Pregenerated sensors for NPVF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029831Ensembl transcript IDs: ENSMUST00000031853.8
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATAATGGCGCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTaGTCAGACCACAGGTCACGGCTCCGTAGCCTCTTGAAGTCGGGC | + |
|
Preference number: 1 (lower is better) Translates to: NNGAHRCSSLSTPQS*SDHRSRLRSLLKSG Trigger: GCCCGACTTCAAGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGCGCCATTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| 3UTR GCA 72 bp | GCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTaGTCAGACCACAGGTCACGGCTCCGTAGCCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AHRCSSLSTPQS*SDHRSRLRSLL Trigger: CAAGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGGGCAGGCTGGGGAAATaGCTCCTGGTCCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAHRCSSLSTPQSCSDHRGRLGK*LLVPAS Trigger: GGAGGCAGGGACCAGGAGCCATTTCCCCAGCCTGCC...CCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGACCTTTGGGGCAGGCTaGGGAAATGGCTCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAHRCSSLSTPQSCSDHRTFGAG*GNGSWS Trigger: GGACCAGGAGCCATTTCCCCAGCCTGCCCCAAAGGT...CCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCACTCGCTGGAGCCCAGTaGGTGCAGGGGTTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSSLSTPQSCSDHRSLAGAQ*VQGFLW Trigger: CCACAGAAACCCCTGCACTCACTGGGCTCCAGCGAG...TGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR GCA 90 bp | GCGCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTATGGCTCCTGGTCCCTaGCTCCATGTTGACCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALIDALPCQHHRAAQTTGMAPGP*LHVDPC Trigger: GCACGGGTCAACATGGAGGCAGGGACCAGGAGCCAT...ACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGATCTCAGGGGCAGGTTaGCTGCTGAGTGGGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GAHRCSSLSTPQSCSDHRISGAG*LLSGAL Trigger: AAGTGCCCCACTCAGCAGCCAACCTGCCCCTGAGAT...CCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR TCA 90 bp | ACACCACAGAGCTGCTCAGACCACAGGTCACGGCTCCGTAGCCTCTTGAAGTCGTTTCCACCAGGACTCTaGATTTCTTGGTGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPQSCSDHRSRLRSLLKSFPPGL*ISWCWQ Trigger: CTGCCAGCACCAAGAAATTCAGAGTCCTGGTGGAAA...CGACTTCAAGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | CATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCACGGAGTGGGGCACTTTGTTaGCAGGGGCTGGACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HRCSSLSTPQSCSDHRSRSGALC*QGLDSS Trigger: AGATGAGTCCAGCCCCTGCCAACAAAGTGCCCCACT...CCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR TCA 90 bp | ACACCACAGAGCTGCTCAGACCACAGGTCACGGCTCCGTAGCCTCTTGAAGTCGGAAAATGAGGCATCATaGACTCATCTGTACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPQSCSDHRSRLRSLLKSENEAS*THLYRR Trigger: CCTTCTGTACAGATGAGTTCATGATGCCTCATTTTC...CGACTTCAAGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | ACACCACAGAGCTGCTCAGACCACAGGTCACGGCTCCGTAGCCTCTTGAAGTCGTTTGTTGGCAGGGGCTaGACTCATCTTAATAACATT | + |
|
Preference number: 4 (lower is better) Translates to: TPQSCSDHRSRLRSLLKSFVGRG*THLNNI Trigger: AATGTTATTAAGATGAGTCCAGCCCCTGCCAACAAA...CGACTTCAAGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| 3UTR CAA 72 bp | ACTGACAGGAATAATGGCGCTCATCGATGCTCTTCCTaGTCAACACCACAGAGCTGCTCAGACCACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDRNNGAHRCSS*STPQSCSDHRS Trigger: TGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGCGCCATTATTCCTGTCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR TCA 90 bp | TACTTCCAGTTTACATTACAAGCATCCTTGATCCTGTTTAACAACCACCAACATGGGCAGGTTGGCTGCTaGGTGGGGCACTTTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFQFTLQASLILFNNHQHGQVGC*VGHFVG Trigger: GCCAACAAAGTGCCCCACTCAGCAGCCAACCTGCCC...ATGTTGGTGGTTGTTAAACAGGATCAAGGATGCTTGTAATGTAAACTGGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCATTCTGGTTTCCTTTCTaGATCATCTGTTTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHRCSSLSTPQSCSDHRSFWFPF*IICFHK Trigger: TTTGTGGAAACAGATGATGCAGAAAGGAAACCAGAA...TGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR GCA 90 bp | TACTTCCAGTTTACATTACAAGCATCCTTGATCCTGTTTAACAACCACCAACATCTGGAGCCCAGTGAGTaGAGGGGTTTCTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFQFTLQASLILFNNHQHLEPSE*RGFCGK Trigger: TTTGCCACAGAAACCCCTGCACTCACTGGGCTCCAG...ATGTTGGTGGTTGTTAAACAGGATCAAGGATGCTTGTAATGTAAACTGGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACATTACAAGCATCCTTGATCCTGTTTAACAACCACCAACATAACTTAGTTCTCCCAAACCTTTaGGGCAGGCTGGGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QFTLQASLILFNNHQHNLVLPNL*GRLGKW Trigger: CCATTTCCCCAGCCTGCCCCAAAGGTTTGGGAGAAC...TAAGTTATGTTGGTGGTTGTTAAACAGGATCAAGGATGCTTGTAATGTAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACATTACAAGCATCCTTGATCCTGTTTAACAACCACCAACATAACTTATTCTTTTCTCATCTATaGTCCTTCCAAATCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QFTLQASLILFNNHQHNLFFSHL*SFQISG Trigger: CCCTGAGATTTGGAAGGACCATAGATGAGAAAAGAA...TAAGTTATGTTGGTGGTTGTTAAACAGGATCAAGGATGCTTGTAATGTAAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| 3UTR CAA 72 bp | GACAAAAGTTACTTCCAGTTTACATTACAAGCATCCTaGATCCTGTTTAACAACCACCAACATAACTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DKSYFQFTLQAS*ILFNNHQHNLN Trigger: GTTTAAGTTATGTTGGTGGTTGTTAAACAGGATCAAGGATGCTTGTAATGTAAACTGGAAGTAACTTTTGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCACGGCTCCGTAGCCTCTGCTGAGTGGGGCACTTaGTTGGCAGGGGCTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PCQHHRAAQTTGHGSVASAEWGT*LAGAGL Trigger: GAGTCCAGCCCCTGCCAACAAAGTGCCCCACTCAGC...AGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCAGTCCCTGCCTCCATGTaGACCCGTGCTGCGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHRCSSLSTPQSCSDHRSVPASM*TRAAGL Trigger: AAGCCCCGCAGCACGGGTCAACATGGAGGCAGGGAC...TGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS TCA 90 bp | TTGGTGCTGGCAGATCATGACGTAGAGCAACTCGCTGGAGCCCAGTaGGTGCAGGGGTTTCTGTGGCAAATCAGCGGGTGTCTTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVLADHDVEQLAGAQ*VQGFLWQISGCLGA Trigger: AGCCCCAAGACACCCGCTGATTTGCCACAGAAACCCCTGCACTCACTGGGCTCCAGCGAGTTGCTCTACGTCATGATCTGCCAGCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CAA 90 bp | ACACCACAGAGCTGCTCAGACCACAGGTCACGGCTCCGTAGCCTCTTGAAGTCGTGTTCTCCCAAACCTTaGGGGCAGGCTGGGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TPQSCSDHRSRLRSLLKSCSPKP*GQAGEM Trigger: CATTTCCCCAGCCTGCCCCAAAGGTTTGGGAGAACA...CGACTTCAAGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCACGGCTCCGTAGCCTCTTTTCCTTTTCCCCTTTaGGGATTCCTCTCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCQHHRAAQTTGHGSVASFPFPL*GFLSAG Trigger: CCCAGCTGAGAGGAATCCCAAAAGGGGAAAAGGAAA...AGAGGCTACGGAGCCGTGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCATGGGGCTTCTGGCTGTaGTTCTCCCAAACCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHRCSSLSTPQSCSDHRSWGFWL*FSQTFG Trigger: CCCAAAGGTTTGGGAGAACAACAGCCAGAAGCCCCA...TGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS TCA 90 bp | TTCGCTTTCCACCAGGACTCTGAATTTCTTGGTGCTGGCAGATCATaGCGTAGAGCAACTCGCTGGAGCCCAGTGAGTGCAGGGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FAFHQDSEFLGAGRS*RRATRWSPVSAGVS Trigger: AGAAACCCCTGCACTCACTGGGCTCCAGCGAGTTGCTCTACGTCATGATCTGCCAGCACCAAGAAATTCAGAGTCCTGGTGGAAAGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATCGATGCTCTTCCTTGTCAACACCACAGAGCTGCTCAGACCACAGGTCAAGGACTCTGAATTTCTaGGTGCTGGCAGATCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AHRCSSLSTPQSCSDHRSRTLNF*VLADHD Trigger: GTCATGATCTGCCAGCACCAAGAAATTCAGAGTCCT...TGACCTGTGGTCTGAGCAGCTCTGTGGTGTTGACAAGGAAGAGCATCGATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS TCA 72 bp | GCAGATCATGACGTAGAGCAACTCGCTGGAGCCCAGTaGGTGCAGGGGTTTCTGTGGCAAATCAGCGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ADHDVEQLAGAQ*VQGFLWQISGC Trigger: ACACCCGCTGATTTGCCACAGAAACCCCTGCACTCACTGGGCTCCAGCGAGTTGCTCTACGTCATGATCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS CCA 72 bp | GTCCTTCCAAATCTCAGGGGCAGGTTGGCTGCTGAGTaGGGCACTTTGTTGGCAGGGGCTGGACTCATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VLPNLRGRLAAE*GTLLAGAGLIL Trigger: TAAGATGAGTCCAGCCCCTGCCAACAAAGTGCCCCACTCAGCAGCCAACCTGCCCCTGAGATTTGGAAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS CCA 72 bp | GTTTCTGTGGCAAATCAGCGGGTGTCTTGGGGCTTCTaGCTGTTGTTCTCCCAAACCTTTGGGGCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVANQRVSWGF*LLFSQTFGAGW Trigger: CCAGCCTGCCCCAAAGGTTTGGGAGAACAACAGCCAGAAGCCCCAAGACACCCGCTGATTTGCCACAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS GCA 72 bp | ATGGCTCCTGGTCCCTGCCTCCATGTTGACCCGTGCTaGGGGGCTTCTTTTCTCATCTATGGTCCTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: MAPGPCLHVDPC*GASFLIYGPSK Trigger: TTTGGAAGGACCATAGATGAGAAAAGAAGCCCCGCAGCACGGGTCAACATGGAGGCAGGGACCAGGAGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS CCA 72 bp | AGTGCAGGGGTTTCTGTGGCAAATCAGCGGGTGTCTTaGGGCTTCTGGCTGTTGTTCTCCCAAACCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGVSVANQRVS*GFWLLFSQTFG Trigger: CCCAAAGGTTTGGGAGAACAACAGCCAGAAGCCCCAAGACACCCGCTGATTTGCCACAGAAACCCCTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS CAA 72 bp | GAGTGCAGGGGTTTCTGTGGCAAATCAGCGGGTGTCTaGGGGCTTCTGGCTGTTGTTCTCCCAAACCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ECRGFCGKSAGV*GLLAVVLPNLW Trigger: CCAAAGGTTTGGGAGAACAACAGCCAGAAGCCCCAAGACACCCGCTGATTTGCCACAGAAACCCCTGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS CAA 90 bp | AAACGCTCCTCTCCTCGTTCGCTTTCCACCAGGACTCTGAATTTCTaGGTGCTGGCAGATCATGACGTAGAGCAACTCGCTGGAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KRSSPRSLSTRTLNF*VLADHDVEQLAGAQ Trigger: CTGGGCTCCAGCGAGTTGCTCTACGTCATGATCTGCCAGCACCAAGAAATTCAGAGTCCTGGTGGAAAGCGAACGAGGAGAGGAGCGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS TCA 72 bp | CACCAGGACTCTGAATTTCTTGGTGCTGGCAGATCATaGCGTAGAGCAACTCGCTGGAGCCCAGTGAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HQDSEFLGAGRS*RRATRWSPVSA Trigger: TGCACTCACTGGGCTCCAGCGAGTTGCTCTACGTCATGATCTGCCAGCACCAAGAAATTCAGAGTCCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS CAA 72 bp | TCTCCTCGTTCGCTTTCCACCAGGACTCTGAATTTCTaGGTGCTGGCAGATCATGACGTAGAGCAACTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRSLSTRTLNF*VLADHDVEQLA Trigger: AGCGAGTTGCTCTACGTCATGATCTGCCAGCACCAAGAAATTCAGAGTCCTGGTGGAAAGCGAACGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||
| CDS TCA 72 bp | TTCCGTCACCTTCTTTGCTGTGAAAATGAGGCATCATaGACTCATCTGTACAGAAGGTGTTTGATGTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FRHLLCCENEAS*THLYRRCLMLR Trigger: TCTTAACATCAAACACCTTCTGTACAGATGAGTTCATGATGCCTCATTTTCACAGCAAAGAAGGTGACGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031853.8 |
||