGCAGCAAGTATTTGTGTGTTGAGTCATGGCCCTCTGATTCATACAGAATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | ATCGGATTAAGACAACAGGACATCATGCCTAACAAGTaGCAGATGCAGTACACCAGCTTGAAATGCCTATTG | + |
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Preference number: 6 (lower is better) Translates to: IGLRQQDIMPNK*QMQYTSLKCLL Trigger: CAATAGGCATTTCAAGCTGGTGTACTGCATCTGTCACTTGTTAGGCATGATGTCCTGTTGTCTTAATCCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS CAA 72 bp | TATGAATCAGAGGGCCATGACTCAACACACAAATACTaGCTGCTTAGCAATGCTGAGCCAAAGGTTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: YESEGHDSTHKY*LLSNAEPKVSL Trigger: TAAGGAAACCTTTGGCTCAGCATTGCTAAGCAGCAAGTATTTGTGTGTTGAGTCATGGCCCTCTGATTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | ATTAAAATCAGAGTTGAAACCAGAACTGATACACACTaGAGGAATGGCATGATATGGCACATGGCTTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IKIRVETRTDTH*RNGMIWHMALP Trigger: CGGCAAAGCCATGTGCCATATCATGCCATTCCTTCAGTGTGTATCAGTTCTGGTTTCAACTCTGATTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | GACAATCCACAGCTTATACTCCTGCAGACACTAGTATaGCTTACTGTTAAACATACTAGAGGCAGGATATAC | + |
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Preference number: 6 (lower is better) Translates to: DNPQLILLQTLV*LTVKHTRGRIY Trigger: GTATATCCTGCCTCTAGTATGTTTAACAGTAAGTCATACTAGTGTCTGCAGGAGTATAAGCTGTGGATTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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| CDS TCA 72 bp | GAGGCAGGATATACTGAACTAACAATAAAGAGATTGTaGAAGCAATTCTGTATGAATCAGAGGGCCATGACT | + |
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Preference number: 6 (lower is better) Translates to: EAGYTELTIKRL*KQFCMNQRAMT Trigger: AGTCATGGCCCTCTGATTCATACAGAATTGCTTTCACAATCTCTTTATTGTTAGTTCAGTATATCCTGCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070810.8 ENSMUST00000211920.2 ENSMUST00000212563.2 |
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