Pregenerated sensors for NPTXR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022421Ensembl transcript IDs: ENSMUST00000023057.10, ENSMUST00000175858.10
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTaGGTCACGTCTCGGGCTGAGTGGCCATGGAGAGCACAGACGGAC | + |
Preference number: 1 (lower is better) Translates to: GESRPCFPDMGCSLS*VTSRAEWPWRAQTD Trigger: GTCCGTCTGTGCTCTCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | CAGATCTGCAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATaGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTGGCCAT | + |
Preference number: 1 (lower is better) Translates to: QICSPEASLGHASLT*AAASPASRLGLSGH Trigger: ATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | CCTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTaGCCATGGAGAGCACAGACGGACAAAAGTGGTGGGTGGGGTAGG | + |
Preference number: 1 (lower is better) Translates to: PDMGCSLSCVTSRAE*PWRAQTDKSGGWGR Trigger: CCTACCCCACCCACCACTTTTGTCCGTCTGTGCTCTCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | CAGGCTAGAGTGACCCAGCAGGTCCTGTCTCAGGCATGGAGGGGGTaGGGTGGACAACCCTGCTGGTGGGCAAAGTTGCCAGTGGGTACA | + |
Preference number: 1 (lower is better) Translates to: QARVTQQVLSQAWRG*GGQPCWWAKLPVGT Trigger: TGTACCCACTGGCAACTTTGCCCACCAGCAGGGTTGTCCACCCCACCCCCTCCATGCCTGAGACAGGACCTGCTGGGTCACTCTAGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | TGGGGTAGAAGGGAAGGCCGGCGTGTAGACAGGCTGAGGAGGGATTaGCCCTTCAAAGTCCTGAAACTGACAGGCAATGGAGGGGCCCTG | + |
Preference number: 1 (lower is better) Translates to: WGRREGRRVDRLRRD*PFKVLKLTGNGGAL Trigger: CAGGGCCCCTCCATTGCCTGTCAGTTTCAGGACTTTGAAGGGGCAATCCCTCCTCAGCCTGTCTACACGCCGGCCTTCCCTTCTACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | CAAAATGGAAATGCAGATCTGCAGCCCAGAGGCGAGTCTCGGCCATaGTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGG | + |
Preference number: 1 (lower is better) Translates to: QNGNADLQPRGESRP*FPDMGCSLSCVTSR Trigger: CCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATCTGCATTTCCATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | GTGCCTCCCTGCACAGGTATAAGCAGGGCTCAAGGACAGGCAGTGTaGTTCACAGGGAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGG | + |
Preference number: 1 (lower is better) Translates to: VPPCTGISRAQGQAV*FTGKSTLEGLRGPG Trigger: CCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGTGAACCACACTGCCTGTCCTTGAGCCCTGCTTATACCTGTGCAGGGAGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | GACCCAGGGGCAACTCAGGGCCGCAGCTGTCTTGTTGGATGTGCTTaGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAG | + |
Preference number: 1 (lower is better) Translates to: DPGATQGRSCLVGCA*GDSRRLSGGSTCSE Trigger: CTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAAGCACATCCAACAAGACAGCTGCGGCCCTGAGTTGCCCCTGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | TGCCTCAACCCCTACATTGATGTGAGATACTGGTCCCTATCCAGGTaGCTGAGGGGACACCCATCCAGGGCAGGGCACTCTGGAGCAGTG | + |
Preference number: 1 (lower is better) Translates to: CLNPYIDVRYWSLSR*LRGHPSRAGHSGAV Trigger: CACTGCTCCAGAGTGCCCTGCCCTGGATGGGTGTCCCCTCAGCCACCTGGATAGGGACCAGTATCTCACATCAATGTAGGGGTTGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | CCTCGTTCCAAAGTGTCCAACCAGATGACTTCACATGCTCGCTGCTaGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCAGGGG | + |
Preference number: 1 (lower is better) Translates to: PRSKVSNQMTSHARC*RLSQGRSLFSIQQG Trigger: CCCCTGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGTGAAGTCATCTGGTTGGACACTTTGGAACGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR TCA 90 bp | GACAAAAGTGGTGGGTGGGGTAGGGCAAGAGGCACCGGTGCCCAGTaGTTCACCCAACCTGCTACTGTTCCAATCCATGGGAGAGGACCA | + |
Preference number: 1 (lower is better) Translates to: DKSGGWGRARGTGAQ*FTQPATVPIHGRGP Trigger: TGGTCCTCTCCCATGGATTGGAACAGTAGCAGGTTGGGTGAATCACTGGGCACCGGTGCCTCTTGCCCTACCCCACCCACCACTTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | GGGGTGCTGTGCCGTGTAGTTGCTCTCAAAATGGAAATGCAGATCTaGAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATGGGCT | + |
Preference number: 1 (lower is better) Translates to: GVLCRVVALKMEMQI*SPEASLGHASLTWA Trigger: AGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATCTGCATTTCCATTTTGAGAGCAACTACACGGCACAGCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | GGTCCTCGTTCCAAAGTGTCCAACCAGATGACTTCACATGCTCGCTaGTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCAG | + |
Preference number: 1 (lower is better) Translates to: GPRSKVSNQMTSHAR*WRLSQGRSLFSIQQ Trigger: CTGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGTGAAGTCATCTGGTTGGACACTTTGGAACGAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | TCCATGGGAGAGGACCAACAGGGCCTTGCATCCTCTGCTGTCTGTTaGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTG | + |
Preference number: 1 (lower is better) Translates to: SMGEDQQGLASSAVC*NSVCLGFSSHLLRL Trigger: CAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCTCTCCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | GCATCCTCCATCCTTTCCAGGGCCATGCAGAAAGAGGTGATATGGTaGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCAT | + |
Preference number: 1 (lower is better) Translates to: ASSILSRAMQKEVIW*LSHQALPGKHPLIH Trigger: ATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCATATCACCTCTTTCTGCATGGCCCTGGAAAGGATGGAGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | AACAGGGCCTTGCATCCTCTGCTGTCTGTTGGAACTCTGTCTGTCTaGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTGGGGTG | + |
Preference number: 1 (lower is better) Translates to: NRALHPLLSVGTLSV*AFPLTSSGCQGVGV Trigger: CACCCCAACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGATGCAAGGCCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR TCA 90 bp | GTCCTGGAGAAGAGAAGGACAGTCAAGGGAACTTCCAGGGTCATTTaGGCTTCCTGGCCAGACCTCAGCTCCCTCATCTACAAGCCAAGG | + |
Preference number: 1 (lower is better) Translates to: VLEKRRTVKGTSRVI*ASWPDLSSLIYKPR Trigger: CCTTGGCTTGTAGATGAGGGAGCTGAGGTCTGGCCAGGAAGCTCAAATGACCCTGGAAGTTCCCTTGACTGTCCTTCTCTTCTCCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | GTTCACAGGGAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTaGTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTC | + |
Preference number: 1 (lower is better) Translates to: VHREEHFGGTQRAWA*YVVLFDPRQVNGPL Trigger: GAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | GCCTCCAAATGGAAATCGCGCTGTTCCCGGCTGGCCAATCAACACTaGGCAAGTTACTTTACCTCTCATCCTTCTCTTGTGCACCACAGG | + |
Preference number: 1 (lower is better) Translates to: ASKWKSRCSRLANQH*ASYFTSHPSLVHHR Trigger: CCTGTGGTGCACAAGAGAAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGCGCGATTTCCATTTGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR TCA 90 bp | GTGCTGGGACTAGTAGATAGGAATTCAGTTTGCAAGGGAAGGGAGTaGCCACCGGGTCCTGGAGAAGAGAAGGACAGTCAAGGGAACTTC | + |
Preference number: 1 (lower is better) Translates to: VLGLVDRNSVCKGRE*PPGPGEEKDSQGNF Trigger: GAAGTTCCCTTGACTGTCCTTCTCTTCTCCAGGACCCGGTGGTCACTCCCTTCCCTTGCAAACTGAATTCCTATCTACTAGTCCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTGTTCTaGTTTCCATCCCAGCATCCTCCATCCTTTCCAGGGCCATGCAGA | + |
Preference number: 1 (lower is better) Translates to: SLSLSLSLSLSLSVF*FPSQHPPSFPGPCR Trigger: TCTGCATGGCCCTGGAAAGGATGGAGGATGCTGGGATGGAAAGCAGAACACTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 90 bp | AGTGTGGTTCACAGGGAAGAGCACTTTGGAGGGACTCAGAGGGCCTaGGCCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGC | + |
Preference number: 1 (lower is better) Translates to: SVVHREEHFGGTQRA*ACYVVLFDPRQVNG Trigger: GCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGTGAACCACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 90 bp | GTGGGCTCCAGTGAGCAGGCAGTTTCTGCTACATCCTTCCTAAGATaGTGTCTTCCCAAGGCCTCCTCTAAATCAATAGCAAAGGCCTCT | + |
Preference number: 1 (lower is better) Translates to: VGSSEQAVSATSFLR*CLPKASSKSIAKAS Trigger: AGAGGCCTTTGCTATTGATTTAGAGGAGGCCTTGGGAAGACAGCATCTTAGGAAGGATGTAGCAGAAACTGCCTGCTCACTGGAGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCAGAGGCTGGGCATAGGTaGGAGACCCCTCCCTCCCTG | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPAEAGHR*ETPPSL Trigger: CAGGGAGGGAGGGGTCTCTCACCTATGCCCAGCCTC...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GATCTGCAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCGGACAACCCTGCTGGTaGGCAAAGTTGCCAGTGGGT | + |
Preference number: 2 (lower is better) Translates to: DLQPRGESRPCFPDMGCSGQPCW*AKLPVG Trigger: ACCCACTGGCAACTTTGCCCACCAGCAGGGTTGTCC...GCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GATCTGCAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCCACCAGGCTCTGCCTaGGAAGCATCCCCTCATTCA | + |
Preference number: 2 (lower is better) Translates to: DLQPRGESRPCFPDMGCSPPGSA*EASPHS Trigger: TGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGG...GCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGGTGATTACAGCCCTTTaGCCTCCAGGGTTTTGGTCC | + |
Preference number: 2 (lower is better) Translates to: GESRPCFPDMGCSLSCVTVITAL*PPGFWS Trigger: GGACCAAAACCCTGGAGGCCAAAGGGCTGTAATCAC...CGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GGAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTATGGAGGGGGTGGGGTaGACAACCCTGCTGGTGGGC | + |
Preference number: 2 (lower is better) Translates to: GRALWRDSEGLGLLCCAVMEGVG*TTLLVG Trigger: GCCCACCAGCAGGGTTGTCCACCCCACCCCCTCCAT...AACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCCTCTGCTGTCTGTTaGAACTCTGTCTGTCTGGGC | + |
Preference number: 2 (lower is better) Translates to: GESRPCFPDMGCSLSCVTSSAVC*NSVCLG Trigger: GCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGA...CGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCACCACCAGGCTCTGCCTaGGAAGCATCCCCTCATTCA | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPAPPGSA*EASPHS Trigger: TGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGG...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | AAGGTGGGGGAGGAGGGCAGTGGAGGGTCCTCGTTCCAAAGTGTCCAACCAGATAGGCGGGATCAGGGGTaGCAGGCAGCTGGAGTTAAG | + |
Preference number: 2 (lower is better) Translates to: KVGEEGSGGSSFQSVQPDRRDQG*QAAGVK Trigger: CTTAACTCCAGCTGCCTGCCACCCCTGATCCCGCCT...ATCTGGTTGGACACTTTGGAACGAGGACCCTCCACTGCCCTCCTCCCCCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCAAGCAGTGGGTGCCCATaGGGAGAAGTGGGAGGTATA | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPASSGCP*GEVGGI Trigger: TATACCTCCCACTTCTCCTCATGGGCACCCACTGCT...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | CTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTGGCCATGGATCCTGGAAACTGAGGTaGGGCTTGAACCGACATGAA | + |
Preference number: 2 (lower is better) Translates to: LTWAAASPASRLGLSGHGSWKLR*GLNRHE Trigger: TTCATGTCGGTTCAAGCCTCACCTCAGTTTCCAGGA...TCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | AAGGTGGGGGAGGAGGGCAGTGGAGGGTCCTCGTTCCAAAGTGTCCAACCAGATTCTGGTGGGCTCCAGTaGGCAGGCAGTTTCTGCTAC | + |
Preference number: 2 (lower is better) Translates to: KVGEEGSGGSSFQSVQPDSGGLQ*AGSFCY Trigger: GTAGCAGAAACTGCCTGCTCACTGGAGCCCACCAGA...ATCTGGTTGGACACTTTGGAACGAGGACCCTCCACTGCCCTCCTCCCCCACCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | CCCGAGGTAGGCCTGGAGCATAGGGGATTTGAGGGTCAAAGGCTACCTCTACCCAGGTATAGCCAGGAGTaGGGTAGAAGGGAAGGCCGG | + |
Preference number: 2 (lower is better) Translates to: PEVGLEHRGFEGQRLPLPRYSQE*GRREGR Trigger: CCGGCCTTCCCTTCTACCCCACTCCTGGCTATACCT...GGGTAGAGGTAGCCTTTGACCCTCAAATCCCCTATGCTCCAGGCCTACCTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGATCTTTATACATCTCTaGCATCCCTTCTGCAGCCCG | + |
Preference number: 2 (lower is better) Translates to: GESRPCFPDMGCSLSCVTIFIHL*HPFCSP Trigger: CGGGCTGCAGAAGGGATGCCAGAGATGTATAAAGAT...CGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCAGCAAAAGGATGGGGATaGTGTGTCTGGTGGGCTCCA | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPAAKGWG*CVWWAP Trigger: TGGAGCCCACCAGACACACCATCCCCATCCTTTTGC...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCAGGCTGCAGCCTCTCCTaGGTCACGTCTCGGGCTGAG | + |
Preference number: 2 (lower is better) Translates to: LGRQQKIEWGLHMLRECSGCSLS*VTSRAE Trigger: CTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCC...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCAGGTATAGCCAGGAGTaGGGTAGAAGGGAAGGCCGG | + |
Preference number: 2 (lower is better) Translates to: MVAKPPGSAWEASPHSLCRYSQE*GRREGR Trigger: CCGGCCTTCCCTTCTACCCCACTCCTGGCTATACCT...GCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTTTGGTCCCTATCCAGGTaGCTGAGGGGACACCCATCC | + |
Preference number: 2 (lower is better) Translates to: EEHFGGTQRAWACYVVLFWSLSR*LRGHPS Trigger: GGATGGGTGTCCCCTCAGCCACCTGGATAGGGACCA...AAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCATGGCCTCCAGGGTTTTaGTCCCTAGCTGTTAGGGTA | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPAWPPGF*SLAVRV Trigger: TACCCTAACAGCTAGGGACCAAAACCCTGGAGGCCA...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTATGGAGGGGGTGGGGTaGACAACCCTGCTGGTGGGC | + |
Preference number: 2 (lower is better) Translates to: AVPGWPINTGQVTLPLILMEGVG*TTLLVG Trigger: GCCCACCAGCAGGGTTGTCCACCCCACCCCCTCCAT...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGAGTCCTGTCTCAGGCATaGAGGGGGTGGGGTGGACAA | + |
Preference number: 2 (lower is better) Translates to: RINQMVRIPCSVLSPGLRVLSQA*RGWGGQ Trigger: TTGTCCACCCCACCCCCTCCATGCCTGAGACAGGAC...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCACAAGGACAGGCAGTGTaGTTCACAGGGAAGAGCACT | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPAQGQAV*FTGKST Trigger: AGTGCTCTTCCCTGTGAACCACACTGCCTGTCCTTG...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCAGCAGGACAGTGTATATaGTGGGAGAGACCAAGCCAA | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPAAGQCI*WERPSQ Trigger: TTGGCTTGGTCTCTCCCATCATATACACTGTCCTGC...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTCAGGACAGGCTAGAGTaGCCCAGCAGGTCCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: GTLSVWAFPLTSSGCQGVQDRLE*PSRSCL Trigger: GAGACAGGACCTGCTGGGTCACTCTAGCCTGTCCTG...AACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGATCAGCAGGTTCTGGGTaGAGCCTCTGCAGCTCTCTC | + |
Preference number: 2 (lower is better) Translates to: RINQMVRIPCSVLSPGLRSAGSG*SLCSSL Trigger: GAGAGAGCTGCAGAGGCTTCACCCAGAACCTGCTGA...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCACTCACAAAAGACACTTaGCCTAGCACTGGGGCTGAT | + |
Preference number: 2 (lower is better) Translates to: TCSLLAAQPGKESVLHPALTKDT*PSTGAD Trigger: ATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAG...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGAGGACAACCCTGCTGGTaGGCAAAGTTGCCAGTGGGT | + |
Preference number: 2 (lower is better) Translates to: RINQMVRIPCSVLSPGLRGQPCW*AKLPVG Trigger: ACCCACTGGCAACTTTGCCCACCAGCAGGGTTGTCC...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCACAGGACAGGCTAGAGTaGCCCAGCAGGTCCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: LGRQQKIEWGLHMLRECSQDRLE*PSRSCL Trigger: GAGACAGGACCTGCTGGGTCACTCTAGCCTGTCCTG...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCGAAACTGACAGGCAATaGAGGGGCCCTGAACAAGGT | + |
Preference number: 2 (lower is better) Translates to: MVAKPPGSAWEASPHSLCETDRQ*RGPEQG Trigger: ACCTTGTTCAGGGCCCCTCCATTGCCTGTCAGTTTC...GCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCAACGTCTCGGGCTGAGTaGCCATGGAGAGCACAGACG | + |
Preference number: 2 (lower is better) Translates to: LGRQQKIEWGLHMLRECSTSRAE*PWRAQT Trigger: CGTCTGTGCTCTCCATGGCCACTCAGCCCGAGACGT...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGCATGCTTCCCTGACATaGGCTGCAGCCTCTCCTGCG | + |
Preference number: 2 (lower is better) Translates to: QPVSSQKTLDLALGLMSLHASLT*AAASPA Trigger: CGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATG...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGTGCAAGGGAAGGGAGTaGCCACCGGGTCCTGGAGAA | + |
Preference number: 2 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRCKGRE*PPGPGE Trigger: TTCTCCAGGACCCGGTGGTCACTCCCTTCCCTTGCA...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 90 bp | CCAACCTGCTACTGTTCCAATCCATGGGAGAGGACCAACAGGGCCTaGCATCCTCTGCTGTCTGTTGGAACTCTGTCTGTCTGGGCTTTT | + |
Preference number: 2 (lower is better) Translates to: PTCYCSNPWERTNRA*HPLLSVGTLSVWAF Trigger: AAAAGCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCTCTCCCATGGATTGGAACAGTAGCAGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 90 bp | GGCCGCAGCTGTCTTGTTGGATGTGCTTGGGGAGACAGCAGAAGATaGAGTGGGGGCTCCACATGCTCAGAGAATGTTCACAGCACAATA | + |
Preference number: 2 (lower is better) Translates to: GRSCLVGCAWGDSRR*SGGSTCSENVHSTI Trigger: TATTGTGCTGTGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAAGCACATCCAACAAGACAGCTGCGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGAGCAGTGGGTGCCCATaGGGAGAAGTGGGAGGTATA | + |
Preference number: 2 (lower is better) Translates to: QPVSSQKTLDLALGLMSLSSGCP*GEVGGI Trigger: TATACCTCCCACTTCTCCTCATGGGCACCCACTGCT...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GGTGTCCCCAGAAGATATTTTGGTACCCTGTGTGAAAGCACGTGTCCTCTCAAGACCCCGCAGCCCCTGTaGGTAACCCAGGAAGATAGA | + |
Preference number: 2 (lower is better) Translates to: GVPRRYFGTLCESTCPLKTPQPL*VTQEDR Trigger: TCTATCTTCCTGGGTTACTCACAGGGGCTGCGGGGT...CTTGAGAGGACACGTGCTTTCACACAGGGTACCAAAATATCTTCTGGGGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | CTCTTGGGGAAGTTGGTAGGGACTAGGAGAAAGCGAGGCCCAGAGAGGGTAGGTATCTTTATACATCTCTaGCATCCCTTCTGCAGCCCG | + |
Preference number: 2 (lower is better) Translates to: LLGKLVGTRRKRGPERVGIFIHL*HPFCSP Trigger: CGGGCTGCAGAAGGGATGCCAGAGATGTATAAAGAT...ACCTACCCTCTCTGGGCCTCGCTTTCTCCTAGTCCCTACCAACTTCCCCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTTGGCCTCCAGGGTTTTaGTCCCTAGCTGTTAGGGTA | + |
Preference number: 2 (lower is better) Translates to: GTLSVWAFPLTSSGCQGVWPPGF*SLAVRV Trigger: TACCCTAACAGCTAGGGACCAAAACCCTGGAGGCCA...AACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTGTCCTGTCTCAGGCATaGAGGGGGTGGGGTGGACAA | + |
Preference number: 2 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCVLSQA*RGWGGQ Trigger: TTGTCCACCCCACCCCCTCCATGCCTGAGACAGGAC...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 90 bp | GTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATaGGTTGTTACTGGGCAACCGGGATCTCAGCAGGTTCTGGGTGAA | + |
Preference number: 2 (lower is better) Translates to: VSSQKTLDLALGLMS*VVTGQPGSQQVLGE Trigger: TTCACCCAGAACCTGCTGAGATCCCGGTTGCCCAGTAACAACCAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTGCAGGACAGTGTATATaGTGGGAGAGACCAAGCCAA | + |
Preference number: 2 (lower is better) Translates to: GTLSVWAFPLTSSGCQGVAGQCI*WERPSQ Trigger: TTGGCTTGGTCTCTCCCATCATATACACTGTCCTGC...AACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGAGCATGGAAATGTGACTaGGGTGCTGTTTCTCATCAC | + |
Preference number: 2 (lower is better) Translates to: RINQMVRIPCSVLSPGLRAWKCD*GAVSHH Trigger: GTGATGAGAAACAGCACCTCAGTCACATTTCCATGC...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTTGGGGTGGACAACCCTaGTGGTGGGCAAAGTTGCCA | + |
Preference number: 2 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCWGGQP*WWAKLP Trigger: TGGCAACTTTGCCCACCAGCAGGGTTGTCCACCCCA...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTCAAGGACAGGCAGTGTaGTTCACAGGGAAGAGCACT | + |
Preference number: 2 (lower is better) Translates to: AVPGWPINTGQVTLPLILQGQAV*FTGKST Trigger: AGTGCTCTTCCCTGTGAACCACACTGCCTGTCCTTG...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCATCCTCTGCTGTCTGTTaGAACTCTGTCTGTCTGGGC | + |
Preference number: 2 (lower is better) Translates to: LGRQQKIEWGLHMLRECSSSAVC*NSVCLG Trigger: GCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGA...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCGTTGGGGTGGGGAGGTaGCAGTTTAACCAGGGTGAC | + |
Preference number: 2 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGVGVGR*QFNQGD Trigger: GTCACCCTGGTTAAACTGCCACCTCCCCACCCCAAC...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 90 bp | ACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTaGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCTTTTCCATC | + |
Preference number: 2 (lower is better) Translates to: TLEGLRGPGPAMLCC*ILDKLMALSVLFSI Trigger: GATGGAAAAGAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCCCCAGGTCTAAGTTCTaGATCCAGCTGTCACCCAGC | + |
Preference number: 2 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGPRSKF*IQLSPS Trigger: GCTGGGTGACAGCTGGATTCAGAACTTAGACCTGGG...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | CAACACTGGGCAAGTTACTTTACCTCTCATCCTTCTCTTGTGCACCACAGGGCTTCACAGCACAATAGATaGGAGCAGGTGGGGACTTGG | + |
Preference number: 2 (lower is better) Translates to: QHWASYFTSHPSLVHHRASQHNR*EQVGTW Trigger: CCAAGTCCCCACCTGCTCTCATCTATTGTGCTGTGA...AGCCCTGTGGTGCACAAGAGAAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | GTTGGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTTCTCTCTCAGTGTTCTaGTTTCCATCCCAGCATCCT | + |
Preference number: 2 (lower is better) Translates to: VGTLSVWAFPLTSSGCQGSLSVF*FPSQHP Trigger: AGGATGCTGGGATGGAAAGCAGAACACTGAGAGAGA...ACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGGAAACTGACAGGCAATaGAGGGGCCCTGAACAAGGT | + |
Preference number: 2 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRETDRQ*RGPEQG Trigger: ACCTTGTTCAGGGCCCCTCCATTGCCTGTCAGTTTC...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGGGAACTCTGTCTGTCTaGGCTTTTCCTCTCACCTCC | + |
Preference number: 2 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRGTLSV*AFPLTS Trigger: GGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTTTTTGGTACCCTGTGTaGAAGCACGTGTCCTCTCAA | + |
Preference number: 2 (lower is better) Translates to: AVPGWPINTGQVTLPLILFWYPV*KHVSSQ Trigger: TTGAGAGGACACGTGCTTTCACACAGGGTACCAAAA...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTGCATGGAAATGTGACTaGGGTGCTGTTTCTCATCAC | + |
Preference number: 2 (lower is better) Translates to: AVPGWPINTGQVTLPLILAWKCD*GAVSHH Trigger: GTGATGAGAAACAGCACCTCAGTCACATTTCCATGC...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCATCTCTCTCAGTGTTCTaGTTTCCATCCCAGCATCCT | + |
Preference number: 2 (lower is better) Translates to: LGRQQKIEWGLHMLRECSSLSVF*FPSQHP Trigger: AGGATGCTGGGATGGAAAGCAGAACACTGAGAGAGA...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCAGTGGGGGCTCCACATaGTCAGAGAATGTTCACAGC | + |
Preference number: 2 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGSGGST*SENVHS Trigger: GCTGTGAACATTCTCTGAGCATGTGGAGCCCCCACT...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGCTCTCAAAATGGAAATaGAGATCTGCAGCCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRLSKWK*RSAAQR Trigger: CCTCTGGGCTGCAGATCTGCATTTCCATTTTGAGAG...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCCTGTCTTGTTGGATGTaGTTGGGGAGACAGCAGAAG | + |
Preference number: 2 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGLSCWM*LGRQQK Trigger: CTTCTGCTGTCTCCCCAAGCACATCCAACAAGACAG...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | CAACACTGGGCAAGTTACTTTACCTCTCATCCTTCTCTTGTGCACCACAGGGCTTTAACCAGGGTGACCTaGCATGGAAATGTGACTGAG | + |
Preference number: 2 (lower is better) Translates to: QHWASYFTSHPSLVHHRALTRVT*HGNVTE Trigger: CTCAGTCACATTTCCATGCCAGGTCACCCTGGTTAA...AGCCCTGTGGTGCACAAGAGAAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTAGGGTAGGTTCTTACTaGAAGCCACACAGCAAGTCA | + |
Preference number: 2 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCRVGSY*KPHSKS Trigger: TGACTTGCTGTGTGGCTTTCAGTAAGAACCTACCCT...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGGTTTCTCATCACCACTaGGACAAAGCAAAAGGATGG | + |
Preference number: 2 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRVSHHH*DKAKGW Trigger: CCATCCTTTTGCTTTGTCTCAGTGGTGATGAGAAAC...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | CGCACTCACACATACAGAGCATCTCGTGTTACTTATGTACAAAATAGGGCAAGGTCACAGCACAATAGATaGGAGCAGGTGGGGACTTGG | + |
Preference number: 2 (lower is better) Translates to: RTHTYRASRVTYVQNRARSQHNR*EQVGTW Trigger: CCAAGTCCCCACCTGCTCTCATCTATTGTGCTGTGA...CCTTGCCCTATTTTGTACATAAGTAACACGAGATGCTCTGTATGTGTGAGTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | GGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTAGAGCTTACAATGGATaGTTTTTCTCAGCTCTGACA | + |
Preference number: 2 (lower is better) Translates to: GTLSVWAFPLTSSGCQGVRAYNG*FFSALT Trigger: TGTCAGAGCTGAGAAAAACCATCCATTGTAAGCTCT...AACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR TCA 90 bp | CGCACTCACACATACAGAGCATCTCGTGTTACTTATGTACAAAATAGGGCAAGGCCATACACAGAGCCTTaGCCAGGTGCCTCTGTTTTT | + |
Preference number: 2 (lower is better) Translates to: RTHTYRASRVTYVQNRARPYTEP*PGASVF Trigger: AAAAACAGAGGCACCTGGTCAAGGCTCTGTGTATGG...CCTTGCCCTATTTTGTACATAAGTAACACGAGATGCTCTGTATGTGTGAGTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGTCCCCTCATTCATTGTaGCTCTGTTTTAGATGTTCT | + |
Preference number: 2 (lower is better) Translates to: QPVSSQKTLDLALGLMSLSPHSL*LCFRCS Trigger: AGAACATCTAAAACAGAGGCACAATGAATGAGGGGA...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCATCCCCTCATTCATTGTaGCTCTGTTTTAGATGTTCT | + |
Preference number: 2 (lower is better) Translates to: LGRQQKIEWGLHMLRECSSPHSL*LCFRCS Trigger: AGAACATCTAAAACAGAGGCACAATGAATGAGGGGA...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR GCA 90 bp | CAACACTGGGCAAGTTACTTTACCTCTCATCCTTCTCTTGTGCACCACAGGGCTAACAGTCTCGCTTTGTaGTGTGAGGATAAACCAGAT | + |
Preference number: 2 (lower is better) Translates to: QHWASYFTSHPSLVHHRANSLAL*CEDKPD Trigger: ATCTGGTTTATCCTCACAGCACAAAGCGAGACTGTT...AGCCCTGTGGTGCACAAGAGAAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CCA 90 bp | CGCACTCACACATACAGAGCATCTCGTGTTACTTATGTACAAAATAGGGCAAGGGTCATTGGTTGTTACTaGGCAACCGGGATCTCAGCA | + |
Preference number: 2 (lower is better) Translates to: RTHTYRASRVTYVQNRARVIGCY*ATGISA Trigger: TGCTGAGATCCCGGTTGCCCAGTAACAACCAATGAC...CCTTGCCCTATTTTGTACATAAGTAACACGAGATGCTCTGTATGTGTGAGTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CCA 90 bp | CAACACTGGGCAAGTTACTTTACCTCTCATCCTTCTCTTGTGCACCACAGGGCTAGCAAGAGCTTACAATaGATGGTTTTTCTCAGCTCT | + |
Preference number: 2 (lower is better) Translates to: QHWASYFTSHPSLVHHRASKSLQ*MVFLSS Trigger: AGAGCTGAGAAAAACCATCCATTGTAAGCTCTTGCT...AGCCCTGTGGTGCACAAGAGAAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CCA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTAGCAAGAGCTTACAATaGATGGTTTTTCTCAGCTCT | + |
Preference number: 2 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCSKSLQ*MVFLSS Trigger: AGAGCTGAGAAAAACCATCCATTGTAAGCTCTTGCT...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR GCA 72 bp | CTCCCTCCCTGGCTTCACGCCCCACACCCCCACCTCTaGTCCTTCTGCACTCTGAAGGAGGTGGCGTGGACC | + |
Preference number: 3 (lower is better) Translates to: LPPWLHAPHPHL*SFCTLKEVAWT Trigger: GGTCCACGCCACCTCCTTCAGAGTGCAGAAGGAGCAGAGGTGGGGGTGTGGGGCGTGAAGCCAGGGAGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | AGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATaGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTG | + |
Preference number: 3 (lower is better) Translates to: SPEASLGHASLT*AAASPASRLGL Trigger: CAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR GCA 72 bp | CGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTaGGTCACGTCTCGGGCTGAGTGGCCATGGAGAGCA | + |
Preference number: 3 (lower is better) Translates to: RPCFPDMGCSLS*VTSRAEWPWRA Trigger: TGCTCTCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | GGGGACACCCATCCAGGGCAGGGCACTCTGGAGCAGTaGGTGCCCATGAGGAGAAGTGGGAGGTATAGCCAG | + |
Preference number: 3 (lower is better) Translates to: GDTHPGQGTLEQ*VPMRRSGRYSQ Trigger: CTGGCTATACCTCCCACTTCTCCTCATGGGCACCCACTGCTCCAGAGTGCCCTGCCCTGGATGGGTGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | GTGACCCAGCAGGTCCTGTCTCAGGCATGGAGGGGGTaGGGTGGACAACCCTGCTGGTGGGCAAAGTTGCCA | + |
Preference number: 3 (lower is better) Translates to: VTQQVLSQAWRG*GGQPCWWAKLP Trigger: TGGCAACTTTGCCCACCAGCAGGGTTGTCCACCCCACCCCCTCCATGCCTGAGACAGGACCTGCTGGGTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | GGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTaGCCATGGAGAGCACAGACGGACAAAAGTGGTGGG | + |
Preference number: 3 (lower is better) Translates to: GCSLSCVTSRAE*PWRAQTDKSGG Trigger: CCCACCACTTTTGTCCGTCTGTGCTCTCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | CATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTaGGTGGCCATGGAGAGCACAGACGGACAAAAGTGG | + |
Preference number: 3 (lower is better) Translates to: HGLQPLLRHVSG*VAMESTDGQKW Trigger: CCACTTTTGTCCGTCTGTGCTCTCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR GCA 72 bp | AATGCAGATCTGCAGCCCAGAGGCGAGTCTCGGCCATaGTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTC | + |
Preference number: 3 (lower is better) Translates to: NADLQPRGESRP*FPDMGCSLSCV Trigger: GACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATCTGCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | GTGCCCATGAGGAGAAGTGGGAGGTATAGCCAGGAGTaGGGTAGAAGGGAAGGCCGGCGTGTAGACAGGCTG | + |
Preference number: 3 (lower is better) Translates to: VPMRRSGRYSQE*GRREGRRVDRL Trigger: CAGCCTGTCTACACGCCGGCCTTCCCTTCTACCCCACTCCTGGCTATACCTCCCACTTCTCCTCATGGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | GGGGTGGACAACCCTGCTGGTGGGCAAAGTTGCCAGTaGGTACAGGGGGTGATTACAGCCCTTTGGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: GVDNPAGGQSCQ*VQGVITALWPP Trigger: TGGAGGCCAAAGGGCTGTAATCACCCCCTGTACCCACTGGCAACTTTGCCCACCAGCAGGGTTGTCCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CAA 90 bp | TTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTGGCCATGGAGCATAGGGGATTaGAGGGTCAAAGGCTACCTC | + |
Preference number: 3 (lower is better) Translates to: FPDMGCSLSCVTSRAEWPWSIGD*RVKGYL Trigger: GAGGTAGCCTTTGACCCTCAAATCCCCTATGCTCCA...TGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | CTGCTGGTGGGCAAAGTTGCCAGTGGGTACAGGGGGTaGTTACAGCCCTTTGGCCTCCAGGGTTTTGGTCCC | + |
Preference number: 3 (lower is better) Translates to: LLVGKVASGYRG*LQPFGLQGFGP Trigger: GGGACCAAAACCCTGGAGGCCAAAGGGCTGTAATCACCCCCTGTACCCACTGGCAACTTTGCCCACCAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | TGTTACTGGGCAACCGGGATCTCAGCAGGTTCTGGGTaGAGCCTCTGCAGCTCTCTCCAGGGGATGGGGATG | + |
Preference number: 3 (lower is better) Translates to: CYWATGISAGSG*SLCSSLQGMGM Trigger: CATCCCCATCCCCTGGAGAGAGCTGCAGAGGCTTCACCCAGAACCTGCTGAGATCCCGGTTGCCCAGTAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CAA 90 bp | AAGGTGGGGGAGGAGGGCAGTGGAGGGTCCTCGTTCCAAAGTGTCCAACCAGATAGGACCAACAGGGCCTaGCATCCTCTGCTGTCTGTT | + |
Preference number: 3 (lower is better) Translates to: KVGEEGSGGSSFQSVQPDRTNRA*HPLLSV Trigger: AACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCT...ATCTGGTTGGACACTTTGGAACGAGGACCCTCCACTGCCCTCCTCCCCCACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | CCCTACATTGATGTGAGATACTGGTCCCTATCCAGGTaGCTGAGGGGACACCCATCCAGGGCAGGGCACTCT | + |
Preference number: 3 (lower is better) Translates to: PYIDVRYWSLSR*LRGHPSRAGHS Trigger: AGAGTGCCCTGCCCTGGATGGGTGTCCCCTCAGCCACCTGGATAGGGACCAGTATCTCACATCAATGTAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR CCA 72 bp | GCAACTCAGGGCCGCAGCTGTCTTGTTGGATGTGCTTaGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACA | + |
Preference number: 3 (lower is better) Translates to: ATQGRSCLVGCA*GDSRRLSGGST Trigger: TGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAAGCACATCCAACAAGACAGCTGCGGCCCTGAGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CAA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGAGCCGCAGCTGTCTTGTaGGATGTGCTTGGGGAGACA | + |
Preference number: 3 (lower is better) Translates to: RINQMVRIPCSVLSPGLRAAAVL*DVLGET Trigger: TGTCTCCCCAAGCACATCCAACAAGACAGCTGCGGC...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | GCCCAGTGCAGCTTAGAGTCCCCCAGGTCTAAGTTCTaGATCCAGCTGTCACCCAGCAACAACCGGTGTCCT | + |
Preference number: 3 (lower is better) Translates to: AQCSLESPRSKF*IQLSPSNNRCP Trigger: AGGACACCGGTTGTTGCTGGGTGACAGCTGGATTCAGAACTTAGACCTGGGGGACTCTAAGCTGCACTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR GCA 72 bp | AGGGAAGGCCGGCGTGTAGACAGGCTGAGGAGGGATTaGCCCTTCAAAGTCCTGAAACTGACAGGCAATGGA | + |
Preference number: 3 (lower is better) Translates to: REGRRVDRLRRD*PFKVLKLTGNG Trigger: TCCATTGCCTGTCAGTTTCAGGACTTTGAAGGGGCAATCCCTCCTCAGCCTGTCTACACGCCGGCCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR GCA 72 bp | TCCTCGTTCCAAAGTGTCCAACCAGATGACTTCACATaGTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCT | + |
Preference number: 3 (lower is better) Translates to: SSFQSVQPDDFT*SLLAAQPGKES Trigger: AGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGTGAAGTCATCTGGTTGGACACTTTGGAACGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CAA 90 bp | GGTGATATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATGGAGCATAGGGGATTaGAGGGTCAAAGGCTACCTC | + |
Preference number: 3 (lower is better) Translates to: GDMVAKPPGSAWEASPHSWSIGD*RVKGYL Trigger: GAGGTAGCCTTTGACCCTCAAATCCCCTATGCTCCA...TGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCATATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CAA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGTGCTGGTGGGCAAAGTaGCCAGTGGGTACAGGGGGT | + |
Preference number: 3 (lower is better) Translates to: QPVSSQKTLDLALGLMSLCWWAK*PVGTGG Trigger: ACCCCCTGTACCCACTGGCAACTTTGCCCACCAGCA...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR-3UTR CAA 90 bp | GGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTACAGGGAAGAGCACTTaGGAGGGACTCAGAGGGCCT | + |
Preference number: 3 (lower is better) Translates to: GTLSVWAFPLTSSGCQGVTGKST*EGLRGP Trigger: AGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGT...AACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | TGCCTCTGTTTTAGATGTTCTCAGGACAGGCTAGAGTaGCCCAGCAGGTCCTGTCTCAGGCATGGAGGGGGT | + |
Preference number: 3 (lower is better) Translates to: CLCFRCSQDRLE*PSRSCLRHGGG Trigger: ACCCCCTCCATGCCTGAGACAGGACCTGCTGGGTCACTCTAGCCTGTCCTGAGAACATCTAAAACAGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 72 bp | TGCCGTGTAGTTGCTCTCAAAATGGAAATGCAGATCTaGAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTG | + |
Preference number: 3 (lower is better) Translates to: CRVVALKMEMQI*SPEASLGHASL Trigger: CAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATCTGCATTTCCATTTTGAGAGCAACTACACGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | AGTTGCCAGTGGGTACAGGGGGTGATTACAGCCCTTTaGCCTCCAGGGTTTTGGTCCCTAGCTGTTAGGGTA | + |
Preference number: 3 (lower is better) Translates to: SCQWVQGVITAL*PPGFWSLAVRV Trigger: TACCCTAACAGCTAGGGACCAAAACCCTGGAGGCCAAAGGGCTGTAATCACCCCCTGTACCCACTGGCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | GAGGACCAACAGGGCCTTGCATCCTCTGCTGTCTGTTaGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTC | + |
Preference number: 3 (lower is better) Translates to: EDQQGLASSAVC*NSVCLGFSSHL Trigger: GAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | AAAGTGTCCAACCAGATGACTTCACATGCTCGCTGCTaGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATC | + |
Preference number: 3 (lower is better) Translates to: KVSNQMTSHARC*RLSQGRSLFSI Trigger: GATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGTGAAGTCATCTGGTTGGACACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | GATCTGCAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCGCTATGTTGTGCTGTTaGATCCTAGACAAGTTAATG | + |
Preference number: 3 (lower is better) Translates to: DLQPRGESRPCFPDMGCSAMLCC*ILDKLM Trigger: CATTAACTTGTCTAGGATCAAACAGCACAACATAGC...GCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | CACAGGGAAGAGCACTTTGGAGGGACTCAGAGGGCCTaGGCCTGCTATGTTGTGCTGTTTGATCCTAGACAA | + |
Preference number: 3 (lower is better) Translates to: HREEHFGGTQRA*ACYVVLFDPRQ Trigger: TTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | TGCACAGGTATAAGCAGGGCTCAAGGACAGGCAGTGTaGTTCACAGGGAAGAGCACTTTGGAGGGACTCAGA | + |
Preference number: 3 (lower is better) Translates to: CTGISRAQGQAV*FTGKSTLEGLR Trigger: TCTGAGTCCCTCCAAAGTGCTCTTCCCTGTGAACCACACTGCCTGTCCTTGAGCCCTGCTTATACCTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | CCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCTGCTGGTGGGCAAAGTaGCCAGTGGGTACAGGGGGT | + |
Preference number: 3 (lower is better) Translates to: PAMLCCLILDKLMALSVLCWWAK*PVGTGG Trigger: ACCCCCTGTACCCACTGGCAACTTTGCCCACCAGCA...GAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTCAGGCTGTCAAGGTGTaGGGGTGTCCCCAGAAGATA | + |
Preference number: 3 (lower is better) Translates to: AVPGWPINTGQVTLPLILQAVKV*GCPQKI Trigger: TATCTTCTGGGGACACCCCAACACCTTGACAGCCTG...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 72 bp | TTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTaGTGTTTGATCCTAGACAAGTTAATGGCCCTCTCT | + |
Preference number: 3 (lower is better) Translates to: LEGLRGPGPAML*CLILDKLMALS Trigger: AGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | AGAGGTGATATGGTGGCTAAGCCACCAGGCTCTGCCTaGGAAGCATCCCCTCATTCATTGTGCCTCTGTTTT | + |
Preference number: 3 (lower is better) Translates to: RGDMVAKPPGSA*EASPHSLCLCF Trigger: AAAACAGAGGCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCATATCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | TTGCATCCTCTGCTGTCTGTTGGAACTCTGTCTGTCTaGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGT | + |
Preference number: 3 (lower is better) Translates to: LHPLLSVGTLSV*AFPLTSSGCQG Trigger: ACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTACAGGGAAGAGCACTTaGGAGGGACTCAGAGGGCCT | + |
Preference number: 3 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCTGKST*EGLRGP Trigger: AGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGT...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTAGAGCAGGTGGGGACTaGGGAAATAGAGAGGCAGCC | + |
Preference number: 3 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCRAGGD*GNREAA Trigger: GGCTGCCTCTCTATTTCCCAAGTCCCCACCTGCTCT...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTAGGACCAACAGGGCCTaGCATCCTCTGCTGTCTGTT | + |
Preference number: 3 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCRTNRA*HPLLSV Trigger: AACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCT...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCCTGGGGCTGATGTCATaGGTTGTTACTGGGCAACCG | + |
Preference number: 3 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGLGLMS*VVTGQP Trigger: CGGTTGCCCAGTAACAACCAATGACATCAGCCCCAG...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | CGCACTCACACATACAGAGCATCTCGTGTTACTTATGTACAAAATAGGGCAAGGAGGGCCGCAGCTGTCTaGTTGGATGTGCTTGGGGAG | + |
Preference number: 3 (lower is better) Translates to: RTHTYRASRVTYVQNRARRAAAV*LDVLGE Trigger: CTCCCCAAGCACATCCAACAAGACAGCTGCGGCCCT...CCTTGCCCTATTTTGTACATAAGTAACACGAGATGCTCTGTATGTGTGAGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | CACCCAGCAACAACCGGTGTCCTCACAAAAGACACTTaGCCTAGCACTGGGGCTGATGTCATTGGTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: HPATTGVLTKDT*PSTGADVIGCY Trigger: GTAACAACCAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTGTTGCTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | GTCTTGTTGGATGTGCTTGGGGAGACAGCAGAAGATTaGGTGGGGGCTCCACATGCTCAGAGAATGTTCACA | + |
Preference number: 3 (lower is better) Translates to: VLLDVLGETAED*VGAPHAQRMFT Trigger: TGTGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAAGCACATCCAACAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 72 bp | TGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATaGTCAGAGAATGTTCACAGCACAATAGATGAGAGC | + |
Preference number: 3 (lower is better) Translates to: WGDSRRLSGGST*SENVHSTIDES Trigger: GCTCTCATCTATTGTGCTGTGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
||
3UTR TCA 72 bp | CTCCACATGCTCAGAGAATGTTCACAGCACAATAGATaGGAGCAGGTGGGGACTTGGGAAATAGAGAGGCAG | + |
Preference number: 3 (lower is better) Translates to: LHMLRECSQHNR*EQVGTWEIERQ Trigger: CTGCCTCTCTATTTCCCAAGTCCCCACCTGCTCTCATCTATTGTGCTGTGAACATTCTCTGAGCATGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR TCA 72 bp | CTAGTAGATAGGAATTCAGTTTGCAAGGGAAGGGAGTaGCCACCGGGTCCTGGAGAAGAGAAGGACAGTCAA | + |
Preference number: 3 (lower is better) Translates to: LVDRNSVCKGRE*PPGPGEEKDSQ Trigger: TTGACTGTCCTTCTCTTCTCCAGGACCCGGTGGTCACTCCCTTCCCTTGCAAACTGAATTCCTATCTACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 72 bp | GAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTaGTATGTTGTGCTGTTTGATCCTAGACAAGTTAAT | + |
Preference number: 3 (lower is better) Translates to: EEHFGGTQRAWA*YVVLFDPRQVN Trigger: ATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CCA 72 bp | TTCACATGTAACTGTGGTAAGATGACCCTTGGGACATaGGAGTGGCCACTCCATGCCTCACAGATAGGAGAT | + |
Preference number: 3 (lower is better) Translates to: FTCNCGKMTLGT*EWPLHASQIGD Trigger: ATCTCCTATCTGTGAGGCATGGAGTGGCCACTCCCATGTCCCAAGGGTCATCTTACCACAGTTACATGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGGCATCCCCTCATTCATaGTGCCTCTGTTTTAGATGT | + |
Preference number: 3 (lower is better) Translates to: QPVSSQKTLDLALGLMSLASPHS*CLCFRC Trigger: ACATCTAAAACAGAGGCACAATGAATGAGGGGATGC...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTTCTTGTTGGATGTGCTaGGGGAGACAGCAGAAGATT | + |
Preference number: 3 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCSCWMC*GRQQKI Trigger: AATCTTCTGCTGTCTCCCCAAGCACATCCAACAAGA...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR GCA 72 bp | AGTGAGCAGGCAGTTTCTGCTACATCCTTCCTAAGATaGTGTCTTCCCAAGGCCTCCTCTAAATCAATAGCA | + |
Preference number: 3 (lower is better) Translates to: SEQAVSATSFLR*CLPKASSKSIA Trigger: TGCTATTGATTTAGAGGAGGCCTTGGGAAGACAGCATCTTAGGAAGGATGTAGCAGAAACTGCCTGCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR-3UTR CAA 90 bp | GGTGTCCCCAGAAGATATTTTGGTACCCTGTGTGAAAGCACGTGTCCTCTCAAGGCTATGTTGTGCTGTTaGATCCTAGACAAGTTAATG | + |
Preference number: 3 (lower is better) Translates to: GVPRRYFGTLCESTCPLKAMLCC*ILDKLM Trigger: CATTAACTTGTCTAGGATCAAACAGCACAACATAGC...CTTGAGAGGACACGTGCTTTCACACAGGGTACCAAAATATCTTCTGGGGACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGGATGGTGTCCCGGTCTaGGCGGATGCGCGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: GESRPCFPDMGCSLSCVTDGVPV*ADARLL Trigger: CAGGAGGCGCGCATCCGCGCAGACCGGGACACCATC...CGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GATCTGCAGCCCAGAGGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCGGGCTGGGAGCTCCTaGTCGATGCGCTCGATGCGG | + |
Preference number: 4 (lower is better) Translates to: DLQPRGESRPCFPDMGCSRAGSS*SMRSMR Trigger: CCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCG...GCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCCTCTGGGCTGCAGATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | CCCGAGGTAGGCCTGGAGCATAGGGGATTTGAGGGTCAAAGGCTACCTCTACCCCGGATGCGCGCCTCCTaGTGCAGCGCCGTCTGGCGC | + |
Preference number: 4 (lower is better) Translates to: PEVGLEHRGFEGQRLPLPRMRAS*CSAVWR Trigger: GCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCG...GGGTAGAGGTAGCCTTTGACCCTCAAATCCCCTATGCTCCAGGCCTACCTCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GGAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTGCAGGGCGCTCAGGCTaGGCTGCGGACCCGAGCCAC | + |
Preference number: 4 (lower is better) Translates to: GRALWRDSEGLGLLCCAVAGRSG*AADPSH Trigger: GTGGCTCGGGTCCGCAGCGCAGCCTGAGCGCCCTGC...AACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | AAGGTGGGGGAGGAGGGCAGTGGAGGGTCCTCGTTCCAAAGTGTCCAACCAGATGCCGTCTGGCGCAGCTaGTCCGCGGTGCTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: KVGEEGSGGSSFQSVQPDAVWRS*SAVLCS Trigger: GCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGC...ATCTGGTTGGACACTTTGGAACGAGGACCCTCCACTGCCCTCCTCCCCCACCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | CTCTTGGGGAAGTTGGTAGGGACTAGGAGAAAGCGAGGCCCAGAGAGGGTAGGTCGGATGCGCGCCTCCTaGTGCAGCGCCGTCTGGCGC | + |
Preference number: 4 (lower is better) Translates to: LLGKLVGTRRKRGPERVGRMRAS*CSAVWR Trigger: GCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCG...ACCTACCCTCTCTGGGCCTCGCTTTCTCCTAGTCCCTACCAACTTCCCCAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | TTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTGGCCAGATGTTCCCACGGGCTaGGAGCTCCTGCTCGATGCG | + |
Preference number: 4 (lower is better) Translates to: FPDMGCSLSCVTSRAEWPDVPTG*ELLLDA Trigger: CGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATC...TGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GGTGATATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCAGCCGTCTGGCGCAGCTaGTCCGCGGTGCTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: GDMVAKPPGSAWEASPHSAVWRS*SAVLCS Trigger: GCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGC...TGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCATATCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCCTCTGTATGCGCGCCTCCTGCTaGAGCGCCGTCTGGCGCAGC | + |
Preference number: 4 (lower is better) Translates to: AKPPGSAWEASPHSLCLCMRASC*SAVWRS Trigger: GCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCAT...ACAGAGGCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GTTGGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTCCCGGTCTGCGCGGATaGGCGCCTCCTGCTGCAGCG | + |
Preference number: 4 (lower is better) Translates to: VGTLSVWAFPLTSSGCQGPGLRG*APPAAA Trigger: CGCTGCAGCAGGAGGCGCGCATCCGCGCAGACCGGG...ACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGTTCCCGGTCTGCGCGGATaGGCGCCTCCTGCTGCAGCG | + |
Preference number: 4 (lower is better) Translates to: GTLSVWAFPLTSSGCQGVPGLRG*APPAAA Trigger: CGCTGCAGCAGGAGGCGCGCATCCGCGCAGACCGGG...AACACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTTTGCTGCAGCGCCGTCTaGCGCAGCTGCTCCGCGGTG | + |
Preference number: 4 (lower is better) Translates to: EEHFGGTQRAWACYVVLFCCSAV*RSCSAV Trigger: CACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCA...AAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | ATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCGAGAAGGGGGTGCCCTaGCCGGAGCCACCTGACCTG | + |
Preference number: 4 (lower is better) Translates to: MVAKPPGSAWEASPHSLCEKGVP*PEPPDL Trigger: CAGGTCAGGTGGCTCCGGCCAGGGCACCCCCTTCTC...GCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTGGCCATGGAGCCGGTGTCAGAGCGTaGTCCCACAGGTTGAACTGT | + |
Preference number: 4 (lower is better) Translates to: LTWAAASPASRLGLSGHGAGVRA*SHRLNC Trigger: ACAGTTCAACCTGTGGGACCACGCTCTGACACCGGC...TCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCAGCAGGGCGCTCAGGCTaGGCTGCGGACCCGAGCCAC | + |
Preference number: 4 (lower is better) Translates to: LGRQQKIEWGLHMLRECSAGRSG*AADPSH Trigger: GTGGCTCGGGTCCGCAGCGCAGCCTGAGCGCCCTGC...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCAGAGCCGCCTGCGCTGTaGAGGGCGCTCAGGCTGCGC | + |
Preference number: 4 (lower is better) Translates to: LGRQQKIEWGLHMLRECSEPPAL*RALRLR Trigger: GCGCAGCCTGAGCGCCCTGCACAGCGCAGGCGGCTC...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGAGATGGTGTCCCGGTCTaGGCGGATGCGCGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: RINQMVRIPCSVLSPGLRDGVPV*ADARLL Trigger: CAGGAGGCGCGCATCCGCGCAGACCGGGACACCATC...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTATGCGCGCCTCCTGCTaGAGCGCCGTCTGGCGCAGC | + |
Preference number: 4 (lower is better) Translates to: AVPGWPINTGQVTLPLILMRASC*SAVWRS Trigger: GCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCAT...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | TTGGGGAGACAGCAGAAGATTGAGTGGGGGCTCCACATGCTCAGAGAATGTTCATGCTGCAGCGCCGTCTaGCGCAGCTGCTCCGCGGTG | + |
Preference number: 4 (lower is better) Translates to: LGRQQKIEWGLHMLRECSCCSAV*RSCSAV Trigger: CACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCA...TGAACATTCTCTGAGCATGTGGAGCCCCCACTCAATCTTCTGCTGTCTCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCGAGCCGCCTGCGCTGTaGAGGGCGCTCAGGCTGCGC | + |
Preference number: 4 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGEPPAL*RALRLR Trigger: GCGCAGCCTGAGCGCCCTGCACAGCGCAGGCGGCTC...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GGAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTGATCAGCAGCTCCATTaGCTCAAGGCCGGCCTCCAG | + |
Preference number: 4 (lower is better) Translates to: GRALWRDSEGLGLLCCAVDQQLH*LKAGLQ Trigger: CTGGAGGCCGGCCTTGAGCCAATGGAGCTGCTGATC...AACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCCTCTGTAGGCTCAGGGGCAGCTaGGCCACCTTGTCGTTGATC | + |
Preference number: 4 (lower is better) Translates to: AKPPGSAWEASPHSLCLCRLRGS*ATLSLI Trigger: GATCAACGACAAGGTGGCCCAGCTGCCCCTGAGCCT...ACAGAGGCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | AAGGTGGGGGAGGAGGGCAGTGGAGGGTCCTCGTTCCAAAGTGTCCAACCAGATGATAAGGATGCCGTGTaGCTTGATGGGGTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: KVGEEGSGGSSFQSVQPDDKDAV*LDGVPG Trigger: GCCTGGCACCCCATCAAGCCACACGGCATCCTTATC...ATCTGGTTGGACACTTTGGAACGAGGACCCTCCACTGCCCTCCTCCCCCACCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGGTGGCCCGGTGCAGTTaGCCATGCCCAGCACCTGGG | + |
Preference number: 4 (lower is better) Translates to: QPVSSQKTLDLALGLMSLVARCS*PCPAPG Trigger: CCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCAC...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR TCA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGTACAGAGGAAGCGACTaGGCAGCGGCACGGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRYRGSD*AAARAA Trigger: CGCCGCCCGTGCCGCTGCTCAGTCGCTTCCTCTGTA...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CAACACTGGGCAAGTTACTTTACCTCTCATCCTTCTCTTGTGCACCACAGGGCTGAGAAGGGGGTGCCCTaGCCGGAGCCACCTGACCTG | + |
Preference number: 4 (lower is better) Translates to: QHWASYFTSHPSLVHHRAEKGVP*PEPPDL Trigger: CAGGTCAGGTGGCTCCGGCCAGGGCACCCCCTTCTC...AGCCCTGTGGTGCACAAGAGAAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCCTCTGTCGCAGTTCTCCGTCCTaGTATGCAGACCACAGCCCA | + |
Preference number: 4 (lower is better) Translates to: AKPPGSAWEASPHSLCLCRSSPS*YADHSP Trigger: TGGGCTGTGGTCTGCATACCAGGACGGAGAACTGCG...ACAGAGGCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GGTGATATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCAGACATTGCCCATCAGTaGCCCGGTGCAGTTGGCCAT | + |
Preference number: 4 (lower is better) Translates to: GDMVAKPPGSAWEASPHSDIAHQ*PGAVGH Trigger: ATGGCCAACTGCACCGGGCCACTGATGGGCAATGTC...TGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCATATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | CAAGGACAGGCAGTGTGGTTCACAGGGAAGAGCACTTaGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTG | + |
Preference number: 4 (lower is better) Translates to: QGQAVWFTGKST*EGLRGPGPAML Trigger: CAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCCCTGTGAACCACACTGCCTGTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR TCA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTTACAGAGGAAGCGACTaGGCAGCGGCACGGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCYRGSD*AAARAA Trigger: CGCCGCCCGTGCCGCTGCTCAGTCGCTTCCTCTGTA...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTGCAGCTGCTCCGCGGTaGTCTGCAGCAGCAACAGCT | + |
Preference number: 4 (lower is better) Translates to: AVPGWPINTGQVTLPLILAAAPR*SAAATA Trigger: AGCTGTTGCTGCTGCAGAGCACCGCGGAGCAGCTGC...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GTTGGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTGATCAGCAGCTCCATTaGCTCAAGGCCGGCCTCCAG | + |
Preference number: 4 (lower is better) Translates to: VGTLSVWAFPLTSSGCQGDQQLH*LKAGLQ Trigger: CTGGAGGCCGGCCTTGAGCCAATGGAGCTGCTGATC...ACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | ACCCCCAACAGATCCTCATACTTCAGTCTGTGGTCCCCATTCACATGTAACTGTGTGGCCCGGTGCAGTTaGCCATGCCCAGCACCTGGG | + |
Preference number: 4 (lower is better) Translates to: TPNRSSYFSLWSPFTCNCVARCS*PCPAPG Trigger: CCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCAC...ACAGTTACATGTGAATGGGGACCACAGACTGAAGTATGAGGATCTGTTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGAGACATTGCCCATCAGTaGCCCGGTGCAGTTGGCCAT | + |
Preference number: 4 (lower is better) Translates to: RINQMVRIPCSVLSPGLRDIAHQ*PGAVGH Trigger: ATGGCCAACTGCACCGGGCCACTGATGGGCAATGTC...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | AAGGGAAGGCCGGCGTGTAGACAGGCTGAGGAGGGATaGCCCCTTCAAAGTCCTGAAACTGACAGGCAATGG | + |
Preference number: 4 (lower is better) Translates to: KGRPACRQAEEG*PLQSPETDRQW Trigger: CCATTGCCTGTCAGTTTCAGGACTTTGAAGGGGCAATCCCTCCTCAGCCTGTCTACACGCCGGCCTTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCCGGAGCCACCTGACCTaGAGCGCAGCCACATGCAGG | + |
Preference number: 4 (lower is better) Translates to: PAMLCCLILDKLMALSVLRSHLT*SAATCR Trigger: CCTGCATGTGGCTGCGCTCCAGGTCAGGTGGCTCCG...GAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCCGGAGCCACCTGACCTaGAGCGCAGCCACATGCAGG | + |
Preference number: 4 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGRSHLT*SAATCR Trigger: CCTGCATGTGGCTGCGCTCCAGGTCAGGTGGCTCCG...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GTTGGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCTCCTCAGGCTGTCAAGGTCGCAGTTCTCCGTCCTaGTATGCAGACCACAGCCCA | + |
Preference number: 4 (lower is better) Translates to: VGTLSVWAFPLTSSGCQGRSSPS*YADHSP Trigger: TGGGCTGTGGTCTGCATACCAGGACGGAGAACTGCG...ACCTTGACAGCCTGAGGAGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR GCA 90 bp | CGCACTCACACATACAGAGCATCTCGTGTTACTTATGTACAAAATAGGGCAAGGCGGGCTGGGAGCTCCTaGTCGATGCGCTCGATGCGG | + |
Preference number: 4 (lower is better) Translates to: RTHTYRASRVTYVQNRARRAGSS*SMRSMR Trigger: CCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCG...CCTTGCCCTATTTTGTACATAAGTAACACGAGATGCTCTGTATGTGTGAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCGATGTTCCCACGGGCTaGGAGCTCCTGCTCGATGCG | + |
Preference number: 4 (lower is better) Translates to: PAMLCCLILDKLMALSVLDVPTG*ELLLDA Trigger: CGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATC...GAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CAACCGGTGTCCTCACAAAAGACACTTGACCTAGCACTGGGGCTGATGTCATTGGCCGGTGTCAGAGCGTaGTCCCACAGGTTGAACTGT | + |
Preference number: 4 (lower is better) Translates to: QPVSSQKTLDLALGLMSLAGVRA*SHRLNC Trigger: ACAGTTCAACCTGTGGGACCACGCTCTGACACCGGC...CAATGACATCAGCCCCAGTGCTAGGTCAAGTGTCTTTTGTGAGGACACCGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | AGAGGACCAACAGGGCCTTGCATCCTCTGCTGTCTGTaGGAACTCTGTCTGTCTGGGCTTTTCCTCTCACCT | + |
Preference number: 4 (lower is better) Translates to: RGPTGPCILCCL*ELCLSGLFLSP Trigger: AGGTGAGAGGAAAAGCCCAGACAGACAGAGTTCCAACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCAGGCTCAGGGGCAGCTaGGCCACCTTGTCGTTGATC | + |
Preference number: 4 (lower is better) Translates to: PAMLCCLILDKLMALSVLRLRGS*ATLSLI Trigger: GATCAACGACAAGGTGGCCCAGCTGCCCCTGAGCCT...GAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCCTCTGTCAGGAGATGCAGATATaGTGCCAGTTGCTGTCTTTC | + |
Preference number: 4 (lower is better) Translates to: AKPPGSAWEASPHSLCLCQEMQI*CQLLSF Trigger: GAAAGACAGCAACTGGCACCATATCTGCATCTCCTG...ACAGAGGCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | GGTGTCCCCAGAAGATATTTTGGTACCCTGTGTGAAAGCACGTGTCCTCTCAAGGATAAGGATGCCGTGTaGCTTGATGGGGTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: GVPRRYFGTLCESTCPLKDKDAV*LDGVPG Trigger: GCCTGGCACCCCATCAAGCCACACGGCATCCTTATC...CTTGAGAGGACACGTGCTTTCACACAGGGTACCAAAATATCTTCTGGGGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | CCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATaGTGCCTCTGTTTTAGATGTTCTCAGGACAGGCTA | + |
Preference number: 4 (lower is better) Translates to: PPGSAWEASPHS*CLCFRCSQDRL Trigger: TAGCCTGTCCTGAGAACATCTAAAACAGAGGCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | ACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTaGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTC | + |
Preference number: 4 (lower is better) Translates to: TLEGLRGPGPAM*CCLILDKLMAL Trigger: GAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | TACTGTTCCAATCCATGGGAGAGGACCAACAGGGCCTaGCATCCTCTGCTGTCTGTTGGAACTCTGTCTGTC | + |
Preference number: 4 (lower is better) Translates to: YCSNPWERTNRA*HPLLSVGTLSV Trigger: GACAGACAGAGTTCCAACAGACAGCAGAGGATGCAAGGCCCTGTTGGTCCTCTCCCATGGATTGGAACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | GAAGAGAAGGACAGTCAAGGGAACTTCCAGGGTCATTaGAGCTTCCTGGCCAGACCTCAGCTCCCTCATCTA | + |
Preference number: 4 (lower is better) Translates to: EEKDSQGNFQGH*SFLARPQLPHL Trigger: TAGATGAGGGAGCTGAGGTCTGGCCAGGAAGCTCAAATGACCCTGGAAGTTCCCTTGACTGTCCTTCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCCTAGTTCGTCCATCTTaGAGTGCAGGGCGGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: PAMLCCLILDKLMALSVLLVRPS*SAGRWA Trigger: TGCCCACCGCCCTGCACTCCAAGATGGACGAACTAG...GAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | GGCTGTCAAGGTGTTGGGGTGTCCCCAGAAGATATTTaGGTACCCTGTGTGAAAGCACGTGTCCTCTCAAGT | + |
Preference number: 4 (lower is better) Translates to: GCQGVGVSPEDI*VPCVKARVLSS Trigger: ACTTGAGAGGACACGTGCTTTCACACAGGGTACCAAAATATCTTCTGGGGACACCCCAACACCTTGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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3UTR CAA 72 bp | TCTCTTGTGCACCACAGGGCTAAGAACAGTCTCGCTTaGTGCTGTGAGGATAAACCAGATGGTGCGGATACC | + |
Preference number: 4 (lower is better) Translates to: SLVHHRAKNSLA*CCEDKPDGADT Trigger: GGTATCCGCACCATCTGGTTTATCCTCACAGCACAAAGCGAGACTGTTCTTAGCCCTGTGGTGCACAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CCA 90 bp | CCTGCTATGTTGTGCTGTTTGATCCTAGACAAGTTAATGGCCCTCTCTGTGCTCCAGGAGATGCAGATATaGTGCCAGTTGCTGTCTTTC | + |
Preference number: 4 (lower is better) Translates to: PAMLCCLILDKLMALSVLQEMQI*CQLLSF Trigger: GAAAGACAGCAACTGGCACCATATCTGCATCTCCTG...GAGCACAGAGAGGGCCATTAACTTGTCTAGGATCAAACAGCACAACATAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CCA 90 bp | TCCCAGGCGCCGTCGGCCATGGTGTCGCGGCGGGGCCCGGCGTCCTaGAGGCCGCGCGGCAGGCCGCTCTCACAGCGGCCCAGCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: SQAPSAMVSRRGPAS*RPRGRPLSQRPSLP Trigger: CGGCAAGCTGGGCCGCTGTGAGAGCGGCCTGCCGCGCGGCCTCCAGGACGCCGGGCCCCGCCGCGACACCATGGCCGACGGCGCCTGGGA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS TCA 90 bp | CCCCCGACGGGCAGGCGGCGGCCAGCGGCGTACAGAGGAAGCGACTaGGCAGCGGCACGGGCGGCGGCGGGAAGACGCTGGCCGCGGGCT | + |
Preference number: 5 (lower is better) Translates to: PPTGRRRPAAYRGSD*AAARAAAGRRWPRA Trigger: AGCCCGCGGCCAGCGTCTTCCCGCCGCCGCCCGTGCCGCTGCTCAGTCGCTTCCTCTGTACGCCGCTGGCCGCCGCCTGCCCGTCGGGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CCA 90 bp | CCAGCTCCAGCAGCAGCGCAGGTGAGTCCCAGGCGCCGTCGGCCATaGTGTCGCGGCGGGGCCCGGCGTCCTGGAGGCCGCGCGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: PAPAAAQVSPRRRRP*CRGGARRPGGRAAG Trigger: GCCTGCCGCGCGGCCTCCAGGACGCCGGGCCCCGCCGCGACACCATGGCCGACGGCGCCTGGGACTCACCTGCGCTGCTGCTGGAGCTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | CTCTGCAGCAGCAACAGCTCTGCGCGCTCGCCTGCCGCGTCCCCCTaGTCGGCCCCCGACGGGCAGGCGGCGGCCAGCGGCGTACAGAGG | + |
Preference number: 5 (lower is better) Translates to: LCSSNSSARSPAASP*SAPDGQAAASGVQR Trigger: CCTCTGTACGCCGCTGGCCGCCGCCTGCCCGTCGGGGGCCGAGCAGGGGGACGCGGCAGGCGAGCGCGCAGAGCTGTTGCTGCTGCAGAG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | GCCTCCTGCTGCAGCGCCGTCTGGCGCAGCTGCTCCGCGGTGCTCTaGAGCAGCAACAGCTCTGCGCGCTCGCCTGCCGCGTCCCCCTGC | + |
Preference number: 5 (lower is better) Translates to: ASCCSAVWRSCSAVL*SSNSSARSPAASPC Trigger: GCAGGGGGACGCGGCAGGCGAGCGCGCAGAGCTGTTGCTGCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | TGCGCGCCTCCTGCTGCAGCGCCGTCTGGCGCAGCTGCTCCGCGGTaGTCTGCAGCAGCAACAGCTCTGCGCGCTCGCCTGCCGCGTCCC | + |
Preference number: 5 (lower is better) Translates to: CAPPAAAPSGAAAPR*SAAATALRARLPRP Trigger: GGGACGCGGCAGGCGAGCGCGCAGAGCTGTTGCTGCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | TCTGCGCGGATGCGCGCCTCCTGCTGCAGCGCCGTCTGGCGCAGCTaGTCCGCGGTGCTCTGCAGCAGCAACAGCTCTGCGCGCTCGCCT | + |
Preference number: 5 (lower is better) Translates to: SARMRASCCSAVWRS*SAVLCSSNSSARSP Trigger: AGGCGAGCGCGCAGAGCTGTTGCTGCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCAGA 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | GCTGGAGCTGGCGCCGAGGAGATGTTCCCACGGGCTGGGAGCTCCTaGTCGATGCGCTCGATGCGGTCTCGCAGCGCGCGCACCGCGTCC | + |
Preference number: 5 (lower is better) Translates to: AGAGAEEMFPRAGSS*SMRSMRSRSARTAS Trigger: GGACGCGGTGCGCGCGCTGCGAGACCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATCTCCTCGGCGCCAGCTCCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CCA 90 bp | GTGTCCCGGTCTGCGCGGATGCGCGCCTCCTGCTGCAGCGCCGTCTaGCGCAGCTGCTCCGCGGTGCTCTGCAGCAGCAACAGCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: VSRSARMRASCCSAV*RSCSAVLCSSNSSA Trigger: CGCAGAGCTGTTGCTGCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCAGACCGGGACAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | CTGGCGCCGAGGAGATGTTCCCACGGGCTGGGAGCTCCTGCTCGATaGGCTCGATGCGGTCTCGCAGCGCGCGCACCGCGTCCTCCAGCT | + |
Preference number: 5 (lower is better) Translates to: LAPRRCSHGLGAPAR*ARCGLAARAPRPPA Trigger: AGCTGGAGGACGCGGTGCGCGCGCTGCGAGACCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATCTCCTCGGCGCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS TCA 90 bp | GCATTCAGCTCCTTCTCCACTTCCTGTCGTTGCTGGTGGCTCCCGTaGCTGAGGGCGGCTCGCTCCTTCTCCAGCGCCAGCACCTTGGCC | + |
Preference number: 5 (lower is better) Translates to: AFSSFSTSCRCWWLP*LRAARSFSSASTLA Trigger: GGCCAAGGTGCTGGCGCTGGAGAAGGAGCGAGCCGCCCTCAGTCACGGGAGCCACCAGCAACGACAGGAAGTGGAGAAGGAGCTGAATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | CCAGCTTATCTTCCCAGGGGAGGACATTGCCCATCAGTGGCCCGGTaGAGTTGGCCATGCCCAGCACCTGGGCCGGTGTCAGAGCGTGGT | + |
Preference number: 5 (lower is better) Translates to: PAYLPRGGHCPSVAR*SWPCPAPGPVSERG Trigger: ACCACGCTCTGACACCGGCCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGAAGATAAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | CTGACATGGGCTGCAGCCTCTCCTGCGTCACGTCTCGGGCTGAGTGGCCATGGAAGGATGCCGTGTGGCTaGATGGGGTGCCAGGCTGCT | + |
Preference number: 5 (lower is better) Translates to: LTWAAASPASRLGLSGHGRMPCG*MGCQAA Trigger: AGCAGCCTGGCACCCCATCAAGCCACACGGCATCCT...TCCATGGCCACTCAGCCCGAGACGTGACGCAGGAGAGGCTGCAGCCCATGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | CACCTCCAAAGGCCTCTACCAGCTTATCTTCCCAGGGGAGGACATTaGCCATCAGTGGCCCGGTGCAGTTGGCCATGCCCAGCACCTGGG | + |
Preference number: 5 (lower is better) Translates to: HLQRPLPAYLPRGGH*PSVARCSWPCPAPG Trigger: CCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGAAGATAAGCTGGTAGAGGCCTTTGGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGCAAGGTATCCTGCTCTaGGCCCAGGATAAGGATGCC | + |
Preference number: 5 (lower is better) Translates to: GESRPCFPDMGCSLSCVTQGILL*AQDKDA Trigger: GGCATCCTTATCCTGGGCCAAGAGCAGGATACCTTG...CGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | GGCGAGTCTCGGCCATGCTTCCCTGACATGGGCTGCAGCCTCTCCTGCGTCACGGCGTGGTCCCACAGGTaGAACTGTGCAATGTCACCA | + |
Preference number: 5 (lower is better) Translates to: GESRPCFPDMGCSLSCVTAWSHR*NCAMSP Trigger: TGGTGACATTGCACAGTTCAACCTGTGGGACCACGC...CGTGACGCAGGAGAGGCTGCAGCCCATGTCAGGGAAGCATGGCCGAGACTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | CAGCACCTGGGCCGGTGTCAGAGCGTGGTCCCACAGGTTGAACTGTaGAATGTCACCAACGAAGGCCTGTGTGGCGTCAAATCGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: QHLGRCQSVVPQVEL*NVTNEGLCGVKSAS Trigger: GGAGGCCGATTTGACGCCACACAGGCCTTCGTTGGTGACATTGCACAGTTCAACCTGTGGGACCACGCTCTGACACCGGCCCAGGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | ACATGCTCGCTGCTGGCGGCTCAGCCAGGGAAGGAGTCTGTTCTCCATCCAGCATCTAGTTCGTCCATCTaGGAGTGCAGGGCGGTGGGC | + |
Preference number: 5 (lower is better) Translates to: TCSLLAAQPGKESVLHPASSSSI*ECRAVG Trigger: GCCCACCGCCCTGCACTCCAAGATGGACGAACTAGA...TGCTGGATGGAGAACAGACTCCTTCCCTGGCTGAGCCGCCAGCAGCGAGCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | GGAAGAGCACTTTGGAGGGACTCAGAGGGCCTGGGCCTGCTATGTTGTGCTGTTTCCCAGGGGAGGACATaGCCCATCAGTGGCCCGGTG | + |
Preference number: 5 (lower is better) Translates to: GRALWRDSEGLGLLCCAVSQGRT*PISGPV Trigger: CACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGA...AACAGCACAACATAGCAGGCCCAGGCCCTCTGAGTCCCTCCAAAGTGCTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS TCA 90 bp | CCATGCCCAGCACCTGGGCCGGTGTCAGAGCGTGGTCCCACAGGTTaGACTGTGCAATGTCACCAACGAAGGCCTGTGTGGCGTCAAATC | + |
Preference number: 5 (lower is better) Translates to: PCPAPGPVSERGPTG*TVQCHQRRPVWRQI Trigger: GATTTGACGCCACACAGGCCTTCGTTGGTGACATTGCACAGTTCAACCTGTGGGACCACGCTCTGACACCGGCCCAGGTGCTGGGCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 90 bp | CCAACGAAGGCCTGTGTGGCGTCAAATCGGCCTCCCAAGGTATCCTaGTCTTGGCCCAGGATAAGGATGCCGTGTGGCTTGATGGGGTGC | + |
Preference number: 5 (lower is better) Translates to: PTKACVASNRPPKVS*SWPRIRMPCGLMGC Trigger: GCACCCCATCAAGCCACACGGCATCCTTATCCTGGGCCAAGAGCAGGATACCTTGGGAGGCCGATTTGACGCCACACAGGCCTTCGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | GGTGATATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCAGGCAGCTGGGCCACCTaGTCGTTGATCAGCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: GDMVAKPPGSAWEASPHSGSWAT*SLISSS Trigger: GGAGCTGCTGATCAACGACAAGGTGGCCCAGCTGCC...TGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCATATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | CAGGCTGAGGAGGGATTGCCCCTTCAAAGTCCTGAAACTGACAGGCAATGGAGGTCCCAGGGGAGGACATaGCCCATCAGTGGCCCGGTG | + |
Preference number: 5 (lower is better) Translates to: QAEEGLPLQSPETDRQWRSQGRT*PISGPV Trigger: CACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGA...CCTCCATTGCCTGTCAGTTTCAGGACTTTGAAGGGGCAATCCCTCCTCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | ATGGTGGCTAAGCCACCAGGCTCTGCCTGGGAAGCATCCCCTCATTCATTGTGCTCTAGTTCGTCCATCTaGGAGTGCAGGGCGGTGGGC | + |
Preference number: 5 (lower is better) Translates to: MVAKPPGSAWEASPHSLCSSSSI*ECRAVG Trigger: GCCCACCGCCCTGCACTCCAAGATGGACGAACTAGA...GCACAATGAATGAGGGGATGCTTCCCAGGCAGAGCCTGGTGGCTTAGCCACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | GCTGTTCCCGGCTGGCCAATCAACACTGGGCAAGTTACTTTACCTCTCATCCTTAGTTCCGGCAGCGCCTaGCGCACGCGGGCGTACATG | + |
Preference number: 5 (lower is better) Translates to: AVPGWPINTGQVTLPLILSSGSA*RTRAYM Trigger: CATGTACGCCCGCGTGCGCAAGGCGCTGCCGGAACT...AAGGATGAGAGGTAAAGTAACTTGCCCAGTGTTGATTGGCCAGCCGGGAACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCAGTTCCGGCAGCGCCTaGCGCACGCGGGCGTACATG | + |
Preference number: 5 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGSSGSA*RTRAYM Trigger: CATGTACGCCCGCGTGCGCAAGGCGCTGCCGGAACT...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | CTCTTGGGGAAGTTGGTAGGGACTAGGAGAAAGCGAGGCCCAGAGAGGGTAGGTCAGATATGGTGCCAGTaGCTGTCTTTCAGGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: LLGKLVGTRRKRGPERVGQIWCQ*LSFRLR Trigger: CCTGAGCCTGAAAGACAGCAACTGGCACCATATCTG...ACCTACCCTCTCTGGGCCTCGCTTTCTCCTAGTCCCTACCAACTTCCCCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | AGGATAAACCAGATGGTGCGGATACCGTGCTCCGTGCTGTCTCCAGGCCTAAGACAGATATGGTGCCAGTaGCTGTCTTTCAGGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: RINQMVRIPCSVLSPGLRQIWCQ*LSFRLR Trigger: CCTGAGCCTGAAAGACAGCAACTGGCACCATATCTG...TCTTAGGCCTGGAGACAGCACGGAGCACGGTATCCGCACCATCTGGTTTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | TTACCTCTCATCCTTCTCTTGTGCACCACAGGGCTAAGAACAGTCTCGCTTTGTAGGATGCCGTGTGGCTaGATGGGGTGCCAGGCTGCT | + |
Preference number: 5 (lower is better) Translates to: LPLILLLCTTGLRTVSLCRMPCG*MGCQAA Trigger: AGCAGCCTGGCACCCCATCAAGCCACACGGCATCCT...ACAAAGCGAGACTGTTCTTAGCCCTGTGGTGCACAAGAGAAGGATGAGAGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | GAGAACCTTCTCCAGTTTTCTCTCAGGCCAAAGGTGCTGGGACTAGTAGATAGGCAAGGTATCCTGCTCTaGGCCCAGGATAAGGATGCC | + |
Preference number: 5 (lower is better) Translates to: ENLLQFSLRPKVLGLVDRQGILL*AQDKDA Trigger: GGCATCCTTATCCTGGGCCAAGAGCAGGATACCTTG...CCTATCTACTAGTCCCAGCACCTTTGGCCTGAGAGAAAACTGGAGAAGGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS-3UTR CAA 90 bp | TTTCTGACGACCTCTAAAGATACTCCTTTCTTGCCCTTAGACTGCAGCTCAGGCGCGTGGTCCCACAGGTaGAACTGTGCAATGTCACCA | + |
Preference number: 5 (lower is better) Translates to: FLTTSKDTPFLPLDCSSGAWSHR*NCAMSP Trigger: TGGTGACATTGCACAGTTCAACCTGTGGGACCACGC...GCCTGAGCTGCAGTCTAAGGGCAAGAAAGGAGTATCTTTAGAGGTCGTCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | CTCCCCGGGCAACACCGAGGGCCCGGCCGAGCCGCCTaGGCTGTGCAGGGCGCTCAGGCTGCGCTGCGGACC | + |
Preference number: 6 (lower is better) Translates to: LPGQHRGPGRAA*AVQGAQAALRT Trigger: GGTCCGCAGCGCAGCCTGAGCGCCCTGCACAGCGCAGGCGGCTCGGCCGGGCCCTCGGTGTTGCCCGGGGAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CCA 72 bp | GCAGCAGCGCAGGTGAGTCCCAGGCGCCGTCGGCCATaGTGTCGCGGCGGGGCCCGGCGTCCTGGAGGCCGC | + |
Preference number: 6 (lower is better) Translates to: AAAQVSPRRRRP*CRGGARRPGGR Trigger: GCGGCCTCCAGGACGCCGGGCCCCGCCGCGACACCATGGCCGACGGCGCCTGGGACTCACCTGCGCTGCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | CGGATGGTGTCCCGGTCTGCGCGGATGCGCGCCTCCTaGTGCAGCGCCGTCTGGCGCAGCTGCTCCGCGGTG | + |
Preference number: 6 (lower is better) Translates to: RMVSRSARMRAS*CSAVWRSCSAV Trigger: CACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCAGACCGGGACACCATCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | TGCAGCGCCGTCTGGCGCAGCTGCTCCGCGGTGCTCTaGAGCAGCAACAGCTCTGCGCGCTCGCCTGCCGCG | + |
Preference number: 6 (lower is better) Translates to: CSAVWRSCSAVL*SSNSSARSPAA Trigger: CGCGGCAGGCGAGCGCGCAGAGCTGTTGCTGCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCA 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | ATGGTGTCCCGGTCTGCGCGGATGCGCGCCTCCTGCTaGAGCGCCGTCTGGCGCAGCTGCTCCGCGGTGCTC | + |
Preference number: 6 (lower is better) Translates to: MVSRSARMRASC*SAVWRSCSAVL Trigger: GAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCAGACCGGGACACCAT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | TCCCACGGGCTGGGAGCTCCTGCTCGATGCGCTCGATaGGGTCTCGCAGCGCGCGCACCGCGTCCTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: SHGLGAPARCAR*GLAARAPRPPA Trigger: AGCTGGAGGACGCGGTGCGCGCGCTGCGAGACCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCGTGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | GGCGCCGAGGAGATGTTCCCACGGGCTGGGAGCTCCTaGTCGATGCGCTCGATGCGGTCTCGCAGCGCGCGC | + |
Preference number: 6 (lower is better) Translates to: GAEEMFPRAGSS*SMRSMRSRSAR Trigger: GCGCGCGCTGCGAGACCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATCTCCTCGGCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CCA 72 bp | TCTGCGCGGATGCGCGCCTCCTGCTGCAGCGCCGTCTaGCGCAGCTGCTCCGCGGTGCTCTGCAGCAGCAAC | + |
Preference number: 6 (lower is better) Translates to: SARMRASCCSAV*RSCSAVLCSSN Trigger: GTTGCTGCTGCAGAGCACCGCGGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCAGA 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | AGGAGATGTTCCCACGGGCTGGGAGCTCCTGCTCGATaGGCTCGATGCGGTCTCGCAGCGCGCGCACCGCGT | + |
Preference number: 6 (lower is better) Translates to: RRCSHGLGAPAR*ARCGLAARAPR Trigger: ACGCGGTGCGCGCGCTGCGAGACCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATCTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CCA 72 bp | GGCTGGAGCTGGCGCCGAGGAGATGTTCCCACGGGCTaGGAGCTCCTGCTCGATGCGCTCGATGCGGTCTCG | + |
Preference number: 6 (lower is better) Translates to: GWSWRRGDVPTG*ELLLDALDAVS Trigger: CGAGACCGCATCGAGCGCATCGAGCAGGAGCTCCCAGCCCGTGGGAACATCTCCTCGGCGCCAGCTCCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | GGACATTGCCCATCAGTGGCCCGGTGCAGTTGGCCATaGCCAGCACCTGGGCCGGTGTCAGAGCGTGGTCCC | + |
Preference number: 6 (lower is better) Translates to: GHCPSVARCSWP*PAPGPVSERGP Trigger: GGGACCACGCTCTGACACCGGCCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CAA 72 bp | CAGGGGAGGACATTGCCCATCAGTGGCCCGGTGCAGTaGGCCATGCCCAGCACCTGGGCCGGTGTCAGAGCG | + |
Preference number: 6 (lower is better) Translates to: QGRTLPISGPVQ*AMPSTWAGVRA Trigger: CGCTCTGACACCGGCCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CAA 90 bp | TTATCTTCCCAGGGGAGGACATTGCCCATCAGTGGCCCGGTGCAGTaGGCCATGCCCAGCACCTGGGCCGGTGTCAGAGCGTGGTCCCAC | + |
Preference number: 6 (lower is better) Translates to: LSSQGRTLPISGPVQ*AMPSTWAGVRAWSH Trigger: GTGGGACCACGCTCTGACACCGGCCCAGGTGCTGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGAAGATAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CAA 90 bp | GCACCTCCAAAGGCCTCTACCAGCTTATCTTCCCAGGGGAGGACATaGCCCATCAGTGGCCCGGTGCAGTTGGCCATGCCCAGCACCTGG | + |
Preference number: 6 (lower is better) Translates to: APPKASTSLSSQGRT*PISGPVQLAMPSTW Trigger: CCAGGTGCTGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGAAGATAAGCTGGTAGAGGCCTTTGGAGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS TCA 72 bp | GCACCTGGGCCGGTGTCAGAGCGTGGTCCCACAGGTTaGACTGTGCAATGTCACCAACGAAGGCCTGTGTGG | + |
Preference number: 6 (lower is better) Translates to: APGPVSERGPTG*TVQCHQRRPVW Trigger: CCACACAGGCCTTCGTTGGTGACATTGCACAGTTCAACCTGTGGGACCACGCTCTGACACCGGCCCAGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS GCA 72 bp | AGGCCTCTACCAGCTTATCTTCCCAGGGGAGGACATTaGCCATCAGTGGCCCGGTGCAGTTGGCCATGCCCA | + |
Preference number: 6 (lower is better) Translates to: RPLPAYLPRGGH*PSVARCSWPCP Trigger: TGGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGAAGATAAGCTGGTAGAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CAA 72 bp | AAGGCCTCTACCAGCTTATCTTCCCAGGGGAGGACATaGCCCATCAGTGGCCCGGTGCAGTTGGCCATGCCC | + |
Preference number: 6 (lower is better) Translates to: KASTSLSSQGRT*PISGPVQLAMP Trigger: GGGCATGGCCAACTGCACCGGGCCACTGATGGGCAATGTCCTCCCCTGGGAAGATAAGCTGGTAGAGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CAA 90 bp | GCCATGCCCAGCACCTGGGCCGGTGTCAGAGCGTGGTCCCACAGGTaGAACTGTGCAATGTCACCAACGAAGGCCTGTGTGGCGTCAAAT | + |
Preference number: 6 (lower is better) Translates to: AMPSTWAGVRAWSHR*NCAMSPTKACVASN Trigger: ATTTGACGCCACACAGGCCTTCGTTGGTGACATTGCACAGTTCAACCTGTGGGACCACGCTCTGACACCGGCCCAGGTGCTGGGCATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |
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CDS CAA 72 bp | TGTGGCGTCAAATCGGCCTCCCAAGGTATCCTGCTCTaGGCCCAGGATAAGGATGCCGTGTGGCTTGATGGG | + |
Preference number: 6 (lower is better) Translates to: CGVKSASQGILL*AQDKDAVWLDG Trigger: CCCATCAAGCCACACGGCATCCTTATCCTGGGCCAAGAGCAGGATACCTTGGGAGGCCGATTTGACGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023057.10 ENSMUST00000175858.10 |