Pregenerated sensors for NPTX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059991Ensembl transcript IDs: ENSMUST00000071782.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGGCCTTCCAGCAGCTGCAGTTCCCTCAGACGGAAAGTGCACATaGCAACGAGGGAGAGGCCCTATTTCAGGGGCTTCTGTGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: AGLPAAAVPSDGKCT*QRGRGPISGASVQC Trigger: ACACTGCACAGAAGCCCCTGAAATAGGGCCTCTCCCTCGTTGTCATGTGCACTTTCCGTCTGAGGGAACTGCAGCTGCTGGAAGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | AAACAACAGGCAGGGCTGGGCTGCATTAGCATTTACAGGGACTGGTaGAGAGGCTCACAGACTTTACTAGAAACCCCAGCAGGAAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: KQQAGLGCISIYRDW*RGSQTLLETPAGSG Trigger: GCCACTTCCTGCTGGGGTTTCTAGTAAAGTCTGTGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCAGCCCAGCCCTGCCTGTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | CAGCCAAATGACGCCCGAATCTCCAGTTCCGGGGGAAATACTCGATaGGGGACGGTCAGATGCTCACAGGAACCAATGTGGCTTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: QPNDARISSSGGNTR*GTVRCSQEPMWLTK Trigger: TTTTGTAAGCCACATTGGTTCCTGTGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGCGTCATTTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR GCA 90 bp | AGTGCACATGACAACGAGGGAGAGGCCCTATTTCAGGGGCTTCTGTaGAGTGTTCAGTCAAAAGCAGGGATGTGCTACACACACAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SAHDNEGEALFQGLL*SVQSKAGMCYTHKG Trigger: TCCCTTGTGTGTGTAGCACATCCCTGCTTTTGACTGAACACTGCACAGAAGCCCCTGAAATAGGGCCTCTCCCTCGTTGTCATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | GGAAGTACACATGAGACACCAAGGATCCAAAACAACAGGCAGGGCTaGGCTGCATTAGCATTTACAGGGACTGGTGGAGAGGCTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: GSTHETPRIQNNRQG*AALAFTGTGGEAHR Trigger: TCTGTGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCAGCCCAGCCCTGCCTGTTGTTTTGGATCCTTGGTGTCTCATGTGTACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | GGAAATACTCGATGGGGGACGGTCAGATGCTCACAGGAACCAATGTaGCTTACAAAACAAGCTCACTCTTCACAGTGGGCTGAGCATCAA | + |
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Preference number: 1 (lower is better) Translates to: GNTRWGTVRCSQEPM*LTKQAHSSQWAEHQ Trigger: TTGATGCTCAGCCCACTGTGAAGAGTGAGCTTGTTTTGTAAGCCACATTGGTTCCTGTGAGCATCTGACCGTCCCCCATCGAGTATTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | ACAAGAGCTCTTGTGGCATACAATGTCAGGATGGGCACATCAAGTTaGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGT | + |
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Preference number: 1 (lower is better) Translates to: TRALVAYNVRMGTSS*SYRWNIHGSAIQTC Trigger: ACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | AAAATTCCATCATCACAAGAGCTCTTGTGGCATACAATGTCAGGATaGGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCG | + |
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Preference number: 1 (lower is better) Translates to: KIPSSQELLWHTMSG*AHQVGPTDGTSMDP Trigger: CGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 90 bp | TTCCGGTGCACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTaGCATACAATGTCAGGATGGGCACATCAAGTTGGTCCTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: FRCTLIKIPSSQELL*HTMSGWAHQVGPTD Trigger: ATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTGCACCGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR TCA 90 bp | CGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCACAGCTCTTCACAGTGGGCTaGGCATCAAAAGGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RISSSGGNTRWGTVRCSQLFTVG*ASKGGE Trigger: CTCCCCTCCTTTTGATGCTCAGCCCACTGTGAAGAG...CTGTGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CAA 90 bp | TTTCTGTTCAGGCCAGAGGTTTTAGGTGAATGGGGAAGAGATGCCTaGAAGTCCTCAGAACAGCCCGATGGATCGTGGCCTCTGGGACGG | + |
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Preference number: 2 (lower is better) Translates to: FLFRPEVLGEWGRDA*KSSEQPDGSWPLGR Trigger: CCGTCCCAGAGGCCACGATCCATCGGGCTGTTCTGAGGACTTCAAGGCATCTCTTCCCCATTCACCTAAAACCTCTGGCCTGAACAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR TCA 90 bp | GGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACAATGCTGGGGATTGTCTaGGCAGCTGGCCTTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GTSSWSYRWNIHGSAIQTMLGIV*AAGLPA Trigger: TGCTGGAAGGCCAGCTGCTCAGACAATCCCCAGCAT...TGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACAGATTGTCTGAGCAGCTaGCCTTCCAGCAGCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GTSSWSYRWNIHGSAIQTDCLSS*PSSSCS Trigger: ACTGCAGCTGCTGGAAGGCCAGCTGCTCAGACAATC...TGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR TCA 90 bp | TCACAAGAGCTCTTGTGGCATACAATGTCAGGATGGGCACATCAAGTTGGTCCTACTTTTGGCACCAGATaGGAAGAGCAGCCCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SQELLWHTMSGWAHQVGPTFGTR*EEQPLK Trigger: TTTGAGGGGCTGCTCTTCTCATCTGGTGCCAAAAGT...AGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR TCA 90 bp | GGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACAGCCAGAGGTTTTAGGTaGATGGGGAAGAGATGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GTSSWSYRWNIHGSAIQTARGFR*MGKRCL Trigger: AAGGCATCTCTTCCCCATTCACCTAAAACCTCTGGC...TGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAGGGGCTTCTGTGCAGTGTTCAGTCAAAAGCAGGGATGTGCTACACACAAACAACAGGCAGGGCTaGGCTGCATTAGCATTTACA | + |
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Preference number: 2 (lower is better) Translates to: ISGASVQCSVKSRDVLHTNNRQG*AALAFT Trigger: TGTAAATGCTAATGCAGCCCAGCCCTGCCTGTTGTT...TGTGTGTAGCACATCCCTGCTTTTGACTGAACACTGCACAGAAGCCCCTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CAA 90 bp | CACAAGAGCTCTTGTGGCATACAATGTCAGGATGGGCACATCAAGTaGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATG | + |
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Preference number: 2 (lower is better) Translates to: HKSSCGIQCQDGHIK*VLQMEHPWIRNSNM Trigger: CATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAGGGGCTTCTGTGCAGTGTTCAGTCAAAAGCAGGGATGTGCTACACACAGAGGTTTTAGGTGAATaGGGAAGAGATGCCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ISGASVQCSVKSRDVLHTEVLGE*GRDALK Trigger: CTTCAAGGCATCTCTTCCCCATTCACCTAAAACCTC...TGTGTGTAGCACATCCCTGCTTTTGACTGAACACTGCACAGAAGCCCCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCGGTGCACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTGGCATACAAACCCCAGCAGGAAGTaGCTCAAGACTCTTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FRCTLIKIPSSQELLWHTNPSRK*LKTLPG Trigger: CCCTGGAAGAGTCTTGAGCCACTTCCTGCTGGGGTT...TGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTGCACCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CAA 90 bp | GTCTTCCGGTGCACTTTAATCAAAATTCCATCATCACAAGAGCTCTaGTGGCATACAATGTCAGGATGGGCACATCAAGTTGGTCCTACA | + |
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Preference number: 2 (lower is better) Translates to: VFRCTLIKIPSSQEL*WHTMSGWAHQVGPT Trigger: TGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTGCACCGGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR TCA 72 bp | GAGCAGCCCCTCAAAGCCAGCCCAGCAACGAGCCTCTaGGCGAGCGTGGGTCTGAGAGGGGGACCTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: EQPLKASPATSL*ASVGLRGGPSP Trigger: TGGAGAAGGTCCCCCTCTCAGACCCACGCTCGCTCAGAGGCTCGTTGCTGGGCTGGCTTTGAGGGGCTGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | GTCTGTTCCGGGGATGCTGGGGATTGTCTGAGCAGCTaGCCTTCCAGCAGCTGCAGTTCCCTCAGACGGAAA | + |
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Preference number: 3 (lower is better) Translates to: VCSGDAGDCLSS*PSSSCSSLRRK Trigger: TTTCCGTCTGAGGGAACTGCAGCTGCTGGAAGGCCAGCTGCTCAGACAATCCCCAGCATCCCCGGAACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR GCA 72 bp | GCTGGGGATTGTCTGAGCAGCTGGCCTTCCAGCAGCTaGAGTTCCCTCAGACGGAAAGTGCACATGACAACG | + |
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Preference number: 3 (lower is better) Translates to: AGDCLSSWPSSS*SSLRRKVHMTT Trigger: CGTTGTCATGTGCACTTTCCGTCTGAGGGAACTGCAGCTGCTGGAAGGCCAGCTGCTCAGACAATCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR GCA 72 bp | GACACCAAGGATCCAAAACAACAGGCAGGGCTGGGCTaGATTAGCATTTACAGGGACTGGTGGAGAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: DTKDPKQQAGLG*ISIYRDWWRGS Trigger: TGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCAGCCCAGCCCTGCCTGTTGTTTTGGATCCTTGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | GCAGGGCTGGGCTGCATTAGCATTTACAGGGACTGGTaGAGAGGCTCACAGACTTTACTAGAAACCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: AGLGCISIYRDW*RGSQTLLETPA Trigger: TGCTGGGGTTTCTAGTAAAGTCTGTGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCAGCCCAGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | CAGGCAGGGCTGGGCTGCATTAGCATTTACAGGGACTaGTGGAGAGGCTCACAGACTTTACTAGAAACCCCA | + |
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Preference number: 3 (lower is better) Translates to: QAGLGCISIYRD*WRGSQTLLETP Trigger: TGGGGTTTCTAGTAAAGTCTGTGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCAGCCCAGCCCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR GCA 72 bp | GACAACGAGGGAGAGGCCCTATTTCAGGGGCTTCTGTaGAGTGTTCAGTCAAAAGCAGGGATGTGCTACACA | + |
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Preference number: 3 (lower is better) Translates to: DNEGEALFQGLL*SVQSKAGMCYT Trigger: TGTGTAGCACATCCCTGCTTTTGACTGAACACTGCACAGAAGCCCCTGAAATAGGGCCTCTCCCTCGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | CATGAGACACCAAGGATCCAAAACAACAGGCAGGGCTaGGCTGCATTAGCATTTACAGGGACTGGTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: HETPRIQNNRQG*AALAFTGTGGE Trigger: CTCTCCACCAGTCCCTGTAAATGCTAATGCAGCCCAGCCCTGCCTGTTGTTTTGGATCCTTGGTGTCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | CGATGGGGGACGGTCAGATGCTCACAGGAACCAATGTaGCTTACAAAACAAGCTCACTCTTCACAGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RWGTVRCSQEPM*LTKQAHSSQWA Trigger: AGCCCACTGTGAAGAGTGAGCTTGTTTTGTAAGCCACATTGGTTCCTGTGAGCATCTGACCGTCCCCCATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | GGCTCTTTTCTGTTCAGGCCAGAGGTTTTAGGTGAATaGGGAAGAGATGCCTTGAAGTCCTCAGAACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GSFLFRPEVLGE*GRDALKSSEQP Trigger: GGGCTGTTCTGAGGACTTCAAGGCATCTCTTCCCCATTCACCTAAAACCTCTGGCCTGAACAGAAAAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | AGGCTCACAGACTTTACTAGAAACCCCAGCAGGAAGTaGCTCAAGACTCTTCCAGGGATTCTGTCACTACCC | + |
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Preference number: 3 (lower is better) Translates to: RLTDFTRNPSRK*LKTLPGILSLP Trigger: GGGTAGTGACAGAATCCCTGGAAGAGTCTTGAGCCACTTCCTGCTGGGGTTTCTAGTAAAGTCTGTGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | CTTGTGGCATACAATGTCAGGATGGGCACATCAAGTTaGTCCTACAGATGGAACATCCATGGATCCGCAATT | + |
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Preference number: 3 (lower is better) Translates to: LVAYNVRMGTSS*SYRWNIHGSAI Trigger: AATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | TCATCACAAGAGCTCTTGTGGCATACAATGTCAGGATaGGCACATCAAGTTGGTCCTACAGATGGAACATCC | + |
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Preference number: 3 (lower is better) Translates to: SSQELLWHTMSG*AHQVGPTDGTS Trigger: GGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGATGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CCA 72 bp | ACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTaGCATACAATGTCAGGATGGGCACATCAAGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: TLIKIPSSQELL*HTMSGWAHQVG Trigger: ACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | GCCCGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCAGAGCGCCTCCCTGCATaGGCATCGCGGGCAGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: ARISSSGGNTRWGTVRCSERLPA*ASRAAG Trigger: GCCCGCTGCCCGCGATGCCCATGCAGGGAGGCGCTC...TGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | TGTCTGTTCCGGGGATGCTGGGGATTGTCTGAGCAGCTGGCCTTCCAGCAGCTGCTCAGAGCGCCTCCCTaGATGGGCATCGCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLFRGCWGLSEQLAFQQLLRAPP*MGIAGS Trigger: GCTGCCCGCGATGCCCATGCAGGGAGGCGCTCTGAG...CAGCTGCTGGAAGGCCAGCTGCTCAGACAATCCCCAGCATCCCCGGAACAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | GAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCACAGGAGCTGCTCCACGACGTaGCCCGGGTCCCGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESPVPGEILDGGRSDAHRSCSTT*PGSRGR Trigger: CCTGCCGCGGGACCCGGGCCACGTCGTGGAGCAGCT...CCTGTGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | GCCCGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCACCCAGCGTCTCCTTCTaGTGCACGACGGTCTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: ARISSSGGNTRWGTVRCSPSVSF*CTTVSR Trigger: GCGCGAGACCGTCGTGCAGCAGAAGGAGACGCTGGG...TGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | CGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCACAGAAGGAGCGGCTAAGCTaGTCCACGACGTGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RISSSGGNTRWGTVRCSQKERLS*STTWPG Trigger: CCCGGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTT...CTGTGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | GCCCGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCAGATGAGCACGCCCCCTaGCTTAATGGGGTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ARISSSGGNTRWGTVRCSDEHAP*LNGVPG Trigger: CCCTGGCACCCCATTAAGCCAGGGGGCGTGCTCATC...TGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | CGAGGGAGAGGCCCTATTTCAGGGGCTTCTGTGCAGTGTTCAGTCAAAAGCAGGTGGCGTACCGATGCCTaGCGAGGCACTGGACCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGRGPISGASVQCSVKSRWRTDA*RGTGPQ Trigger: CTGCGGTCCAGTGCCTCGCCAGGCATCGGTACGCCA...CCTGCTTTTGACTGAACACTGCACAGAAGCCCCTGAAATAGGGCCTCTCCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR TCA 90 bp | GGCTCACAGACTTTACTAGAAACCCCAGCAGGAAGTGGCTCAAGACTCTTCCAGGGGCCAGCTTGCCGGTaGGCTCTCGGATGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GSQTLLETPAGSGSRLFQGPACR*ALGWLL Trigger: GAGAAGCCATCCGAGAGCTCACCGGCAAGCTGGCCC...CTGGAAGAGTCTTGAGCCACTTCCTGCTGGGGTTTCTAGTAAAGTCTGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | CAGGGACTGGTGGAGAGGCTCACAGACTTTACTAGAAACCCCAGCAGGAAGTGGGCGTGGCATCAAATCTaGCTCCCACCGTGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QGLVERLTDFTRNPSRKWAWHQI*LPPCPA Trigger: AGCAGGACACGGTGGGAGGCAGATTTGATGCCACGC...CCACTTCCTGCTGGGGTTTCTAGTAAAGTCTGTGAGCCTCTCCACCAGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | GGTGAATGGGGAAGAGATGCCTTGAAGTCCTCAGAACAGCCCGATGGATCGTGGTCTCCACAGGCCACTTaGAAGCCCCGCCGAACACAT | + |
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Preference number: 4 (lower is better) Translates to: GEWGRDALKSSEQPDGSWSPQAT*KPRRTH Trigger: ATGTGTTCGGCGGGGCTTCCAAGTGGCCTGTGGAGA...CCACGATCCATCGGGCTGTTCTGAGGACTTCAAGGCATCTCTTCCCCATTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CAA 72 bp | AGGCCAGAGGTTTTAGGTGAATGGGGAAGAGATGCCTaGAAGTCCTCAGAACAGCCCGATGGATCGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RPEVLGEWGRDA*KSSEQPDGSWP Trigger: AGGCCACGATCCATCGGGCTGTTCTGAGGACTTCAAGGCATCTCTTCCCCATTCACCTAAAACCTCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | TACAATGTCAGGATGGGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGAAGCGTCTCCTTCTGCTaGACGACGGTCTCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YNVRMGTSSWSYRWNIHGSVSFC*TTVSRS Trigger: GCTGCGCGAGACCGTCGTGCAGCAGAAGGAGACGCT...TCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGGACGGTCAGATGCTCACAGGAACCAATGTGGCTTACAAAACAAGCTCACGGTCCTTGAGGGTTTaGAAGGAGCGGCTAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MGDGQMLTGTNVAYKTSSRSLRV*KERLSC Trigger: GCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCG...TGAGCTTGTTTTGTAAGCCACATTGGTTCCTGTGAGCATCTGACCGTCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGTATACGGTCTCGCGCAGCTaGAGCACAGCGGCTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IKLVLQMEHPWIRNSNMYTVSRS*STAARS Trigger: GCTGCGAGCCGCTGTGCTGCAGCTGCGCGAGACCGT...ATACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | CCAATGTGGCTTACAAAACAAGCTCACTCTTCACAGTGGGCTGAGCATCAAAAGACCTTGCGTAGCAACTaGCTCTCCAGCTCCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMWLTKQAHSSQWAEHQKTLRSN*LSSSPS Trigger: GCTCGGGGAGCTGGAGAGGCAGTTGCTACGCAAGGT...CTTTTGATGCTCAGCCCACTGTGAAGAGTGAGCTTGTTTTGTAAGCCACATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | GGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACACCAGCTCCGCCACCTTaGGTAGCAACTGCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTSSWSYRWNIHGSAIQTPAPPP*VATASP Trigger: TGGAGAGGCAGTTGCTACGCAAGGTGGCGGAGCTGG...TGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR TCA 90 bp | CTGTGCAGTGTTCAGTCAAAAGCAGGGATGTGCTACACACACAAGGGACCTAGGGCCGAGGTCTCATTATaGAGCAGGGACTTCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSVQSKAGMCYTHKGPRAEVSL*SRDFSS Trigger: AGATGAGAAGTCCCTGCTTCATAATGAGACCTCGGC...CCTAGGTCCCTTGTGTGTGTAGCACATCCCTGCTTTTGACTGAACACTGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | ATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGTATCGGATGGCTTCTCGCTaGGCGCCCAGCGTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLVLQMEHPWIRNSNMYRMASR*APSVSF Trigger: GAAGGAGACGCTGGGCGCCCAGCGAGAAGCCATCCG...ATACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR TCA 90 bp | AGGCTCACAGACTTTACTAGAAACCCCAGCAGGAAGTGGCTCAAGACTCTTCCAATGCATCTGGTGACTTaGATGCACTGTTGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTDFTRNPSRKWLKTLPMHLVT*MHCCLA Trigger: AGCGAGGCAACAGTGCATTCAAGTCACCAGATGCAT...TGGAAGAGTCTTGAGCCACTTCCTGCTGGGGTTTCTAGTAAAGTCTGTGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGTATTGCACACGAAGCGGCTaGCAGGTATCGGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLVLQMEHPWIRNSNMYCTRSG*QVSGCP Trigger: AGGACAGCCCGATACCTGGCAGCCGCTTCGTGTGCA...ATACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGTATGCAGGGCGTTCAGCGTaGTCTCTGTCTTCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKLVLQMEHPWIRNSNMYAGRSA*SLSSAG Trigger: ACCGGCAGAAGACAGAGAGCACGCTGAACGCCCTGC...ATACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | ACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTGGCATACAATGTCAGGACCTCCCACCGTGTCCTaGTCCTGCCCCAGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLIKIPSSQELLWHTMSGPPTVS*SCPRMS Trigger: GCTCATCCTGGGGCAGGAGCAGGACACGGTGGGAGG...TCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR TCA 90 bp | CACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTGGCATACAATGTCAGGTGTCCACCCACGGGATaGTGTTGCCGGGCATGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HFNQNSIITRALVAYNVRCPPTG*CCRACS Trigger: CGAACATGCCCGGCAACATCATCCCGTGGGTGGACA...CCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGGACGGTCAGATGCTCACAGGAACCAATGTGGCTTACAAAACAAGCTCATCCCATATGTTGAACTaGCTGAGCTCTCCAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MGDGQMLTGTNVAYKTSSSHMLN*LSSPTK Trigger: CTTTGTTGGAGAGCTCAGCCAGTTCAACATATGGGA...TGAGCTTGTTTTGTAAGCCACATTGGTTCCTGTGAGCATCTGACCGTCCCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CCA 90 bp | CACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTGGCATACAATGTCAGGCACAGCGTAGGAGAATaGCGTACCGATGCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HFNQNSIITRALVAYNVRHSVGE*RTDAWR Trigger: TCGCCAGGCATCGGTACGCCATTCTCCTACGCTGTG...CCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| 3UTR CAA 72 bp | TTTGTGGGGATTGTTGTAGAAGCTGCAAATGAACTTTaGGCACCAGATGAGAAGAGCAGCCCCTCAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVGIVVEAANEL*APDEKSSPSKP Trigger: TGGCTTTGAGGGGCTGCTCTTCTCATCTGGTGCCAAAAGTTCATTTGCAGCTTCTACAACAATCCCCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| 3UTR CAA 72 bp | TCTTGTGGCATACAATGTCAGGATGGGCACATCAAGTaGGTCCTACAGATGGAACATCCATGGATCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCGIQCQDGHIK*VLQMEHPWIRN Trigger: ATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCCCATCCTGACATTGTATGCCACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR GCA 90 bp | ACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTGGCATACAATGTCAGGAGTGATGCAGATGTGGTaGCACTTGCCATCACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLIKIPSSQELLWHTMSGVMQMW*HLPSLT Trigger: TGTCAGTGATGGCAAGTGGCACCACATCTGCATCAC...TCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| 3UTR CAA 72 bp | TGCACTTTAATCAAAATTCCATCATCACAAGAGCTCTaGTGGCATACAATGTCAGGATGGGCACATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CTLIKIPSSQEL*WHTMSGWAHQV Trigger: AACTTGATGTGCCCATCCTGACATTGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CCA 90 bp | CAGCGGCTCGCAGCTCCTCCTCGGGGCTCAGAGCGCCTCCCTGCATaGGCATCGCGGGCAGCGGGCAGCCGGCGCGCGCCGCTTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRLAAPPRGSERLPA*ASRAAGSRRAPLRG Trigger: CCCCCGAAGCGGCGCGCGCCGGCTGCCCGCTGCCCGCGATGCCCATGCAGGGAGGCGCTCTGAGCCCCGAGGAGGAGCTGCGAGCCGCTG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS GCA 90 bp | AGCACAGCGGCTCGCAGCTCCTCCTCGGGGCTCAGAGCGCCTCCCTaGATGGGCATCGCGGGCAGCGGGCAGCCGGCGCGCGCCGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: STAARSSSSGLRAPP*MGIAGSGQPARAAS Trigger: CGAAGCGGCGCGCGCCGGCTGCCCGCTGCCCGCGATGCCCATGCAGGGAGGCGCTCTGAGCCCCGAGGAGGAGCTGCGAGCCGCTGTGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CCA 90 bp | GGCAACGCGGTGCACACGAAGCGGCTGCCAGGTATCGGGCTGTCCTaGGCTCGTCCGGCGGCCACGGCGAGCGCCACGCCGACGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNAVHTKRLPGIGLS*ARPAATASATPTVS Trigger: GCTGACCGTCGGCGTGGCGCTCGCCGTGGCCGCCGGACGAGCCCAGGACAGCCCGATACCTGGCAGCCGCTTCGTGTGCACCGCGTTGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 90 bp | AGGCTCTCCAAGCGGTCCTTGAGGGTTTGCAAGGAGCGGCTAAGCTaGTCCACGACGTGGCCCGGGTCCCGCGGCAGGTCGCCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSKRSLRVCKERLS*STTWPGSRGRSPMV Trigger: CACCATGGGCGACCTGCCGCGGGACCCGGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTTGGAGAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 90 bp | GTGCGGAGCTGGAGCTCGAGGCTCTCCAAGCGGTCCTTGAGGGTTTaGAAGGAGCGGCTAAGCTGCTCCACGACGTGGCCCGGGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSWSSRLSKRSLRV*KERLSCSTTWPGSR Trigger: GCGGGACCCGGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTTGGAGAGCCTCGAGCTCCAGCTCCGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS CCA 90 bp | GCCACCTTGCGTAGCAACTGCCTCTCCAGCTCCCCGAGCCTCCGCTaGAGCACCTCTCGGAAGTCGCTCGGCAGCCCAGCGTTAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: ATLRSNCLSSSPSLR*STSRKSLGSPALDT Trigger: TGTGTCTAACGCTGGGCTGCCGAGCGACTTCCGAGAGGTGCTCCAGCGGAGGCTCGGGGAGCTGGAGAGGCAGTTGCTACGCAAGGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 90 bp | AGCAGGGACTTCTCATCTTCCAGCTCCGCCACCTTGCGTAGCAACTaGCTCTCCAGCTCCCCGAGCCTCCGCTGGAGCACCTCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRDFSSSSSATLRSN*LSSSPSLRWSTSRK Trigger: CTTCCGAGAGGTGCTCCAGCGGAGGCTCGGGGAGCTGGAGAGGCAGTTGCTACGCAAGGTGGCGGAGCTGGAAGATGAGAAGTCCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAAATGACGCCCGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGTCGCAGCGGGCCAGCTaGCCGGTGAGCTCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QPNDARISSSGGNTRWGTSQRAS*PVSSRM Trigger: CATCCGAGAGCTCACCGGCAAGCTGGCCCGCTGCGA...CGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGCGTCATTTGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 90 bp | TGCCTCGCTCCAGCTCAGTCACCCTCTGCAGCAGGGCGTTCAGCGTaGTCTCTGTCTTCTGCCGGTGAGCCGAGGTCTCATTATGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLAPAQSPSAAGRSA*SLSSAGEPRSHYEA Trigger: TGCTTCATAATGAGACCTCGGCTCACCGGCAGAAGACAGAGAGCACGCTGAACGCCCTGCTGCAGAGGGTGACTGAGCTGGAGCGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 90 bp | TCTCATTATGAAGCAGGGACTTCTCATCTTCCAGCTCCGCCACCTTaGGTAGCAACTGCCTCTCCAGCTCCCCGAGCCTCCGCTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHYEAGTSHLPAPPP*VATASPAPRASAGA Trigger: TGCTCCAGCGGAGGCTCGGGGAGCTGGAGAGGCAGTTGCTACGCAAGGTGGCGGAGCTGGAAGATGAGAAGTCCCTGCTTCATAATGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 90 bp | TTGCCGGGCATGTTCGTGGAGCAGTTGGCGATGTTGATGATCTCCTaGGCCCGGAGGACGCGGTCCCATATGTTGAACTGGCTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGMFVEQLAMLMIS*ARRTRSHMLNWLSS Trigger: AGAGCTCAGCCAGTTCAACATATGGGACCGCGTCCTCCGGGCGCAGGAGATCATCAACATCGCCAACTGCTCCACGAACATGCCCGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | GCCCGAATCTCCAGTTCCGGGGGAAATACTCGATGGGGGACGGTCAGATGCTCAGGCAGCTGTGCGACCTaGTCGTTGATGAGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARISSSGGNTRWGTVRCSGSCAT*SLMSSS Trigger: TGAGCTGCTCATCAACGACAAGGTCGCACAGCTGCC...TGAGCATCTGACCGTCCCCCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTTCCAGCAGCTGCAGTTCCCTCAGACGGAAAGTGCACATGACAACGAGGATGTTCGTGGAGCAGTaGGCGATGTTGATGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPSSSCSSLRRKVHMTTRMFVEQ*AMLMIS Trigger: GGAGATCATCAACATCGCCAACTGCTCCACGAACAT...CCTCGTTGTCATGTGCACTTTCCGTCTGAGGGAACTGCAGCTGCTGGAAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | AGGCTCACAGACTTTACTAGAAACCCCAGCAGGAAGTGGCTCAAGACTCTTCCAACCCACGGGATGATGTaGCCGGGCATGTTCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLTDFTRNPSRKWLKTLPTHGMM*PGMFVE Trigger: CTCCACGAACATGCCCGGCAACATCATCCCGTGGGT...TGGAAGAGTCTTGAGCCACTTCCTGCTGGGGTTTCTAGTAAAGTCTGTGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS TCA 90 bp | CAGGTAGTTTGTACGGAGAGGAAGGGACACTTTGAATGCATCTGGTaGCTTGAATGCACTGTTGCCTCGCTCCAGCTCAGTCACCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVVCTERKGHFECIW*LECTVASLQLSHPL Trigger: CAGAGGGTGACTGAGCTGGAGCGAGGCAACAGTGCATTCAAGTCACCAGATGCATTCAAAGTGTCCCTTCCTCTCCGTACAAACTACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | TTCCGGTGCACTTTAATCAAAATTCCATCATCACAAGAGCTCTTGTGGCATACATCGCCCATGGTGTCCTaGCCTGTGCCGCGCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRCTLIKIPSSQELLWHTSPMVS*PVPRAL Trigger: CAAGGCGCGCGGCACAGGCAAGGACACCATGGGCGA...TGTATGCCACAAGAGCTCTTGTGATGATGGAATTTTGATTAAAGTGCACCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | TGCATTAGCATTTACAGGGACTGGTGGAGAGGCTCACAGACTTTACTAGAAACCATCAGCACAATCTCGTaGGCTTGCCCGGGCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CISIYRDWWRGSQTLLETISTIS*ACPGTA Trigger: CGCTGTGCCCGGGCAAGCCAACGAGATTGTGCTGAT...GGTTTCTAGTAAAGTCTGTGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | ACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGTGCGGTCCTTGAGGGTTaGCAAGGAGCGGCTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSSWSYRWNIHGSAIQTCAVLEG*QGAAKL Trigger: CAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGC...ACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | TGCATTAGCATTTACAGGGACTGGTGGAGAGGCTCACAGACTTTACTAGAAACCTGTGCGACCTTGTCGTaGATGAGCAGCTCAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CISIYRDWWRGSQTLLETCATLS*MSSSMG Trigger: CCCCATTGAGCTGCTCATCAACGACAAGGTCGCACA...GGTTTCTAGTAAAGTCTGTGAGCCTCTCCACCAGTCCCTGTAAATGCTAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | CCAATGTGGCTTACAAAACAAGCTCACTCTTCACAGTGGGCTGAGCATCAAAAGACGCGGTCCCATATGTaGAACTGGCTGAGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMWLTKQAHSSQWAEHQKTRSHM*NWLSSP Trigger: TGGAGAGCTCAGCCAGTTCAACATATGGGACCGCGT...CTTTTGATGCTCAGCCCACTGTGAAGAGTGAGCTTGTTTTGTAAGCCACATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | GGCACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACACCGAACACATCGACATaGTTGTCCACCCACGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTSSWSYRWNIHGSAIQTPNTST*LSTHGM Trigger: CATCCCGTGGGTGGACAACAATGTCGATGTGTTCGG...TGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | TTTACTAGAAACCCCAGCAGGAAGTGGCTCAAGACTCTTCCAGGGATTCTGTCAAACACATCGACATTGTaGTCCACCCACGGGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: FTRNPSRKWLKTLPGILSNTSTL*STHGMM Trigger: CATCATCCCGTGGGTGGACAACAATGTCGATGTGTT...TGACAGAATCCCTGGAAGAGTCTTGAGCCACTTCCTGCTGGGGTTTCTAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | ACATCAAGTTGGTCCTACAGATGGAACATCCATGGATCCGCAATTCAAACATGTGACTTGAATGCACTGTaGCCTCGCTCCAGCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSWSYRWNIHGSAIQTCDLNAL*PRSSSV Trigger: GACTGAGCTGGAGCGAGGCAACAGTGCATTCAAGTC...ACATGTTTGAATTGCGGATCCATGGATGTTCCATCTGTAGGACCAACTTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS-3UTR CAA 90 bp | ATTTCAGGGGCTTCTGTGCAGTGTTCAGTCAAAAGCAGGGATGTGCTACACACAAGAGGAAGGGACACTTaGAATGCATCTGGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISGASVQCSVKSRDVLHTRGRDT*NASGDL Trigger: CAAGTCACCAGATGCATTCAAAGTGTCCCTTCCTCT...TGTGTGTAGCACATCCCTGCTTTTGACTGAACACTGCACAGAAGCCCCTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 72 bp | GCTCGCAGCTCCTCCTCGGGGCTCAGAGCGCCTCCCTaGATGGGCATCGCGGGCAGCGGGCAGCCGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSSSSGLRAPP*MGIAGSGQPAR Trigger: GCGCGCCGGCTGCCCGCTGCCCGCGATGCCCATGCAGGGAGGCGCTCTGAGCCCCGAGGAGGAGCTGCGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS CCA 72 bp | GTGCACACGAAGCGGCTGCCAGGTATCGGGCTGTCCTaGGCTCGTCCGGCGGCCACGGCGAGCGCCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VHTKRLPGIGLS*ARPAATASATP Trigger: CGGCGTGGCGCTCGCCGTGGCCGCCGGACGAGCCCAGGACAGCCCGATACCTGGCAGCCGCTTCGTGTGCAC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS CCA 72 bp | AGGGTTTGCAAGGAGCGGCTAAGCTGCTCCACGACGTaGCCCGGGTCCCGCGGCAGGTCGCCCATGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVCKERLSCSTT*PGSRGRSPMVS Trigger: GGACACCATGGGCGACCTGCCGCGGGACCCGGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS CCA 72 bp | CGTAGCAACTGCCTCTCCAGCTCCCCGAGCCTCCGCTaGAGCACCTCTCGGAAGTCGCTCGGCAGCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RSNCLSSSPSLR*STSRKSLGSPA Trigger: CGCTGGGCTGCCGAGCGACTTCCGAGAGGTGCTCCAGCGGAGGCTCGGGGAGCTGGAGAGGCAGTTGCTACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS GCA 72 bp | AAGCGGTCCTTGAGGGTTTGCAAGGAGCGGCTAAGCTaGTCCACGACGTGGCCCGGGTCCCGCGGCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: KRSLRVCKERLS*STTWPGSRGRS Trigger: CGACCTGCCGCGGGACCCGGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS CAA 90 bp | TGTGCGGAGCTGGAGCTCGAGGCTCTCCAAGCGGTCCTTGAGGGTTaGCAAGGAGCGGCTAAGCTGCTCCACGACGTGGCCCGGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CAELELEALQAVLEG*QGAAKLLHDVARVP Trigger: CGGGACCCGGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTTGGAGAGCCTCGAGCTCCAGCTCCGCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS GCA 72 bp | TGGAGCTCGAGGCTCTCCAAGCGGTCCTTGAGGGTTTaGAAGGAGCGGCTAAGCTGCTCCACGACGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WSSRLSKRSLRV*KERLSCSTTWP Trigger: GGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTTGGAGAGCCTCGAGCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
||
| CDS GCA 72 bp | TTCTCATCTTCCAGCTCCGCCACCTTGCGTAGCAACTaGCTCTCCAGCTCCCCGAGCCTCCGCTGGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: FSSSSSATLRSN*LSSSPSLRWST Trigger: GGTGCTCCAGCGGAGGCTCGGGGAGCTGGAGAGGCAGTTGCTACGCAAGGTGGCGGAGCTGGAAGATGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 72 bp | CTGGAGCTCGAGGCTCTCCAAGCGGTCCTTGAGGGTTaGCAAGGAGCGGCTAAGCTGCTCCACGACGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LELEALQAVLEG*QGAAKLLHDVA Trigger: GGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTTGGAGAGCCTCGAGCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 90 bp | GACACATTTGTGCGGAGCTGGAGCTCGAGGCTCTCCAAGCGGTCCTaGAGGGTTTGCAAGGAGCGGCTAAGCTGCTCCACGACGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: DTFVRSWSSRLSKRS*RVCKERLSCSTTWP Trigger: GGGCCACGTCGTGGAGCAGCTTAGCCGCTCCTTGCAAACCCTCAAGGACCGCTTGGAGAGCCTCGAGCTCCAGCTCCGCACAAATGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 72 bp | CCAGCTCAGTCACCCTCTGCAGCAGGGCGTTCAGCGTaGTCTCTGTCTTCTGCCGGTGAGCCGAGGTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PAQSPSAAGRSA*SLSSAGEPRSH Trigger: ATGAGACCTCGGCTCACCGGCAGAAGACAGAGAGCACGCTGAACGCCCTGCTGCAGAGGGTGACTGAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 90 bp | TTGTCCACCCACGGGATGATGTTGCCGGGCATGTTCGTGGAGCAGTaGGCGATGTTGATGATCTCCTGCGCCCGGAGGACGCGGTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSTHGMMLPGMFVEQ*AMLMISCARRTRSH Trigger: ATGGGACCGCGTCCTCCGGGCGCAGGAGATCATCAACATCGCCAACTGCTCCACGAACATGCCCGGCAACATCATCCCGTGGGTGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 72 bp | ATGTTGCCGGGCATGTTCGTGGAGCAGTTGGCGATGTaGATGATCTCCTGCGCCCGGAGGACGCGGTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: MLPGMFVEQLAM*MISCARRTRSH Trigger: ATGGGACCGCGTCCTCCGGGCGCAGGAGATCATCAACATCGCCAACTGCTCCACGAACATGCCCGGCAACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 72 bp | CACGGGATGATGTTGCCGGGCATGTTCGTGGAGCAGTaGGCGATGTTGATGATCTCCTGCGCCCGGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: HGMMLPGMFVEQ*AMLMISCARRT Trigger: CGTCCTCCGGGCGCAGGAGATCATCAACATCGCCAACTGCTCCACGAACATGCCCGGCAACATCATCCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 90 bp | GTCTCCACAGGCCACTTGGAAGCCCCGCCGAACACATCGACATTGTaGTCCACCCACGGGATGATGTTGCCGGGCATGTTCGTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VSTGHLEAPPNTSTL*STHGMMLPGMFVEQ Trigger: CTGCTCCACGAACATGCCCGGCAACATCATCCCGTGGGTGGACAACAATGTCGATGTGTTCGGCGGGGCTTCCAAGTGGCCTGTGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 72 bp | AATGCACTGTTGCCTCGCTCCAGCTCAGTCACCCTCTaGAGCAGGGCGTTCAGCGTGCTCTCTGTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: NALLPRSSSVTL*SRAFSVLSVFC Trigger: GCAGAAGACAGAGAGCACGCTGAACGCCCTGCTGCAGAGGGTGACTGAGCTGGAGCGAGGCAACAGTGCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CCA 72 bp | CCAGGAGCCGCTCTTCACAGGTCTCCACAGGCCACTTaGAAGCCCCGCCGAACACATCGACATTGTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGAALHRSPQAT*KPRRTHRHCCP Trigger: TGGACAACAATGTCGATGTGTTCGGCGGGGCTTCCAAGTGGCCTGTGGAGACCTGTGAAGAGCGGCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 72 bp | ATGATCTCCTGCGCCCGGAGGACGCGGTCCCATATGTaGAACTGGCTGAGCTCTCCAACAAAGGCCTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: MISCARRTRSHM*NWLSSPTKACV Trigger: CACGCAGGCCTTTGTTGGAGAGCTCAGCCAGTTCAACATATGGGACCGCGTCCTCCGGGCGCAGGAGATCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 72 bp | TCCAGGAGCCGCTCTTCACAGGTCTCCACAGGCCACTaGGAAGCCCCGCCGAACACATCGACATTGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSRSSQVSTGH*EAPPNTSTLLS Trigger: GGACAACAATGTCGATGTGTTCGGCGGGGCTTCCAAGTGGCCTGTGGAGACCTGTGAAGAGCGGCTCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS CAA 90 bp | CACGGGATGATGTTGCCGGGCATGTTCGTGGAGCAGTTGGCGATGTaGATGATCTCCTGCGCCCGGAGGACGCGGTCCCATATGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: HGMMLPGMFVEQLAM*MISCARRTRSHMLN Trigger: GTTCAACATATGGGACCGCGTCCTCCGGGCGCAGGAGATCATCAACATCGCCAACTGCTCCACGAACATGCCCGGCAACATCATCCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS TCA 72 bp | CGCCGAACACATCGACATTGTTGTCCACCCACGGGATaGTGTTGCCGGGCATGTTCGTGGAGCAGTTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RRTHRHCCPPTG*CCRACSWSSWR Trigger: TCGCCAACTGCTCCACGAACATGCCCGGCAACATCATCCCGTGGGTGGACAACAATGTCGATGTGTTCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS GCA 72 bp | ATGTTCGTGGAGCAGTTGGCGATGTTGATGATCTCCTaGGCCCGGAGGACGCGGTCCCATATGTTGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: MFVEQLAMLMIS*ARRTRSHMLNW Trigger: CCAGTTCAACATATGGGACCGCGTCCTCCGGGCGCAGGAGATCATCAACATCGCCAACTGCTCCACGAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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| CDS TCA 72 bp | TGTACGGAGAGGAAGGGACACTTTGAATGCATCTGGTaGCTTGAATGCACTGTTGCCTCGCTCCAGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: CTERKGHFECIW*LECTVASLQLS Trigger: ACTGAGCTGGAGCGAGGCAACAGTGCATTCAAGTCACCAGATGCATTCAAAGTGTCCCTTCCTCTCCGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071782.8 |
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