Pregenerated sensors for NPTX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025582Ensembl transcript IDs: ENSMUST00000026670.5
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGGGGTGTCCTTGGGGGCCAGAGAAGAGCCGGGACTGCTTCAAGTaGACAAGGAGGACAACCAGGCTGTGTGCGTGTGCGTGTGCAGGG | + |
Preference number: 1 (lower is better) Translates to: RGCPWGPEKSRDCFK*TRRTTRLCACACAG Trigger: CCCTGCACACGCACACGCACACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAGTCCCGGCTCTTCTCTGGCCCCCAAGGACACCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | CAGAAGCATTGGGGTGTGCTCTGCCCTCTAAGCCAGGGCAGAGGATaGCTTGTGGTCCTGAACGGACAGCTCCCACCCCACCCGTCTGGG | + |
Preference number: 1 (lower is better) Translates to: QKHWGVLCPLSQGRG*LVVLNGQLPPHPSG Trigger: CCCAGACGGGTGGGGTGGGAGCTGTCCGTTCAGGACCACAAGCCATCCTCTGCCCTGGCTTAGAGGGCAGAGCACACCCCAATGCTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 90 bp | GAGCCGGGACTGCTTCAAGTGCACAAGGAGGACAACCAGGCTGTGTaGGTGTGCGTGTGCAGGGGCCATGGCCTTGAGTCATTCCTGGGG | + |
Preference number: 1 (lower is better) Translates to: EPGLLQVHKEDNQAV*VCVCRGHGLESFLG Trigger: CCCCAGGAATGACTCAAGGCCATGGCCCCTGCACACGCACACGCACACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAGTCCCGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 90 bp | CTAGAGAGAAGGGGGTGTCCTTGGGGGCCAGAGAAGAGCCGGGACTaGTTCAAGTGCACAAGGAGGACAACCAGGCTGTGTGCGTGTGCG | + |
Preference number: 1 (lower is better) Translates to: LERRGCPWGPEKSRD*FKCTRRTTRLCACA Trigger: CGCACACGCACACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAGTCCCGGCTCTTCTCTGGCCCCCAAGGACACCCCCTTCTCTCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 90 bp | CCACCCTGCCTGGACACAGCCTCCTCAGCATTCAACAGACACATGTaGACACACGCATTTCGTCCCCCTCCTCAGAAGGCCCAGAAGGGG | + |
Preference number: 1 (lower is better) Translates to: PPCLDTASSAFNRHM*THAFRPPPQKAQKG Trigger: CCCCTTCTGGGCCTTCTGAGGAGGGGGACGAAATGCGTGTGTGCACATGTGTCTGTTGAATGCTGAGGAGGCTGTGTCCAGGCAGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | CACTTGAAGCCTCTGGTCTCTCATTGCCAGAGGGAGGAAGAAGGGTaGGTGCCAAGGCCCTGTGTCCTGGGACTCTGGAAGGGCACTCTC | + |
Preference number: 1 (lower is better) Translates to: HLKPLVSHCQREEEG*VPRPCVLGLWKGTL Trigger: GAGAGTGCCCTTCCAGAGTCCCAGGACACAGGGCCTTGGCACCCACCCTTCTTCCTCCCTCTGGCAATGAGAGACCAGAGGCTTCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | AGCAAGAAGGCTTACAATTCAAGTGAGCTCTCAGCCCCTAGGGCCTaGGAGCCTCCGTGGCAGCTCTACCACCCTAATGCCCAGGGTGCT | + |
Preference number: 1 (lower is better) Translates to: SKKAYNSSELSAPRA*EPPWQLYHPNAQGA Trigger: AGCACCCTGGGCATTAGGGTGGTAGAGCTGCCACGGAGGCTCCCAGGCCCTAGGGGCTGAGAGCTCACTTGAATTGTAAGCCTTCTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 90 bp | ACCCGGCGGGCGCTGAGGAAGCACAATTATCTAAGAAAAAGCCACTaGTGGACAACGGGTGGAGCACAGCCTGATCCGCACCCTCAGAGA | + |
Preference number: 1 (lower is better) Translates to: TRRALRKHNYLRKSH*WTTGGAQPDPHPQR Trigger: TCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTGGCTTTTTCTTAGATAATTGTGCTTCCTCAGCGCCCGCCGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | CAGAGACCTACATCACTCCCAAAGAGGTCTGCAAACAAGGACAAATaGGTGGTCCAGGAAGCCGCACCAGCCCTGAGGCACACAGGCAGC | + |
Preference number: 1 (lower is better) Translates to: QRPTSLPKRSANKDK*VVQEAAPALRHTGS Trigger: GCTGCCTGTGTGCCTCAGGGCTGGTGCGGCTTCCTGGACCACCCATTTGTCCTTGTTTGCAGACCTCTTTGGGAGTGATGTAGGTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | CGGCGGGCGCTGAGGAAGCACAATTATCTAAGAAAAAGCCACTGCTaGACAACGGGTGGAGCACAGCCTGATCCGCACCCTCAGAGAGGA | + |
Preference number: 1 (lower is better) Translates to: RRALRKHNYLRKSHC*TTGGAQPDPHPQRG Trigger: TCCTCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTGGCTTTTTCTTAGATAATTGTGCTTCCTCAGCGCCCGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 90 bp | CAAGGGAACACGCGTCAGACCAAGGGAGCAAGGGACACACCACCCTaGGGAACATGCAAACACAGAAGATCCCCGCAGATCCAAGGATGC | + |
Preference number: 1 (lower is better) Translates to: QGNTRQTKGARDTPP*GTCKHRRSPQIQGC Trigger: GCATCCTTGGATCTGCGGGGATCTTCTGTGTTTGCATGTTCCTCAGGGTGGTGTGTCCCTTGCTCCCTTGGTCTGACGCGTGTTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 90 bp | TTATCTAAGAAAAAGCCACTGCTGGACAACGGGTGGAGCACAGCCTaGTCCGCACCCTCAGAGAGGATGCACCACAGAGCAGTGACCAGG | + |
Preference number: 1 (lower is better) Translates to: LSKKKPLLDNGWSTA*SAPSERMHHRAVTR Trigger: CCTGGTCACTGCTCTGTGGTGCATCCTCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTGGCTTTTTCTTAGATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 90 bp | TCAGATGTAGACAGCAGACAGCCTGATGGGGACGTGGGAAGGGGCTaGTTGGTAGGTGGTGCCATCCCTGGACAACCAGCCTTTGAATTT | + |
Preference number: 1 (lower is better) Translates to: SDVDSRQPDGDVGRG*LVGGAIPGQPAFEF Trigger: AAATTCAAAGGCTGGTTGTCCAGGGATGGCACCACCTACCAATCAGCCCCTTCCCACGTCCCCATCAGGCTGTCTGCTGTCTACATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | GACAGCACACAGACAGACACGGATGCACTAGTTTCAGACACAACATaGACCTGTGTGGAAGGAGACAGGTGCCCCTGGAAGGAACAGCAG | + |
Preference number: 1 (lower is better) Translates to: DSTQTDTDALVSDTT*TCVEGDRCPWKEQQ Trigger: CTGCTGTTCCTTCCAGGGGCACCTGTCTCCTTCCACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTGTGTGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | CCAACACCCCTGGCTTGCTTACCCAGCCATTTTTCAGTAGCTACATaGGTGATCACAGAACACTGGGTGGCATTCAGCACACAAACACAG | + |
Preference number: 1 (lower is better) Translates to: PTPLACLPSHFSVAT*VITEHWVAFSTQTQ Trigger: CTGTGTTTGTGTGCTGAATGCCACCCAGTGTTCTGTGATCACCCATGTAGCTACTGAAAAATGGCTGGGTAAGCAAGCCAGGGGTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | AGGCTTGTTCTCAACCTAGATGTTAGAAATGCTTCTTGCTATGTCTaGGGAGGGGGAGGGGAGAGGCATGTTGATCTCTCTCCTGACCTC | + |
Preference number: 1 (lower is better) Translates to: RLVLNLDVRNASCYV*GGGGERHVDLSPDL Trigger: GAGGTCAGGAGAGAGATCAACATGCCTCTCCCCTCCCCCTCCCCAGACATAGCAAGAAGCATTTCTAACATCTAGGTTGAGAACAAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | GTGGCTCCCAGAAGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTaGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATGGGT | + |
Preference number: 1 (lower is better) Translates to: VAPRRLKVRVGLDLV*KVDLKFKFSLPTMG Trigger: ACCCATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCTTCTGGGAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 90 bp | GTGCAAGAGGGAACATCAATCAGATTACGGAGTCGATGGGAAATATaGGGATTAGATTTGCGGCTGTCGTTACCTTTCTCAGGGCCAGCA | + |
Preference number: 1 (lower is better) Translates to: VQEGTSIRLRSRWEI*GLDLRLSLPFSGPA Trigger: TGCTGGCCCTGAGAAAGGTAACGACAGCCGCAAATCTAATCCGCATATTTCCCATCGACTCCGTAATCTGATTGATGTTCCCTCTTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 90 bp | TATTATTCAGTGCAAGAGGGAACATCAATCAGATTACGGAGTCGATaGGAAATATGCGGATTAGATTTGCGGCTGTCGTTACCTTTCTCA | + |
Preference number: 1 (lower is better) Translates to: YYSVQEGTSIRLRSR*EICGLDLRLSLPFS Trigger: TGAGAAAGGTAACGACAGCCGCAAATCTAATCCGCATATTTCCCATCGACTCCGTAATCTGATTGATGTTCCCTCTTGCACTGAATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 90 bp | TTATTTTATAAAATGGCTTACCTGAGAGAGGCATGTATTATTCAGTaGAAGAGGGAACATCAATCAGATTACGGAGTCGATGGGAAATAT | + |
Preference number: 1 (lower is better) Translates to: LFYKMAYLREACIIQ*KREHQSDYGVDGKY Trigger: ATATTTCCCATCGACTCCGTAATCTGATTGATGTTCCCTCTTGCACTGAATAATACATGCCTCTCTCAGGTAAGCCATTTTATAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | CAGCCCATGCCACCCTCAGATGTAGACAGCAGACAGCCTGATGGGGACGTGGGAGGCAGGCGCTGGGGCTaGGGGCTCAGCCCTAGCCTG | + |
Preference number: 2 (lower is better) Translates to: QPMPPSDVDSRQPDGDVGGRRWG*GLSPSL Trigger: CAGGCTAGGGCTGAGCCCCCAGCCCCAGCGCCTGCC...TCCCACGTCCCCATCAGGCTGTCTGCTGTCTACATCTGAGGGTGGCATGGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | GCTTGTGGTCCTGAACGGACAGCTCCCACCCCACCCGTCTGGGTGCAAGTGGTCGCTCTGGGCCTCGCCTaGTGGTGGCTCCCAGAAGGC | + |
Preference number: 2 (lower is better) Translates to: ACGPERTAPTPPVWVQVVALGLA*WWLPEG Trigger: GCCTTCTGGGAGCCACCACCAGGCGAGGCCCAGAGC...GACCACTTGCACCCAGACGGGTGGGGTGGGAGCTGTCCGTTCAGGACCACAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | CAGGAGTGGATGGCAGGACCCACCCCGGCCAGCAGGCTCCACATGAGAGGTTTCAGGAAGAAGGGTGGGTaGCAAGGCCCTGTGTCCTGG | + |
Preference number: 2 (lower is better) Translates to: QEWMAGPTPASRLHMRGFRKKGG*QGPVSW Trigger: CCAGGACACAGGGCCTTGGCACCCACCCTTCTTCCT...GAAACCTCTCATGTGGAGCCTGCTGGCCGGGGTGGGTCCTGCCATCCACTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | CTGGGGCTGGTGGCAGGGGTTGGCAGGAGTACACCGGGCATAGCCGGCTCTGGGCCAACACCCCTGGCTTaGTTACCCAGCCATTTTTCA | + |
Preference number: 2 (lower is better) Translates to: LGLVAGVGRSTPGIAGSGPTPLA*LPSHFS Trigger: TGAAAAATGGCTGGGTAAGCAAGCCAGGGGTGTTGG...CCCAGAGCCGGCTATGCCCGGTGTACTCCTGCCAACCCCTGCCACCAGCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | GCATTTCGTCCCCCTCCTCAGAAGGCCCAGAAGGGGGTACTCATGCCTACTTTCAGGCCGGTGGCAGGTTaGGGCTGCTGCTGGGCTTGT | + |
Preference number: 2 (lower is better) Translates to: AFRPPPQKAQKGVLMPTFRPVAG*GCCWAC Trigger: ACAAGCCCAGCAGCAGCCCCAACCTGCCACCGGCCT...GAAAGTAGGCATGAGTACCCCCTTCTGGGCCTTCTGAGGAGGGGGACGAAATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTGGTGAGGAGCAGTCCTaGGGTAGAGCTGCTGAGGGG | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVGEEQS*GRAAEG Trigger: CCCCTCAGCAGCTCTACCCCAGGACTGCTCCTCACC...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTGCTTCTTGCTATGTCTaGGGAGGGGGAGGGGAGAGG | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVASCYV*GGGGER Trigger: CCTCTCCCCTCCCCCTCCCCAGACATAGCAAGAAGC...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 90 bp | GGCCAGCAAAGTGCCAAGTGTGAACACAGTGACGGAGAGGAGGGCTaGGCACAGACTCCAGTAAGGGGCAGGGCAAGAGCTAGATGTCAG | + |
Preference number: 2 (lower is better) Translates to: GQQSAKCEHSDGEEG*AQTPVRGRARARCQ Trigger: CTGACATCTAGCTCTTGCCCTGCCCCTTACTGGAGTCTGTGCCAAGCCCTCCTCTCCGTCACTGTGTTCACACTTGGCACTTTGCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | GTGAAAAATGCCGTGGGAGACCATTCCCACGGACTGTGGATCAGGTCTCGGTATAGACAGCAGACAGCCTaGTGGGGACGTGGGAAGGGG | + |
Preference number: 2 (lower is better) Translates to: VKNAVGDHSHGLWIRSRYRQQTA*WGRGKG Trigger: CCCCTTCCCACGTCCCCATCAGGCTGTCTGCTGTCT...ATACCGAGACCTGATCCACAGTCCGTGGGAATGGTCTCCCACGGCATTTTTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTGCCTTGAGTCATTCCTaGGGGGAGGGGAGAAGAGAG | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVALSHS*GEGRRE Trigger: CTCTCTTCTCCCCTCCCCCCAGGAATGACTCAAGGC...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | TGTCCTTCCCCCTCACTGCCCACAAGACAACCCCTTGGCCTCAGGTCCCAGGGCTCCTCTCAGAACCACTaGGCTGAAGTAGCTTTGGAA | + |
Preference number: 2 (lower is better) Translates to: CPSPSLPTRQPLGLRSQGSSQNH*AEVALE Trigger: TTCCAAAGCTACTTCAGCCCAGTGGTTCTGAGAGGA...GCCCTGGGACCTGAGGCCAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTGAGGGAGTATGGCTGTaGAAAATGCCGTGGGAGACC | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVEGVWL*KMPWET Trigger: GGTCTCCCACGGCATTTTTCACAGCCATACTCCCTC...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | TTTCTCAGGGCCAGCAAAGTGCCAAGTGTGAACACAGTGACGGAGAGGAGGGCTTGCACCACAGAGCAGTaGCCAGGGAACTGTGCAGAC | + |
Preference number: 2 (lower is better) Translates to: FLRASKVPSVNTVTERRACTTEQ*PGNCAD Trigger: GTCTGCACAGTTCCCTGGTCACTGCTCTGTGGTGCA...AGCCCTCCTCTCCGTCACTGTGTTCACACTTGGCACTTTGCTGGCCCTGAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | TTACACACCCTCAAGATCTGGTGGCCCCTCATCAGAGCTCACTGGAATGACTGTGACAACCAGGCTGTGTaGGTGTGCGTGTGCAGGGGC | + |
Preference number: 2 (lower is better) Translates to: LHTLKIWWPLIRAHWNDCDNQAV*VCVCRG Trigger: GCCCCTGCACACGCACACGCACACAGCCTGGTTGTC...ACAGTCATTCCAGTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGTGTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTCAGAGGCAGAAGCATTaGGGTGTGCTCTGCCCTCTA | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVQRQKH*GVLCPL Trigger: TAGAGGGCAGAGCACACCCCAATGCTTCTGCCTCTG...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | TCCCAGAAGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTCAGGAAGGCCAAGGGTaGGGTGAGGAGCAGTCCTGG | + |
Preference number: 2 (lower is better) Translates to: SQKAKSKGGARSGLESRFQEGQG*GEEQSW Trigger: CCAGGACTGCTCCTCACCTCACCCTTGGCCTTCCTG...AAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCTTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | TCCCAGAAGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGTGTGCGTGTGCGTGTaGAGGGGCCATGGCCTTGAG | + |
Preference number: 2 (lower is better) Translates to: SQKAKSKGGARSGLESRFVCVCV*RGHGLE Trigger: CTCAAGGCCATGGCCCCTGCACACGCACACGCACAC...AAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCTTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | TGCGGCTGTCGTTACCTTTCTCAGGGCCAGCAAAGTGCCAAGTGTGAACACAGTCCTCCCCAACACCCCTaGCTTGCTTACCCAGCCATT | + |
Preference number: 2 (lower is better) Translates to: CGCRYLSQGQQSAKCEHSPPQHP*LAYPAI Trigger: AATGGCTGGGTAAGCAAGCCAGGGGTGTTGGGGAGG...ACTGTGTTCACACTTGGCACTTTGCTGGCCCTGAGAAAGGTAACGACAGCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | CAGCCCATGCCACCCTCAGATGTAGACAGCAGACAGCCTGATGGGGACGTGGGATGGACAACCAGCCTTTaGATTTCAGAGACTCCACTT | + |
Preference number: 2 (lower is better) Translates to: QPMPPSDVDSRQPDGDVGWTTSL*ISETPL Trigger: AAGTGGAGTCTCTGAAATTCAAAGGCTGGTTGTCCA...TCCCACGTCCCCATCAGGCTGTCTGCTGTCTACATCTGAGGGTGGCATGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | CAGCACACAGACAGACACGGATGCACTAGTTTCAGACACAACATGGACCTGTGTCTGAGACCGAGCACGTaGGACCCCCACTTGAAGCCT | + |
Preference number: 2 (lower is better) Translates to: QHTDRHGCTSFRHNMDLCLRPST*DPHLKP Trigger: AGGCTTCAAGTGGGGGTCTCACGTGCTCGGTCTCAG...ACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTGTGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | GTGAAAAATGCCGTGGGAGACCATTCCCACGGACTGTGGATCAGGTCTCGGTATGAGAAGAGCCGGGACTaGTTCAAGTGCACAAGGAGG | + |
Preference number: 2 (lower is better) Translates to: VKNAVGDHSHGLWIRSRYEKSRD*FKCTRR Trigger: CCTCCTTGTGCACTTGAAGCAGTCCCGGCTCTTCTC...ATACCGAGACCTGATCCACAGTCCGTGGGAATGGTCTCCCACGGCATTTTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | GGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCGTGGAAGGAGACAGGTaGCCCTGGAAGGAACAGCAG | + |
Preference number: 2 (lower is better) Translates to: GGARSGLESRFEVQVLSPVEGDR*PWKEQQ Trigger: CTGCTGTTCCTTCCAGGGGCACCTGTCTCCTTCCAC...GGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | TTTCTCAGGGCCAGCAAAGTGCCAAGTGTGAACACAGTGACGGAGAGGAGGGCTGTGACCAGGGAACTGTaGAGACACCCACAAGAACAG | + |
Preference number: 2 (lower is better) Translates to: FLRASKVPSVNTVTERRAVTREL*RHPQEQ Trigger: CTGTTCTTGTGGGTGTCTGCACAGTTCCCTGGTCAC...AGCCCTCCTCTCCGTCACTGTGTTCACACTTGGCACTTTGCTGGCCCTGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | GCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATCCGCAGATCCAAGGATaGCACAACCCGGCGGGCGCT | + |
Preference number: 2 (lower is better) Translates to: ARSGLESRFEVQVLSPNHPQIQG*HNPAGA Trigger: AGCGCCCGCCGGGTTGTGGCATCCTTGGATCTGCGG...ATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | CCAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTGTTAGAAATGCTTCTTaGTATGTCTGGGGAGGGGGA | + |
Preference number: 2 (lower is better) Translates to: PGCCRTPSAEANTVSTVRVRNAS*YVWGGG Trigger: TCCCCCTCCCCAGACATAGCAAGAAGCATTTCTAAC...ACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTAGTAGCTTTGGAAGCTaGAAGGGAATAACAGGTCCC | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVSSFGS*KGITGP Trigger: GGGACCTGTTATTCCCTTTCAGCTTCCAAAGCTACT...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | GCATTTCGTCCCCCTCCTCAGAAGGCCCAGAAGGGGGTACTCATGCCTACTTTCACTCCCAAAGAGGTCTaGAAACAAGGACAAATGGGT | + |
Preference number: 2 (lower is better) Translates to: AFRPPPQKAQKGVLMPTFTPKEV*KQGQMG Trigger: ACCCATTTGTCCTTGTTTGCAGACCTCTTTGGGAGT...GAAAGTAGGCATGAGTACCCCCTTCTGGGCCTTCTGAGGAGGGGGACGAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | TCCCAGAAGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTCCTCTGGTCTCTCATTaGCAGAGGGAGGAAGAAGGG | + |
Preference number: 2 (lower is better) Translates to: SQKAKSKGGARSGLESRFPLVSH*QREEEG Trigger: CCCTTCTTCCTCCCTCTGGCAATGAGAGACCAGAGG...AAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCTTCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | CAGCACACAGACAGACACGGATGCACTAGTTTCAGACACAACATGGACCTGTGTTTAAGTGTCTGCAGCTaGAGACGAGCCAGGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: QHTDRHGCTSFRHNMDLCLSVCS*RRARQC Trigger: GCACTGCCTGGCTCGTCTGCAGCTGCAGACACTTAA...ACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTGTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTTCTGGAAAGTCGATTTaGAGTTCAAGTTCTCTCTCC | + |
Preference number: 2 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVSGKSI*SSSSLS Trigger: GGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGA...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | GCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATGGAGACAGGTGCCCCTaGAAGGAACAGCAGGTGGAA | + |
Preference number: 2 (lower is better) Translates to: ARSGLESRFEVQVLSPNHGDRCP*KEQQVE Trigger: TTCCACCTGCTGTTCCTTCCAGGGGCACCTGTCTCC...ATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCCTGTCCCTGGCACCGTaGGTGCCGCAGGGGAGAGGA | + |
Preference number: 2 (lower is better) Translates to: RVTLIPSIKLRTGIQILILSLAP*VPQGRG Trigger: TCCTCTCCCCTGCGGCACCCACGGTGCCAGGGACAG...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 90 bp | AGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTaGAAGTTCAAGTTCTCTCTCCCAACCATGGGTACCATTCAGGCT | + |
Preference number: 2 (lower is better) Translates to: RLKVRVGLDLVWKVD*KFKFSLPTMGTIQA Trigger: AGCCTGAATGGTACCCATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | GCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATTTGTGCCCCATGAAATaGAGGAGTGGATGGCAGGAC | + |
Preference number: 2 (lower is better) Translates to: ARSGLESRFEVQVLSPNHLCPMK*RSGWQD Trigger: GTCCTGCCATCCACTCCTGCATTTCATGGGGCACAA...ATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | TTACACACCCTCAAGATCTGGTGGCCCCTCATCAGAGCTCACTGGAATGACTGTAGTCGATGGGAAATATaGGGATTAGATTTGCGGCTG | + |
Preference number: 2 (lower is better) Translates to: LHTLKIWWPLIRAHWNDCSRWEI*GLDLRL Trigger: CAGCCGCAAATCTAATCCGCATATTTCCCATCGACT...ACAGTCATTCCAGTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGTGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 90 bp | ACATCAATCAGATTACGGAGTCGATGGGAAATATGCGGATTAGATTaGCGGCTGTCGTTACCTTTCTCAGGGCCAGCAAAGTGCCAAGTG | + |
Preference number: 2 (lower is better) Translates to: TSIRLRSRWEICGLD*RLSLPFSGPAKCQV Trigger: CACTTGGCACTTTGCTGGCCCTGAGAAAGGTAACGACAGCCGCAAATCTAATCCGCATATTTCCCATCGACTCCGTAATCTGATTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | AGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCGTTTCTAGAAAGACTTaGCAGCCTCCTGCTAGTCAG | + |
Preference number: 2 (lower is better) Translates to: RLKVRVGLDLVWKVDLKFVSRKT*QPPASQ Trigger: CTGACTAGCAGGAGGCTGGCAAGTCTTTCTAGAAAC...GAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 90 bp | TCTCTCTCTGTCTCTCTCTCTCTCTCTTTCTCACGAAATTCTGCATaGTCAAAGCTGATGCTGCCTGCTTTAGCTAGGTATGCCCAGGAT | + |
Preference number: 2 (lower is better) Translates to: SLSVSLSLSFSRNSA*SKLMLPALARYAQD Trigger: ATCCTGGGCATACCTAGCTAAAGCAGGCAGCATCAGCTTTGACAATGCAGAATTTCGTGAGAAAGAGAGAGAGAGAGAGACAGAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR GCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCGTCCTTCCCCCTCACTaGCCACAAGACAACCCCTTG | + |
Preference number: 2 (lower is better) Translates to: RVTLIPSIKLRTGIQILIVLPPH*PQDNPL Trigger: CAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGAC...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCCATGAAATGCAGGAGTaGATGGCAGGACCCACCCCG | + |
Preference number: 2 (lower is better) Translates to: RVTLIPSIKLRTGIQILIHEMQE*MAGPTP Trigger: CGGGGTGGGTCCTGCCATCCACTCCTGCATTTCATG...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCACCCTCAAGATCTGGTaGCCCCTCATCAGAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: RVTLIPSIKLRTGIQILITLKIW*PLIRAH Trigger: GTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGT...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 90 bp | TTGGGCTTTTGTTTCTCCTCAATGACTTGTTCCCTTTTGAACAAATaGCACGTAAGTCCACTGCGCACAGAAGCAATACATTTCCCATTG | + |
Preference number: 2 (lower is better) Translates to: LGFCFSSMTCSLLNK*HVSPLRTEAIHFPL Trigger: CAATGGGAAATGTATTGCTTCTGTGCGCAGTGGACTTACGTGCAATTTGTTCAAAAGGGAACAAGTCATTGAGGAGAAACAAAAGCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR TCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCAAAACCTGCTCCTGTTaGGGAATTAAGTGTCTGCAG | + |
Preference number: 2 (lower is better) Translates to: RVTLIPSIKLRTGIQILIKTCSC*GIKCLQ Trigger: CTGCAGACACTTAATTCCTCAACAGGAGCAGGTTTT...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | TGTGGTCCTGAACGGACAGCTCCCACCCCACCCGTCTaGGTGCAAGTGGTCTGGGGTCCGCATTGGCAGGGG | + |
Preference number: 3 (lower is better) Translates to: CGPERTAPTPPV*VQVVWGPHWQG Trigger: CCCCTGCCAATGCGGACCCCAGACCACTTGCACCCAGACGGGTGGGGTGGGAGCTGTCCGTTCAGGACCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CAA 90 bp | CCTGTCCTTCCCCCTCACTGCCCACAAGACAACCCCTTGGCCTCAGGTCCCAGGGGGCTGCTGCTGGGCTaGTGCCCCATGAAATGCAGG | + |
Preference number: 3 (lower is better) Translates to: PVLPPHCPQDNPLASGPRGLLLG*CPMKCR Trigger: CCTGCATTTCATGGGGCACAAGCCCAGCAGCAGCCC...CCTGGGACCTGAGGCCAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | TGGGGTGTGCTCTGCCCTCTAAGCCAGGGCAGAGGATaGCTTGTGGTCCTGAACGGACAGCTCCCACCCCAC | + |
Preference number: 3 (lower is better) Translates to: WGVLCPLSQGRG*LVVLNGQLPPH Trigger: GTGGGGTGGGAGCTGTCCGTTCAGGACCACAAGCCATCCTCTGCCCTGGCTTAGAGGGCAGAGCACACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 72 bp | GACAGCAGACAGCCTGATGGGGACGTGGGAAGGGGCTaGTTGGTAGGTGGTGCCATCCCTGGACAACCAGCC | + |
Preference number: 3 (lower is better) Translates to: DSRQPDGDVGRG*LVGGAIPGQPA Trigger: GGCTGGTTGTCCAGGGATGGCACCACCTACCAATCAGCCCCTTCCCACGTCCCCATCAGGCTGTCTGCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 72 bp | AGGACAAATGGGTGGTCCAGGAAGCCGCACCAGCCCTaGGGCACACAGGCAGCCGACCCATCAGGAAACTTA | + |
Preference number: 3 (lower is better) Translates to: RTNGWSRKPHQP*GTQAADPSGNL Trigger: TAAGTTTCCTGATGGGTCGGCTGCCTGTGTGCCTCAGGGCTGGTGCGGCTTCCTGGACCACCCATTTGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 72 bp | CTGCTTCAAGTGCACAAGGAGGACAACCAGGCTGTGTaGGTGTGCGTGTGCAGGGGCCATGGCCTTGAGTCA | + |
Preference number: 3 (lower is better) Translates to: LLQVHKEDNQAV*VCVCRGHGLES Trigger: TGACTCAAGGCCATGGCCCCTGCACACGCACACGCACACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | GCTTACAATTCAAGTGAGCTCTCAGCCCCTAGGGCCTaGGAGCCTCCGTGGCAGCTCTACCACCCTAATGCC | + |
Preference number: 3 (lower is better) Translates to: AYNSSELSAPRA*EPPWQLYHPNA Trigger: GGCATTAGGGTGGTAGAGCTGCCACGGAGGCTCCCAGGCCCTAGGGGCTGAGAGCTCACTTGAATTGTAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 72 bp | AAAAAGCCACTGCTGGACAACGGGTGGAGCACAGCCTaGTCCGCACCCTCAGAGAGGATGCACCACAGAGCA | + |
Preference number: 3 (lower is better) Translates to: KKPLLDNGWSTA*SAPSERMHHRA Trigger: TGCTCTGTGGTGCATCCTCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTGGCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 72 bp | AGGTCTCGGTATTCTCTAGCGCTGAGACCGAGCACGTaGGACCCCCACTTGAAGCCTCTGGTCTCTCATTGC | + |
Preference number: 3 (lower is better) Translates to: RSRYSLALRPST*DPHLKPLVSHC Trigger: GCAATGAGAGACCAGAGGCTTCAAGTGGGGGTCTCACGTGCTCGGTCTCAGCGCTAGAGAATACCGAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR TCA 72 bp | ACGCGTCAGACCAAGGGAGCAAGGGACACACCACCCTaGGGAACATGCAAACACAGAAGATCCCCGCAGATC | + |
Preference number: 3 (lower is better) Translates to: TRQTKGARDTPP*GTCKHRRSPQI Trigger: GATCTGCGGGGATCTTCTGTGTTTGCATGTTCCTCAGGGTGGTGTGTCCCTTGCTCCCTTGGTCTGACGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 72 bp | ACATGCAAACACAGAAGATCCCCGCAGATCCAAGGATaGCACAACCCGGCGGGCGCTGAGGAAGCACAATTA | + |
Preference number: 3 (lower is better) Translates to: TCKHRRSPQIQG*HNPAGAEEAQL Trigger: TAATTGTGCTTCCTCAGCGCCCGCCGGGTTGTGGCATCCTTGGATCTGCGGGGATCTTCTGTGTTTGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 72 bp | GGTGGAAAACCTGCTCCTGTTGAGGAATTAAGTGTCTaGAGCTGCAGACGAGCCAGGCAGTGCGTAGGTTTC | + |
Preference number: 3 (lower is better) Translates to: GGKPAPVEELSV*SCRRARQCVGF Trigger: GAAACCTACGCACTGCCTGGCTCGTCTGCAGCTGCAGACACTTAATTCCTCAACAGGAGCAGGTTTTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 72 bp | GCGCTGAGGAAGCACAATTATCTAAGAAAAAGCCACTaGTGGACAACGGGTGGAGCACAGCCTGATCCGCAC | + |
Preference number: 3 (lower is better) Translates to: ALRKHNYLRKSH*WTTGGAQPDPH Trigger: GTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTGGCTTTTTCTTAGATAATTGTGCTTCCTCAGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | CAGACAGACACGGATGCACTAGTTTCAGACACAACATaGACCTGTGTGGAAGGAGACAGGTGCCCCTGGAAG | + |
Preference number: 3 (lower is better) Translates to: QTDTDALVSDTT*TCVEGDRCPWK Trigger: CTTCCAGGGGCACCTGTCTCCTTCCACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR-3UTR CAA 90 bp | CTCTCTCTCTTTCTCACGAAATTCTGCATTGTCAAAGCTGATGCTGCCTGCTTTGAGAAGGGGGTGTCCTaGGGGGCCAGAGAAGAGCCG | + |
Preference number: 3 (lower is better) Translates to: LSLFLTKFCIVKADAACFEKGVS*GAREEP Trigger: CGGCTCTTCTCTGGCCCCCAAGGACACCCCCTTCTC...AAAGCAGGCAGCATCAGCTTTGACAATGCAGAATTTCGTGAGAAAGAGAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | CTGAGGAAGCACAATTATCTAAGAAAAAGCCACTGCTaGACAACGGGTGGAGCACAGCCTGATCCGCACCCT | + |
Preference number: 3 (lower is better) Translates to: LRKHNYLRKSHC*TTGGAQPDPHP Trigger: AGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTGGCTTTTTCTTAGATAATTGTGCTTCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | CTCAACCTAGATGTTAGAAATGCTTCTTGCTATGTCTaGGGAGGGGGAGGGGAGAGGCATGTTGATCTCTCT | + |
Preference number: 3 (lower is better) Translates to: LNLDVRNASCYV*GGGGERHVDLS Trigger: AGAGAGATCAACATGCCTCTCCCCTCCCCCTCCCCAGACATAGCAAGAAGCATTTCTAACATCTAGGTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | AGAAGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTaGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCA | + |
Preference number: 3 (lower is better) Translates to: RRLKVRVGLDLV*KVDLKFKFSLP Trigger: TGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | GTGCAAGAGGGAACATCAATCAGATTACGGAGTCGATaGGAAATATGCGGATTAGATTTGCGGCTGTCGTTA | + |
Preference number: 3 (lower is better) Translates to: VQEGTSIRLRSR*EICGLDLRLSL Trigger: TAACGACAGCCGCAAATCTAATCCGCATATTTCCCATCGACTCCGTAATCTGATTGATGTTCCCTCTTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR GCA 72 bp | GGAACATCAATCAGATTACGGAGTCGATGGGAAATATaGGGATTAGATTTGCGGCTGTCGTTACCTTTCTCA | + |
Preference number: 3 (lower is better) Translates to: GTSIRLRSRWEI*GLDLRLSLPFS Trigger: TGAGAAAGGTAACGACAGCCGCAAATCTAATCCGCATATTTCCCATCGACTCCGTAATCTGATTGATGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | AGCAAGGATACCAGTATAAATAGTGCACTTCCAGAATaGCTGATGGGTGTGGTTTACCCCTTTGATACTCAA | + |
Preference number: 3 (lower is better) Translates to: SKDTSINSALPE*LMGVVYPFDTQ Trigger: TTGAGTATCAAAGGGGTAAACCACACCCATCAGCCATTCTGGAAGTGCACTATTTATACTGGTATCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CCA 72 bp | CAGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTaGTATCCAAATTCTTATCTCCTTCCATATAACCTT | + |
Preference number: 3 (lower is better) Translates to: QSDPNSFYQAQN*YPNSYLLPYNL Trigger: AAGGTTATATGGAAGGAGATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGCAGCGCACAGGTGCGTaGGGCGCGGCCGGCCAGCAT | + |
Preference number: 4 (lower is better) Translates to: GGGEKRDDGSPHKQGGQAQRTGA*GAAGQH Trigger: ATGCTGGCCGGCCGCGCCGCACGCACCTGTGCGCTG...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | CTGGGGCTGGTGGCAGGGGTTGGCAGGAGTACACCGGGCATAGCCGGCTCTGGGGTCGGCCCGAAATCTTaGGCCCCACTGCCCAGGAGG | + |
Preference number: 4 (lower is better) Translates to: LGLVAGVGRSTPGIAGSGVGPKS*APLPRR Trigger: CCTCCTGGGCAGTGGGGCCCAAGATTTCGGGCCGAC...CCCAGAGCCGGCTATGCCCGGTGTACTCCTGCCAACCCCTGCCACCAGCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGGCACCGAAGTGCAGATaGAGCGGGTCGGCCCGAAAT | + |
Preference number: 4 (lower is better) Translates to: GGGEKRDDGSPHKQGGQAAPKCR*SGSARN Trigger: ATTTCGGGCCGACCCGCTTCATCTGCACTTCGGTGC...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGACTCAGCCCAGGCGATaGCATTGCCAGAGAGAGCCT | + |
Preference number: 4 (lower is better) Translates to: GGGEKRDDGSPHKQGGQATQPRR*HCQREP Trigger: AGGCTCTCTCTGGCAATGTCATCGCCTGGGCTGAGT...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGAGCTCGCTGATCCGTTaGTGTAGGGAGGTCAAGGCG | + |
Preference number: 4 (lower is better) Translates to: GGGEKRDDGSPHKQGGQASSLIR*CREVKA Trigger: CGCCTTGACCTCCCTACACCAACGGATCAGCGAGCT...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGTCTGCAGCAGATCCTTaGGGCTGTTGGTTTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: GGGEKRDDGSPHKQGGQASAADP*GCWFGW Trigger: CCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGA...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | CACTGCTGGACAACGGGTGGAGCACAGCCTGATCCGCACCCTCAGAGAGGATGCACGGTCTCGCGGAGCTaGAGCACGTTGCTCCGAAGC | + |
Preference number: 4 (lower is better) Translates to: HCWTTGGAQPDPHPQRGCTVSRS*STLLRS Trigger: GCTTCGGAGCAACGTGCTGCAGCTCCGCGAGACCGT...GCATCCTCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | GCCAGAGAAGAGCCGGGACTGCTTCAAGTGCACAAGGAGGACAACCAGGCTGTGGACCCGAGTCCAGGGTaGTCTGGCTCTCGCAGCGGC | + |
Preference number: 4 (lower is better) Translates to: AREEPGLLQVHKEDNQAVDPSPG*SGSRSG Trigger: GCCGCTGCGAGAGCCAGAGCACCCTGGACTCGGGTC...CACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAGTCCCGGCTCTTCTCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGAGAGAGCCTTGCTGCTaGAGGTGGCCAGGTTGTACA | + |
Preference number: 4 (lower is better) Translates to: GGGEKRDDGSPHKQGGQAREPCC*RWPGCT Trigger: TGTACAACCTGGCCACCTGCAGCAGCAAGGCTCTCT...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | GCTTGTGGTCCTGAACGGACAGCTCCCACCCCACCCGTCTGGGTGCAAGTGGTCAAAGTTTGCCCGAGTTaGCTGAGCGTCTCCGCGGCC | + |
Preference number: 4 (lower is better) Translates to: ACGPERTAPTPPVWVQVVKVCPS*LSVSAA Trigger: GGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTT...GACCACTTGCACCCAGACGGGTGGGGTGGGAGCTGTCCGTTCAGGACCACAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | CAGGAGTGGATGGCAGGACCCACCCCGGCCAGCAGGCTCCACATGAGAGGTTTCCCTTGCTGCTGCAGGTaGCCAGGTTGTACACCTCCC | + |
Preference number: 4 (lower is better) Translates to: QEWMAGPTPASRLHMRGFPCCCR*PGCTPP Trigger: GGGAGGTGTACAACCTGGCCACCTGCAGCAGCAAGG...GAAACCTCTCATGTGGAGCCTGCTGGCCGGGGTGGGTCCTGCCATCCACTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | CACTGCTGGACAACGGGTGGAGCACAGCCTGATCCGCACCCTCAGAGAGGATGCCAGAGAGAGCCTTGCTaGTGCAGGTGGCCAGGTTGT | + |
Preference number: 4 (lower is better) Translates to: HCWTTGGAQPDPHPQRGCQREPC*CRWPGC Trigger: ACAACCTGGCCACCTGCAGCAGCAAGGCTCTCTCTG...GCATCCTCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | TGTCCTTCCCCCTCACTGCCCACAAGACAACCCCTTGGCCTCAGGTCCCAGGGCAGGCGCTCTCGATCTTaGCCCTTTCCTCTGTGTCGT | + |
Preference number: 4 (lower is better) Translates to: CPSPSLPTRQPLGLRSQGRRSRS*PFPLCR Trigger: ACGACACAGAGGAAAGGGCCAAGATCGAGAGCGCCT...GCCCTGGGACCTGAGGCCAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | CTGGGGCTGGTGGCAGGGGTTGGCAGGAGTACACCGGGCATAGCCGGCTCTGGGGTAGTTGGTCCGCAGTaGGAATGTCAGCTGAAACTT | + |
Preference number: 4 (lower is better) Translates to: LGLVAGVGRSTPGIAGSGVVGPQ*ECQLKL Trigger: AAGTTTCAGCTGACATTCCCACTGCGGACCAACTAC...CCCAGAGCCGGCTATGCCCGGTGTACTCCTGCCAACCCCTGCCACCAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | CACTGCTGGACAACGGGTGGAGCACAGCCTGATCCGCACCCTCAGAGAGGATGCCACCAGCACGCCCTGTaGTTTGATGGGGTGATAGGG | + |
Preference number: 4 (lower is better) Translates to: HCWTTGGAQPDPHPQRGCHQHAL*FDGVIG Trigger: CCCTATCACCCCATCAAACCACAGGGCGTGCTGGTG...GCATCCTCTCTGAGGGTGCGGATCAGGCTGTGCTCCACCCGTTGTCCAGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | AGGGGGTACTCATGCCTACTTTCAATAAGGAAAAGCCACGGGCTCAGTGTCTCATTTGCCCGAGTTGGCTaGGCGTCTCCGCGGCCGGCG | + |
Preference number: 4 (lower is better) Translates to: RGYSCLLSIRKSHGLSVSFARVG*ASPRPA Trigger: CGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAA...TGAGACACTGAGCCCGTGGCTTTTCCTTATTGAAAGTAGGCATGAGTACCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | CCTGTCCTTCCCCCTCACTGCCCACAAGACAACCCCTTGGCCTCAGGTCCCAGGAGAGATTGCAAAGTTTaGCCGAGTTGGCTGAGCGTC | + |
Preference number: 4 (lower is better) Translates to: PVLPPHCPQDNPLASGPRRDCKV*PSWLSV Trigger: GACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCT...CCTGGGACCTGAGGCCAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | CCTGTCCTTCCCCCTCACTGCCCACAAGACAACCCCTTGGCCTCAGGTCCCAGGCGGGTTTTGAGAGATTaGAAAGTTTGCCCGAGTTGG | + |
Preference number: 4 (lower is better) Translates to: PVLPPHCPQDNPLASGPRRVLRD*KVCPSW Trigger: CCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCG...CCTGGGACCTGAGGCCAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | GCATTTCGTCCCCCTCCTCAGAAGGCCCAGAAGGGGGTACTCATGCCTACTTTCGGGCGATTGTCTTTCTaGCCTTTCTCCAGCTCGCTG | + |
Preference number: 4 (lower is better) Translates to: AFRPPPQKAQKGVLMPTFGRLSF*PFSSSL Trigger: CAGCGAGCTGGAGAAAGGTCAGAAAGACAATCGCCC...GAAAGTAGGCATGAGTACCCCCTTCTGGGCCTTCTGAGGAGGGGGACGAAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTTGCGGTCCCAGATGTTaGAATGGGCTAGCTCACCCA | + |
Preference number: 4 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVCGPRC*NGLAHP Trigger: TGGGTGAGCTAGCCCATTTCAACATCTGGGACCGCA...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | CAGCACACAGACAGACACGGATGCACTAGTTTCAGACACAACATGGACCTGTGTGAGTCCAGGGTGCTCTaGCTCTCGCAGCGGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: QHTDRHGCTSFRHNMDLCESRVL*LSQRPS Trigger: GCTTGGCCGCTGCGAGAGCCAGAGCACCCTGGACTC...ACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTGTGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | CTCTCTCTCTTTCTCACGAAATTCTGCATTGTCAAAGCTGATGCTGCCTGCTTTTTGCCCGAGCCAGGCTaGTTGCGGCCGCCTCCCGAC | + |
Preference number: 4 (lower is better) Translates to: LSLFLTKFCIVKADAACFLPEPG*LRPPPD Trigger: GTCGGGAGGCGGCCGCAAGCAGCCTGGCTCGGGCAA...AAAGCAGGCAGCATCAGCTTTGACAATGCAGAATTTCGTGAGAAAGAGAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | TTACACACCCTCAAGATCTGGTGGCCCCTCATCAGAGCTCACTGGAATGACTGTTGCCAGAGAGAGCCTTaGTGCTGCAGGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: LHTLKIWWPLIRAHWNDCCQREP*CCRWPG Trigger: ACCTGGCCACCTGCAGCAGCAAGGCTCTCTCTGGCA...ACAGTCATTCCAGTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGTGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | GCCAGAGAAGAGCCGGGACTGCTTCAAGTGCACAAGGAGGACAACCAGGCTGTGCCACAAATGCTTGGGTaGCATCAAACCCTCCACCTA | + |
Preference number: 4 (lower is better) Translates to: AREEPGLLQVHKEDNQAVPQMLG*HQTLHL Trigger: TAGGTGGAGGGTTTGATGCCACCCAAGCATTTGTGG...CACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAGTCCCGGCTCTTCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | TTTCTCAGGGCCAGCAAAGTGCCAAGTGTGAACACAGTGACGGAGAGGAGGGCTCCAAAGATCTCGATCTaGGACTCAGCCCAGGCGATG | + |
Preference number: 4 (lower is better) Translates to: FLRASKVPSVNTVTERRAPKISI*DSAQAM Trigger: CATCGCCTGGGCTGAGTCCCAGATCGAGATCTTTGG...AGCCCTCCTCTCCGTCACTGTGTTCACACTTGGCACTTTGCTGGCCCTGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | GGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCCCCGGGTGGTCCAGGTaGCACAGATGTGATGCCATT | + |
Preference number: 4 (lower is better) Translates to: GGARSGLESRFEVQVLSPPGWSR*HRCDAI Trigger: AATGGCATCACATCTGTGTCACCTGGACCACCCGGG...GGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | AGGGGGTACTCATGCCTACTTTCAATAAGGAAAAGCCACGGGCTCAGTGTCTCAGCACGCCCTGTGGTTTaGTGGGGTGATAGGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: RGYSCLLSIRKSHGLSVSARPVV*WGDRVP Trigger: TGGCACCCTATCACCCCATCAAACCACAGGGCGTGC...TGAGACACTGAGCCCGTGGCTTTTCCTTATTGAAAGTAGGCATGAGTACCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | GCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATCGCCCATCGTGTTCTTaGCCGAGCCAGGCTGCTTGC | + |
Preference number: 4 (lower is better) Translates to: ARSGLESRFEVQVLSPNHRPSCS*PSQAAC Trigger: GCAAGCAGCCTGGCTCGGGCAAGAACACGATGGGCG...ATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | GGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCTTTGGCTGGAAGAATTaGGGCGGCTGTACTGCTCGA | + |
Preference number: 4 (lower is better) Translates to: GGARSGLESRFEVQVLSPFGWKN*GGCTAR Trigger: TCGAGCAGTACAGCCGCCTCAATTCTTCCAGCCAAA...GGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | CAGCACACAGACAGACACGGATGCACTAGTTTCAGACACAACATGGACCTGTGTGCCACATGCACACGGTaGAGGCATACATCTCTGGCA | + |
Preference number: 4 (lower is better) Translates to: QHTDRHGCTSFRHNMDLCATCTR*RHTSLA Trigger: TGCCAGAGATGTATGCCTTCACCGTGTGCATGTGGC...ACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTGTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | TTACACACCCTCAAGATCTGGTGGCCCCTCATCAGAGCTCACTGGAATGACTGTGATGGGGTGATAGGGTaGCAAGTTCTCTCCATTGCC | + |
Preference number: 4 (lower is better) Translates to: LHTLKIWWPLIRAHWNDCDGVIG*QVLSIA Trigger: GGCAATGGAGAGAACTTGGCACCCTATCACCCCATC...ACAGTCATTCCAGTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGTGTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | ATGCTGCCTGCTTTAGCTAGGTATGCCCAGGATATAGTGGGGCCCCTAGAGAGATCTCCAGTCGGGTTTTaGGAGATTGCAAAGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: MLPALARYAQDIVGPLERSPVGF*EIAKFA Trigger: GGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGA...TCTCTCTAGGGGCCCCACTATATCCTGGGCATACCTAGCTAAAGCAGGCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | GTGAAAAATGCCGTGGGAGACCATTCCCACGGACTGTGGATCAGGTCTCGGTATGGCTCTTCTTCACCTTaGCATACATGTAGTTGGTCC | + |
Preference number: 4 (lower is better) Translates to: VKNAVGDHSHGLWIRSRYGSSSP*HTCSWS Trigger: GGACCAACTACATGTATGCCAAGGTGAAGAAGAGCC...ATACCGAGACCTGATCCACAGTCCGTGGGAATGGTCTCCCACGGCATTTTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | ATGCTGCCTGCTTTAGCTAGGTATGCCCAGGATATAGTGGGGCCCCTAGAGAGAGAAGGCATACATCTCTaGCAGGCTCTTCTTCACCTT | + |
Preference number: 4 (lower is better) Translates to: MLPALARYAQDIVGPLEREGIHL*QALLHL Trigger: AAGGTGAAGAAGAGCCTGCCAGAGATGTATGCCTTC...TCTCTCTAGGGGCCCCACTATATCCTGGGCATACCTAGCTAAAGCAGGCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 72 bp | GTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTaGAAGTTCAAGTTCTCTCTCCCAACCATGGGTACC | + |
Preference number: 4 (lower is better) Translates to: VRVGLDLVWKVD*KFKFSLPTMGT Trigger: GGTACCCATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR GCA 90 bp | CAGCACACAGACAGACACGGATGCACTAGTTTCAGACACAACATGGACCTGTGTTCATCGATCTTGCTCTaGAGCAGATCCTTGAGGCTG | + |
Preference number: 4 (lower is better) Translates to: QHTDRHGCTSFRHNMDLCSSILL*SRSLRL Trigger: CAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGA...ACACAGGTCCATGTTGTGTCTGAAACTAGTGCATCCGTGTCTGTCTGTGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | GGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCTGGCATACATGTAGTTaGTCCGCAGTGGGAATGTCA | + |
Preference number: 4 (lower is better) Translates to: GGARSGLESRFEVQVLSPWHTCS*SAVGMS Trigger: TGACATTCCCACTGCGGACCAACTACATGTATGCCA...GGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | GCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATCTGATGGTCTCCTTCTaGCTGAGGATGGTCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: ARSGLESRFEVQVLSPNHLMVSF*LRMVSF Trigger: GAAGGAGACCATCCTCAGCCAGAAGGAGACCATCAG...ATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 72 bp | AGATTACGGAGTCGATGGGAAATATGCGGATTAGATTaGCGGCTGTCGTTACCTTTCTCAGGGCCAGCAAAG | + |
Preference number: 4 (lower is better) Translates to: RLRSRWEICGLD*RLSLPFSGPAK Trigger: CTTTGCTGGCCCTGAGAAAGGTAACGACAGCCGCAAATCTAATCCGCATATTTCCCATCGACTCCGTAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | TCCCAGAAGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTTCCCAGATGTTGAAATaGGCTAGCTCACCCACAAAT | + |
Preference number: 4 (lower is better) Translates to: SQKAKSKGGARSGLESRFSQMLK*ASSPTN Trigger: ATTTGTGGGTGAGCTAGCCCATTTCAACATCTGGGA...AAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCTTCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR TCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCAGTGGGAATGTCAGCTaGAACTTGTCTCCGGGGCGA | + |
Preference number: 4 (lower is better) Translates to: RVTLIPSIKLRTGIQILISGNVS*NLSPGR Trigger: TCGCCCCGGAGACAAGTTTCAGCTGACATTCCCACT...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 72 bp | GTCTCTCTCTCTCTCTCTTTCTCACGAAATTCTGCATaGTCAAAGCTGATGCTGCCTGCTTTAGCTAGGTAT | + |
Preference number: 4 (lower is better) Translates to: VSLSLSFSRNSA*SKLMLPALARY Trigger: ATACCTAGCTAAAGCAGGCAGCATCAGCTTTGACAATGCAGAATTTCGTGAGAAAGAGAGAGAGAGAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CCA 90 bp | AGAGTGACCCTAATTCCTTCTATCAAGCTCAGAACTGGTATCCAAATTCTTATCCGAATGTCCACTTGGTaGCTCCACCAAAGATCTCGA | + |
Preference number: 4 (lower is better) Translates to: RVTLIPSIKLRTGIQILIRMSTW*LHQRSR Trigger: TCGAGATCTTTGGTGGAGCCACCAAGTGGACATTCG...GATAAGAATTTGGATACCAGTTCTGAGCTTGATAGAAGGAATTAGGGTCACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 72 bp | TTGGGCTTTTGTTTCTCCTCAATGACTTGTTCCCTTTaGAACAAATTGCACGTAAGTCCACTGCGCACAGAA | + |
Preference number: 4 (lower is better) Translates to: LGFCFSSMTCSL*NKLHVSPLRTE Trigger: TTCTGTGCGCAGTGGACTTACGTGCAATTTGTTCAAAAGGGAACAAGTCATTGAGGAGAAACAAAAGCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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3UTR CAA 72 bp | TGTTTCTCCTCAATGACTTGTTCCCTTTTGAACAAATaGCACGTAAGTCCACTGCGCACAGAAGCAATACAT | + |
Preference number: 4 (lower is better) Translates to: CFSSMTCSLLNK*HVSPLRTEAIH Trigger: ATGTATTGCTTCTGTGCGCAGTGGACTTACGTGCAATTTGTTCAAAAGGGAACAAGTCATTGAGGAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 90 bp | AAGCTCCTCCGCGCCGCCCGCAGCCACGGACGCGGCACACATGTCTaGATCCACCGGCACCGAAGTGCAGATGAAGCGGGTCGGCCCGAA | + |
Preference number: 5 (lower is better) Translates to: KLLRAARSHGRGTHV*IHRHRSADEAGRPE Trigger: TTCGGGCCGACCCGCTTCATCTGCACTTCGGTGCCGGTGGATGCAGACATGTGTGCCGCGTCCGTGGCTGCGGGCGGCGCGGAGGAGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 90 bp | CGGACGCGGCACACATGTCTGCATCCACCGGCACCGAAGTGCAGATaGAGCGGGTCGGCCCGAAATCTTGGGCCCCACTGCCCAGGAGGC | + |
Preference number: 5 (lower is better) Translates to: RTRHTCLHPPAPKCR*SGSARNLGPHCPGG Trigger: GCCTCCTGGGCAGTGGGGCCCAAGATTTCGGGCCGACCCGCTTCATCTGCACTTCGGTGCCGGTGGATGCAGACATGTGTGCCGCGTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | GGGGGAGGGGAGAAGAGAGACGATGGGTCACCGCACAAGCAGGGTGGGCAGGCGTCGCAGCGGCCAAGCTaGGTGGTCAGCTCCCTGATG | + |
Preference number: 5 (lower is better) Translates to: GGGEKRDDGSPHKQGGQASQRPS*VVSSLM Trigger: CATCAGGGAGCTGACCACCAAGCTTGGCCGCTGCGA...CGCCTGCCCACCCTGCTTGTGCGGTGACCCATCGTCTCTCTTCTCCCCTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | CCAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTCGGAGCTGCAGCACGTaGCTCCGAAGCTCCTCCGCG | + |
Preference number: 5 (lower is better) Translates to: PGCCRTPSAEANTVSTVRRSCST*LRSSSA Trigger: CGCGGAGGAGCTTCGGAGCAACGTGCTGCAGCTCCG...ACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | TGTCCTTCCCCCTCACTGCCCACAAGACAACCCCTTGGCCTCAGGTCCCAGGGCATGAGGACCAGTTCGTaGGCCTGCCCAGGCACAGCA | + |
Preference number: 5 (lower is better) Translates to: CPSPSLPTRQPLGLRSQGMRTSS*ACPGTA Trigger: TGCTGTGCCTGGGCAGGCCAACGAACTGGTCCTCAT...GCCCTGGGACCTGAGGCCAAGGGGTTGTCTTGTGGGCAGTGAGGGGGAAGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 90 bp | GGGCCCCCTTTCCCCTCCTCCAGAGTGTTCACCCGAGACAGCACCTaGCGCTCCAGGTCATCGATCTTGCTCTGCAGCAGATCCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: GPPFPSSRVFTRDST*RSRSSILLCSRSLR Trigger: CCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGCGGCAGGTGCTGTCTCGGGTGAACACTCTGGAGGAGGGGAAAGGGGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 90 bp | AGGTTCTCCAGTCGGGTTTTGAGAGATTGCAAAGTTTGCCCGAGTTaGCTGAGCGTCTCCGCGGCCGGCGTCCGGGACAGGTCGCCCATC | + |
Preference number: 5 (lower is better) Translates to: RFSSRVLRDCKVCPS*LSVSAAGVRDRSPI Trigger: GATGGGCGACCTGTCCCGGACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 90 bp | TACTGCTCGAGGTTCTCCAGTCGGGTTTTGAGAGATTGCAAAGTTTaGCCGAGTTGGCTGAGCGTCTCCGCGGCCGGCGTCCGGGACAGG | + |
Preference number: 5 (lower is better) Translates to: YCSRFSSRVLRDCKV*PSWLSVSAAGVRDR Trigger: CCTGTCCCGGACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 90 bp | AGGCGGCTGTACTGCTCGAGGTTCTCCAGTCGGGTTTTGAGAGATTaGAAAGTTTGCCCGAGTTGGCTGAGCGTCTCCGCGGCCGGCGTC | + |
Preference number: 5 (lower is better) Translates to: RRLYCSRFSSRVLRD*KVCPSWLSVSAAGV Trigger: GACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTACAGCCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 90 bp | AGGTCAAGGCGCTCTCGATCTTGGCCCTTTCCTCTGTGTCGTTCTTaGGGCCCCCTTTCCCCTCCTCCAGAGTGTTCACCCGAGACAGCA | + |
Preference number: 5 (lower is better) Translates to: RSRRSRSWPFPLCRS*GPLSPPPECSPETA Trigger: TGCTGTCTCGGGTGAACACTCTGGAGGAGGGGAAAGGGGGCCCCAAGAACGACACAGAGGAAAGGGCCAAGATCGAGAGCGCCTTGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | CTGGGGCTGGTGGCAGGGGTTGGCAGGAGTACACCGGGCATAGCCGGCTCTGGGTTCTCCAGTCGGGTTTaGAGAGATTGCAAAGTTTGC | + |
Preference number: 5 (lower is better) Translates to: LGLVAGVGRSTPGIAGSGFSSRV*RDCKVC Trigger: GCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAA...CCCAGAGCCGGCTATGCCCGGTGTACTCCTGCCAACCCCTGCCACCAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 90 bp | TGGTGGCTCCACCAAAGATCTCGATCTGGGACTCAGCCCAGGCGATaGCATTGCCAGAGAGAGCCTTGCTGCTGCAGGTGGCCAGGTTGT | + |
Preference number: 5 (lower is better) Translates to: WWLHQRSRSGTQPRR*HCQREPCCCRWPGC Trigger: ACAACCTGGCCACCTGCAGCAGCAAGGCTCTCTCTGGCAATGTCATCGCCTGGGCTGAGTCCCAGATCGAGATCTTTGGTGGAGCCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | CAGGGTGCTGTCGGACACCATCGGCAGAAGCAAACACTGTCTCGACAGTGCGTTTCCCCGGGGGTCAGCTaGCGGTCCCAGATGTTGAAA | + |
Preference number: 5 (lower is better) Translates to: QGAVGHHRQKQTLSRQCVSPGVS*RSQMLK Trigger: TTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGA...AACGCACTGTCGAGACAGTGTTTGCTTCTGCCGATGGTGTCCGACAGCACCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | TTACACACCCTCAAGATCTGGTGGCCCCTCATCAGAGCTCACTGGAATGACTGTCTGCAGGTGGCCAGGTaGTACACCTCCCCGGGGGTC | + |
Preference number: 5 (lower is better) Translates to: LHTLKIWWPLIRAHWNDCLQVAR*YTSPGV Trigger: GACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAG...ACAGTCATTCCAGTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGTGTGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | ATGCTGCCTGCTTTAGCTAGGTATGCCCAGGATATAGTGGGGCCCCTAGAGAGACAAAGTTTGCCCGAGTaGGCTGAGCGTCTCCGCGGC | + |
Preference number: 5 (lower is better) Translates to: MLPALARYAQDIVGPLERQSLPE*AERLRG Trigger: GCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTG...TCTCTCTAGGGGCCCCACTATATCCTGGGCATACCTAGCTAAAGCAGGCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | GCCAGAGAAGAGCCGGGACTGCTTCAAGTGCACAAGGAGGACAACCAGGCTGTGGCCTCGAATGTCCACTaGGTGGCTCCACCAAAGATC | + |
Preference number: 5 (lower is better) Translates to: AREEPGLLQVHKEDNQAVASNVH*VAPPKI Trigger: GATCTTTGGTGGAGCCACCAAGTGGACATTCGAGGC...CACAGCCTGGTTGTCCTCCTTGTGCACTTGAAGCAGTCCCGGCTCTTCTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 90 bp | CAAGCCTCGAATGTCCACTTGGTGGCTCCACCAAAGATCTCGATCTaGGACTCAGCCCAGGCGATGACATTGCCAGAGAGAGCCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: QASNVHLVAPPKISI*DSAQAMTLPERALL Trigger: CAGCAAGGCTCTCTCTGGCAATGTCATCGCCTGGGCTGAGTCCCAGATCGAGATCTTTGGTGGAGCCACCAAGTGGACATTCGAGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | AGGGGGTACTCATGCCTACTTTCAATAAGGAAAAGCCACGGGCTCAGTGTCTCAGGCGCCGCACTGGACTaGAGCCACATGCACACGGTG | + |
Preference number: 5 (lower is better) Translates to: RGYSCLLSIRKSHGLSVSGAALD*SHMHTV Trigger: CACCGTGTGCATGTGGCTCAAGTCCAGTGCGGCGCC...TGAGACACTGAGCCCGTGGCTTTTCCTTATTGAAAGTAGGCATGAGTACCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 90 bp | TTCACCCGAGACAGCACCTGCCGCTCCAGGTCATCGATCTTGCTCTaGAGCAGATCCTTGAGGCTGTTGGTTTGGCTGGAAGAATTGAGG | + |
Preference number: 5 (lower is better) Translates to: FTRDSTCRSRSSILL*SRSLRLLVWLEELR Trigger: CCTCAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGCGGCAGGTGCTGTCTCGGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | GAAGGGAACAAACTAACTCATTCTAGAAGAAAGCCTCCCTACACACACACTCGCGGTCGGCCCGAAATCTaGGGCCCCACTGCCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: EGNKLTHSRRKPPYTHTRGRPEI*GPTAQE Trigger: CTCCTGGGCAGTGGGGCCCAAGATTTCGGGCCGACC...GCGAGTGTGTGTGTAGGGAGGCTTTCTTCTAGAATGAGTTAGTTTGTTCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | TTACACACCCTCAAGATCTGGTGGCCCCTCATCAGAGCTCACTGGAATGACTGTGCCCAGGCGATGACATaGCCAGAGAGAGCCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: LHTLKIWWPLIRAHWNDCAQAMT*PERALL Trigger: CAGCAAGGCTCTCTCTGGCAATGTCATCGCCTGGGC...ACAGTCATTCCAGTGAGCTCTGATGAGGGGCCACCAGATCTTGAGGGTGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 90 bp | AGGTCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTTGGTTTaGCTGGAAGAATTGAGGCGGCTGTACTGCTCGAGGTTCTCCAGT | + |
Preference number: 5 (lower is better) Translates to: RSSILLCSRSLRLLV*LEELRRLYCSRFSS Trigger: ACTGGAGAACCTCGAGCAGTACAGCCGCCTCAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | GGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCGTTTGGCTGGAAGAATaGAGGCGGCTGTACTGCTCG | + |
Preference number: 5 (lower is better) Translates to: GGARSGLESRFEVQVLSPVWLEE*RRLYCS Trigger: CGAGCAGTACAGCCGCCTCAATTCTTCCAGCCAAAC...GGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 90 bp | TGGCAGGCTCTTCTTCACCTTGGCATACATGTAGTTGGTCCGCAGTaGGAATGTCAGCTGAAACTTGTCTCCGGGGCGATTGTCTTTCTG | + |
Preference number: 5 (lower is better) Translates to: WQALLHLGIHVVGPQ*ECQLKLVSGAIVFL Trigger: CAGAAAGACAATCGCCCCGGAGACAAGTTTCAGCTGACATTCCCACTGCGGACCAACTACATGTATGCCAAGGTGAAGAAGAGCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 90 bp | CATACATCTCTGGCAGGCTCTTCTTCACCTTGGCATACATGTAGTTaGTCCGCAGTGGGAATGTCAGCTGAAACTTGTCTCCGGGGCGAT | + |
Preference number: 5 (lower is better) Translates to: HTSLAGSSSPWHTCS*SAVGMSAETCLRGD Trigger: ATCGCCCCGGAGACAAGTTTCAGCTGACATTCCCACTGCGGACCAACTACATGTATGCCAAGGTGAAGAAGAGCCTGCCAGAGATGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | TTTCTCAGGGCCAGCAAAGTGCCAAGTGTGAACACAGTGACGGAGAGGAGGGCTAGATCCTTGAGGCTGTaGGTTTGGCTGGAAGAATTG | + |
Preference number: 5 (lower is better) Translates to: FLRASKVPSVNTVTERRARSLRL*VWLEEL Trigger: CAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCT...AGCCCTCCTCTCCGTCACTGTGTTCACACTTGGCACTTTGCTGGCCCTGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | TGCGGCTGTCGTTACCTTTCTCAGGGCCAGCAAAGTGCCAAGTGTGAACACAGTGGCAGCTTGGCCACCTaGTCATTAATGAGTATCTCC | + |
Preference number: 5 (lower is better) Translates to: CGCRYLSQGQQSAKCEHSGSLAT*SLMSIS Trigger: GGAGATACTCATTAATGACAAGGTGGCCAAGCTGCC...ACTGTGTTCACACTTGGCACTTTGCTGGCCCTGAGAAAGGTAACGACAGCCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | AGGCTAAAAGTAAGGGTGGGGCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCGAGAGATTGCAAAGTTaGCCCGAGTTGGCTGAGCGT | + |
Preference number: 5 (lower is better) Translates to: RLKVRVGLDLVWKVDLKFERLQS*PELAER Trigger: ACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTC...GAACTTCAAATCGACTTTCCAGACCAGATCGAGCCCCACCCTTACTTTTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | ATGCTGCCTGCTTTAGCTAGGTATGCCCAGGATATAGTGGGGCCCCTAGAGAGAATTACAAACGGCAGCTaGGCCACCTTGTCATTAATG | + |
Preference number: 5 (lower is better) Translates to: MLPALARYAQDIVGPLERITNGS*ATLSLM Trigger: CATTAATGACAAGGTGGCCAAGCTGCCGTTTGTAAT...TCTCTCTAGGGGCCCCACTATATCCTGGGCATACCTAGCTAAAGCAGGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | GCTCGATCTGGTCTGGAAAGTCGATTTGAAGTTCAAGTTCTCTCTCCCAACCATTTGCGGTCCCAGATGTaGAAATGGGCTAGCTCACCC | + |
Preference number: 5 (lower is better) Translates to: ARSGLESRFEVQVLSPNHLRSQM*KWASSP Trigger: GGGTGAGCTAGCCCATTTCAACATCTGGGACCGCAA...ATGGTTGGGAGAGAGAACTTGAACTTCAAATCGACTTTCCAGACCAGATCGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | AGGGGGTACTCATGCCTACTTTCAATAAGGAAAAGCCACGGGCTCAGTGTCTCATCGGGTTTTGAGAGATaGCAAAGTTTGCCCGAGTTG | + |
Preference number: 5 (lower is better) Translates to: RGYSCLLSIRKSHGLSVSSGFER*QSLPEL Trigger: CAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGA...TGAGACACTGAGCCCGTGGCTTTTCCTTATTGAAAGTAGGCATGAGTACCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS-3UTR CAA 90 bp | GAAGGGAACAAACTAACTCATTCTAGAAGAAAGCCTCCCTACACACACACTCGCTCCAGGTCATCGATCTaGCTCTGCAGCAGATCCTTG | + |
Preference number: 5 (lower is better) Translates to: EGNKLTHSRRKPPYTHTRSRSSI*LCSRSL Trigger: CAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGA...GCGAGTGTGTGTGTAGGGAGGCTTTCTTCTAGAATGAGTTAGTTTGTTCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 72 bp | CGCGCCGCCCGCAGCCACGGACGCGGCACACATGTCTaGATCCACCGGCACCGAAGTGCAGATGAAGCGGGT | + |
Preference number: 6 (lower is better) Translates to: RAARSHGRGTHV*IHRHRSADEAG Trigger: ACCCGCTTCATCTGCACTTCGGTGCCGGTGGATGCAGACATGTGTGCCGCGTCCGTGGCTGCGGGCGGCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | GAGGTTCTCCAGTCGGGTTTTGAGAGATTGCAAAGTTTGCCCGAGTaGGCTGAGCGTCTCCGCGGCCGGCGTCCGGGACAGGTCGCCCAT | + |
Preference number: 6 (lower is better) Translates to: EVLQSGFERLQSLPE*AERLRGRRPGQVAH Trigger: ATGGGCGACCTGTCCCGGACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 72 bp | CACACATGTCTGCATCCACCGGCACCGAAGTGCAGATaGAGCGGGTCGGCCCGAAATCTTGGGCCCCACTGC | + |
Preference number: 6 (lower is better) Translates to: HTCLHPPAPKCR*SGSARNLGPHC Trigger: GCAGTGGGGCCCAAGATTTCGGGCCGACCCGCTTCATCTGCACTTCGGTGCCGGTGGATGCAGACATGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 72 bp | GATAGGGTGCCAAGTTCTCTCCATTGCCACCCTGGGTaGCATCCTGATAGGCCTCCCAGACCCCATCCCGGG | + |
Preference number: 6 (lower is better) Translates to: DRVPSSLHCHPG*HPDRPPRPHPG Trigger: CCCGGGATGGGGTCTGGGAGGCCTATCAGGATGGCACCCAGGGTGGCAATGGAGAGAACTTGGCACCCTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 72 bp | AGTCGGGTTTTGAGAGATTGCAAAGTTTGCCCGAGTTaGCTGAGCGTCTCCGCGGCCGGCGTCCGGGACAGG | + |
Preference number: 6 (lower is better) Translates to: SRVLRDCKVCPS*LSVSAAGVRDR Trigger: CCTGTCCCGGACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | CAGTCGGGTTTTGAGAGATTGCAAAGTTTGCCCGAGTaGGCTGAGCGTCTCCGCGGCCGGCGTCCGGGACAG | + |
Preference number: 6 (lower is better) Translates to: QSGFERLQSLPE*AERLRGRRPGQ Trigger: CTGTCCCGGACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | CAGGTGGCCAGGTTGTACACCTCCCCGGGGGTCAGCTaGCGGTCCCAGATGTTGAAATGGGCTAGCTCACCC | + |
Preference number: 6 (lower is better) Translates to: QVARLYTSPGVS*RSQMLKWASSP Trigger: GGGTGAGCTAGCCCATTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | GTACTGCTCGAGGTTCTCCAGTCGGGTTTTGAGAGATTGCAAAGTTaGCCCGAGTTGGCTGAGCGTCTCCGCGGCCGGCGTCCGGGACAG | + |
Preference number: 6 (lower is better) Translates to: VLLEVLQSGFERLQS*PELAERLRGRRPGQ Trigger: CTGTCCCGGACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | GAGGCGGCTGTACTGCTCGAGGTTCTCCAGTCGGGTTTTGAGAGATaGCAAAGTTTGCCCGAGTTGGCTGAGCGTCTCCGCGGCCGGCGT | + |
Preference number: 6 (lower is better) Translates to: EAAVLLEVLQSGFER*QSLPELAERLRGRR Trigger: ACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTACAGCCGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | GCGATGACATTGCCAGAGAGAGCCTTGCTGCTGCAGGTGGCCAGGTaGTACACCTCCCCGGGGGTCAGCTTGCGGTCCCAGATGTTGAAA | + |
Preference number: 6 (lower is better) Translates to: AMTLPERALLLQVAR*YTSPGVSLRSQMLK Trigger: TTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAGCAGCAAGGCTCTCTCTGGCAATGTCATCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 72 bp | ACACCTCCCCGGGGGTCAGCTTGCGGTCCCAGATGTTaGAATGGGCTAGCTCACCCACAAATGCTTGGGTGG | + |
Preference number: 6 (lower is better) Translates to: TPPRGSACGPRC*NGLAHPQMLGW Trigger: CCACCCAAGCATTTGTGGGTGAGCTAGCCCATTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 72 bp | AGGTTCTCCAGTCGGGTTTTGAGAGATTGCAAAGTTTaGCCGAGTTGGCTGAGCGTCTCCGCGGCCGGCGTC | + |
Preference number: 6 (lower is better) Translates to: RFSSRVLRDCKV*PSWLSVSAAGV Trigger: GACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 72 bp | TTCCCCTCCTCCAGAGTGTTCACCCGAGACAGCACCTaGCGCTCCAGGTCATCGATCTTGCTCTGCAGCAGA | + |
Preference number: 6 (lower is better) Translates to: FPSSRVFTRDST*RSRSSILLCSR Trigger: TCTGCTGCAGAGCAAGATCGATGACCTGGAGCGGCAGGTGCTGTCTCGGGTGAACACTCTGGAGGAGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 72 bp | TCCGTTGGTGTAGGGAGGTCAAGGCGCTCTCGATCTTaGCCCTTTCCTCTGTGTCGTTCTTGGGGCCCCCTT | + |
Preference number: 6 (lower is better) Translates to: SVGVGRSRRSRS*PFPLCRSWGPL Trigger: AAGGGGGCCCCAAGAACGACACAGAGGAAAGGGCCAAGATCGAGAGCGCCTTGACCTCCCTACACCAACGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | GAGGTTCTCCAGTCGGGTTTTGAGAGATTGCAAAGTTaGCCCGAGTTGGCTGAGCGTCTCCGCGGCCGGCGT | + |
Preference number: 6 (lower is better) Translates to: EVLQSGFERLQS*PELAERLRGRR Trigger: ACGCCGGCCGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | TTGCTGCTGCAGGTGGCCAGGTTGTACACCTCCCCGGGGGTCAGCTaGCGGTCCCAGATGTTGAAATGGGCTAGCTCACCCACAAATGCT | + |
Preference number: 6 (lower is better) Translates to: LLLQVARLYTSPGVS*RSQMLKWASSPTNA Trigger: AGCATTTGTGGGTGAGCTAGCCCATTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAGCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 72 bp | CGGGGCGATTGTCTTTCTGACCTTTCTCCAGCTCGCTaGTCCGTTGGTGTAGGGAGGTCAAGGCGCTCTCGA | + |
Preference number: 6 (lower is better) Translates to: RGDCLSDLSPAR*SVGVGRSRRSR Trigger: TCGAGAGCGCCTTGACCTCCCTACACCAACGGATCAGCGAGCTGGAGAAAGGTCAGAAAGACAATCGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 72 bp | CCTGTTCCTGACCCAGCACCAGCACGCCCTGTGGTTTaGTGGGGTGATAGGGTGCCAAGTTCTCTCCATTGC | + |
Preference number: 6 (lower is better) Translates to: PVPDPAPARPVV*WGDRVPSSLHC Trigger: GCAATGGAGAGAACTTGGCACCCTATCACCCCATCAAACCACAGGGCGTGCTGGTGCTGGGTCAGGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS TCA 72 bp | CACCAAAGATCTCGATCTGGGACTCAGCCCAGGCGATaGCATTGCCAGAGAGAGCCTTGCTGCTGCAGGTGG | + |
Preference number: 6 (lower is better) Translates to: HQRSRSGTQPRR*HCQREPCCCRW Trigger: CCACCTGCAGCAGCAAGGCTCTCTCTGGCAATGTCATCGCCTGGGCTGAGTCCCAGATCGAGATCTTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | ACCCGAGACAGCACCTGCCGCTCCAGGTCATCGATCTaGCTCTGCAGCAGATCCTTGAGGCTGTTGGTTTGG | + |
Preference number: 6 (lower is better) Translates to: TRDSTCRSRSSI*LCSRSLRLLVW Trigger: CCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGCGGCAGGTGCTGTCTCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | TACACCTCCCCGGGGGTCAGCTTGCGGTCCCAGATGTaGAAATGGGCTAGCTCACCCACAAATGCTTGGGTG | + |
Preference number: 6 (lower is better) Translates to: YTSPGVSLRSQM*KWASSPTNAWV Trigger: CACCCAAGCATTTGTGGGTGAGCTAGCCCATTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 72 bp | GACAGCACCTGCCGCTCCAGGTCATCGATCTTGCTCTaGAGCAGATCCTTGAGGCTGTTGGTTTGGCTGGAA | + |
Preference number: 6 (lower is better) Translates to: DSTCRSRSSILL*SRSLRLLVWLE Trigger: TTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGCGGCAGGTGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | GAAGAATTGAGGCGGCTGTACTGCTCGAGGTTCTCCAGTCGGGTTTaGAGAGATTGCAAAGTTTGCCCGAGTTGGCTGAGCGTCTCCGCG | + |
Preference number: 6 (lower is better) Translates to: EELRRLYCSRFSSRV*RDCKVCPSWLSVSA Trigger: CGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTACAGCCGCCTCAATTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | CGCTCCAGGTCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTaGGTTTGGCTGGAAGAATTGAGGCGGCTGTACTGCTCGAGGTTC | + |
Preference number: 6 (lower is better) Translates to: RSRSSILLCSRSLRL*VWLEELRRLYCSRF Trigger: GAACCTCGAGCAGTACAGCCGCCTCAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | AGAGTGTTCACCCGAGACAGCACCTGCCGCTCCAGGTCATCGATCTaGCTCTGCAGCAGATCCTTGAGGCTGTTGGTTTGGCTGGAAGAA | + |
Preference number: 6 (lower is better) Translates to: RVFTRDSTCRSRSSI*LCSRSLRLLVWLEE Trigger: TTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTGGAGCGGCAGGTGCTGTCTCGGGTGAACACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS GCA 72 bp | TACTGCTCGAGGTTCTCCAGTCGGGTTTTGAGAGATTaGAAAGTTTGCCCGAGTTGGCTGAGCGTCTCCGCG | + |
Preference number: 6 (lower is better) Translates to: YCSRFSSRVLRD*KVCPSWLSVSA Trigger: CGCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | GTACTGCTCGAGGTTCTCCAGTCGGGTTTTGAGAGATaGCAAAGTTTGCCCGAGTTGGCTGAGCGTCTCCGC | + |
Preference number: 6 (lower is better) Translates to: VLLEVLQSGFER*QSLPELAERLR Trigger: GCGGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | AGGCGGCTGTACTGCTCGAGGTTCTCCAGTCGGGTTTaGAGAGATTGCAAAGTTTGCCCGAGTTGGCTGAGC | + |
Preference number: 6 (lower is better) Translates to: RRLYCSRFSSRV*RDCKVCPSWLS Trigger: GCTCAGCCAACTCGGGCAAACTTTGCAATCTCTCAAAACCCGACTGGAGAACCTCGAGCAGTACAGCCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | AGCAGATCCTTGAGGCTGTTGGTTTGGCTGGAAGAATaGAGGCGGCTGTACTGCTCGAGGTTCTCCAGTCGG | + |
Preference number: 6 (lower is better) Translates to: SRSLRLLVWLEE*RRLYCSRFSSR Trigger: CCGACTGGAGAACCTCGAGCAGTACAGCCGCCTCAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 90 bp | CAGGTCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTTGGTTaGGCTGGAAGAATTGAGGCGGCTGTACTGCTCGAGGTTCTCCAG | + |
Preference number: 6 (lower is better) Translates to: QVIDLALQQILEAVG*AGRIEAAVLLEVLQ Trigger: CTGGAGAACCTCGAGCAGTACAGCCGCCTCAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGACCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 72 bp | AATGTCCACTTGGTGGCTCCACCAAAGATCTCGATCTaGGACTCAGCCCAGGCGATGACATTGCCAGAGAGA | + |
Preference number: 6 (lower is better) Translates to: NVHLVAPPKISI*DSAQAMTLPER Trigger: TCTCTCTGGCAATGTCATCGCCTGGGCTGAGTCCCAGATCGAGATCTTTGGTGGAGCCACCAAGTGGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CAA 72 bp | TCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTaGGTTTGGCTGGAAGAATTGAGGCGGCTGTACTGC | + |
Preference number: 6 (lower is better) Translates to: SSILLCSRSLRL*VWLEELRRLYC Trigger: GCAGTACAGCCGCCTCAATTCTTCCAGCCAAACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 72 bp | CTTCTTCACCTTGGCATACATGTAGTTGGTCCGCAGTaGGAATGTCAGCTGAAACTTGTCTCCGGGGCGATT | + |
Preference number: 6 (lower is better) Translates to: LLHLGIHVVGPQ*ECQLKLVSGAI Trigger: AATCGCCCCGGAGACAAGTTTCAGCTGACATTCCCACTGCGGACCAACTACATGTATGCCAAGGTGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |
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CDS CCA 72 bp | CTGGCAGGCTCTTCTTCACCTTGGCATACATGTAGTTaGTCCGCAGTGGGAATGTCAGCTGAAACTTGTCTC | + |
Preference number: 6 (lower is better) Translates to: LAGSSSPWHTCS*SAVGMSAETCL Trigger: GAGACAAGTTTCAGCTGACATTCCCACTGCGGACCAACTACATGTATGCCAAGGTGAAGAAGAGCCTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026670.5 |