Pregenerated sensors for NPY2R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028004Ensembl transcript IDs: ENSMUST00000029633.5, ENSMUST00000098997.5, ENSMUST00000182181.8, ENSMUST00000182831.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGGTTCCAAAAGGCTTTAGCAGTTAGCAAGAAACAGAAGAGCTaGGTTGCTCGCTTGTCATCCAAACAGTATCTACCTAAAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VWFQKALAVSKKQKS*VARLSSKQYLPKAG Trigger: TCCTGCTTTAGGTAGATACTGTTTGGATGACAAGCGAGCAACTCAGCTCTTCTGTTTCTTGCTAACTGCTAAAGCCTTTTGGAACCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 |
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| 3UTR CCA 90 bp | AATTCAACCTACAATCCAAGCATCGGTAATCAGAACGTTGTGCCATaGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: NSTYNPSIGNQNVVP*QSVYFYLLLPASFP Trigger: TGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCTTGGATTGTAGGTTGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCATACAATGGGAGGTCTaGATGCACTGGCCAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NQNVVPWQSVYFYLLLPAIQWEV*MHWPEN Trigger: GTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTAT...GGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCGGTTCTGTTGCTTTTTaGGTCAATACAATGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFGSVAF*VNTMGG Trigger: ACCTCCCATTGTATTGACTCAAAAAGCAACAGAACC...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCATACAATGGGAGGTCTaGATGCACTGGCCAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCIQWEV*MHWPEN Trigger: GTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTAT...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTATACAATGGGAGGTCTaGATGCACTGGCCAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SIGNQNVVPWQSVYFYLLIQWEV*MHWPEN Trigger: GTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTAT...AAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCATTTTTACCTCCTTCTaGCAGCCAGTTTTCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFIFTSF*QPVFQK Trigger: TTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAAT...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTTTTGAGTCAATACAATaGGAGGTCTGCATGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGFESIQ*EVCMHW Trigger: CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAA...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCCAGAACGTTGTGCCATaGCAATCTGTTTATTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFQNVVP*QSVYFY Trigger: GTAAAAATAAACAGATTGCCATGGCACAACGTTCTG...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTGGTTCTGTTGCTTTTTaGGTCAATACAATGGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGGSVAF*VNTMGG Trigger: ACCTCCCATTGTATTGACTCAAAAAGCAACAGAACC...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCTTCTTCAGATGACTGTGCAGAGTCCAACAGGAAAGACTGTCTTTTATTTTGAGTCAATACAATaGGAGGTCTGCATGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: KKLLQMTVQSPTGKTVFYFESIQ*EVCMHW Trigger: CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAA...ATAAAAGACAGTCTTTCCTGTTGGACTCTGCACAGTCATCTGAAGAAGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCGGTTCTGTTGCTTTTTaGGTCAATACAATGGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSFPSLLIIQPTIQASVIGSVAF*VNTMGG Trigger: ACCTCCCATTGTATTGACTCAAAAAGCAACAGAACC...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTGGGCTTCGGTTCTGTTaGTTTTTGAGTCAATACAAT | + |
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Preference number: 2 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGGLRFC*FLSQYN Trigger: ATTGTATTGACTCAAAAAGCAACAGAACCGAAGCCC...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTATTTTTACCTCCTTCTaGCAGCCAGTTTTCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGIFTSF*QPVFQK Trigger: TTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAAT...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGCTTCTTCAGATGACTGTGCAGAGTCCAACAGGAAAGACTGTCTTTTATGGGCTTCGGTTCTGTTaGTTTTTGAGTCAATACAAT | + |
|
Preference number: 2 (lower is better) Translates to: KKLLQMTVQSPTGKTVFYGLRFC*FLSQYN Trigger: ATTGTATTGACTCAAAAAGCAACAGAACCGAAGCCC...ATAAAAGACAGTCTTTCCTGTTGGACTCTGCACAGTCATCTGAAGAAGCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGGGGGCTTCGGTTCTGTaGCTTTTTGAGTCAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: SERCAMAICLFLPPSASQGASVL*LFESIQ Trigger: TTGTATTGACTCAAAAAGCAACAGAACCGAAGCCCC...CTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR CCA 72 bp | TACAATCCAAGCATCGGTAATCAGAACGTTGTGCCATaGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: YNPSIGNQNVVP*QSVYFYLLLPA Trigger: GGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCTTGGATTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR TCA 72 bp | CAAAAGGCTTTAGCAGTTAGCAAGAAACAGAAGAGCTaGGTTGCTCGCTTGTCATCCAAACAGTATCTACCT | + |
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Preference number: 3 (lower is better) Translates to: QKALAVSKKQKS*VARLSSKQYLP Trigger: AGGTAGATACTGTTTGGATGACAAGCGAGCAACTCAGCTCTTCTGTTTCTTGCTAACTGCTAAAGCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 |
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| 3UTR GCA 72 bp | CAACCTACAATCCAAGCATCGGTAATCAGAACGTTGTaGCATGGCAATCTGTTTATTTTTACCTCCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QPTIQASVIRTL*HGNLFIFTSFC Trigger: GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCTTGGATTGTAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAAGGGGCTTCGGTTCTGTaGCTTTTTGAGTCAATACAA | + |
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Preference number: 3 (lower is better) Translates to: MAICLFLPPSASQFSRNKGASVL*LFESIQ Trigger: TTGTATTGACTCAAAAAGCAACAGAACCGAAGCCCC...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGTTGCCAGCAGAGCGCTaGTGCCCCAGGCCAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWLPAER*CPRPGQ Trigger: TTGGCCTGGCCTGGGGCATCAGCGCTCTGCTGGCAA...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACTTGCCAGCAGAGCGCTaGTGCCCCAGGCCAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LSQYNGRSACTGQKTFPNLPAER*CPRPGQ Trigger: TTGGCCTGGCCTGGGGCATCAGCGCTCTGCTGGCAA...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | AATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGCGGAGGGGTAGCCAGCTaGCTGCAAACACCACTACCA | + |
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Preference number: 4 (lower is better) Translates to: NGRSACTGQKTFPNQIGSGGVAS*LQTPLP Trigger: TGGTAGTGGTGTTTGCAGTCAGCTGGCTACCCCTCC...GCTGCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCCCGGAAGATGGCCAGTaGACTTGCCAGCAGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: YNGRSACTGQKTFPNQIGPEDGQ*TCQQSA Trigger: AGCGCTCTGCTGGCAAGTCCACTGGCCATCTTCCGG...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCTTGCCAGCAGAGCGCTaGTGCCCCAGGCCAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: CFLSQYNGRSACTGQKTFLPAER*CPRPGQ Trigger: TTGGCCTGGCCTGGGGCATCAGCGCTCTGCTGGCAA...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | AGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGGCGAGTTGGAAGGCGTaGAGGGGTAGCCAGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: SQYNGRSACTGQKTFPNQASWKA*RGSQLT Trigger: AGTCAGCTGGCTACCCCTCCACGCCTTCCAACTCGC...CTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCTTGCAGCTCCAGGACTaGCGTGGTTCCTCAGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: YNGRSACTGQKTFPNQIGLQLQD*RGSSAY Trigger: GTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAA...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR GCA 90 bp | GTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGAATGGCATCCAACCTCTaGTCACAGCGGAAGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VNTMGGLHALARKPSLTRMASNL*SQRKAE Trigger: CTCGGCCTTCCGCTGTGAGCAGAGGTTGGATGCCAT...TCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCGGAAGATGGCCAGTaGACTTGCCAGCAGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWPEDGQ*TCQQSA Trigger: AGCGCTCTGCTGGCAAGTCCACTGGCCATCTTCCGG...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCGCTCCAGGACTGACGTaGTTCCTCAGCTTACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YNGRSACTGQKTFPNQIGAPGLT*FLSLLQ Trigger: CTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGC...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | AGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGTTCAGGTCCAGGACGTaGCTGTCGATGTCCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: SQYNGRSACTGQKTFPNQFRSRT*LSMSTA Trigger: CGCTGTGGACATCGACAGCCACGTCCTGGACCTGAA...CTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | GTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGCAGCTCCAGGACTaGCGTGGTTCCTCAGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: VNTMGGLHALARKPSLTRLQLQD*RGSSAY Trigger: GTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAA...TCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGGGAGGGGTAGCCAGCTaGCTGCAAACACCACTACCA | + |
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Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWGGVAS*LQTPLP Trigger: TGGTAGTGGTGTTTGCAGTCAGCTGGCTACCCCTCC...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR GCA 90 bp | AATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGCATGGTAATGGTCACTTaGAGCTCCAGGACTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: NGRSACTGQKTFPNQIGSMVMVT*SSRTDV Trigger: CACGTCAGTCCTGGAGCTGCAAGTGACCATTACCAT...GCTGCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGTATTCCCGGAAGATaGCCAGTGGACTTGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YNGRSACTGQKTFPNQIGSIPGR*PVDLPA Trigger: TGCTGGCAAGTCCACTGGCCATCTTCCGGGAATACT...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGGCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCGCTCCAGGACTGACGTaGTTCCTCAGCTTACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TAGASVLLLFESIQWEVCAPGLT*FLSLLQ Trigger: CTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGC...GCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGCCCCAGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCGCGAGTTGGAAGGCGTaGAGGGGTAGCCAGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: CFLSQYNGRSACTGQKTFASWKA*RGSQLT Trigger: AGTCAGCTGGCTACCCCTCCACGCCTTCCAACTCGC...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACTTCAGGTCCAGGACGTaGCTGTCGATGTCCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSQYNGRSACTGQKTFPNFRSRT*LSMSTA Trigger: CGCTGTGGACATCGACAGCCACGTCCTGGACCTGAA...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGTTCAGGTCCAGGACGTaGCTGTCGATGTCCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWFRSRT*LSMSTA Trigger: CGCTGTGGACATCGACAGCCACGTCCTGGACCTGAA...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | AGCATCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTTTGCCAGCAGAGCGCTaGTGCCCCAGGCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIGNQNVVPWQSVYFYLLLPAER*CPRPGQ Trigger: TTGGCCTGGCCTGGGGCATCAGCGCTCTGCTGGCAA...AAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGTTGCAGCTCCAGGACTaGCGTGGTTCCTCAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWLQLQD*RGSSAY Trigger: GTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAA...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | GTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGAAGTTTGATTCTCATCTaGCTCTGCACCTACCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNTMGGLHALARKPSLTRSLILI*LCTYRA Trigger: GGCCCGGTAGGTGCAGAGGCAGATGAGAATCAAACT...TCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCATGGTAATGGTCACTTaGAGCTCCAGGACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNGRSACTGQKTFPNQIGMVMVT*SSRTDV Trigger: CACGTCAGTCCTGGAGCTGCAAGTGACCATTACCAT...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGATGGCATCCAACCTCTaGTCACAGCGGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SERCAMAICLFLPPSASQMASNL*SQRKAE Trigger: CTCGGCCTTCCGCTGTGAGCAGAGGTTGGATGCCAT...CTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGGCTCCAGGACTGACGTaGTTCCTCAGCTTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWAPGLT*FLSLLQ Trigger: CTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGC...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | AATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGCTGTAGGAGAAAGATATaGTGCCCAGAGGCAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: NGRSACTGQKTFPNQIGSCRRKI*CPEAKR Trigger: ACGTTTTGCCTCTGGGCATCATATCTTTCTCCTACA...GCTGCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCTTCGCTTGGAGATCTTaGTCTCCAGGTGGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: YNGRSACTGQKTFPNQIGFAWRS*SPGGRQ Trigger: TTGTCTACCACCTGGAGAGCAAGATCTCCAAGCGAA...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAATGGCATCCAACCTCTaGTCACAGCGGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCCFLSQYNGRSACTGQKMASNL*SQRKAE Trigger: CTCGGCCTTCCGCTGTGAGCAGAGGTTGGATGCCAT...TTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCGCTCCAGGACTGACGTaGTTCCTCAGCTTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLSQYNGRSACTGQKTFAPGLT*FLSLLQ Trigger: CTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGC...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCGCGAGTTGGAAGGCGTaGAGGGGTAGCCAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCASWKA*RGSQLT Trigger: AGTCAGCTGGCTACCCCTCCACGCCTTCCAACTCGC...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCTACCCCTAGCAAGATaGTGGAGCAGTAGGCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LSQYNGRSACTGQKTFPNLPLAR*WSSRPI Trigger: TATTGGCCTACTGCTCCATCATCTTGCTAGGGGTAG...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCTACCCCTAGCAAGATaGTGGAGCAGTAGGCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: ASVLLLFESIQWEVCMHWLPLAR*WSSRPI Trigger: TATTGGCCTACTGCTCCATCATCTTGCTAGGGGTAG...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCATAGACACCTCCGAGTaGATGGCATCCAACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLSQYNGRSACTGQKTFIDTSE*MASNLC Trigger: GCAGAGGTTGGATGCCATTCACTCGGAGGTGTCTAT...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCATAGACACCTCCGAGTaGATGGCATCCAACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFIDTSE*MASNLC Trigger: GCAGAGGTTGGATGCCATTCACTCGGAGGTGTCTAT...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACATGGTAATGGTCACTTaGAGCTCCAGGACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQYNGRSACTGQKTFPNMVMVT*SSRTDV Trigger: CACGTCAGTCCTGGAGCTGCAAGTGACCATTACCAT...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCATGGCATCCAACCTCTaGTCACAGCGGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCMASNL*SQRKAE Trigger: CTCGGCCTTCCGCTGTGAGCAGAGGTTGGATGCCAT...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCTCTACAGTATTCCCGGAAGATaGCCAGTGGACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFNHAGANSLFCFPSLLYSIPGR*PVDLPA Trigger: TGCTGGCAAGTCCACTGGCCATCTTCCGGGAATACT...GTAGAGAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCATAGAGAAGGGGGTTaGCAAAGGTGGAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLSQYNGRSACTGQKTFHREGG*QRWSTW Trigger: CCATGTGCTCCACCTTTGCCAACCCCCTTCTCTATG...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGCATAGAGAAGGGGGTTaGCAAAGGTGGAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SERCAMAICLFLPPSASQHREGG*QRWSTW Trigger: CCATGTGCTCCACCTTTGCCAACCCCCTTCTCTATG...CTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCGGCGGTCCAGAGCAATaGCTGTCAAAGTTATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLSQYNGRSACTGQKTFGGPEQ*LSKLLW Trigger: CCACAATAACTTTGACAGTCATTGCTCTGGACCGCC...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | AGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGTGTAGGAGAAAGATATaGTGCCCAGAGGCAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SQYNGRSACTGQKTFPNQCRRKI*CPEAKR Trigger: ACGTTTTGCCTCTGGGCATCATATCTTTCTCCTACA...CTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | AGCATCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTGGAGGGGTAGCCAGCTaGCTGCAAACACCACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SIGNQNVVPWQSVYFYLLGGVAS*LQTPLP Trigger: TGGTAGTGGTGTTTGCAGTCAGCTGGCTACCCCTCC...AAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR GCA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCATGGTAATGGTCACTTaGAGCTCCAGGACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFMVMVT*SSRTDV Trigger: CACGTCAGTCCTGGAGCTGCAAGTGACCATTACCAT...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGGCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCCACATGGCGATAATGTaGAACACGGTGAAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAGASVLLLFESIQWEVCHMAIM*NTVKMS Trigger: ACTCATCTTCACCGTGTTCCACATTATCGCCATGTG...GCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGCCCCAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACTGTAGGAGAAAGATATaGTGCCCAGAGGCAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQYNGRSACTGQKTFPNCRRKI*CPEAKR Trigger: ACGTTTTGCCTCTGGGCATCATATCTTTCTCCTACA...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCGGAGGGGTAGCCAGCTaGCTGCAAACACCACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFPSLLIIQPTIQASVIGGVAS*LQTPLP Trigger: TGGTAGTGGTGTTTGCAGTCAGCTGGCTACCCCTCC...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCTCTACTTCGCTTGGAGATCTTaGTCTCCAGGTGGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PFNHAGANSLFCFPSLLYFAWRS*SPGGRQ Trigger: TTGTCTACCACCTGGAGAGCAAGATCTCCAAGCGAA...GTAGAGAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCATAGGTAAGAGTGAATaGCAGGCACAGGGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFIGKSE*QAQGVH Trigger: GTGAACACCCTGTGCCTGCCATTCACTCTTACCTAT...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCAGTATTCCCGGAAGATaGCCAGTGGACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCSIPGR*PVDLPA Trigger: TGCTGGCAAGTCCACTGGCCATCTTCCGGGAATACT...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCATAGAGAAGGGGGTTaGCAAAGGTGGAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCHREGG*QRWSTW Trigger: CCATGTGCTCCACCTTTGCCAACCCCCTTCTCTATG...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCACACCTCCGAGTGAATaGCATCCAACCTCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCTPPSE*HPTSAH Trigger: GTGAGCAGAGGTTGGATGCCATTCACTCGGAGGTGT...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCTTGCAGCTCCAGGACTaGCGTGGTTCCTCAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPSLLIIQPTIQASVILQLQD*RGSSAY Trigger: GTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAA...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTATAGACACCTCCGAGTaGATGGCATCCAACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGIDTSE*MASNLC Trigger: GCAGAGGTTGGATGCCATTCACTCGGAGGTGTCTAT...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAGTTTGATTCTCATCTaGCTCTGCACCTACCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGSLILI*LCTYRA Trigger: GGCCCGGTAGGTGCAGAGGCAGATGAGAATCAAACT...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAATAGGTAAGAGTGAATaGCAGGCACAGGGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FCCFLSQYNGRSACTGQKIGKSE*QAQGVH Trigger: GTGAACACCCTGTGCCTGCCATTCACTCTTACCTAT...TTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCCGCACACCAGCATTTTaGTCATTTTGTGCCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NQNVVPWQSVYFYLLLPARTPAF*SFCAFA Trigger: AGCGAAGGCACAAAATGACCAAAATGCTGGTGTGCG...GGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAACGCACACCAGCATTTTaGTCATTTTGTGCCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FCCFLSQYNGRSACTGQKRTPAF*SFCAFA Trigger: AGCGAAGGCACAAAATGACCAAAATGCTGGTGTGCG...TTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAATTCAGGTCCAGGACGTaGCTGTCGATGTCCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKFRSRT*LSMSTA Trigger: CGCTGTGGACATCGACAGCCACGTCCTGGACCTGAA...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGCACATGGCGATAATGTaGAACACGGTGAAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SERCAMAICLFLPPSASQHMAIM*NTVKMS Trigger: ACTCATCTTCACCGTGTTCCACATTATCGCCATGTG...CTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTACACCTCCGAGTGAATaGCATCCAACCTCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGTPPSE*HPTSAH Trigger: GTGAGCAGAGGTTGGATGCCATTCACTCGGAGGTGT...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTGGCGGTCCAGAGCAATaGCTGTCAAAGTTATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGGGPEQ*LSKLLW Trigger: CCACAATAACTTTGACAGTCATTGCTCTGGACCGCC...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | AGCATCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTGGCGGTCCAGAGCAATaGCTGTCAAAGTTATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIGNQNVVPWQSVYFYLLGGPEQ*LSKLLW Trigger: CCACAATAACTTTGACAGTCATTGCTCTGGACCGCC...AAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCATAGACACCTCCGAGTaGATGGCATCCAACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPSLLIIQPTIQASVIIDTSE*MASNLC Trigger: GCAGAGGTTGGATGCCATTCACTCGGAGGTGTCTAT...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCATAGGTAAGAGTGAATaGCAGGCACAGGGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVIRTLCHGNLFIFTSFCIGKSE*QAQGVH Trigger: GTGAACACCCTGTGCCTGCCATTCACTCTTACCTAT...GCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCCATAGAGAAGGGGGTTaGCAAAGGTGGAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFPSLLIIQPTIQASVIHREGG*QRWSTW Trigger: CCATGTGCTCCACCTTTGCCAACCCCCTTCTCTATG...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR GCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAAAGTTTGATTCTCATCTaGCTCTGCACCTACCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKSLILI*LCTYRA Trigger: GGCCCGGTAGGTGCAGAGGCAGATGAGAATCAAACT...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAAAGTATTCCCGGAAGATaGCCAGTGGACTTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKSIPGR*PVDLPA Trigger: TGCTGGCAAGTCCACTGGCCATCTTCCGGGAATACT...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAAACACCTCCGAGTGAATaGCATCCAACCTCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKTPPSE*HPTSAH Trigger: GTGAGCAGAGGTTGGATGCCATTCACTCGGAGGTGT...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCCGCACACCAGCATTTTaGTCATTTTGTGCCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFPSLLIIQPTIQASVIRTPAF*SFCAFA Trigger: AGCGAAGGCACAAAATGACCAAAATGCTGGTGTGCG...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAACGCACACCAGCATTTTaGTCATTTTGTGCCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKRTPAF*SFCAFA Trigger: AGCGAAGGCACAAAATGACCAAAATGCTGGTGTGCG...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR TCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAATGTAGGAGAAAGATATaGTGCCCAGAGGCAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKCRRKI*CPEAKR Trigger: ACGTTTTGCCTCTGGGCATCATATCTTTCTCCTACA...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CCA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAACACATGGCGATAATGTaGAACACGGTGAAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MAICLFLPPSASQFSRNKHMAIM*NTVKMS Trigger: ACTCATCTTCACCGTGTTCCACATTATCGCCATGTG...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| 3UTR CAA 72 bp | ATTCAACCTACAATCCAAGCATCGGTAATCAGAACGTaGTGCCATGGCAATCTGTTTATTTTTACCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQPTIQASVIRT*CHGNLFIFTSF Trigger: GAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCTTGGATTGTAGGTTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 90 bp | TACTCCTTCAGGTCCAGGACGTGGCTGTCGATGTCCACAGCGAGTTaGAAGGCGTGGAGGGGTAGCCAGCTGACTGCAAACACCACTACC | + |
|
Preference number: 5 (lower is better) Translates to: YSFRSRTWLSMSTAS*KAWRGSQLTANTTT Trigger: GGTAGTGGTGTTTGCAGTCAGCTGGCTACCCCTCCACGCCTTCCAACTCGCTGTGGACATCGACAGCCACGTCCTGGACCTGAAGGAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 90 bp | TGGAACACGGTGAAGATGAGTTTGTACTCCTTCAGGTCCAGGACGTaGCTGTCGATGTCCACAGCGAGTTGGAAGGCGTGGAGGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: WNTVKMSLYSFRSRT*LSMSTASWKAWRGS Trigger: GCTACCCCTCCACGCCTTCCAACTCGCTGTGGACATCGACAGCCACGTCCTGGACCTGAAGGAGTACAAACTCATCTTCACCGTGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS GCA 90 bp | AATGATCTCAATCAGGGAGTATTCCCGGAAGATGGCCAGTGGACTTaGCAGCAGAGCGCTGATGCCCCAGGCCAGGCCAATGATCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NDLNQGVFPEDGQWT*QQSADAPGQANDQE Trigger: TTCCTGATCATTGGCCTGGCCTGGGGCATCAGCGCTCTGCTGGCAAGTCCACTGGCCATCTTCCGGGAATACTCCCTGATTGAGATCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 90 bp | CGGCTCCGGATCAGGGGGCAACTCACCTCTAGGAGTAGTGTGCCCTaGCCCATAGGGCTCCACTTTCACTTCTACAGTTTGATTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RLRIRGQLTSRSSVP*PIGLHFHFYSLILI Trigger: GATGAGAATCAAACTGTAGAAGTGAAAGTGGAGCCCTATGGGCCAGGGCACACTACTCCTAGAGGTGAGTTGCCCCCTGATCCGGAGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS TCA 90 bp | TGTCGATGTCCACAGCGAGTTGGAAGGCGTGGAGGGGTAGCCAGCTaGCTGCAAACACCACTACCACGCACACCAGCATTTTGGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CRCPQRVGRRGGVAS*LQTPLPRTPAFWSF Trigger: AAATGACCAAAATGCTGGTGTGCGTGGTAGTGGTGTTTGCAGTCAGCTGGCTACCCCTCCACGCCTTCCAACTCGCTGTGGACATCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS TCA 90 bp | TGCTCTCCAGGTGGTAGACAATGCAACGATGGCGGTCCAGAGCAATaGCTGTCAAAGTTATTGTGGACACTTGTACCGCCAGACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSPGGRQCNDGGPEQ*LSKLLWTLVPPDPG Trigger: CCCAGGGTCTGGCGGTACAAGTGTCCACAATAACTTTGACAGTCATTGCTCTGGACCGCCATCGTTGCATTGTCTACCACCTGGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS TCA 90 bp | CCCCAGGCCACTTCTCGGTACAGGCCACAATCTCAAAGTCAGGAATaGTCTCAATCAGGGAGTATTCCCGGAAGATGGCCAGTGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQATSRYRPQSQSQE*SQSGSIPGRWPVDL Trigger: CAAGTCCACTGGCCATCTTCCGGGAATACTCCCTGATTGAGATCATTCCTGACTTTGAGATTGTGGCCTGTACCGAGAAGTGGCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS GCA 90 bp | ACCTCTGCTCACAGCGGAAGGCCGAGAGGAAAGCTTTTCTGTAGTTaGTATTCATCCAACCATAGAGAAGGGGGTTGGCAAAGGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSAHSGRPRGKLFCS*YSSNHREGGWQRWS Trigger: GCTCCACCTTTGCCAACCCCCTTCTCTATGGTTGGATGAATAGCAACTACAGAAAAGCTTTCCTCTCGGCCTTCCGCTGTGAGCAGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 90 bp | CGGACCCATTTTCCACTCTCCCATCAAGGTATAGGTAAGAGTGAATaGCAGGCACAGGGTGTTCACCAAAAGATCCGCCACAGCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTHFPLSHQGIGKSE*QAQGVHQKIRHSQV Trigger: AACCTGGCTGTGGCGGATCTTTTGGTGAACACCCTGTGCCTGCCATTCACTCTTACCTATACCTTGATGGGAGAGTGGAAAATGGGTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGGAAGCTGATTCGCTaGGAGATCTTGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YNGRSACTGQKTFPNQIGRKLIR*EILLSR Trigger: CCTGGAGAGCAAGATCTCCAAGCGAATCAGCTTCCT...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGCACGGTGAAGATGAGTTaGTACTCCTTCAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGRSACTGQKTFPNQIGSTVKMS*YSFRSR Trigger: CCTGGACCTGAAGGAGTACAAACTCATCTTCACCGT...GCTGCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS TCA 90 bp | TTTTGTGCCTTCGCTGATGGTAATGGTCACTTGCAGCTCCAGGACTaGCGTGGTTCCTCAGCTTACTCCAGATACGGGTGTAGGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FCAFADGNGHLQLQD*RGSSAYSRYGCRRK Trigger: CTTTCTCCTACACCCGTATCTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAAGTGACCATTACCATCAGCGAAGGCACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS TCA 90 bp | ACTTCCAGGTTCTTTTTAGCCTTGAAGGTCATAGACACCTCCGAGTaGATGGCATCCAACCTCTGCTCACAGCGGAAGGCCGAGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSRFFLALKVIDTSE*MASNLCSQRKAERK Trigger: TTTCCTCTCGGCCTTCCGCTGTGAGCAGAGGTTGGATGCCATTCACTCGGAGGTGTCTATGACCTTCAAGGCTAAAAAGAACCTGGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTGGGGCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCTGGATTACCAGGGAGTaGCCAACTACCCCTAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAGASVLLLFESIQWEVCWITRE*PTTPSK Trigger: CTTGCTAGGGGTAGTTGGCAACTCCCTGGTAATCCA...GCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGCCCCAGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | AGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGTGGATTACCAGGGAGTaGCCAACTACCCCTAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQYNGRSACTGQKTFPNQWITRE*PTTPSK Trigger: CTTGCTAGGGGTAGTTGGCAACTCCCTGGTAATCCA...CTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS GCA 90 bp | CAGCATTTTGGTCATTTTGTGCCTTCGCTGATGGTAATGGTCACTTaGAGCTCCAGGACTGACGTGGTTCCTCAGCTTACTCCAGATACG | + |
|
Preference number: 5 (lower is better) Translates to: QHFGHFVPSLMVMVT*SSRTDVVPQLTPDT Trigger: CGTATCTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAAGTGACCATTACCATCAGCGAAGGCACAAAATGACCAAAATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCAGCAGGTTCTTTTTAGCCTaGAAGGTCATAGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NGRSACTGQKTFPNQIGSRFFLA*KVIDTS Trigger: GGAGGTGTCTATGACCTTCAAGGCTAAAAAGAACCT...GCTGCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGATTGGCACTGTGCGCATGCTCTaGAATTTGATTACCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: YNGRSACTGQKTFPNQIGTVRML*NLITTW Trigger: CCATGTGGTAATCAAATTCAAGAGCATGCGCACAGT...GCCAATCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | CCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCTCTACACGGTGAAGATGAGTTaGTACTCCTTCAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFNHAGANSLFCFPSLLYTVKMS*YSFRSR Trigger: CCTGGACCTGAAGGAGTACAAACTCATCTTCACCGT...GTAGAGAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGACGGTGAAGATGAGTTaGTACTCCTTCAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SERCAMAICLFLPPSASQTVKMS*YSFRSR Trigger: CCTGGACCTGAAGGAGTACAAACTCATCTTCACCGT...CTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCACGGTGAAGATGAGTTaGTACTCCTTCAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFLSQYNGRSACTGQKTFTVKMS*YSFRSR Trigger: CCTGGACCTGAAGGAGTACAAACTCATCTTCACCGT...GAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | GTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACCAGAAGGTTCTTTTTAGCCTaGAAGGTCATAGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VNTMGGLHALARKPSLTRRFFLA*KVIDTS Trigger: GGAGGTGTCTATGACCTTCAAGGCTAAAAAGAACCT...TCTGGTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACAGGTTCTTTTTAGCCTaGAAGGTCATAGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQYNGRSACTGQKTFPNRFFLA*KVIDTS Trigger: GGAGGTGTCTATGACCTTCAAGGCTAAAAAGAACCT...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGTTTCACTTCTACAGTTaGATTCTCATCTGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASVLLLFESIQWEVCMHWFHFYS*ILICLC Trigger: GCAGAGGCAGATGAGAATCAAACTGTAGAAGTGAAA...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 90 bp | AAAAAGTTGGTTACTGTGCGCATGCTCTTGAATTTGATTACCACATaGATTACCAGGGAGTTGCCAACTACCCCTAGCAAGATGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKLVTVRMLLNLITT*ITRELPTTPSKMME Trigger: CTCCATCATCTTGCTAGGGGTAGTTGGCAACTCCCTGGTAATCCATGTGGTAATCAAATTCAAGAGCATGCGCACAGTAACCAACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCTTTCACTTCTACAGTTaGATTCTCATCTGCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FSLLTMLVPTPCSVFLPFFHFYS*ILICLC Trigger: GCAGAGGCAGATGAGAATCAAACTGTAGAAGTGAAA...GAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | CCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCTCTACCGCATGCTCTTGAATTaGATTACCACATGGATTACC | + |
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Preference number: 5 (lower is better) Translates to: PFNHAGANSLFCFPSLLYRMLLN*ITTWIT Trigger: GGTAATCCATGTGGTAATCAAATTCAAGAGCATGCG...GTAGAGAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGCGCATGCTCTTGAATTaGATTACCACATGGATTACC | + |
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Preference number: 5 (lower is better) Translates to: SERCAMAICLFLPPSASQRMLLN*ITTWIT Trigger: GGTAATCCATGTGGTAATCAAATTCAAGAGCATGCG...CTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCAGGAAGCTGATTCGCTaGGAGATCTTGCTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FSFPSLLIIQPTIQASVIRKLIR*EILLSR Trigger: CCTGGAGAGCAAGATCTCCAAGCGAATCAGCTTCCT...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCTTCTTCAGATGACTGTGCAGAGTCCAACAGGAAAGACTGTCTTTTATAGGAAGCTGATTCGCTaGGAGATCTTGCTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KKLLQMTVQSPTGKTVFYRKLIR*EILLSR Trigger: CCTGGAGAGCAAGATCTCCAAGCGAATCAGCTTCCT...ATAAAAGACAGTCTTTCCTGTTGGACTCTGCACAGTCATCTGAAGAAGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 |
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| CDS-3UTR CAA 90 bp | TTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAAGGTTCTTTTTAGCCTaGAAGGTCATAGACACCTCC | + |
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Preference number: 5 (lower is better) Translates to: FCCFLSQYNGRSACTGQKRFFLA*KVIDTS Trigger: GGAGGTGTCTATGACCTTCAAGGCTAAAAAGAACCT...TTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAACCTTCCCTAACGGGCCATTGTTCTTTTaGACTTCCAGGTTCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: LSQYNGRSACTGQKTFPNGPLFF*TSRFFL Trigger: TAAAAAGAACCTGGAAGTCAAAAAGAACAATGGCCC...GTTAGGGAAGGTTTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | GCTTCGGTTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGGGGCCATTGTTCTTTTaGACTTCCAGGTTCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: ASVLLLFESIQWEVCMHWGPLFF*TSRFFL Trigger: TAAAAAGAACCTGGAAGTCAAAAAGAACAATGGCCC...CCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAACCGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | ATGGCAATCTGTTTATTTTTACCTCCTTCTGCCAGCCAGTTTTCCAGAAATAAAAGGAAGCTGATTCGCTaGGAGATCTTGCTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MAICLFLPPSASQFSRNKRKLIR*EILLSR Trigger: CCTGGAGAGCAAGATCTCCAAGCGAATCAGCTTCCT...TTTATTTCTGGAAAACTGGCTGGCAGAAGGAGGTAAAAATAAACAGATTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | CCTTTTAACCATGCTGGTGCCAACTCCTTGTTCTGTTTTCCTTCCCTTCTCTACGGGCCATTGTTCTTTTaGACTTCCAGGTTCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: PFNHAGANSLFCFPSLLYGPLFF*TSRFFL Trigger: TAAAAAGAACCTGGAAGTCAAAAAGAACAATGGCCC...GTAGAGAAGGGAAGGAAAACAGAACAAGGAGTTGGCACCAGCATGGTTAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | AGCATCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTACTGTGCGCATGCTCTaGAATTTGATTACCACATGG | + |
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Preference number: 5 (lower is better) Translates to: SIGNQNVVPWQSVYFYLLTVRML*NLITTW Trigger: CCATGTGGTAATCAAATTCAAGAGCATGCGCACAGT...AAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TCTGTTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTACTGTGCGCATGCTCTaGAATTTGATTACCACATGG | + |
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Preference number: 5 (lower is better) Translates to: SVFLPFSTHNSTYNPSIGTVRML*NLITTW Trigger: CCATGTGGTAATCAAATTCAAGAGCATGCGCACAGT...ACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TTCTGTTGCTTTTTGAGTCAATACAATGGGAGGTCTGCATGCACTGGCCAGAAAGGGCCATTGTTCTTTTaGACTTCCAGGTTCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: FCCFLSQYNGRSACTGQKGPLFF*TSRFFL Trigger: TAAAAAGAACCTGGAAGTCAAAAAGAACAATGGCCC...TTTCTGGCCAGTGCATGCAGACCTCCCATTGTATTGACTCAAAAAGCAACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | AGCATCGGTAATCAGAACGTTGTGCCATGGCAATCTGTTTATTTTTACCTCCTTCGCATGCTCTTGAATTaGATTACCACATGGATTACC | + |
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Preference number: 5 (lower is better) Translates to: SIGNQNVVPWQSVYFYLLRMLLN*ITTWIT Trigger: GGTAATCCATGTGGTAATCAAATTCAAGAGCATGCG...AAGGAGGTAAAAATAAACAGATTGCCATGGCACAACGTTCTGATTACCGATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCTTCCCTTCTCTACTCATAATTCAACCTACAATCCAAGCATCGGTAATCTTTCACTTCTACAGTTaGATTCTCATCTGCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FSFPSLLIIQPTIQASVIFHFYS*ILICLC Trigger: GCAGAGGCAGATGAGAATCAAACTGTAGAAGTGAAA...GATTACCGATGCTTGGATTGTAGGTTGAATTATGAGTAGAGAAGGGAAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 72 bp | AGGTCCAGGACGTGGCTGTCGATGTCCACAGCGAGTTaGAAGGCGTGGAGGGGTAGCCAGCTGACTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RSRTWLSMSTAS*KAWRGSQLTAN Trigger: GTTTGCAGTCAGCTGGCTACCCCTCCACGCCTTCCAACTCGCTGTGGACATCGACAGCCACGTCCTGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 72 bp | GATCTCAATCAGGGAGTATTCCCGGAAGATGGCCAGTaGACTTGCCAGCAGAGCGCTGATGCCCCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLNQGVFPEDGQ*TCQQSADAPGQ Trigger: CTGGCCTGGGGCATCAGCGCTCTGCTGGCAAGTCCACTGGCCATCTTCCGGGAATACTCCCTGATTGAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 72 bp | ATCAGGGGGCAACTCACCTCTAGGAGTAGTGTGCCCTaGCCCATAGGGCTCCACTTTCACTTCTACAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: IRGQLTSRSSVP*PIGLHFHFYSL Trigger: CAAACTGTAGAAGTGAAAGTGGAGCCCTATGGGCCAGGGCACACTACTCCTAGAGGTGAGTTGCCCCCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS CAA 90 bp | ACGATGGCGGTCCAGAGCAATGACTGTCAAAGTTATTGTGGACACTaGTACCGCCAGACCCTGGGCATAGGGCACCAAATGGCACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: TMAVQSNDCQSYCGH*YRQTLGIGHQMAQD Trigger: GTCTTGTGCCATTTGGTGCCCTATGCCCAGGGTCTGGCGGTACAAGTGTCCACAATAACTTTGACAGTCATTGCTCTGGACCGCCATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS CAA 90 bp | AAGGTGGAGCACATGGCGATAATGTGGAACACGGTGAAGATGAGTTaGTACTCCTTCAGGTCCAGGACGTGGCTGTCGATGTCCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: KVEHMAIMWNTVKMS*YSFRSRTWLSMSTA Trigger: CGCTGTGGACATCGACAGCCACGTCCTGGACCTGAAGGAGTACAAACTCATCTTCACCGTGTTCCACATTATCGCCATGTGCTCCACCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS TCA 72 bp | TTCGCTGATGGTAATGGTCACTTGCAGCTCCAGGACTaGCGTGGTTCCTCAGCTTACTCCAGATACGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: FADGNGHLQLQD*RGSSAYSRYGC Trigger: ACACCCGTATCTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAAGTGACCATTACCATCAGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS TCA 72 bp | TTCTTTTTAGCCTTGAAGGTCATAGACACCTCCGAGTaGATGGCATCCAACCTCTGCTCACAGCGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: FFLALKVIDTSE*MASNLCSQRKA Trigger: GGCCTTCCGCTGTGAGCAGAGGTTGGATGCCATTCACTCGGAGGTGTCTATGACCTTCAAGGCTAAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CAA 72 bp | GTCCAGAGCAATGACTGTCAAAGTTATTGTGGACACTaGTACCGCCAGACCCTGGGCATAGGGCACCAAATG | + |
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Preference number: 6 (lower is better) Translates to: VQSNDCQSYCGH*YRQTLGIGHQM Trigger: CATTTGGTGCCCTATGCCCAGGGTCTGGCGGTACAAGTGTCCACAATAACTTTGACAGTCATTGCTCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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| CDS TCA 72 bp | ACTTCTCGGTACAGGCCACAATCTCAAAGTCAGGAATaGTCTCAATCAGGGAGTATTCCCGGAAGATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TSRYRPQSQSQE*SQSGSIPGRWP Trigger: TGGCCATCTTCCGGGAATACTCCCTGATTGAGATCATTCCTGACTTTGAGATTGTGGCCTGTACCGAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182181.8 ENSMUST00000182831.2 |
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| CDS CCA 72 bp | GTTACTGTGCGCATGCTCTTGAATTTGATTACCACATaGATTACCAGGGAGTTGCCAACTACCCCTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VTVRMLLNLITT*ITRELPTTPSK Trigger: CTTGCTAGGGGTAGTTGGCAACTCCCTGGTAATCCATGTGGTAATCAAATTCAAGAGCATGCGCACAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029633.5 ENSMUST00000098997.5 ENSMUST00000182831.2 |
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