Pregenerated sensors for NPY1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036437Ensembl transcript IDs: ENSMUST00000039303.7, ENSMUST00000212588.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTGTGCCAGAAAGCTTGATAGAGCTCAGCACTCTGATGAACAATaGAAAACCTTTCGATTATCAAGTCCTTTGGATGCAATTTACCTA | + |
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Preference number: 1 (lower is better) Translates to: ACARKLDRAQHSDEQ*KTFRLSSPLDAIYL Trigger: TAGGTAAATTGCATCCAAAGGACTTGATAATCGAAAGGTTTTGCATTGTTCATCAGAGTGCTGAGCTCTATCAAGCTTTCTGGCACAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039303.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGTGTGCCACCACGCCCAGCTGCCACTTCATTCTTGTGGGTGGCCTAACGTTTTTCCACAGATATaGCCTGGGACCATATGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KGVCHHAQLPLHSCGWPNVFPQI*PGTICS Trigger: AGAGCATATGGTCCCAGGCCATATCTGTGGAAAAAC...GTTAGGCCACCCACAAGAATGAAGTGGCAGCTGGGCGTGGTGGCACACACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCGCATGCGGCAGGCTGTaGTTGTTTTTCCACAGATAT | + |
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Preference number: 2 (lower is better) Translates to: TDRQTDRQSVCLSPSLSLACGRL*LFFHRY Trigger: ATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGC...GAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCTTTCTGTTTTTCCACAGATATaGCCTGGGACCATATGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QTDRQAVCLSLSFSLSLSVFPQI*PGTICS Trigger: AGAGCATATGGTCCCAGGCCATATCTGTGGAAAAAC...AGAAAGAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAAGGTGGTGACTGCTTTTaGAATGAGCTCATGACATTA | + |
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Preference number: 2 (lower is better) Translates to: LAGNEGSPGSWKSHLILKGGDCF*NELMTL Trigger: TAATGTCATGAGCTCATTTCAAAAGCAGTCACCACC...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGAAAAGGTGTTCTTTACTTATCTTTATCTTAGGCAAGACTCAATTAGGAGGTAGTCCGGGGTCTTaGAAATCTCATCTGATCTTG | + |
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Preference number: 2 (lower is better) Translates to: QLKRCSLLIFILGKTQLGGSPGS*KSHLIL Trigger: CAAGATCAGATGAGATTTCCAAGACCCCGGACTACC...TCCTAATTGAGTCTTGCCTAAGATAAAGATAAGTAAAGAACACCTTTTCAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGAAAAGGTGTTCTTTACTTATCTTTATCTTAGGCAAGACTCAATTAGGACTTCAGACACTCTTTTaGCTCAGGCACATTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: QLKRCSLLIFILGKTQLGLQTLF*LRHILK Trigger: TTTTAAAATGTGCCTGAGTCAAAAGAGTGTCTGAAG...TCCTAATTGAGTCTTGCCTAAGATAAAGATAAGTAAAGAACACCTTTTCAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR CCA 72 bp | AACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTaGGCTTTCCAAGCGCGCCTCATTCCGTTCCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NHQKQSNPTQMS*AFQARLIPFPQ Trigger: CTGGGGGAACGGAATGAGGCGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR TCA 72 bp | CTGTGTAGAAAACGCATCTTACGCGTCTGTGCAGTATaGGTTAGAAATGCTCTGAGTCGCATGCTTGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LCRKRILRVCAV*VRNALSRMLVP Trigger: TGGCACAAGCATGCGACTCAGAGCATTTCTAACTCATACTGCACAGACGCGTAAGATGCGTTTTCTACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039303.7 |
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| 3UTR GCA 72 bp | AGAAAGCTTGATAGAGCTCAGCACTCTGATGAACAATaGAAAACCTTTCGATTATCAAGTCCTTTGGATGCA | + |
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Preference number: 3 (lower is better) Translates to: RKLDRAQHSDEQ*KTFRLSSPLDA Trigger: TGCATCCAAAGGACTTGATAATCGAAAGGTTTTGCATTGTTCATCAGAGTGCTGAGCTCTATCAAGCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039303.7 |
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| 3UTR TCA 72 bp | GAATATCAGGTGGTGACTGCTTTTGAAATGAGCTCATaGCATTACTTCAGAGAAATTCACTCCAACAAACAC | + |
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Preference number: 3 (lower is better) Translates to: EYQVVTAFEMSS*HYFREIHSNKH Trigger: GTGTTTGTTGGAGTGAATTTCTCTGAAGTAATGTCATGAGCTCATTTCAAAAGCAGTCACCACCTGATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR TCA 72 bp | TTCAGTATCTTGAGAATATCAGGTGGTGACTGCTTTTaGAATGAGCTCATGACATTACTTCAGAGAAATTCA | + |
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Preference number: 3 (lower is better) Translates to: FSILRISGGDCF*NELMTLLQRNS Trigger: TGAATTTCTCTGAAGTAATGTCATGAGCTCATTTCAAAAGCAGTCACCACCTGATATTCTCAAGATACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR TCA 72 bp | TTGGAAATCTCATCTGATCTTGAAAATTCAGTATCTTaGGAATATCAGGTGGTGACTGCTTTTGAAATGAGC | + |
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Preference number: 3 (lower is better) Translates to: LEISSDLENSVS*EYQVVTAFEMS Trigger: GCTCATTTCAAAAGCAGTCACCACCTGATATTCTCAAGATACTGAATTTTCAAGATCAGATGAGATTTCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| 3UTR GCA 72 bp | ACAATGCAAAACCTTTCGATTATCAAGTCCTTTGGATaGAATTTACCTATCTGCAGCAAGACTAGTTTACAT | + |
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Preference number: 3 (lower is better) Translates to: TMQNLSIIKSFG*NLPICSKTSLH Trigger: ATGTAAACTAGTCTTGCTGCAGATAGGTAAATTGCATCCAAAGGACTTGATAATCGAAAGGTTTTGCATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039303.7 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTGTGCCACCACGCCCAGCTGCCACTTCATTCTTGTGGGTGGCCTAACTTCGCTTGGTCTCACTaGACCTGTACTTACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KGVCHHAQLPLHSCGWPNFAWSH*TCTYCP Trigger: GGGACAGTAAGTACAGGTCCAGTGAGACCAAGCGAA...GTTAGGCCACCCACAAGAATGAAGTGGCAGCTGGGCGTGGTGGCACACACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTGTGCCACCACGCCCAGCTGCCACTTCATTCTTGTGGGTGGCCTAACGTGGCAATGATCTGGTaGTTCCAGTCGAACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: KGVCHHAQLPLHSCGWPNVAMIW*FQSNTV Trigger: CACTGTGTTCGACTGGAACCACCAGATCATTGCCAC...GTTAGGCCACCCACAAGAATGAAGTGGCAGCTGGGCGTGGTGGCACACACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | GGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGGGTTGATGATTAGCTaGTGCCGTTCCACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: GQPSKAVKPNTDVLGFPSGLMIS*CRSTAM Trigger: CATCGCTGTGGAACGGCATCAGCTAATCATCAACCC...GCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | CAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGCGCTTGAACGCCGCAAGTaGCACATTTTGGAAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QPSKAVKPNTDVLGFPSALERRK*HILEGL Trigger: GAGCCCTTCCAAAATGTGTCACTTGCGGCGTTCAAG...CGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | GGTAAAGAAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGATCATGGCGGTGAGGTaGCAGAGCAGAAACAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GKESMRQAVLVFPQIWPGIMAVR*QSRNSR Trigger: TCTGCTGTTTCTGCTCTGTCACCTCACCGCCATGAT...CCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTTCTTTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | AAAGGTGTGTGCCACCACGCCCAGCTGCCACTTCATTCTTGTGGGTGGCCTAACCGATCAGAATGTTGGTaGCATTTCTCATCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KGVCHHAQLPLHSCGWPNRSECW*HFSSPS Trigger: AGAAGGAGATGAGAAATGTCACCAACATTCTGATCG...GTTAGGCCACCCACAAGAATGAAGTGGCAGCTGGGCGTGGTGGCACACACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | AAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATGGGTTGATGATTAGCTaGTGCCGTTCCACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: KACGRLCLFFHRYGLGPYGLMIS*CRSTAM Trigger: CATCGCTGTGGAACGGCATCAGCTAATCATCAACCC...ATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATGCTCTGAGCAGCGCAAGTGACACATTTTaGAAGGGCTCGTCGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: RLCLFFHRYGLGPYALSSASDTF*KGSSVR Trigger: TCTGACCGACGAGCCCTTCCAAAATGTGTCACTTGC...GCTGCTCAGAGCATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACAGGACATCTAGTCAAAACTGTTGCCAGAGAGCCGTTCCACAGCGATaGGAACCAGCGAGAAAATGG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHRTSSQNCCQRAVPQR*EPARKW Trigger: CCATTTTCTCGCTGGTTCTCATCGCTGTGGAACGGC...TCTCTGGCAACAGTTTTGACTAGATGTCCTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAAATCATGGCGGTGAGGTaGCAGAGCAGAAACAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LAGNEGSPGSWKSHLILKIMAVR*QSRNSR Trigger: TCTGCTGTTTCTGCTCTGTCACCTCACCGCCATGAT...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCCAAAGGGATTCAGTTTaGACATGGTCTCCCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TDRQTDRQSVCLSPSLSLQRDSV*TWSPRR Trigger: TCTTCGGGGAGACCATGTGCAAACTGAATCCCTTTG...GAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | CAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGCGTCCCCGAAGACCCAGTaGTCCATCAGTGTATATACA | + |
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Preference number: 4 (lower is better) Translates to: QPSKAVKPNTDVLGFPSASPKTQ*SISVYT Trigger: TGTATATACACTGATGGACCACTGGGTCTTCGGGGA...CGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCTCCCCGAAGACCCAGTaGTCCATCAGTGTATATACA | + |
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Preference number: 4 (lower is better) Translates to: TDRQTDRQSVCLSPSLSLSPKTQ*SISVYT Trigger: TGTATATACACTGATGGACCACTGGGTCTTCGGGGA...GAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAGTGGCAATGATCTGGTaGTTCCAGTCGAACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: SGQPSKAVKPNTDVLGFPVAMIW*FQSNTV Trigger: CACTGTGTTCGACTGGAACCACCAGATCATTGCCAC...TGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR GCA 90 bp | CAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCTTTCTCAAAGGGATTCAGTTTaGACATGGTCTCCCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QTDRQAVCLSLSFSLSLSQRDSV*TWSPRR Trigger: TCTTCGGGGAGACCATGTGCAAACTGAATCCCTTTG...AGAAAGAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR GCA 90 bp | ATCAGGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCCAGAGAAGAAGCCACTaGAAGGACCCAAATGACAGT | + |
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Preference number: 4 (lower is better) Translates to: IRATIKSSQTQHRCPGLSQRRSH*KDPNDS Trigger: ACTGTCATTTGGGTCCTTGCAGTGGCTTCTTCTCTG...GGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTGTGCCACCACGCCCAGCTGCCACTTCATTCTTGTGGGTGGCCTAACAGTGATTTTCAACCTTaGAGAACAGAGTTGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KGVCHHAQLPLHSCGWPNSDFQP*RTELSS Trigger: TGAACTCAACTCTGTTCTCCAAGGTTGAAAATCACT...GTTAGGCCACCCACAAGAATGAAGTGGCAGCTGGGCGTGGTGGCACACACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCAGCATGTCTATTGTTTaGTCTCCACCCTCTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: TDRQTDRQSVCLSPSLSLSMSIV*SPPSWV Trigger: AACCCAAGAGGGTGGAGACCAAACAATAGACATGCT...GAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | GGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCCCTGTGAGAGTCAGATaGGAATTTGTCAAAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: GQPSKAVKPNTDVLGFPSPVRVR*EFVKAH Trigger: GTGTGCTTTGACAAATTCCCATCTGACTCTCACAGG...GCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | GGTAAAGAAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGGAATATAAAGCAGAGTaGGCCGAAATACTGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: GKESMRQAVLVFPQIWPGEYKAE*AEILQH Trigger: GTGCTGCAGTATTTCGGCCCACTCTGCTTTATATTC...CCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTTCTTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | GGTAAAGAAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGAGAAACAGCAGATTGTaGTTGCAGGTGGCAATGATC | + |
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Preference number: 4 (lower is better) Translates to: GKESMRQAVLVFPQIWPGRNSRL*LQVAMI Trigger: GATCATTGCCACCTGCAACCACAATCTGCTGTTTCT...CCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTTCTTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCAATGATTATGATCAATaGCAGGTTTCCAGAGACGCC | + |
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Preference number: 4 (lower is better) Translates to: TDRQTDRQSVCLSPSLSLNDYDQ*QVSRDA Trigger: GGCGTCTCTGGAAACCTGGCATTGATCATAATCATT...GAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR GCA 90 bp | ATCAGGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCTTGGACACATCCGTATaGATGGTAGACATGGCTATG | + |
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Preference number: 4 (lower is better) Translates to: IRATIKSSQTQHRCPGLSLDTSV*MVDMAM Trigger: CATAGCCATGTCTACCATGCATACGGATGTGTCCAA...GGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | ATCAGGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAGCATGTCTATTGTTTaGTCTCCACCCTCTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: IRATIKSSQTQHRCPGLSSMSIV*SPPSWV Trigger: AACCCAAGAGGGTGGAGACCAAACAATAGACATGCT...GGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACAGGACATCTAGTCAAAACTGTTGCCAGAGAGCAAGTGACACATTTTaGAAGGGCTCGTCGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHRTSSQNCCQRASDTF*KGSSVR Trigger: TCTGACCGACGAGCCCTTCCAAAATGTGTCACTTGC...TCTCTGGCAACAGTTTTGACTAGATGTCCTGTGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | AAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATGAATATAAAGCAGAGTaGGCCGAAATACTGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KACGRLCLFFHRYGLGPYEYKAE*AEILQH Trigger: GTGCTGCAGTATTTCGGCCCACTCTGCTTTATATTC...ATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | AAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATCGATCAGAATGTTGGTaGCATTTCTCATCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KACGRLCLFFHRYGLGPYRSECW*HFSSPS Trigger: AGAAGGAGATGAGAAATGTCACCAACATTCTGATCG...ATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR GCA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAATTGGACACATCCGTATaGATGGTAGACATGGCTATG | + |
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Preference number: 4 (lower is better) Translates to: LAGNEGSPGSWKSHLILKLDTSV*MVDMAM Trigger: CATAGCCATGTCTACCATGCATACGGATGTGTCCAA...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | CAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGCGGGCATTATAGTGAATTaGGTGATTTTCAACCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: QPSKAVKPNTDVLGFPSAGIIVN*VIFNLG Trigger: TCCAAGGTTGAAAATCACTCAATTCACTATAATGCC...CGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR TCA 90 bp | GGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGGCATTATAGTGAATTaGGTGATTTTCAACCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GQPSKAVKPNTDVLGFPSGIIVN*VIFNLG Trigger: TCCAAGGTTGAAAATCACTCAATTCACTATAATGCC...GCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACAGGACATCTAGTCAAAACTGTTGCCAGAGAAGAAACAGCAGATTGTaGTTGCAGGTGGCAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHRTSSQNCCQRRNSRL*LQVAMI Trigger: GATCATTGCCACCTGCAACCACAATCTGCTGTTTCT...TCTCTGGCAACAGTTTTGACTAGATGTCCTGTGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACAGGACATCTAGTCAAAACTGTTGCCAGAGAGGAAGTCACAAAAGTTaGAGAAGAACTGCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHRTSSQNCCQRGSHKS*RRTASL Trigger: GAGACTTGCAGTTCTTCTTCAACTTTTGTGACTTCC...TCTCTGGCAACAGTTTTGACTAGATGTCCTGTGTGTGTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CCA 90 bp | CACATACATAAAGAAAGACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCCTGTGAGAGTCAGATaGGAATTTGTCAAAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HIHKERQTDRQTGSLSVSPVRVR*EFVKAH Trigger: GTGTGCTTTGACAAATTCCCATCTGACTCTCACAGG...AGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGTCTTTCTTTATGTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTGAAAAGGTGTTCTTTACTTATCTTTATCTTAGGCAAGACTCAATTAGGAGCCGTTCCACAGCGATaGGAACCAGCGAGAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLKRCSLLIFILGKTQLGAVPQR*EPARKW Trigger: CCATTTTCTCGCTGGTTCTCATCGCTGTGGAACGGC...TCCTAATTGAGTCTTGCCTAAGATAAAGATAAGTAAAGAACACCTTTTCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR TCA 90 bp | CACATACATAAAGAAAGACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTGGAAGTCACAAAAGTTaGAGAAGAACTGCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIHKERQTDRQTGSLSVSGSHKS*RRTASL Trigger: GAGACTTGCAGTTCTTCTTCAACTTTTGTGACTTCC...AGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGTCTTTCTTTATGTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR GCA 90 bp | CACATACATAAAGAAAGACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTAATGATTATGATCAATaGCAGGTTTCCAGAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: HIHKERQTDRQTGSLSVSNDYDQ*QVSRDA Trigger: GGCGTCTCTGGAAACCTGGCATTGATCATAATCATT...AGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGTCTTTCTTTATGTATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CCA 90 bp | GGACATCTAGTCAAAACTGTTGCCAGAGATAGATTACAAAGTAATCTAGATTTCTTCGCTTGGTCTCACTaGACCTGTACTTACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLVKTVARDRLQSNLDFFAWSH*TCTYCP Trigger: GGGACAGTAAGTACAGGTCCAGTGAGACCAAGCGAA...GAAATCTAGATTACTTTGTAATCTATCTCTGGCAACAGTTTTGACTAGATGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR TCA 90 bp | GGACATCTAGTCAAAACTGTTGCCAGAGATAGATTACAAAGTAATCTAGATTTCAGAAAATGGATACTGTaGTGGAGACACACTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: GHLVKTVARDRLQSNLDFRKWIL*WRHTVQ Trigger: TTGTACAGTGTGTCTCCATCACAGTATCCATTTTCT...GAAATCTAGATTACTTTGTAATCTATCTCTGGCAACAGTTTTGACTAGATGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CCA 90 bp | CAGCACCAGGAGGAGAGTCGTGTAAGACAGCCTGTGAGAGTCAGATaGGAATTTGTCAAAGCACACATACTTGTCCTTGAACGCCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QHQEESRVRQPVRVR*EFVKAHILVLERRK Trigger: CTTGCGGCGTTCAAGGACAAGTATGTGTGCTTTGACAAATTCCCATCTGACTCTCACAGGCTGTCTTACACGACTCTCCTCCTGGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATCAGTCGAACACAGTGTaGAAGATGGTAAGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KACGRLCLFFHRYGLGPYQSNTV*KMVRGS Trigger: GCTGCCCCTTACCATCTTCAACACTGTGTTCGACTG...ATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATGCTCTGAGCAGCAACAGCAGATTGTGGTaGCAGGTGGCAATGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCLFFHRYGLGPYALSSNSRLW*QVAMIW Trigger: CCAGATCATTGCCACCTGCAACCACAATCTGCTGTT...GCTGCTCAGAGCATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGCGAAGCATGTCTATTGTTaGGTCTCCACCCTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPSKAVKPNTDVLGFPSAKHVYC*VSTLLG Trigger: ACCCAAGAGGGTGGAGACCAAACAATAGACATGCTT...CGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGCGATGATGTTGATTCGCTaGGTCTCACTGGACCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QPSKAVKPNTDVLGFPSAMMLIR*VSLDLY Trigger: GTACAGGTCCAGTGAGACCAAGCGAATCAACATCAT...CGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCTTTCTAACAGCAGATTGTGGTaGCAGGTGGCAATGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTDRQAVCLSLSFSLSLSNSRLW*QVAMIW Trigger: CCAGATCATTGCCACCTGCAACCACAATCTGCTGTT...AGAAAGAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATGCGGCAGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATCTCGTCGGTCAGAATTaGATAGATCACAAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KACGRLCLFFHRYGLGPYLVGQN*IDHKGQ Trigger: CTGCCCTTTGTGATCTATCAAATTCTGACCGACGAG...ATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCTGCCGCATGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCTTACTGTCCCGGATCTaGTCCATCATGTTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GQPSKAVKPNTDVLGFPSLLSRI*SIMLFL Trigger: GAGAAACAACATGATGGACAAGATCCGGGACAGTAA...GCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAAGCGCGTTACTGTCCCGGATCTaGTCCATCATGTTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QPSKAVKPNTDVLGFPSALLSRI*SIMLFL Trigger: GAGAAACAACATGATGGACAAGATCCGGGACAGTAA...CGCGCTTGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCAATGATGTTGATTCGCTaGGTCTCACTGGACCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQPSKAVKPNTDVLGFPMMLIR*VSLDLY Trigger: GTACAGGTCCAGTGAGACCAAGCGAATCAACATCAT...TGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAAGAGAGCAGCATGATGTaGATTCGCTTGGTCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGNEGSPGSWKSHLILKESSMM*IRLVSL Trigger: CAGTGAGACCAAGCGAATCAACATCATGCTGCTCTC...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS TCA 90 bp | TGTGAGAGTCAGATGGGAATTTGTCAAAGCACACATACTTGTCCTTaGACGCCGCAAGTGACACATTTTGGAAGGGCTCGTCGGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CESQMGICQSTHTCP*TPQVTHFGRARRSE Trigger: TTCTGACCGACGAGCCCTTCCAAAATGTGTCACTTGCGGCGTTCAAGGACAAGTATGTGTGCTTTGACAAATTCCCATCTGACTCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAACTCGTCGGTCAGAATTaGATAGATCACAAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAGNEGSPGSWKSHLILKLVGQN*IDHKGQ Trigger: CTGCCCTTTGTGATCTATCAAATTCTGACCGACGAG...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CACATACATAAAGAAAGACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCAGTCGAACACAGTGTaGAAGATGGTAAGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HIHKERQTDRQTGSLSVSQSNTV*KMVRGS Trigger: GCTGCCCCTTACCATCTTCAACACTGTGTTCGACTG...AGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGTCTTTCTTTATGTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | ACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTCTCCTTCTCTCTCTCTCCGGAAGTCACAAAAGTaGAAGAAGAACTGCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TDRQTDRQSVCLSPSLSLRKSQK*KKNCKS Trigger: AGACTTGCAGTTCTTCTTCAACTTTTGTGACTTCCG...GAGAGAGAGAGAAGGAGAGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTGCTTGTTTTTCCACAGATATGGCCTGGGACCATATGCTCTGAGCAGCATCTTGTCCATCATGTaGTTTCTCCTTTTCAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RLCLFFHRYGLGPYALSSILSIM*FLLFKR Trigger: TCGCTTGAAAAGGAGAAACAACATGATGGACAAGAT...GCTGCTCAGAGCATATGGTCCCAGGCCATATCTGTGGAAAAACAAGCACAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCAACCATCAAAAGCAGTCAAACCCAACACAGATGTCCTGGGCTTTCCACGGAAGTCACAAAAGTaGAAGAAGAACTGCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGQPSKAVKPNTDVLGFPRKSQK*KKNCKS Trigger: AGACTTGCAGTTCTTCTTCAACTTTTGTGACTTCCG...TGGAAAGCCCAGGACATCTGTGTTGGGTTTGACTGCTTTTGATGGTTGCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS TCA 90 bp | TGGGAATTTGTCAAAGCACACATACTTGTCCTTGAACGCCGCAAGTaGCACATTTTGGAAGGGCTCGTCGGTCAGAATTTGATAGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: WEFVKAHILVLERRK*HILEGLVGQNLIDH Trigger: GTGATCTATCAAATTCTGACCGACGAGCCCTTCCAAAATGTGTCACTTGCGGCGTTCAAGGACAAGTATGTGTGCTTTGACAAATTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAATTCACGATCAGAATGTaGGTGACATTTCTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAGNEGSPGSWKSHLILKFTIRM*VTFLIS Trigger: GGAGATGAGAAATGTCACCAACATTCTGATCGTGAA...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS TCA 90 bp | ATATACAAAAGTGAACGGGAGACACATGACCGCAACGAGCAAGTCTaGGAAGGAGAGGTTCACGATCAGAATGTTGGTGACATTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IYKSERETHDRNEQV*EGEVHDQNVGDISH Trigger: ATGAGAAATGTCACCAACATTCTGATCGTGAACCTCTCCTTCTCAGACTTGCTCGTTGCGGTCATGTGTCTCCCGTTCACTTTTGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS TCA 90 bp | CTATGGTCTCGTAGTCATCGTCTCGAGACCGGAAGTCACAAAAGTTaGAGAAGAACTGCAAGTCTCTCTGGAAATTTTTGTTCAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LWSRSHRLETGSHKS*RRTASLSGNFCSGI Trigger: GATTCCTGAACAAAAATTTCCAGAGAGACTTGCAGTTCTTCTTCAACTTTTGTGACTTCCGGTCTCGAGACGATGACTACGAGACCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGGAACGAAGGTAGTCCGGGGTCTTGGAAATCTCATCTGATCTTGAAAAGGCATTATAGTGAATaGAGTGATTTTCAACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAGNEGSPGSWKSHLILKRHYSE*SDFQPW Trigger: CCAAGGTTGAAAATCACTCAATTCACTATAATGCCT...TTTCAAGATCAGATGAGATTTCCAAGACCCCGGACTACCTTCGTTCCCTGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CACATACATAAAGAAAGACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTATCTTGTCCATCATGTaGTTTCTCCTTTTCAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HIHKERQTDRQTGSLSVSILSIM*FLLFKR Trigger: TCGCTTGAAAAGGAGAAACAACATGATGGACAAGAT...AGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGTCTTTCTTTATGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CACATACATAAAGAAAGACAGACAGACAGACAGACAGGCAGTCTGTCTGTCTCTAGGCATTATAGTGAATaGAGTGATTTTCAACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HIHKERQTDRQTGSLSVSRHYSE*SDFQPW Trigger: CCAAGGTTGAAAATCACTCAATTCACTATAATGCCT...AGAGACAGACAGACTGCCTGTCTGTCTGTCTGTCTGTCTTTCTTTATGTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTGAAAAGGTGTTCTTTACTTATCTTTATCTTAGGCAAGACTCAATTAGGAGAGAGCAGCATGATGTaGATTCGCTTGGTCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QLKRCSLLIFILGKTQLGESSMM*IRLVSL Trigger: CAGTGAGACCAAGCGAATCAACATCATGCTGCTCTC...TCCTAATTGAGTCTTGCCTAAGATAAAGATAAGTAAAGAACACCTTTTCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS-3UTR CAA 90 bp | GGACATCTAGTCAAAACTGTTGCCAGAGATAGATTACAAAGTAATCTAGATTTCTTCACGATCAGAATGTaGGTGACATTTCTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GHLVKTVARDRLQSNLDFFTIRM*VTFLIS Trigger: GGAGATGAGAAATGTCACCAACATTCTGATCGTGAA...GAAATCTAGATTACTTTGTAATCTATCTCTGGCAACAGTTTTGACTAGATGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 90 bp | AGCCAGCAGACGGCGAAGGCGACCACAATGGAGAGCAGCATGATGTaGATTCGCTTGGTCTCACTGGACCTGTACTTACTGTCCCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SQQTAKATTMESSMM*IRLVSLDLYLLSRI Trigger: GATCCGGGACAGTAAGTACAGGTCCAGTGAGACCAAGCGAATCAACATCATGCTGCTCTCCATTGTGGTCGCCTTCGCCGTCTGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 90 bp | ACGGCGAAGGCGACCACAATGGAGAGCAGCATGATGTTGATTCGCTaGGTCTCACTGGACCTGTACTTACTGTCCCGGATCTTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TAKATTMESSMMLIR*VSLDLYLLSRILSI Trigger: GATGGACAAGATCCGGGACAGTAAGTACAGGTCCAGTGAGACCAAGCGAATCAACATCATGCTGCTCTCCATTGTGGTCGCCTTCGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 72 bp | GCGACCACAATGGAGAGCAGCATGATGTTGATTCGCTaGGTCTCACTGGACCTGTACTTACTGTCCCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: ATTMESSMMLIR*VSLDLYLLSRI Trigger: GATCCGGGACAGTAAGTACAGGTCCAGTGAGACCAAGCGAATCAACATCATGCTGCTCTCCATTGTGGTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 72 bp | ACGGCGAAGGCGACCACAATGGAGAGCAGCATGATGTaGATTCGCTTGGTCTCACTGGACCTGTACTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: TAKATTMESSMM*IRLVSLDLYLL Trigger: CAGTAAGTACAGGTCCAGTGAGACCAAGCGAATCAACATCATGCTGCTCTCCATTGTGGTCGCCTTCGCCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS TCA 72 bp | AGTGAACGGGAGACACATGACCGCAACGAGCAAGTCTaGGAAGGAGAGGTTCACGATCAGAATGTTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SERETHDRNEQV*EGEVHDQNVGD Trigger: GTCACCAACATTCTGATCGTGAACCTCTCCTTCTCAGACTTGCTCGTTGCGGTCATGTGTCTCCCGTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 72 bp | TTAAATGCGACTGGGCTAGCCTGCTTCAGAGACGTCTaGGACACATCCGTATGCATGGTAGACATGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: LNATGLACFRDV*DTSVCMVDMAM Trigger: CATAGCCATGTCTACCATGCATACGGATGTGTCCAAGACGTCTCTGAAGCAGGCTAGCCCAGTCGCATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS TCA 72 bp | GTCAAAGCACACATACTTGTCCTTGAACGCCGCAAGTaGCACATTTTGGAAGGGCTCGTCGGTCAGAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: VKAHILVLERRK*HILEGLVGQNL Trigger: CAAATTCTGACCGACGAGCCCTTCCAAAATGTGTCACTTGCGGCGTTCAAGGACAAGTATGTGTGCTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 72 bp | TCAGATGGGAATTTGTCAAAGCACACATACTTGTCCTaGAACGCCGCAAGTGACACATTTTGGAAGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SDGNLSKHTYLS*NAASDTFWKGS Trigger: CGAGCCCTTCCAAAATGTGTCACTTGCGGCGTTCAAGGACAAGTATGTGTGCTTTGACAAATTCCCATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 72 bp | TTGGTCTCACTGGACCTGTACTTACTGTCCCGGATCTaGTCCATCATGTTGTTTCTCCTTTTCAAGCGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LVSLDLYLLSRI*SIMLFLLFKRM Trigger: CATTCGCTTGAAAAGGAGAAACAACATGATGGACAAGATCCGGGACAGTAAGTACAGGTCCAGTGAGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
||
| CDS CAA 90 bp | TTGATTCGCTTGGTCTCACTGGACCTGTACTTACTGTCCCGGATCTaGTCCATCATGTTGTTTCTCCTTTTCAAGCGAATGTATATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LIRLVSLDLYLLSRI*SIMLFLLFKRMYIL Trigger: CAAGATATACATTCGCTTGAAAAGGAGAAACAACATGATGGACAAGATCCGGGACAGTAAGTACAGGTCCAGTGAGACCAAGCGAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS TCA 72 bp | CGTAGTCATCGTCTCGAGACCGGAAGTCACAAAAGTTaGAGAAGAACTGCAAGTCTCTCTGGAAATTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RSHRLETGSHKS*RRTASLSGNFC Trigger: ACAAAAATTTCCAGAGAGACTTGCAGTTCTTCTTCAACTTTTGTGACTTCCGGTCTCGAGACGATGACTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS CAA 72 bp | GACCTGTACTTACTGTCCCGGATCTTGTCCATCATGTaGTTTCTCCTTTTCAAGCGAATGTATATCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: DLYLLSRILSIM*FLLFKRMYILK Trigger: CTTCAAGATATACATTCGCTTGAAAAGGAGAAACAACATGATGGACAAGATCCGGGACAGTAAGTACAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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| CDS CAA 72 bp | CCAGAAGTGGAGAATTCTCTGAGGCATTATAGTGAATaGAGTGATTTTCAACCTTGGAGAACAGAGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PEVENSLRHYSE*SDFQPWRTELS Trigger: ACTCAACTCTGTTCTCCAAGGTTGAAAATCACTCAATTCACTATAATGCCTCAGAGAATTCTCCACTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039303.7 ENSMUST00000212588.2 |
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