Pregenerated sensors for NPTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032336Ensembl transcript IDs: ENSMUST00000085651.12, ENSMUST00000114121.11, ENSMUST00000175945.7, ENSMUST00000176250.2, ENSMUST00000176557.8, ENSMUST00000176896.8, ENSMUST00000176916.8, ENSMUST00000177064.8, ENSMUST00000177292.8, ENSMUST00000177380.8
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATTCCCAAGAAAGGCCAAAGTGGGGCAAGGTGGCTCCGTACCCTaGGGACGGTGGAAACGGAGGCAGAGCCAATGGAGTTGGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: EFPRKAKVGQGGSVP*GRWKRRQSQWSWWH Trigger: ATGCCACCAACTCCATTGGCTCTGCCTCCGTTTCCACCGTCCTCAGGGTACGGAGCCACCTTGCCCCACTTTGGCCTTTCTTGGGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR CCA 90 bp | CACAAGGATGATGATTTCAGCCAGAATTCCCAAGAAAGGCCAAAGTaGGGCAAGGTGGCTCCGTACCCTGAGGACGGTGGAAACGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: HKDDDFSQNSQERPK*GKVAPYPEDGGNGG Trigger: GCCTCCGTTTCCACCGTCCTCAGGGTACGGAGCCACCTTGCCCCACTTTGGCCTTTCTTGGGAATTCTGGCTGAAATCATCATCCTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR TCA 90 bp | TGTGTATGGCAGCTGGGGCAGGTGTTCTACAGGAAAGGACCTCAGTaGCACATCGAGCTCAGGTATTTCTGTGCTGGATTTTGTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: CVWQLGQVFYRKGPQ*HIELRYFCAGFCSS Trigger: AGAGGAACAAAATCCAGCACAGAAATACCTGAGCTCGATGTGTCACTGAGGTCCTTTCCTGTAGAACACCTGCCCCAGCTGCCATACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR GCA 90 bp | ATTGCGGTTTGTGTGCTCCTGCATTTCCACAATAAGAAGAGAAGCTaGACTGGCAAGTGCTGCACCTGTGAGTACAAATGGCATGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: IAVCVLLHFHNKKRS*TGKCCTCEYKWHGP Trigger: AGGACCATGCCATTTGTACTCACAGGTGCAGCACTTGCCAGTGCAGCTTCTCTTCTTATTGTGGAAATGCAGGAGCACACAAACCGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CCA 90 bp | AAGAAGAGAAGCTGCACTGGCAAGTGCTGCACCTGTGAGTACAAATaGCATGGTCCTAGCAGGTGGTTACACATTAGATATACTTACTGT | + |
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Preference number: 1 (lower is better) Translates to: KKRSCTGKCCTCEYK*HGPSRWLHIRYTYC Trigger: ACAGTAAGTATATCTAATGTGTAACCACCTGCTAGGACCATGCCATTTGTACTCACAGGTGCAGCACTTGCCAGTGCAGCTTCTCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR GCA 90 bp | TCCCAGCACTCCTATGGCAAGATGGGAAGCAGAGATAAAGAACGTTaGTTGATTCAATGGCCAAAAACAATGAGATTCTGTCTCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: SQHSYGKMGSRDKER*LIQWPKTMRFCLTR Trigger: TCTGGTGAGACAGAATCTCATTGTTTTTGGCCATTGAATCAAGCAACGTTCTTTATCTCTGCTTCCCATCTTGCCATAGGAGTGCTGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CCA 90 bp | GGCAAGTGCTGCACCTGTGAGTACAAATGGCATGGTCCTAGCAGGTaGTTACACATTAGATATACTTACTGTGTAATATTAACCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: GKCCTCEYKWHGPSR*LHIRYTYCVILTQP Trigger: TGGCTGGGTTAATATTACACAGTAAGTATATCTAATGTGTAACCACCTGCTAGGACCATGCCATTTGTACTCACAGGTGCAGCACTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR TCA 90 bp | CTGATTACAAGCATCCATAAGAACAGAAACAGCCCAGGTTTGCTCTaGCCTTTTTGGGCAGATGATCCTCTGGAACATTATAGCTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: LITSIHKNRNSPGLL*PFWADDPLEHYSLA Trigger: TGCTAAGCTATAATGTTCCAGAGGATCATCTGCCCAAAAAGGTCAGAGCAAACCTGGGCTGTTTCTGTTCTTATGGATGCTTGTAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR CCA 90 bp | TATGGCAAGATGGGAAGCAGAGATAAAGAACGTTGCTTGATTCAATaGCCAAAAACAATGAGATTCTGTCTCACCAGAGTGGCAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: YGKMGSRDKERCLIQ*PKTMRFCLTRVAGK Trigger: CTTTCCTGCCACTCTGGTGAGACAGAATCTCATTGTTTTTGGCCATTGAATCAAGCAACGTTCTTTATCTCTGCTTCCCATCTTGCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR TCA 90 bp | TGTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAACAAATaGCTTTTGTCCTTCAGATGGCCAATTACAAAGACCAGCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CLCQITQITTIKQNK*LLSFRWPITKTSSC Trigger: GCAGGAGCTGGTCTTTGTAATTGGCCATCTGAAGGACAAAAGTCATTTGTTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR GCA 90 bp | AGAGGTTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTaGTCTCCAAGGAAAAGCCAATTTCTACTAATACATAATACTTTT | + |
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Preference number: 1 (lower is better) Translates to: RGYHAASITRVELSC*SPRKSQFLLIHNTF Trigger: AAAAGTATTATGTATTAGTAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAACCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
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| 3UTR GCA 90 bp | CATGAGAGTTTTAGGACATCCTATATTCTTGACTATGGAAAAGTTTaGATGTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: HESFRTSYILDYGKV*MSLSNYSDHHHQTK Trigger: TTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGACATGCAAACTTTTCCATAGTCAAGAATATAGGATGTCCTAAAACTCTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CAA 90 bp | CTCCGTACCCTGAGGACGGTGGAAACGGAGGCAGAGCCAATGGAGTaGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRTLRTVETEAEPME*VALHSYSPGSSVIW Trigger: CCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTCCATTGGCTCTGCCTCCGTTTCCACCGTCCTCAGGGTACGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCCAGCAACTGTGAAAAGGAAAACCCTTGTCCAGCAGGAGGCAGACTTCCCCAGGCTAAATAAGGCATaGTTTAGACGGTCATTGTGG | + |
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Preference number: 2 (lower is better) Translates to: APATVKRKTLVQQEADFPRLNKA*FRRSLW Trigger: CCACAATGACCGTCTAAAGCATGCCTTATTTAGCCT...GGGGAAGTCTGCCTCCTGCTGGACAAGGGTTTTCCTTTTCACAGTTGCTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAAGTGGTGTTGCTCACTTaGAAGGGAGAGAGACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LWCCSLERERDQRGPSRKVVLLT*KGERPK Trigger: CTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCAC...TTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| 3UTR-3UTR TCA 90 bp | AACCTCATCTGGCCTCTTCCTCTTCTCATACACAACAATGATCACCACAAGGATGTGGGGGTAGCCAACTaGCTTGCAGTACATCATAGC | + |
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Preference number: 2 (lower is better) Translates to: NLIWPLPLLIHNNDHHKDVGVAN*LAVHHS Trigger: GCTATGATGTACTGCAAGTCAGTTGGCTACCCCCAC...ATCCTTGTGGTGATCATTGTTGTGTATGAGAAGAGGAAGAGGCCAGATGAGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR CAA 90 bp | CTGTCACTCCATCACAACTATGTCAGTGCCACATCAGACACAGCTTaGGTTCAAACAGCATGCTCAGGGATGTGGTATGAAACTCTGATC | + |
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Preference number: 2 (lower is better) Translates to: LSLHHNYVSATSDTA*VQTACSGMWYETLI Trigger: GATCAGAGTTTCATACCACATCCCTGAGCATGCTGTTTGAACCAAAGCTGTGTCTGATGTGGCACTGACATAGTTGTGATGGAGTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR TCA 90 bp | CATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTACTGTGGTGTTGCTCACTTaGAAGGGAGAGAGACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: HHQSRALMLLSKEKPISTVVLLT*KGERPK Trigger: CTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCAC...AGTAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTAGAAACAGCCCAGGTTTaGTCTGACCTTTTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SITRVELSCCSPRKSQFLETAQV*SDLFGQ Trigger: CTGCCCAAAAAGGTCAGAGCAAACCTGGGCTGTTTC...TAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR-3UTR CCA 90 bp | TTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAATTTAGACGGTCATTGTaGTGTTGCTCACTTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LPCSQHHQSRALMLLSKEFRRSL*CCSLER Trigger: CCTTTCAAGTGAGCAACACCACAATGACCGTCTAAA...TTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTGAATTTGTAGCAAGGTaGGCAGAAGCACAGTTCATT | + |
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Preference number: 2 (lower is better) Translates to: ERDQRGPSRKLSRSCCHREFVAR*AEAQFI Trigger: AATGAACTGTGCTTCTGCTCACCTTGCTACAAATTC...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCCCTTATGGCCACATTTCTATCTTGCCTTCAGCAGAGATCACACAAAGTCGGTCATTGTGGTGTTaGTCACTTGAAAGGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LFPYGHISILPSAEITQSRSLWC*SLERER Trigger: TCTCTCCCTTTCAAGTGAGCAACACCACAATGACCG...ACTTTGTGTGATCTCTGCTGAAGGCAAGATAGAAATGTGGCCATAAGGGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCTTGTTGGTGATGAAGAAGCGACCAGAGCTATTAGAAATCTCCTCAAACCACCATTCTCCTTCTTaGGCCATATCCACTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: FSLLVMKKRPELLEISSNHHSPS*AISTLG Trigger: ACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTG...GTTTGAGGAGATTTCTAATAGCTCTGGTCGCTTCTTCATCACCAACAAGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR CAA 90 bp | CAGCACTCCTATGGCAAGATGGGAAGCAGAGATAAAGAACGTTGCTaGATTCAATGGCCAAAAACAATGAGATTCTGTCTCACCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: QHSYGKMGSRDKERC*IQWPKTMRFCLTRV Trigger: CACTCTGGTGAGACAGAATCTCATTGTTTTTGGCCATTGAATCAAGCAACGTTCTTTATCTCTGCTTCCCATCTTGCCATAGGAGTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCAAAAACAATGAGATTCTGTCTCACCAGAGTGGCAGGAAAGACCTGACTAAAAGATTACAGGGTTaGGAAACTAAAGCCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: MAKNNEILSHQSGRKDLTKRLQG*ETKALH Trigger: GTGCAGGGCTTTAGTTTCTCAACCCTGTAATCTTTT...AGTCAGGTCTTTCCTGCCACTCTGGTGAGACAGAATCTCATTGTTTTTGGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATGTGCGTTTAGAGCTTTaGCAATTTAACAGCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: RERDQRGPSRKLSRSCCHVRLEL*QFNSCI Trigger: TATGCAGCTGTTAAATTGGCAAAGCTCTAAACGCAC...ATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAATTTAGACGGTCATTGTaGTGTTGCTCACTTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HALDGHCGVAHLKGRETKFRRSL*CCSLER Trigger: CCTTTCAAGTGAGCAACACCACAATGACCGTCTAAA...TTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAATGGAGTTGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGTTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ANGVGGITFILSRIFCDLFSLRL*PVMSGA Trigger: TGCTCCTGACATCACTGGCCATAAACGAAGTGAAAA...CAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTCCATTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR-3UTR CCA 90 bp | TACATATATACTGCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTACATCAGACACAGCTTTaGTTCAAACAGCATGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: YIYTAIHSSRSVDCSRFLHQTQL*FKQHAQ Trigger: CTGAGCATGCTGTTTGAACCAAAGCTGTGTCTGATG...TAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGCAGTATATATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAAAGTTTGCATGTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAATCCAGACATTTGGGATaGAGAAACAGGACCGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GKVCMSLSNYSDHHHQTKSRHLG*RNRTVD Trigger: ATCCACGGTCCTGTTTCTGCATCCCAAATGTCTGGA...TTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGACATGCAAACTTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CAA 90 bp | GGAGTTGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTaGGAGATTCACAATACTCAATTCAGTGTAATTCTCCTTGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GVGGITFILSRIFCD*EIHNTQFSVILLVG Trigger: ACCAACAAGGAGAATTACACTGAATTGAGTATTGTGAATCTCCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTCC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR-3UTR GCA 90 bp | GGAAAAGTTTGCATGTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAAGTGCGTTTAGAGCTTTaGCAATTTAACAGCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: GKVCMSLSNYSDHHHQTKVRLEL*QFNSCI Trigger: TATGCAGCTGTTAAATTGGCAAAGCTCTAAACGCAC...TTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGACATGCAAACTTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR TCA 72 bp | AGAAAGGCCAAAGTGGGGCAAGGTGGCTCCGTACCCTaGGGACGGTGGAAACGGAGGCAGAGCCAATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: RKAKVGQGGSVP*GRWKRRQSQWS Trigger: ACTCCATTGGCTCTGCCTCCGTTTCCACCGTCCTCAGGGTACGGAGCCACCTTGCCCCACTTTGGCCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR CCA 72 bp | CTCCCTGACCCTGGAGCAGCACGTGTGTATGGCAGCTaGGGCAGGTGTTCTACAGGAAAGGACCTCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LPDPGAARVYGS*GRCSTGKDLSD Trigger: GTCACTGAGGTCCTTTCCTGTAGAACACCTGCCCCAGCTGCCATACACACGTGCTGCTCCAGGGTCAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR TCA 72 bp | GTCTATCCTGGCGCCAGAGAAGCTGACCCTCGCCTATaGAGGCTCTTCATGGGGAACAGAAGAATTGGGACC | + |
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Preference number: 3 (lower is better) Translates to: VYPGAREADPRL*RLFMGNRRIGT Trigger: GGTCCCAATTCTTCTGTTCCCCATGAAGAGCCTTCATAGGCGAGGGTCAGCTTCTCTGGCGCCAGGATAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR TCA 72 bp | CAGCTGGGGCAGGTGTTCTACAGGAAAGGACCTCAGTaGCACATCGAGCTCAGGTATTTCTGTGCTGGATTT | + |
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Preference number: 3 (lower is better) Translates to: QLGQVFYRKGPQ*HIELRYFCAGF Trigger: AAATCCAGCACAGAAATACCTGAGCTCGATGTGTCACTGAGGTCCTTTCCTGTAGAACACCTGCCCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR CCA 72 bp | CCATGTGCCTCTAAGCATTCTGGCCCTGTTCCCTTATaGCCACATTTCTATCTTGCCTTCAGCAGAGATCAC | + |
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Preference number: 3 (lower is better) Translates to: PCASKHSGPVPL*PHFYLAFSRDH Trigger: GTGATCTCTGCTGAAGGCAAGATAGAAATGTGGCCATAAGGGAACAGGGCCAGAATGCTTAGAGGCACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR CAA 90 bp | TGTATGGCAGCTGGGGCAGGTGTTCTACAGGAAAGGACCTCAGTGACACATCGATTTCTGTGCTGGATTTaGTTCCTCTTAATGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CMAAGAGVLQERTSVTHRFLCWI*FLLMLQ Trigger: CTGGAGCATTAAGAGGAACAAAATCCAGCACAGAAA...TCGATGTGTCACTGAGGTCCTTTCCTGTAGAACACCTGCCCCAGCTGCCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR GCA 72 bp | CATTTCCACAATAAGAAGAGAAGCTGCACTGGCAAGTaGTGCACCTGTGAGTACAAATGGCATGGTCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: HFHNKKRSCTGK*CTCEYKWHGPS Trigger: GCTAGGACCATGCCATTTGTACTCACAGGTGCAGCACTTGCCAGTGCAGCTTCTCTTCTTATTGTGGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR GCA 72 bp | TGTGTGCTCCTGCATTTCCACAATAAGAAGAGAAGCTaGACTGGCAAGTGCTGCACCTGTGAGTACAAATGG | + |
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Preference number: 3 (lower is better) Translates to: CVLLHFHNKKRS*TGKCCTCEYKW Trigger: CCATTTGTACTCACAGGTGCAGCACTTGCCAGTGCAGCTTCTCTTCTTATTGTGGAAATGCAGGAGCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CCA 72 bp | AGCTGCACTGGCAAGTGCTGCACCTGTGAGTACAAATaGCATGGTCCTAGCAGGTGGTTACACATTAGATAT | + |
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Preference number: 3 (lower is better) Translates to: SCTGKCCTCEYK*HGPSRWLHIRY Trigger: ATATCTAATGTGTAACCACCTGCTAGGACCATGCCATTTGTACTCACAGGTGCAGCACTTGCCAGTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTGACACAGAGAACACTGTCAGCAGTGTCCCAGCACCTGATTACAAGCATTGTGGTGTTGCTCACTaGAAAGGGAGAGAGACCAAA | + |
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Preference number: 3 (lower is better) Translates to: CSDTENTVSSVPAPDYKHCGVAH*KGRETK Trigger: TTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACA...ATGCTTGTAATCAGGTGCTGGGACACTGCTGACAGTGTTCTCTGTGTCAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATTGCTTTAGACGGTCATaGTGGTGTTGCTCACTTGAA | + |
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Preference number: 3 (lower is better) Translates to: RERDQRGPSRKLSRSCCHCFRRS*WCCSLE Trigger: TTCAAGTGAGCAACACCACAATGACCGTCTAAAGCA...ATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGGAGATTCACACCATTCTCCTTCTaGCGCCATATCCACTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ELVALHSYSPGSSVIWRFTPFSF*RHIHSG Trigger: CCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTGT...GAATCTCCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| 3UTR TCA 72 bp | TGCTGGATTTTGTTCCTCTTAATGCTCCAGCAACTGTaGAAAGGAAAACCCTTGTCCAGCAGGAGGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: CWILFLLMLQQL*KGKPLSSRRQT Trigger: AGTCTGCCTCCTGCTGGACAAGGGTTTTCCTTTTCACAGTTGCTGGAGCATTAAGAGGAACAAAATCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
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| 3UTR GCA 72 bp | TTCTGGCCCTGTTCCCTTATGGCCACATTTCTATCTTaGCTTCAGCAGAGATCACACAAAGTACTAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FWPCSLMATFLS*LQQRSHKVLTG Trigger: GCCTGTTAGTACTTTGTGTGATCTCTGCTGAAGGCAAGATAGAAATGTGGCCATAAGGGAACAGGGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAAGTTATACGGTTGTGGTGTTGCTCACTaGAAAGGGAGAGAGACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AIHSSRSVDCSRFLKLYGCGVAH*KGRETK Trigger: TTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACA...ACCGTATAACTTTAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAATGCTTTAGACGGTCATaGTGGTGTTGCTCACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HALDGHCGVAHLKGRETKCFRRS*WCCSLE Trigger: TTCAAGTGAGCAACACCACAATGACCGTCTAAAGCA...TTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAAGCGTTGACTTTATTTaGGATTTCTCCCACCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HALDGHCGVAHLKGRETKSVDFI*DFSHPQ Trigger: TTGGGGGTGGGAGAAATCCAAAATAAAGTCAACGCT...TTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
||
| 3UTR TCA 72 bp | AGCTTTGGTTCAAACAGCATGCTCAGGGATGTGGTATaGAACTCTGATCTCCATGTGCCTCTAAGCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFGSNSMLRDVV*NSDLHVPLSIL Trigger: CAGAATGCTTAGAGGCACATGGAGATCAGAGTTTCATACCACATCCCTGAGCATGCTGTTTGAACCAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR GCA 72 bp | CTAAATAAGGCATGCTTTAGACGGTCATTGTGGTGTTaGTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LNKACFRRSLWC*SLERERDQRGP Trigger: TGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATGCCTTATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| 3UTR GCA 72 bp | TTGACCTCTGTATGTACATTGCGGTTTGTGTGCTCCTaGATTTCCACAATAAGAAGAGAAGCTGCACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTSVCTLRFVCS*ISTIRREAALA Trigger: TGCCAGTGCAGCTTCTCTTCTTATTGTGGAAATGCAGGAGCACACAAACCGCAATGTACATACAGAGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR CCA 72 bp | GAGAGGCTAAATAAGGCATGCTTTAGACGGTCATTGTaGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERLNKACFRRSL*CCSLERERDQR Trigger: TCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATGCCTTATTTAGCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| 3UTR TCA 72 bp | AGCATCCATAAGAACAGAAACAGCCCAGGTTTGCTCTaGCCTTTTTGGGCAGATGATCCTCTGGAACATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SIHKNRNSPGLL*PFWADDPLEHY Trigger: ATAATGTTCCAGAGGATCATCTGCCCAAAAAGGTCAGAGCAAACCTGGGCTGTTTCTGTTCTTATGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
||
| 3UTR CCA 72 bp | CAGAAGAATTGGGACCTTTTCTACGCTTATGTCTCATaGATCAAAACTTCCCAGCATTTGTGGAAGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QKNWDLFYAYVS*IKTSQHLWKRW Trigger: CCACCTCTTCCACAAATGCTGGGAAGTTTTGATCCATGAGACATAAGCGTAGAAAAGGTCCCAATTCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR CCA 72 bp | TCGCCTATGAAGGCTCTTCATGGGGAACAGAAGAATTaGGACCTTTTCTACGCTTATGTCTCATGGATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPMKALHGEQKN*DLFYAYVSWIK Trigger: TTTGATCCATGAGACATAAGCGTAGAAAAGGTCCCAATTCTTCTGTTCCCCATGAAGAGCCTTCATAGGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR GCA 72 bp | AGAATATACACTGTCACTCCATCACAACTATGTCAGTaGCACATCAGACACAGCTTTGGTTCAAACAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RIYTVTPSQLCQ*HIRHSFGSNSM Trigger: CATGCTGTTTGAACCAAAGCTGTGTCTGATGTGGCACTGACATAGTTGTGATGGAGTGACAGTGTATATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR CCA 72 bp | ATGGGAAGCAGAGATAAAGAACGTTGCTTGATTCAATaGCCAAAAACAATGAGATTCTGTCTCACCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: MGSRDKERCLIQ*PKTMRFCLTRV Trigger: CACTCTGGTGAGACAGAATCTCATTGTTTTTGGCCATTGAATCAAGCAACGTTCTTTATCTCTGCTTCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAAGTTATACGGTTTCTACACTGAAGCATaGTTTAAAATGTACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AIHSSRSVDCSRFLKLYGFYTEA*FKMYLA Trigger: AGCCAGGTACATTTTAAACAATGCTTCAGTGTAGAA...ACCGTATAACTTTAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGGAGATTCTCCTGCCCTTCATTTTaGTTTTCACTTCGTTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: ELVALHSYSPGSSVIWRFSCPSF*FSLRLW Trigger: CCATAAACGAAGTGAAAACAAAAATGAAGGGCAGGA...GAATCTCCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAAGTTTGCATGTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAATGCTTTAGACGGTCATaGTGGTGTTGCTCACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GKVCMSLSNYSDHHHQTKCFRRS*WCCSLE Trigger: TTCAAGTGAGCAACACCACAATGACCGTCTAAAGCA...TTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGACATGCAAACTTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGATTAAAGCAGTACTTAATTaGTGTTTCTCTGGCGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AENLAGHVAIVFQEPKEIKAVLN*CFSGAS Trigger: ACTTGCGCCAGAGAAACACAAATTAAGTACTGCTTT...AATCTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176896.8 |
||
| 3UTR GCA 72 bp | TCCTATGGCAAGATGGGAAGCAGAGATAAAGAACGTTaGTTGATTCAATGGCCAAAAACAATGAGATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYGKMGSRDKER*LIQWPKTMRFC Trigger: ACAGAATCTCATTGTTTTTGGCCATTGAATCAAGCAACGTTCTTTATCTCTGCTTCCCATCTTGCCATAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAACAAATGACTTTTGTAAAACTTCCCAGCATTaGTGGAAGAGGTGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSVKLLRSPPSNKTNDFCKTSQH*WKRWKR Trigger: CCTTTTCCACCTCTTCCACAAATGCTGGGAAGTTTT...ACAAAAGTCATTTGTTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR TCA 72 bp | AGAACACAAGTACATGCATCTACAGTTAGTACCGCATaGGAACCCAGTCAGGTTATAAAATCTATCATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RTQVHASTVSTA*EPSQVIKSIIS Trigger: ACTGATGATAGATTTTATAACCTGACTGGGTTCTCATGCGGTACTAACTGTAGATGCATGTACTTGTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
||
| 3UTR CCA 72 bp | TGCACCTGTGAGTACAAATGGCATGGTCCTAGCAGGTaGTTACACATTAGATATACTTACTGTGTAATATTA | + |
|
Preference number: 3 (lower is better) Translates to: CTCEYKWHGPSR*LHIRYTYCVIL Trigger: TAATATTACACAGTAAGTATATCTAATGTGTAACCACCTGCTAGGACCATGCCATTTGTACTCACAGGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR TCA 72 bp | CAAATTACTCAGATCACCACCATCAAACAAAACAAATaGCTTTTGTCCTTCAGATGGCCAATTACAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QITQITTIKQNK*LLSFRWPITKT Trigger: GGTCTTTGTAATTGGCCATCTGAAGGACAAAAGTCATTTGTTTTGTTTGATGGTGGTGATCTGAGTAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAACAAATGACTTTTGTAACAGGACCGTGGATTaGAGATTAACCTGTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSVKLLRSPPSNKTNDFCNRTVD*RLTCVF Trigger: AAAAACACAGGTTAATCTCAAATCCACGGTCCTGTT...ACAAAAGTCATTTGTTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR TCA 72 bp | TCTGAAATTATAAAGTCTTCATGTAACACCAACTACTaGAGAATTTGTAGCAAGGTGAGCAGAAGCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SEIIKSSCNTNY*RICSKVSRSTV Trigger: AACTGTGCTTCTGCTCACCTTGCTACAAATTCTTCAGTAGTTGGTGTTACATGAAGACTTTATAATTTCAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCAAGGTGGCTCCGTACCCTGAGGACGGTGGAAACGGAGGCAGAGCCAATGACAGTGGTATTCGCCTaGATCCTCAGCTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GARWLRTLRTVETEAEPMTVVFA*ILSSWL Trigger: AAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGT...CATTGGCTCTGCCTCCGTTTCCACCGTCCTCAGGGTACGGAGCCACCTTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR CCA 90 bp | GAAATCTCCTCAAACACACCATTCTCCTTCTTGCGCCATATCCACTCTGGGTGGAGCAGCGCCTGGCCCTaGAAGGAGCGAGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EISSNTPFSFLRHIHSGWSSAWP*KERARD Trigger: GTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCT...CCACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTGTGTTTGAGGAGATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGTGGCTCCGTACCCTGAGGACGGTGGAAACGGAGGCAGAGCCAATGGAGGAGCGCTGACAAAATaGTATACACAGTGGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKVAPYPEDGGNGGRANGGALTK*YTQWYS Trigger: CGAATACCACTGTGTATATCATTTTGTCAGCGCTCC...TCCATTGGCTCTGCCTCCGTTTCCACCGTCCTCAGGGTACGGAGCCACCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTAGCAGCGCCTGGCCCTaGAAGGAGCGAGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRSSAWP*KERARD Trigger: GTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCT...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATGTTCTGAGCAGCGCCTaGCCCTGGAAGGAGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RERDQRGPSRKLSRSCCHVLSSA*PWKERA Trigger: GGCTCGCTCCTTCCAGGGCCAGGCGCTGCTCAGAAC...ATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGCAAAGTGGGGCAAGGTaGCTCCGTACCCTGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RLPCSQHHQSRALMLLSKQSGAR*LRTLRT Trigger: CGTCCTCAGGGTACGGAGCCACCTTGCCCCACTTTG...CTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACCCTTGTCCAGCAGGAGGCAGACTTCCCCAGTTCGGGAGTGTCTTACTTGTCAGGAGCAGAGTTaGGAAGGTCCACTACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GKPLSSRRQTSPVRECLTCQEQS*EGPLLT Trigger: TGTCAGTAGTGGACCTTCCCAACTCTGCTCCTGACA...AGTAAGACACTCCCGAACTGGGGAAGTCTGCCTCCTGCTGGACAAGGGTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGATTCTTGGTTCGTTCTaGGCAGCGCCTGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSLERERDQRGPSRKLSRILGSF*AAPGPG Trigger: TCCAGGGCCAGGCGCTGCTCAGAACGAACCAAGAAT...CCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGTGGGGGTAGCCAACTaGCTTGCAGTACATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPCSQHHQSRALMLLSKVGVAN*LAVHHS Trigger: GCTATGATGTACTGCAAGTCAGTTGGCTACCCCCAC...CTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGAGCAGCGCCTGGCCCTaGAAGGAGCGAGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAENLAGHVAIVFQEPKESSAWP*KERARD Trigger: GTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCT...CTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGGAGATTCGTTCTGAGCAGCGCCTaGCCCTGGAAGGAGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELVALHSYSPGSSVIWRFVLSSA*PWKERA Trigger: GGCTCGCTCCTTCCAGGGCCAGGCGCTGCTCAGAAC...GAATCTCCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTCAAAGTGGGGCAAGGTaGCTCCGTACCCTGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVQSGAR*LRTLRT Trigger: CGTCCTCAGGGTACGGAGCCACCTTGCCCCACTTTG...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCATTCTTGGTTCGTTCTaGGCAGCGCCTGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPSRKLSRSCCHRFSGTILGSF*AAPGPG Trigger: TCCAGGGCCAGGCGCTGCTCAGAACGAACCAAGAAT...GGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGGGTTACACTGCAGGGTaGCAGGAAGGAGGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLERERDQRGPSRKLSRGYTAG*QEGGFL Trigger: GAGAAAGCCTCCTTCCTGTCACCCTGCAGTGTAACC...CCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTGGGGGTAGCCAACTaGCTTGCAGTACATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRETKEVQAENLAGHVAIVGVAN*LAVHHS Trigger: GCTATGATGTACTGCAAGTCAGTTGGCTACCCCCAC...GATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGGTGTTCTACAGGAAAGGACCTCAGTGACACATCGAGCTCAGGTATTCGGAGGCAGAGCCAATaGAGTTGGTGGCATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: WGRCSTGKDLSDTSSSGIRRQSQ*SWWHYI Trigger: AATGTAATGCCACCAACTCCATTGGCTCTGCCTCCG...AATACCTGAGCTCGATGTGTCACTGAGGTCCTTTCCTGTAGAACACCTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAAGTTATACGGTCAAAGTGGGGCAAGGTaGCTCCGTACCCTGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: AIHSSRSVDCSRFLKLYGQSGAR*LRTLRT Trigger: CGTCCTCAGGGTACGGAGCCACCTTGCCCCACTTTG...ACCGTATAACTTTAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGCAAGAAAGGCCAAAGTaGGGCAAGGTGGCTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLERERDQRGPSRKLSRQERPK*GKVAPY Trigger: GTACGGAGCCACCTTGCCCCACTTTGGCCTTTCTTG...CCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTCAAGAAAGGCCAAAGTaGGGCAAGGTGGCTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRQERPK*GKVAPY Trigger: GTACGGAGCCACCTTGCCCCACTTTGGCCTTTCTTG...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCAGAGGTTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGTTTCATTGGCCCAGCTaGTTCATCATCATCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGQRLPCSQHHQSRALMLFHWPS*FIIIRN Trigger: GTTCCTGATGATGATGAACCAGCTGGGCCAATGAAA...CAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAACCTCTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| 3UTR CAA 72 bp | CTGAGGACGGTGGAAACGGAGGCAGAGCCAATGGAGTaGGTGGCATTACATTCATACTCTCCAGGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTVETEAEPME*VALHSYSPGSS Trigger: AGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTCCATTGGCTCTGCCTCCGTTTCCACCGTCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR TCA 90 bp | GCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAAGTTATACGGTATTCTTGGTTCGTTCTaGGCAGCGCCTGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AIHSSRSVDCSRFLKLYGILGSF*AAPGPG Trigger: TCCAGGGCCAGGCGCTGCTCAGAACGAACCAAGAAT...ACCGTATAACTTTAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTGTGGGGGTAGCCAACTaGCTTGCAGTACATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRVGVAN*LAVHHS Trigger: GCTATGATGTACTGCAAGTCAGTTGGCTACCCCCAC...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCTCCTGTACTCCATGTTaGTGGCATTCTTACGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRETKEVQAENLAGHVAISCTPC*WHSYGW Trigger: CCACCCGTAAGAATGCCAGCAACATGGAGTACAGGA...GATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR GCA 90 bp | TACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAACACCATTCTCCTTCTTaGGCCATATCCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YHAASITRVELSCCSPRKHHSPS*AISTLG Trigger: ACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTG...TTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTCAAGAAAGGCCAAAGTaGGGCAAGGTGGCTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVQERPK*GKVAPY Trigger: GTACGGAGCCACCTTGCCCCACTTTGGCCTTTCTTG...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAATCTTACGGGTGGCAGTaGGTTCTACCCCATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWCCSLERERDQRGPSRKSYGWQ*VLPHSL Trigger: CAAGGAATGGGGTAGAACTCACTGCCACCCGTAAGA...TTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATTCTTACGGGTGGCAGTaGGTTCTACCCCATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLKGRETKEVQAENLAGHSYGWQ*VLPHSL Trigger: CAAGGAATGGGGTAGAACTCACTGCCACCCGTAAGA...ATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCTCTTACGGGTGGCAGTaGGTTCTACCCCATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCSLERERDQRGPSRKLSSYGWQ*VLPHSL Trigger: CAAGGAATGGGGTAGAACTCACTGCCACCCGTAAGA...GCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTCATTTTTGTTTTCACTTCGTTTATGGCCAGTGATGTCAGGAGCAGCTCAGCTCTTGGCTTATTaGTCCGTTCTGAGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPSFLFSLRLWPVMSGAAQLLAY*SVLSSA Trigger: GGCGCTGCTCAGAACGGATCAATAAGCCAAGAGCTG...AGCTGCTCCTGACATCACTGGCCATAAACGAAGTGAAAACAAAAATGAAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR GCA 90 bp | GCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGTCCTGTACTCCATGTTaGTGGCATTCTTACGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGHCGVAHLKGRETKESCTPC*WHSYGW Trigger: CCACCCGTAAGAATGCCAGCAACATGGAGTACAGGA...CTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 |
||
| CDS-3UTR CCA 90 bp | CATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTACTCAAGAAAGGCCAAAGTaGGGCAAGGTGGCTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HHQSRALMLLSKEKPISTQERPK*GKVAPY Trigger: GTACGGAGCCACCTTGCCCCACTTTGGCCTTTCTTG...AGTAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTGTCAGGAGCAGAGTTaGGAAGGTCCACTACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLERERDQRGPSRKLSRCQEQS*EGPLLT Trigger: TGTCAGTAGTGGACCTTCCCAACTCTGCTCCTGACA...CCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | GCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCAGCTCTTGGCTTATTaGTCCTGTACTCCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHLKGRETKEVQAENLAGQLLAY*SCTPCC Trigger: GCAACATGGAGTACAGGATCAATAAGCCAAGAGCTG...ACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAAACAGTGGTATTCGCCTaGATCCTCAGCTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWCCSLERERDQRGPSRKTVVFA*ILSSWL Trigger: AAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGT...TTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTAGTGGGGGTAGCCAACTaGCTTGCAGTACATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SITRVELSCCSPRKSQFLVGVAN*LAVHHS Trigger: GCTATGATGTACTGCAAGTCAGTTGGCTACCCCCAC...TAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAGTGGGGGTAGCCAACTaGCTTGCAGTACATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRGPSRKLSRSCCHRFSGVGVAN*LAVHHS Trigger: GCTATGATGTACTGCAAGTCAGTTGGCTACCCCCAC...TCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | AATACTCAATTCAGTGTAATTCTCCTTGTTGGTGATGAAGAAGCGACCAGAGCTCTTATTGATCCGTTCTaGGCAGCGCCTGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTQFSVILLVGDEEATRALIDPF*AAPGPG Trigger: TCCAGGGCCAGGCGCTGCTCAGAACGGATCAATAAG...AGCTCTGGTCGCTTCTTCATCACCAACAAGGAGAATTACACTGAATTGAGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
||
| CDS-3UTR TCA 90 bp | GAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTTTCGTTTATGGCCAGTaGTGTCAGGAGCAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVQAENLAGHVAIVFQEPFVYGQ*CQEQSW Trigger: CCAACTCTGCTCCTGACATCACTGGCCATAAACGAA...AGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCCACCATTCTCCTTCTTaGGCCATATCCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGPSRKLSRSCCHRFSGTHHSPS*AISTLG Trigger: ACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTG...GGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGGCATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGCACCATTCTCCTTCTTaGGCCATATCCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRHALDGHCGVAHLKGREHHSPS*AISTLG Trigger: ACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTG...CTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATGCCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTGTACTCCATGTTGCTaGCATTCTTACGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVCTPCC*HSYGWQ Trigger: CTGCCACCCGTAAGAATGCCAGCAACATGGAGTACA...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTCGGAGGCAGAGCCAATaGAGTTGGTGGCATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVRRQSQ*SWWHYI Trigger: AATGTAATGCCACCAACTCCATTGGCTCTGCCTCCG...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATCGGAGGCAGAGCCAATaGAGTTGGTGGCATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: HLKGRETKEVQAENLAGHRRQSQ*SWWHYI Trigger: AATGTAATGCCACCAACTCCATTGGCTCTGCCTCCG...ATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | TTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAGAGTTGGTTTTCATTaGCCCAGCTGGTTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPCSQHHQSRALMLLSKERVGFH*PSWFII Trigger: GATGATGAACCAGCTGGGCCAATGAAAACCAACTCT...TTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTACAGTGGTATTCGCCTaGATCCTCAGCTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDQRGPSRKLSRSCCHRFTVVFA*ILSSWL Trigger: AAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGT...AAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACAGTGGTATTCGCCTaGATCCTCAGCTCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRGPSRKLSRSCCHRFSGTVVFA*ILSSWL Trigger: AAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGT...TCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGGAGCGCTGACAAAATaGTATACACAGTGGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGHCGVAHLKGRETKEGALTK*YTQWYS Trigger: CGAATACCACTGTGTATATCATTTTGTCAGCGCTCC...CTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTGGAGCGCTGACAAAATaGTATACACAGTGGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRGALTK*YTQWYS Trigger: CGAATACCACTGTGTATATCATTTTGTCAGCGCTCC...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTTCGTTTATGGCCAGTaGTGTCAGGAGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPSRKLSRSCCHRFSGTFVYGQ*CQEQLS Trigger: TGAAAGCTGCTCCTGACATCACTGGCCATAAACGAA...GGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTATTCGTTTATGGCCAGTaGTGTCAGGAGCAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SITRVELSCCSPRKSQFLFVYGQ*CQEQSW Trigger: CCAACTCTGCTCCTGACATCACTGGCCATAAACGAA...TAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTACACCATTCTCCTTCTTaGGCCATATCCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SITRVELSCCSPRKSQFLHHSPS*AISTLG Trigger: ACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTG...TAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGATGTACTCCATGTTGCTaGCATTCTTACGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRGPSRKLSRSCCHRFSGCTPCC*HSYGWQ Trigger: CTGCCACCCGTAAGAATGCCAGCAACATGGAGTACA...TCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTTGTACTCCATGTTGCTaGCATTCTTACGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETKEVQAENLAGHVAIVFCTPCC*HSYGWQ Trigger: CTGCCACCCGTAAGAATGCCAGCAACATGGAGTACA...AAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CCA 90 bp | GGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAAGCCAATGGAGTTGGTaGCATTACATTCATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHCGVAHLKGRETKEVQASQWSW*HYIHTL Trigger: GAGAGTATGAATGTAATGCCACCAACTCCATTGGCT...TGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCCAGAGCCAATGGAGTTaGTGGCATTACATTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: GRETKEVQAENLAGHVAIQSQWS*WHYIHT Trigger: AGTATGAATGTAATGCCACCAACTCCATTGGCTCTG...GATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGACGGAGGCAGAGCCAATaGAGTTGGTGGCATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: QRGPSRKLSRSCCHRFSGRRQSQ*SWWHYI Trigger: AATGTAATGCCACCAACTCCATTGGCTCTGCCTCCG...TCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGAGTTGGTTTTCATTaGCCCAGCATCAGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCSLERERDQRGPSRKLSRVGFH*PSIRNL Trigger: GAGGTTCCTGATGCTGGGCCAATGAAAACCAACTCT...GCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176557.8 |
||
| CDS-3UTR TCA 90 bp | GAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGCTCTTGGCTTATTaGTCCTGTACTCCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETKEVQAENLAGHVAIVFQLLAY*SCTPCC Trigger: GCAACATGGAGTACAGGATCAATAAGCCAAGAGCTG...AAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCGGAGCGCTGACAAAATaGTATACACAGTGGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: CCSLERERDQRGPSRKLSGALTK*YTQWYS Trigger: CGAATACCACTGTGTATATCATTTTGTCAGCGCTCC...GCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAAATAAGGCATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGTTCGTTTATGGCCAGTaGTGTCAGGAGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLNKACFRRSLWCCSLERFVYGQ*CQEQLS Trigger: TGAAAGCTGCTCCTGACATCACTGGCCATAAACGAA...CCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATGCCTTATTTAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGCTCCAGGATCTTCTGTaGTTTGGAGATTCACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDGHCGVAHLKGRETKELQDLL*FGDSQY Trigger: GTATTGTGAATCTCCAAATCACAGAAGATCCTGGAG...CTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGTCCTGTACTCCATGTTaGTGGCATTCTTACGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAENLAGHVAIVFQEPKESCTPC*WHSYGW Trigger: CCACCCGTAAGAATGCCAGCAACATGGAGTACAGGA...CTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATTTCAATGGTGGCATTTaGTTTAGGAGCGCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RERDQRGPSRKLSRSCCHFNGGI*FRSADK Trigger: TTTGTCAGCGCTCCTAAAGCAAATGCCACCATTGAA...ATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGCACCATTCTCCTTCTTaGGCCATATCCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAENLAGHVAIVFQEPKEHHSPS*AISTLG Trigger: ACCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTG...CTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRFSLRL*PVMSGA Trigger: TGCTCCTGACATCACTGGCCATAAACGAAGTGAAAA...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATAGCCAATGGAGTTGGTaGCATTACATTCATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RERDQRGPSRKLSRSCCHSQWSW*HYIHTL Trigger: GAGAGTATGAATGTAATGCCACCAACTCCATTGGCT...ATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS-3UTR CCA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTAGCCAATGGAGTTGGTaGCATTACATTCATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRSQWSW*HYIHTL Trigger: GAGAGTATGAATGTAATGCCACCAACTCCATTGGCT...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCATTGGCCCAGCTaGTTCATCATCATCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVFHWPS*FIIIRN Trigger: GTTCCTGATGATGATGAACCAGCTGGGCCAATGAAA...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAATTTCATTGGCCCAGCTaGTTCATCATCATCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HALDGHCGVAHLKGRETKFHWPS*FIIIRN Trigger: GTTCCTGATGATGATGAACCAGCTGGGCCAATGAAA...TTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCAGAGTTGGTTTTCATTaGCCCAGCTGGTTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: RGPSRKLSRSCCHRFSGTRVGFH*PSWFII Trigger: GATGATGAACCAGCTGGGCCAATGAAAACCAACTCT...GGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| 3UTR CAA 72 bp | ATTCTGGCCCTGTTCCCTTATGGCCACATTTCTATCTaGCCTTCAGCAGAGATCACACAAAGTACTAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILALFPYGHISI*PSAEITQSTNR Trigger: CCTGTTAGTACTTTGTGTGATCTCTGCTGAAGGCAAGATAGAAATGTGGCCATAAGGGAACAGGGCCAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR CAA 72 bp | CATCACAACTATGTCAGTGCCACATCAGACACAGCTTaGGTTCAAACAGCATGCTCAGGGATGTGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHNYVSATSDTA*VQTACSGMWYE Trigger: TTCATACCACATCCCTGAGCATGCTGTTTGAACCAAAGCTGTGTCTGATGTGGCACTGACATAGTTGTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| 3UTR CAA 72 bp | CCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTaGCTCTCCAAGGAAAAGCCAATTTCTACTAATACA | + |
|
Preference number: 4 (lower is better) Translates to: PCSQHHQSRALM*LSKEKPISTNT Trigger: TGTATTAGTAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATCATACATATATACTGCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTACACTGCAGGGTaGCAGGAAGGAGGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: INHTYILQFILAVQWTVPGYTAG*QEGGFL Trigger: GAGAAAGCCTCCTTCCTGTCACCCTGCAGTGTAACC...TGGAACAGTCCACTGAACGGCTAGAATGAATTGCAGTATATATGTATGATTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTCTCCAGGATCTTCTGTaGTTTGGAGATTCACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVLQDLL*FGDSQY Trigger: GTATTGTGAATCTCCAAATCACAGAAGATCCTGGAG...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS-3UTR CCA 90 bp | TGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCTTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCSLERERDQRGPSRKLSFSLRL*PVMSGA Trigger: TGCTCCTGACATCACTGGCCATAAACGAAGTGAAAA...GCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTCAGAGCCAATGGAGTTaGTGGCATTACATTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RETKEVQAENLAGHVAIVQSQWS*WHYIHT Trigger: AGTATGAATGTAATGCCACCAACTCCATTGGCTCTG...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTCAGAGCCAATGGAGTTaGTGGCATTACATTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: EVQAENLAGHVAIVFQEPQSQWS*WHYIHT Trigger: AGTATGAATGTAATGCCACCAACTCCATTGGCTCTG...AGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATCAGAGCCAATGGAGTTaGTGGCATTACATTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: HLKGRETKEVQAENLAGHQSQWS*WHYIHT Trigger: AGTATGAATGTAATGCCACCAACTCCATTGGCTCTG...ATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGATTCGGAGGCAGAGCCAATaGAGTTGGTGGCATTACATT | + |
|
Preference number: 4 (lower is better) Translates to: AENLAGHVAIVFQEPKEIRRQSQ*SWWHYI Trigger: AATGTAATGCCACCAACTCCATTGGCTCTGCCTCCG...AATCTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTAGAGTTGGTTTTCATTaGCCCAGCTGGTTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: ETKEVQAENLAGHVAIVFRVGFH*PSWFII Trigger: GATGATGAACCAGCTGGGCCAATGAAAACCAACTCT...AAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGATTCAGCTCTTGGCTTATTaGTCCTGTACTCCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AENLAGHVAIVFQEPKEIQLLAY*SCTPCC Trigger: GCAACATGGAGTACAGGATCAATAAGCCAAGAGCTG...AATCTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
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| CDS-3UTR TCA 90 bp | GCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGATTTTCGTTTATGGCCAGTaGTGTCAGGAGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AENLAGHVAIVFQEPKEIFVYGQ*CQEQLS Trigger: TGAAAGCTGCTCCTGACATCACTGGCCATAAACGAA...AATCTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
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| CDS-3UTR TCA 90 bp | GCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAAGTTATACGGTCTCCAGGATCTTCTGTaGTTTGGAGATTCACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: AIHSSRSVDCSRFLKLYGLQDLL*FGDSQY Trigger: GTATTGTGAATCTCCAAATCACAGAAGATCCTGGAG...ACCGTATAACTTTAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGACTCCAGGATCTTCTGTaGTTTGGAGATTCACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QRGPSRKLSRSCCHRFSGLQDLL*FGDSQY Trigger: GTATTGTGAATCTCCAAATCACAGAAGATCCTGGAG...TCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS-3UTR CCA 90 bp | CAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGATTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRGPSRKLSRSCCHRFSGFSLRL*PVMSGA Trigger: TGCTCCTGACATCACTGGCCATAAACGAAGTGAAAA...TCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS-3UTR CCA 90 bp | AGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTAGCCAATGGAGTTGGTaGCATTACATTCATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDQRGPSRKLSRSCCHRFSQWSW*HYIHTL Trigger: GAGAGTATGAATGTAATGCCACCAACTCCATTGGCT...AAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS-3UTR CCA 90 bp | GCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAAGTTATACGGTCAGAGCCAATGGAGTTaGTGGCATTACATTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: AIHSSRSVDCSRFLKLYGQSQWS*WHYIHT Trigger: AGTATGAATGTAATGCCACCAACTCCATTGGCTCTG...ACCGTATAACTTTAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
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| CDS-3UTR GCA 90 bp | GAGTTGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGGAGATTCTTCAATGGTGGCATTTaGTTTAGGAGCGCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELVALHSYSPGSSVIWRFFNGGI*FRSADK Trigger: TTTGTCAGCGCTCCTAAAGCAAATGCCACCATTGAA...GAATCTCCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175945.7 |
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| CDS-3UTR CCA 90 bp | CAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGTTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAENLAGHVAIVFQEPKEFSLRL*PVMSGA Trigger: TGCTCCTGACATCACTGGCCATAAACGAAGTGAAAA...CTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| 3UTR CAA 72 bp | TCCAGACATTTGGGATGCAGAAACAGGACCGTGGATTaGAGATTAACCTGTGTTTTTGGTTTGGGTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRHLGCRNRTVD*RLTCVFGLGVF Trigger: AAAAACACCCAAACCAAAAACACAGGTTAATCTCAAATCCACGGTCCTGTTTCTGCATCCCAAATGTCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CAA 72 bp | TATGGCAAGATGGGAAGCAGAGATAAAGAACGTTGCTaGATTCAATGGCCAAAAACAATGAGATTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGKMGSRDKERC*IQWPKTMRFCL Trigger: GAGACAGAATCTCATTGTTTTTGGCCATTGAATCAAGCAACGTTCTTTATCTCTGCTTCCCATCTTGCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| CDS-3UTR CCA 90 bp | GGAAAAGTTTGCATGTCTCTGTCAAATTACTCAGATCACCACCATCAAACAAAATTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKVCMSLSNYSDHHHQTKFSLRL*PVMSGA Trigger: TGCTCCTGACATCACTGGCCATAAACGAAGTGAAAA...TTTTGTTTGATGGTGGTGATCTGAGTAATTTGACAGAGACATGCAAACTTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| 3UTR CAA 72 bp | GACATTTATAACAAAAAGCGAAACAACCAAGGCCAATaGAAGGAGAATGCATTAATTGTAGTACATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DIYNKKRNNQGQ*KENALIVVHLH Trigger: GTGCAGATGTACTACAATTAATGCATTCTCCTTCAATTGGCCTTGGTTGTTTCGCTTTTTGTTATAAATGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| CDS CCA 90 bp | CATGGGCGACTTGACAAACCCAGCGTTCTGAGCAGCGCCTGGCCCTaGAAGGAGCGAGCCAGAGACCAGCAAGAGCGAGAGGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGRLDKPSVLSSAWP*KERARDQQEREGQG Trigger: GCCCTGGCCCTCTCGCTCTTGCTGGTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCTCAGAACGCTGGGTTTGTCAAGTCGCCCATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS GCA 90 bp | GACACGGCGCTTCCGAGCACCGTCCCACAGCTGTCTGAAAGACTCTaGCCGGTTGACTTCTGCGTACCACCACTGGATCTCTGGCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTALPSTVPQLSERL*PVDFCVPPLDLWRG Trigger: CCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTTCAGACAGCTGTGGGACGGTGCTCGGAAGCGCCGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS TCA 90 bp | GTCCTCCAAGGTGAGCCGGGTTATTCTCAGCACACTCACGCCGTTTaGCCCGTAGGCGGTGTTTACGGTGACACGGCGCTTCCGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VLQGEPGYSQHTHAV*PVGGVYGDTALPST Trigger: GGTGCTCGGAAGCGCCGTGTCACCGTAAACACCGCCTACGGGTCAAACGGCGTGAGTGTGCTGAGAATAACCCGGCTCACCTTGGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS GCA 90 bp | AGCACCGTCCCACAGCTGTCTGAAAGACTCTGCCCGGTTGACTTCTaGGTACCACCACTGGATCTCTGGCGTGGGACTCCCGACCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: STVPQLSERLCPVDF*VPPLDLWRGTPDHV Trigger: GACGTGGTCGGGAGTCCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTTCAGACAGCTGTGGGACGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 90 bp | TTCACTGGTGACAATTCTTGGTTCGTTCTGAGCAGCGCCTGGCCCTaGAAGGAGCGAGCCAGAGACCAGCAAGAGCGAGAGGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FTGDNSWFVLSSAWP*KERARDQQEREGQG Trigger: GCCCTGGCCCTCTCGCTCTTGCTGGTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCTCAGAACGAACCAAGAATTGTCACCAGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177380.8 |
||
| CDS CCA 90 bp | GAAAGACTCTGCCCGGTTGACTTCTGCGTACCACCACTGGATCTCTaGCGTGGGACTCCCGACCACGTCACAGTACAGCTCAAAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERLCPVDFCVPPLDL*RGTPDHVTVQLKGV Trigger: GACGCCTTTGAGCTGTACTGTGACGTGGTCGGGAGTCCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS TCA 90 bp | CACGTCACAGTACAGCTCAAAGGCGTCCCCCGTGAGCTTAGTTTCTaGCATGGGCGACTTGACAAACCCAGCGTTCTGAGCAGCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HVTVQLKGVPRELSF*HGRLDKPSVLSSAW Trigger: CCAGGCGCTGCTCAGAACGCTGGGTTTGTCAAGTCGCCCATGTCAGAAACTAAGCTCACGGGGGACGCCTTTGAGCTGTACTGTGACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 90 bp | AGCTGTCTGAAAGACTCTGCCCGGTTGACTTCTGCGTACCACCACTaGATCTCTGGCGTGGGACTCCCGACCACGTCACAGTACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLKDSARLTSAYHH*ISGVGLPTTSQYSS Trigger: TGAGCTGTACTGTGACGTGGTCGGGAGTCCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTTCAGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS GCA 90 bp | ACGCTTATGGTGGCCTGGGCTCGAATCCATGTTATGGAAGGGTTTTaGCTCAAGTCATTCCTCTTGGGGTCGTTGCTGGCCCTGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLMVAWARIHVMEGF*LKSFLLGSLLALHS Trigger: CGAGTGCAGGGCCAGCAACGACCCCAAGAGGAATGACTTGAGGCAAAACCCTTCCATAACATGGATTCGAGCCCAGGCCACCATAAGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 90 bp | GTTTCTGAAGGACGCTTATGGTGGCCTGGGCTCGAATCCATGTTATaGAAGGGTTTTGCCTCAAGTCATTCCTCTTGGGGTCGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSEGRLWWPGLESML*KGFASSHSSWGRCW Trigger: CCAGCAACGACCCCAAGAGGAATGACTTGAGGCAAAACCCTTCCATAACATGGATTCGAGCCCAGGCCACCATAAGCGTCCTTCAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCAGAGGTTACCATGCAGCCAGCATCACCAGAGTAGAGCTCTCATGTTGGCAGAGCCAATGGAGTaGGTGGCATTACATTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: GGQRLPCSQHHQSRALMLAEPME*VALHSY Trigger: GTATGAATGTAATGCCACCAACTCCATTGGCTCTGC...CAACATGAGAGCTCTACTCTGGTGATGCTGGCTGCATGGTAACCTCTGGCCTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCACACCATTCTCCTTCTaGCGCCATATCCACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRETKEVQAENLAGHVAITPFSF*RHIHSG Trigger: CCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTGT...GATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTACACCATTCTCCTTCTaGCGCCATATCCACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRTPFSF*RHIHSG Trigger: CCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTGT...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGCAGAGCCAATGGAGTaGGTGGCATTACATTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: GRETKEVQAENLAGHVAIAEPME*VALHSY Trigger: GTATGAATGTAATGCCACCAACTCCATTGGCTCTGC...GATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCATCCTGTACTCCATGTaGCTGGCATTCTTACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPSRKLSRSCCHRFSGTILYSM*LAFLRV Trigger: CACCCGTAAGAATGCCAGCAACATGGAGTACAGGAT...GGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTATCCTGTACTCCATGTaGCTGGCATTCTTACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EVQAENLAGHVAIVFQEPILYSM*LAFLRV Trigger: CACCCGTAAGAATGCCAGCAACATGGAGTACAGGAT...AGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176557.8 ENSMUST00000176896.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCACCAGAGTAGAGCTCTCATGTTGCTCTCCAAGGAAAAGCCAATTTCTAACACCATTCTCCTTCTaGCGCCATATCCACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SITRVELSCCSPRKSQFLTPFSF*RHIHSG Trigger: CCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTGT...TAGAAATTGGCTTTTCCTTGGAGAGCAACATGAGAGCTCTACTCTGGTGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS GCA 90 bp | ATGGCCAGTGATGTCAGGAGCAGCTTTCACTTCAATGGTGGCATTTaGTTTAGGAGCGCTGACAAAATGATATACACAGTGGTATTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: MASDVRSSFHFNGGI*FRSADKMIYTVVFA Trigger: GGCGAATACCACTGTGTATATCATTTTGTCAGCGCTCCTAAAGCAAATGCCACCATTGAAGTGAAAGCTGCTCCTGACATCACTGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 |
||
| CDS CCA 90 bp | GTTGGTAGAGTTGGTTTTCATTGGCCCAGCATCAGGAACCTCATCTaGCCTCTTCCTCTTCTCATACACAACAATGATCACCACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGRVGFHWPSIRNLI*PLPLLIHNNDHHKD Trigger: ATCCTTGTGGTGATCATTGTTGTGTATGAGAAGAGGAAGAGGCCAGATGAGGTTCCTGATGCTGGGCCAATGAAAACCAACTCTACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176557.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTGCAGAGCCAATGGAGTaGGTGGCATTACATTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: RETKEVQAENLAGHVAIVAEPME*VALHSY Trigger: GTATGAATGTAATGCCACCAACTCCATTGGCTCTGC...AACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGCAGAGCCAATGGAGTaGGTGGCATTACATTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: HLKGRETKEVQAENLAGHAEPME*VALHSY Trigger: GTATGAATGTAATGCCACCAACTCCATTGGCTCTGC...ATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTTCAGGAACCTAAAGAGATGTCAGGAGCAGAGTaGGGAAGGTCCACTACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QAENLAGHVAIVFQEPKEMSGAE*GRSTTD Trigger: GTCAGTAGTGGACCTTCCCAACTCTGCTCCTGACAT...CTCTTTAGGTTCCTGAAAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176250.2 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTTTTGCAGAGCCAATGGAGTaGGTGGCATTACATTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: RDQRGPSRKLSRSCCHRFAEPME*VALHSY Trigger: GTATGAATGTAATGCCACCAACTCCATTGGCTCTGC...AAAACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS TCA 90 bp | TGCTTTAGGAGCGCTGACAAAATGATATACACAGTGGTATTCGCCTaGATCCTCAGCTCTTGGCTTATTGATCCTGTACTCCATGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CFRSADKMIYTVVFA*ILSSWLIDPVLHVA Trigger: AGCAACATGGAGTACAGGATCAATAAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGTGTATATCATTTTGTCAGCGCTCCTAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 ENSMUST00000177380.8 |
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| CDS TCA 90 bp | GCTTTCACTTCAATGGTGGCATTTGCTTTAGGAGCGCTGACAAAATaGTATACACAGTGGTATTCGCCTGAATCCTCAGCTCTTGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFTSMVAFALGALTK*YTQWYSPESSALGL Trigger: TAAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGTGTATATCATTTTGTCAGCGCTCCTAAAGCAAATGCCACCATTGAAGTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 ENSMUST00000177380.8 |
||
| CDS CCA 90 bp | GCGCAAGTTTTTATCTTTGTGATTGTTGGTAGAGTTGGTTTTCATTaGCCCAGCTGGTTCATCATCATCAGGAACCTCATCTGGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQVFIFVIVGRVGFH*PSWFIIIRNLIWPL Trigger: AAGAGGCCAGATGAGGTTCCTGATGATGATGAACCAGCTGGGCCAATGAAAACCAACTCTACCAACAATCACAAAGATAAAAACTTGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176916.8 ENSMUST00000177064.8 ENSMUST00000177292.8 |
||
| CDS CCA 90 bp | GTTGGTAGAGTTGGTTTTCCTTACACCTTCATCAGGAACCTCATCTaGCCTCTTCCTCTTCTCATACACAACAATGATCACCACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGRVGFPYTFIRNLI*PLPLLIHNNDHHKD Trigger: ATCCTTGTGGTGATCATTGTTGTGTATGAGAAGAGGAAGAGGCCAGATGAGGTTCCTGATGAAGGTGTAAGGAAAACCAACTCTACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114121.11 |
||
| CDS-3UTR CAA 90 bp | GGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAAGGATCTTCTGTGATTaGGAGATTCACAATACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GHCGVAHLKGRETKEVQARIFCD*EIHNTQ Trigger: TTGAGTATTGTGAATCTCCAAATCACAGAAGATCCT...TGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAATGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGGCATGCTTTAGACGGTCATTGTGGTGTTGCTCACTTGAAAGGGAGAGAGTCCTGCCCTTCATTTTaGTTTTCACTTCGTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: IRHALDGHCGVAHLKGRESCPSF*FSLRLW Trigger: CCATAAACGAAGTGAAAACAAAAATGAAGGGCAGGA...CTCTCTCCCTTTCAAGTGAGCAACACCACAATGACCGTCTAAAGCATGCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATTCCTGCCCTTCATTTTaGTTTTCACTTCGTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: HLKGRETKEVQAENLAGHSCPSF*FSLRLW Trigger: CCATAAACGAAGTGAAAACAAAAATGAAGGGCAGGA...ATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGTGTTGCTCACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAATCCTGCCCTTCATTTTaGTTTTCACTTCGTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: LWCCSLERERDQRGPSRKSCPSF*FSLRLW Trigger: CCATAAACGAAGTGAAAACAAAAATGAAGGGCAGGA...TTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTGAGCAACACCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | ATCAATCATACATATATACTGCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAACACCATTCTCCTTCTaGCGCCATATCCACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: INHTYILQFILAVQWTVPTPFSF*RHIHSG Trigger: CCCAGAGTGGATATGGCGCAAGAAGGAGAATGGTGT...TGGAACAGTCCACTGAACGGCTAGAATGAATTGCAGTATATATGTATGATTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATGTTGCCATCGTAGGATCTTCTGTGATTaGGAGATTCACAATACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ERDQRGPSRKLSRSCCHRRIFCD*EIHNTQ Trigger: TTGAGTATTGTGAATCTCCAAATCACAGAAGATCCT...ACGATGGCAACATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
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| CDS-3UTR CAA 90 bp | ATCAATCATACATATATACTGCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAATGTCAGGAGCAGAGTaGGGAAGGTCCACTACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: INHTYILQFILAVQWTVPMSGAE*GRSTTD Trigger: GTCAGTAGTGGACCTTCCCAACTCTGCTCCTGACAT...TGGAACAGTCCACTGAACGGCTAGAATGAATTGCAGTATATATGTATGATTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
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| CDS CCA 90 bp | TACATCATAGCATCCTGCCCTTCATTTTTGTTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCAGCTTTCACTTCAATGGTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YIIASCPSFLFSLRL*PVMSGAAFTSMVAF Trigger: AAATGCCACCATTGAAGTGAAAGCTGCTCCTGACATCACTGGCCATAAACGAAGTGAAAACAAAAATGAAGGGCAGGATGCTATGATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 |
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| CDS-3UTR CAA 90 bp | CACTTGAAAGGGAGAGAGACCAAAGAGGTCCAAGCAGAAAACTTAGCAGGTCATAGGATCTTCTGTGATTaGGAGATTCACAATACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HLKGRETKEVQAENLAGHRIFCD*EIHNTQ Trigger: TTGAGTATTGTGAATCTCCAAATCACAGAAGATCCT...ATGACCTGCTAAGTTTTCTGCTTGGACCTCTTTGGTCTCTCTCCCTTTCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000176916.8 |
||
| CDS-3UTR CAA 90 bp | TACATATATACTGCAATTCATTCTAGCCGTTCAGTGGACTGTTCCAGGTTCCTAAGGATCTTCTGTGATTaGGAGATTCACAATACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YIYTAIHSSRSVDCSRFLRIFCD*EIHNTQ Trigger: TTGAGTATTGTGAATCTCCAAATCACAGAAGATCCT...TAGGAACCTGGAACAGTCCACTGAACGGCTAGAATGAATTGCAGTATATATGTA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176557.8 |
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| CDS-3UTR CAA 90 bp | GTAGTCAACCCATTTCTTCCATTCAGAATCCAGCTTCACATGAGGAATGCTATTAGGATCTTCTGTGATTaGGAGATTCACAATACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VVNPFLPFRIQLHMRNAIRIFCD*EIHNTQ Trigger: TTGAGTATTGTGAATCTCCAAATCACAGAAGATCCT...AATAGCATTCCTCATGTGAAGCTGGATTCTGAATGGAAGAAATGGGTTGACTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176250.2 |
||
| CDS TCA 72 bp | CACTCACGCCGTTTGACCCGTAGGCGGTGTTTACGGTaGCACGGCGCTTCCGAGCACCGTCCCACAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSRRLTRRRCLR*HGASEHRPTAV Trigger: GACAGCTGTGGGACGGTGCTCGGAAGCGCCGTGTCACCGTAAACACCGCCTACGGGTCAAACGGCGTGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 72 bp | GGGCGACTTGACAAACCCAGCGTTCTGAGCAGCGCCTaGCCCTGGAAGGAGCGAGCCAGAGACCAGCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRLDKPSVLSSA*PWKERARDQQE Trigger: CTCTTGCTGGTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCTCAGAACGCTGGGTTTGTCAAGTCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 72 bp | TGCCCGGTTGACTTCTGCGTACCACCACTGGATCTCTaGCGTGGGACTCCCGACCACGTCACAGTACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CPVDFCVPPLDL*RGTPDHVTVQL Trigger: GAGCTGTACTGTGACGTGGTCGGGAGTCCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS TCA 72 bp | GGTGAGCCGGGTTATTCTCAGCACACTCACGCCGTTTaGCCCGTAGGCGGTGTTTACGGTGACACGGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GEPGYSQHTHAV*PVGGVYGDTAL Trigger: AAGCGCCGTGTCACCGTAAACACCGCCTACGGGTCAAACGGCGTGAGTGTGCTGAGAATAACCCGGCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS GCA 72 bp | CCACAGCTGTCTGAAAGACTCTGCCCGGTTGACTTCTaGGTACCACCACTGGATCTCTGGCGTGGGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQLSERLCPVDF*VPPLDLWRGTP Trigger: GGGAGTCCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTTCAGACAGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 72 bp | AAAGACTCTGCCCGGTTGACTTCTGCGTACCACCACTaGATCTCTGGCGTGGGACTCCCGACCACGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: KDSARLTSAYHH*ISGVGLPTTSQ Trigger: CTGTGACGTGGTCGGGAGTCCCACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CAA 72 bp | GCACCGTCCCACAGCTGTCTGAAAGACTCTGCCCGGTaGACTTCTGCGTACCACCACTGGATCTCTGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: APSHSCLKDSAR*TSAYHHWISGV Trigger: CACGCCAGAGATCCAGTGGTGGTACGCAGAAGTCAACCGGGCAGAGTCTTTCAGACAGCTGTGGGACGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 72 bp | ACTGGTGACAATTCTTGGTTCGTTCTGAGCAGCGCCTaGCCCTGGAAGGAGCGAGCCAGAGACCAGCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGDNSWFVLSSA*PWKERARDQQE Trigger: CTCTTGCTGGTCTCTGGCTCGCTCCTTCCAGGGCCAGGCGCTGCTCAGAACGAACCAAGAATTGTCACCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177380.8 |
||
| CDS CAA 90 bp | GACGCTTATGGTGGCCTGGGCTCGAATCCATGTTATGGAAGGGTTTaGCCTCAAGTCATTCCTCTTGGGGTCGTTGCTGGCCCTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: DAYGGLGSNPCYGRV*PQVIPLGVVAGPAL Trigger: GAGTGCAGGGCCAGCAACGACCCCAAGAGGAATGACTTGAGGCAAAACCCTTCCATAACATGGATTCGAGCCCAGGCCACCATAAGCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CAA 72 bp | GGTGGCCTGGGCTCGAATCCATGTTATGGAAGGGTTTaGCCTCAAGTCATTCCTCTTGGGGTCGTTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGLGSNPCYGRV*PQVIPLGVVAG Trigger: GCCAGCAACGACCCCAAGAGGAATGACTTGAGGCAAAACCCTTCCATAACATGGATTCGAGCCCAGGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS CCA 72 bp | GGACGCTTATGGTGGCCTGGGCTCGAATCCATGTTATaGAAGGGTTTTGCCTCAAGTCATTCCTCTTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRLWWPGLESML*KGFASSHSSWG Trigger: ACCCCAAGAGGAATGACTTGAGGCAAAACCCTTCCATAACATGGATTCGAGCCCAGGCCACCATAAGCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177292.8 |
||
| CDS TCA 72 bp | TGTACTCCATGTTGCTGGCATTCTTACGGGTGGCAGTaGGTTCTACCCCATTCCTTGTCCAGTAGCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: CTPCCWHSYGWQ*VLPHSLSSSCT Trigger: TGTACAGCTACTGGACAAGGAATGGGGTAGAACTCACTGCCACCCGTAAGAATGCCAGCAACATGGAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 ENSMUST00000177380.8 |
||
| CDS CAA 90 bp | TTCATCATCCTGAGGACGGTGGAAACGGAGGCAGAGCCAATGGAGTaGGTGGCATTACATTCATACTCTCCAGGATCTTCTGTGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FIILRTVETEAEPME*VALHSYSPGSSVIW Trigger: CCAAATCACAGAAGATCCTGGAGAGTATGAATGTAATGCCACCAACTCCATTGGCTCTGCCTCCGTTTCCACCGTCCTCAGGATGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176896.8 |
||
| CDS TCA 72 bp | AGCGCTGACAAAATGATATACACAGTGGTATTCGCCTaGATCCTCAGCTCTTGGCTTATTGATCCTGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: SADKMIYTVVFA*ILSSWLIDPVL Trigger: GAGTACAGGATCAATAAGCCAAGAGCTGAGGATTCAGGCGAATACCACTGTGTATATCATTTTGTCAGCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 ENSMUST00000177380.8 |
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| CDS TCA 72 bp | TCAATGGTGGCATTTGCTTTAGGAGCGCTGACAAAATaGTATACACAGTGGTATTCGCCTGAATCCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SMVAFALGALTK*YTQWYSPESSA Trigger: AGCTGAGGATTCAGGCGAATACCACTGTGTATATCATTTTGTCAGCGCTCCTAAAGCAAATGCCACCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000175945.7 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 ENSMUST00000177380.8 |
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| CDS TCA 72 bp | GCCCTTCATTTTTGTTTTCACTTCGTTTATGGCCAGTaGTGTCAGGAGCAGCTTTCACTTCAATGGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: ALHFCFHFVYGQ*CQEQLSLQWWH Trigger: ATGCCACCATTGAAGTGAAAGCTGCTCCTGACATCACTGGCCATAAACGAAGTGAAAACAAAAATGAAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 |
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| CDS GCA 72 bp | GATGTCAGGAGCAGCTTTCACTTCAATGGTGGCATTTaGTTTAGGAGCGCTGACAAAATGATATACACAGTG | + |
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Preference number: 6 (lower is better) Translates to: DVRSSFHFNGGI*FRSADKMIYTV Trigger: CACTGTGTATATCATTTTGTCAGCGCTCCTAAAGCAAATGCCACCATTGAAGTGAAAGCTGCTCCTGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 |
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| CDS CCA 72 bp | GCATCCTGCCCTTCATTTTTGTTTTCACTTCGTTTATaGCCAGTGATGTCAGGAGCAGCTTTCACTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: ASCPSFLFSLRL*PVMSGAAFTSM Trigger: CATTGAAGTGAAAGCTGCTCCTGACATCACTGGCCATAAACGAAGTGAAAACAAAAATGAAGGGCAGGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000114121.11 ENSMUST00000176557.8 ENSMUST00000176896.8 ENSMUST00000177292.8 |
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| CDS CCA 72 bp | GTTGGTTTTCCTTACACCTTCATCAGGAACCTCATCTaGCCTCTTCCTCTTCTCATACACAACAATGATCAC | + |
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Preference number: 6 (lower is better) Translates to: VGFPYTFIRNLI*PLPLLIHNNDH Trigger: GTGATCATTGTTGTGTATGAGAAGAGGAAGAGGCCAGATGAGGTTCCTGATGAAGGTGTAAGGAAAACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114121.11 |
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| CDS CCA 72 bp | TTTATCTTTGTGATTGTTGGTAGAGTTGGTTTTCATTaGCCCAGCTGGTTCATCATCATCAGGAACCTCATC | + |
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Preference number: 6 (lower is better) Translates to: FIFVIVGRVGFH*PSWFIIIRNLI Trigger: GATGAGGTTCCTGATGATGATGAACCAGCTGGGCCAATGAAAACCAACTCTACCAACAATCACAAAGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085651.12 ENSMUST00000176250.2 ENSMUST00000176916.8 ENSMUST00000177064.8 ENSMUST00000177292.8 |
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