RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPY (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029819

Ensembl transcript IDs: ENSMUST00000031843.7

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATGAGATaGGATGAGGGTGGAAACTTGGAAAAGTCGGGAGAACAAGTTTCA +
Preference number: 1 (lower is better)
Translates to: WHALVGQADWFQGMR*DEGGNLEKSGEQVS
Trigger: TGAAACTTGTTCTCCCGACTTTTCCAAGTTTCCACCCTCATCTCATCTCATCCCCTGAAACCAGTCTGCCTGTCCCACCAATGCATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
3UTR CCA 90 bp ACTTTATTTAAACACACATATATACAACAACAACAACAAGGGAAATaGGGCGGAGTCCAGCCTAGTGGTGGCATGCATTGGTGGGACAGG +
Preference number: 1 (lower is better)
Translates to: TLFKHTYIQQQQQGK*GGVQPSGGMHWWDR
Trigger: CCTGTCCCACCAATGCATGCCACCACTAGGCTGGACTCCGCCCCATTTCCCTTGTTGTTGTTGTTGTATATATGTGTGTTTAAATAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
3UTR-3UTR TCA 90 bp GCGGAGTCCAGCCTAGTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATGAGATGAGATaGGGGTGGAAACTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: AESSLVVACIGGTGRLVSGDEMR*GWKLGK
Trigger: TTTTCCAAGTTTCCACCCTCATCTCATCTCATCCCC...TGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCACTAGGCTGGACTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
3UTR-3UTR TCA 90 bp TACAACAACAACAACAAGGGAAATGGGGCGGAGTCCAGCCTAGTGGTGGCATGCACTGGTTTCAGGGGATaGGATGAGATGAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: YNNNNKGNGAESSLVVACTGFRG*DEMRVE
Trigger: TTCCACCCTCATCTCATCTCATCCCCTGAAACCAGT...GCATGCCACCACTAGGCTGGACTCCGCCCCATTTCCCTTGTTGTTGTTGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
3UTR-3UTR CAA 90 bp TACAACAACAACAACAAGGGAAATGGGGCGGAGTCCAGCCTAGTGGTGGCATGCGATGAGGGTGGAAACTaGGAAAAGTCGGGAGAACAA +
Preference number: 3 (lower is better)
Translates to: YNNNNKGNGAESSLVVACDEGGN*EKSGEQ
Trigger: TTGTTCTCCCGACTTTTCCAAGTTTCCACCCTCATC...GCATGCCACCACTAGGCTGGACTCCGCCCCATTTCCCTTGTTGTTGTTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
3UTR TCA 72 bp ATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATaGGATGAGATGAGGGTGGAAACTTGGAAAAGTCGG +
Preference number: 3 (lower is better)
Translates to: MHWWDRQTGFRG*DEMRVETWKSR
Trigger: CCGACTTTTCCAAGTTTCCACCCTCATCTCATCTCATCCCCTGAAACCAGTCTGCCTGTCCCACCAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
3UTR CCA 72 bp AAACACACATATATACAACAACAACAACAAGGGAAATaGGGCGGAGTCCAGCCTAGTGGTGGCATGCATTGG +
Preference number: 3 (lower is better)
Translates to: KHTYIQQQQQGK*GGVQPSGGMHW
Trigger: CCAATGCATGCCACCACTAGGCTGGACTCCGCCCCATTTCCCTTGTTGTTGTTGTTGTATATATGTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR GCA 90 bp GTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATGAGATGAGATCTGGCCATGTCCTCTaGTGGCGCGTCCTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: VVACIGGTGRLVSGDEMRSGHVL*WRVLAR
Trigger: CCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAGA...TCTCATCTCATCCCCTGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR CCA 90 bp GTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATGAGATGAGACCGGATTGTCCGGCTTaGAGGGGTACCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVACIGGTGRLVSGDEMRPDCPA*RGTPQP
Trigger: TGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGG...TCTCATCTCATCCCCTGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR GCA 90 bp GCGGAGTCCAGCCTAGTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAACCCCTCAGCCAGAATaGCCAAACACACGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AESSLVVACIGGTGRLVSTPQPE*PNTRAE
Trigger: CTCTGCTCGTGTGTTTGGGCATTCTGGCTGAGGGGT...TGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCACTAGGCTGGACTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR GCA 90 bp GCGGAGTCCAGCCTAGTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCATGGGGGCGTTTTCTGTaGTTTCCTTCATTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: AESSLVVACIGGTGRLVSWGRFL*FPSLRG
Trigger: ACCTCTTAATGAAGGAAAGCACAGAAAACGCCCCCA...TGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCACTAGGCTGGACTCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR CCA 90 bp GTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATGAGATGAGACTTCAAGCCTTGTTCTaGGGGCGTTTTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VVACIGGTGRLVSGDEMRLQALF*GRFLCF
Trigger: AAAGCACAGAAAACGCCCCCAGAACAAGGCTTGAAG...TCTCATCTCATCCCCTGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CCA 90 bp TGGCCATGTCCTCTGCTGGCGCGTCCTCGCCCGGATTGTCCGGCTTaGAGGGGTACCCCTCAGCCAGAATGCCCAAACACACGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: WPCPLLARPRPDCPA*RGTPQPECPNTRAE
Trigger: CTCTGCTCGTGTGTTTGGGCATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CCA 90 bp GATGTAGTGTCGCAGAGCGGAGTAGTATCTGGCCATGTCCTCTGCTaGCGCGTCCTCGCCCGGATTGTCCGGCTTGGAGGGGTACCCCTC +
Preference number: 5 (lower is better)
Translates to: DVVSQSGVVSGHVLC*RVLARIVRLGGVPL
Trigger: GAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAGATACTACTCCGCTCTGCGACACTACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS GCA 90 bp CCTCGCCCGGATTGTCCGGCTTGGAGGGGTACCCCTCAGCCAGAATaGCCAAACACACGAGCAGAGATAGAGCGAGGGTCAGTCCACACA +
Preference number: 5 (lower is better)
Translates to: PRPDCPAWRGTPQPE*PNTRAEIERGSVHT
Trigger: TGTGTGGACTGACCCTCGCTCTATCTCTGCTCGTGTGTTTGGGCATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS GCA 90 bp ATTGATGTAGTGTCGCAGAGCGGAGTAGTATCTGGCCATGTCCTCTaGTGGCGCGTCCTCGCCCGGATTGTCCGGCTTGGAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: IDVVSQSGVVSGHVL*WRVLARIVRLGGVP
Trigger: GGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAGATACTACTCCGCTCTGCGACACTACATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR CAA 90 bp GTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAGGGGATGAGATGAGAGCGTCCTCGCCCGGATaGTCCGGCTTGGAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: VVACIGGTGRLVSGDEMRASSPG*SGLEGY
Trigger: GTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGC...TCTCATCTCATCCCCTGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR CAA 90 bp GCGGAGTCCAGCCTAGTGGTGGCATGCATTGGTGGGACAGGCAGACTGGTTTCAAAGGGTCTTCAAGCCTaGTTCTGGGGGCGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: AESSLVVACIGGTGRLVSKGLQA*FWGRFL
Trigger: CAGAAAACGCCCCCAGAACAAGGCTTGAAGACCCTT...TGAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCACTAGGCTGGACTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS-3UTR CAA 90 bp TACAACAACAACAACAAGGGAAATGGGGCGGAGTCCAGCCTAGTGGTGGCATGCTCAGGGCTGGATCTCTaGCCATATCTCTGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: YNNNNKGNGAESSLVVACSGLDL*PYLCLV
Trigger: CACCAGACAGAGATATGGCAAGAGATCCAGCCCTGA...GCATGCCACCACTAGGCTGGACTCCGCCCCATTTCCCTTGTTGTTGTTGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS GCA 90 bp ACCACATGGAAGGGTCTTCAAGCCTTGTTCTGGGGGCGTTTTCTGTaGTTTCCTTCATTAAGAGGTCTGAAATCAGTGTCTCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TTWKGLQALFWGRFL*FPSLRGLKSVSQGW
Trigger: CCAGCCCTGAGACACTGATTTCAGACCTCTTAATGAAGGAAAGCACAGAAAACGCCCCCAGAACAAGGCTTGAAGACCCTTCCATGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CAA 72 bp CTGGCCATGTCCTCTGCTGGCGCGTCCTCGCCCGGATaGTCCGGCTTGGAGGGGTACCCCTCAGCCAGAATG +
Preference number: 6 (lower is better)
Translates to: LAMSSAGASSPG*SGLEGYPSARM
Trigger: CATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CCA 72 bp CCTCTGCTGGCGCGTCCTCGCCCGGATTGTCCGGCTTaGAGGGGTACCCCTCAGCCAGAATGCCCAAACACA +
Preference number: 6 (lower is better)
Translates to: PLLARPRPDCPA*RGTPQPECPNT
Trigger: TGTGTTTGGGCATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CCA 72 bp TCGCAGAGCGGAGTAGTATCTGGCCATGTCCTCTGCTaGCGCGTCCTCGCCCGGATTGTCCGGCTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: SQSGVVSGHVLC*RVLARIVRLGG
Trigger: CCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAGATACTACTCCGCTCTGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CAA 72 bp TCCTCTGCTGGCGCGTCCTCGCCCGGATTGTCCGGCTaGGAGGGGTACCCCTCAGCCAGAATGCCCAAACAC +
Preference number: 6 (lower is better)
Translates to: SSAGASSPGLSG*EGYPSARMPKH
Trigger: GTGTTTGGGCATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS CAA 90 bp CTGGCCATGTCCTCTGCTGGCGCGTCCTCGCCCGGATTGTCCGGCTaGGAGGGGTACCCCTCAGCCAGAATGCCCAAACACACGAGCAGA +
Preference number: 6 (lower is better)
Translates to: LAMSSAGASSPGLSG*EGYPSARMPKHTSR
Trigger: TCTGCTCGTGTGTTTGGGCATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS GCA 72 bp GTGTCGCAGAGCGGAGTAGTATCTGGCCATGTCCTCTaGTGGCGCGTCCTCGCCCGGATTGTCCGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: VSQSGVVSGHVL*WRVLARIVRLG
Trigger: TCCAAGCCGGACAATCCGGGCGAGGACGCGCCAGCAGAGGACATGGCCAGATACTACTCCGCTCTGCGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS GCA 72 bp GATTGTCCGGCTTGGAGGGGTACCCCTCAGCCAGAATaGCCAAACACACGAGCAGAGATAGAGCGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: DCPAWRGTPQPE*PNTRAEIERGS
Trigger: TGACCCTCGCTCTATCTCTGCTCGTGTGTTTGGGCATTCTGGCTGAGGGGTACCCCTCCAAGCCGGACAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7
CDS GCA 72 bp AAGGGTCTTCAAGCCTTGTTCTGGGGGCGTTTTCTGTaGTTTCCTTCATTAAGAGGTCTGAAATCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: KGLQALFWGRFL*FPSLRGLKSVS
Trigger: AGACACTGATTTCAGACCTCTTAATGAAGGAAAGCACAGAAAACGCCCCCAGAACAAGGCTTGAAGACCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031843.7