Pregenerated sensors for NPRL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010057Ensembl transcript IDs: ENSMUST00000010201.9, ENSMUST00000195370.6
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCAGGTTCTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTaGCTCAGCGGAGATCTTCTGGACATGGCGAAACCCGTCAATGTA | + |
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Preference number: 1 (lower is better) Translates to: QQVLNGDAHQVEFHV*LSGDLLDMAKPVNV Trigger: TACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| 3UTR TCA 90 bp | CAACACCATAGTACAGCAGGTTCTGAATGGCGATGCGCACCAGGTTaGGTTCCACGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGAA | + |
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Preference number: 1 (lower is better) Translates to: QHHSTAGSEWRCAPG*VPRLPQRRSSGHGE Trigger: TTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTACTATGGTGTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| 3UTR-3UTR TCA 90 bp | CGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGAAACCCGTCAATGTAGGGCAGGTCCCACTGTGAGCTaGAGAAATCCTCCTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RLPQRRSSGHGETRQCRAGPTVS*RNPPCP Trigger: AGGACAAGGAGGATTTCTTCAGCTCACAGTGGGACC...TGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| 3UTR-3UTR TCA 90 bp | CGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGAAACCCGTCAATGTAGGGCAGGTAAGGTCCCACTGTaGGCTGAAGAAATCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RLPQRRSSGHGETRQCRAGKVPL*AEEILL Trigger: AAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACC...TGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| 3UTR GCA 72 bp | CTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTaGCTCAGCGGAGATCTTCTGGACATGGCGAAACCC | + |
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Preference number: 3 (lower is better) Translates to: LNGDAHQVEFHV*LSGDLLDMAKP Trigger: GGGTTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| 3UTR TCA 72 bp | AGTACAGCAGGTTCTGAATGGCGATGCGCACCAGGTTaGGTTCCACGTCTGCCTCAGCGGAGATCTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: STAGSEWRCAPG*VPRLPQRRSSG Trigger: TCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| 3UTR TCA 72 bp | GTAGGGCAGGATCTGCTGTGTGGTAAGGTCCCACTGTaGGCTGAAGAAATCCTCCTTGTCCTTTGTAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: VGQDLLCGKVPL*AEEILLVLCKD Trigger: GTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACCACACAGCAGATCCTGCCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR TCA 90 bp | GCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGGCACAAGTCTTAGCCTaGGCGTCACACACAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: AHQVEFHVCLSGDLLDMAAQVLA*ASHTKP Trigger: GGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGC...CGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CCA 90 bp | ATGGCGAAACCCGTCAATGTAGGGCAGGATCTGCTGTGTGGTAAGGTCCCACTGCTGCTCGATCACCAATaGGCAGAGTGCAGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: MAKPVNVGQDLLCGKVPLLLDHQ*AECSGR Trigger: CCGGCCGCTGCACTCTGCCCATTGGTGATCGAGCAG...CAGTGGGACCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR GCA 90 bp | ATGGCGAAACCCGTCAATGTAGGGCAGGATCTGCTGTGTGGTAAGGTCCCACTGCACCAATGGGCAGAGTaGAGCGGCCGGAGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: MAKPVNVGQDLLCGKVPLHQWAE*SGRRHS Trigger: TGAATGCCTCCGGCCGCTGCACTCTGCCCATTGGTG...CAGTGGGACCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR GCA 90 bp | GGAGATCTTCTGGACATGGCGAAACCCGTCAATGTAGGGCAGGATCTGCTGTGTGGAGGGTCTGGCCGCTaGTCGATCACCAATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GDLLDMAKPVNVGQDLLCGGSGR*SITNGQ Trigger: CTGCCCATTGGTGATCGAGCAGCGGCCAGACCCTCC...ACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CCA 90 bp | CTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTTCTCAAGCTCCAGCGTaGTCAAGTAGCCGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LNGDAHQVEFHVCLSGDLSQAPA*SSSRPA Trigger: AGCTGGCCGGCTACTTGACCACGCTGGAGCTTGAGA...AAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR GCA 90 bp | GCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGGCACCAGCTTCTGCTTaGTCTCCTCGTTGGATACAA | + |
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Preference number: 4 (lower is better) Translates to: AHQVEFHVCLSGDLLDMAAPASA*SPRWIQ Trigger: TTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGC...CGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTAGCCAGCAGCCCGTGTAAAGCCTaGCAGGGTGGCTCCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KEALVGASSHSNMFQLASSPCKA*QGGSAP Trigger: AGGAGCGGAGCCACCCTGCCAGGCTTTACACGGGCT...GCTGGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | CAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCGGGGGTGGCGGCCAATaGGGTCTCGCACAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: QNRVSPSRPYVQPYLSSSGGGGQ*GLAQWY Trigger: GTACCACTGTGCGAGACCTCATTGGCCGCCACCCCC...GGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | TGGACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTAGGAGGGTCTGGCCGCTaGTCGATCACCTTCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: WTKEALVGASSHSNMFQLGGSGR*SITFKW Trigger: CCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCC...TAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | GTTCTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATGGTCCCAGCGTTGGGTaGAACTCGCTGAAGAATATA | + |
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Preference number: 4 (lower is better) Translates to: VLNGDAHQVEFHVCLSGDGPSVG*NSLKNI Trigger: TATATTCTTCAGCGAGTTCCACCCAACGCTGGGACC...ATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CCA 90 bp | GTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCATGTAACTGCTGGGGGTaGCGGCCAATGAGGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VSPSRPYVQPYLSSSSGPCNCWG*RPMRSR Trigger: GCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACA...TGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | CACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGAAAACAGTTCTCGCGAGATaGAATCCTCAGGGACCTGAT | + |
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Preference number: 4 (lower is better) Translates to: HQVEFHVCLSGDLLDMAKTVLAR*NPQGPD Trigger: ATCAGGTCCCTGAGGATTTCATCTCGCGAGAACTGT...TTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR GCA 90 bp | GATGCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTCTGGACATGACTTCTTGTGTTCAATaGACACGGGGCAGCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: DAHQVEFHVCLSGDLLDMTSCVQ*TRGSQS Trigger: TGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGT...CATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR GCA 90 bp | ACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTAGCCTCAACGTGTTGTAACTaGTGGGGGTGGCGGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: TKEALVGASSHSNMFQLASTCCN*WGWRPM Trigger: CATTGGCCGCCACCCCCAGCAGTTACAACACGTTGA...GGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | CGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGATCTCAAGCTCCAGCGTaGTCAAGTAGCCGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RVSPSRPYVQPYLSSSSGSQAPA*SSSRPA Trigger: AGCTGGCCGGCTACTTGACCACGCTGGAGCTTGAGA...TCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | CTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTGCTTGCTCTCCTCGTTaGATACAAAGCTGCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LNGDAHQVEFHVCLSGDLACSPR*IQSCSQ Trigger: TTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGC...AAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CCA 90 bp | CACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAAGGAACGTGTTGTAACTGCTaGGGGTGGCGGCCAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: HPPDHMYNHTCLAPVDQGTCCNC*GWRPMR Trigger: CCTCATTGGCCGCCACCCCCAGCAGTTACAACACGT...TCCTTGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | GTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAACACAAAGCCCAGGTTaGAGAGGAGAGCATTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VSPSRPYVQPYLSSSSGPTQSPG*RGEHCG Trigger: GCCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGT...TGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | ACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTAGCCTTTGGGTCCCAGCGTTaGGTGGAACTCGCTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TKEALVGASSHSNMFQLAFGSQR*VELAEE Trigger: TTCTTCAGCGAGTTCCACCCAACGCTGGGACCCAAA...GGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | TGTCACAACACCATAGTACAGCAGGTTCTGAATGGCGATGCGCACCAGGTTGAGTTTGGGTCCCAGCGTTaGGTGGAACTCGCTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: CHNTIVQQVLNGDAHQVEFGSQR*VELAEE Trigger: TTCTTCAGCGAGTTCCACCCAACGCTGGGACCCAAA...CTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTACTATGGTGTTGTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CCA 90 bp | CGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGATGTTGGATTCATCAATaGGCAGAGTGCAGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RVSPSRPYVQPYLSSSSGCWIHQ*AECSGR Trigger: CCGGCCGCTGCACTCTGCCCATTGATGAATCCAACA...TCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | CGGAGATCTTCTGGACATGGCGAAACCCGTCAATGTAGGGCAGGATCTGCTGTGTTGGGTGGAACTCGCTaGAGAATATACATTCGATGC | + |
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Preference number: 4 (lower is better) Translates to: RRSSGHGETRQCRAGSAVLGGTR*RIYIRC Trigger: GCATCGAATGTATATTCTTCAGCGAGTTCCACCCAA...CACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR GCA 90 bp | TCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAAATGGGCACCAGCTTCTaGTTGCTCTCCTCGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SHPPDHMYNHTCLAPVDQMGTSF*LLSSLD Trigger: ATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCAT...TTGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | CGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGATACCAGGGCTCAGGCTaGAGTATAGCTGGAACACAT | + |
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Preference number: 4 (lower is better) Translates to: RVSPSRPYVQPYLSSSSGYQGSG*SIAGTH Trigger: ATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTA...TCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | CAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCACAGTTCTCGCGAGATaGAATCCTCAGGGACCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QNRVSPSRPYVQPYLSSSTVLAR*NPQGPD Trigger: ATCAGGTCCCTGAGGATTTCATCTCGCGAGAACTGT...GGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | AAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGGTCCCACTGTGAGCTaGAGAAATCCTCCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KTESHPPDHMYNHTCLAPGPTVS*RNPPCP Trigger: AGGACAAGGAGGATTTCTTCAGCTCACAGTGGGACC...TGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | GTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAACTTCTTGTGTTCAATaGACACGGGGCAGCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: VSPSRPYVQPYLSSSSGPTSCVQ*TRGSQS Trigger: TGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGT...TGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | GTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAGCTTGCTCTCCTCGTTaGATACAAAGCTGCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VSPSRPYVQPYLSSSSGPACSPR*IQSCSQ Trigger: TTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGC...TGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | GAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACCGATGCGCACCAGGTTaGGTTCCACGTCTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ETHNFIYKTESHPPDHMYRCAPG*VPRLPQ Trigger: CTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCG...GTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | AAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGCACCAGCTTCTGCTTaGTCTCCTCGTTGGATACAA | + |
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Preference number: 4 (lower is better) Translates to: KTESHPPDHMYNHTCLAPAPASA*SPRWIQ Trigger: TTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGC...TGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | AAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGGTCCCAGCGTTGGGTaGAACTCGCTGAAGAATATA | + |
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Preference number: 4 (lower is better) Translates to: KTESHPPDHMYNHTCLAPGPSVG*NSLKNI Trigger: TATATTCTTCAGCGAGTTCCACCCAACGCTGGGACC...TGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | ACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGTGATGATGTACACCTaGACCGTGTCAAACAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TESHPPDHMYNHTCLAPVVMMYT*TVSNSS Trigger: AGAACTGTTTGACACGGTCCAGGTGTACATCATCAC...CACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | TGGACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTATCAAGTGGATGGTGTTaGATTCATCAATGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: WTKEALVGASSHSNMFQLSSGWC*IHQWAE Trigger: CTCTGCCCATTGATGAATCCAACACCATCCACTTGA...TAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | TTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCGCACAAGTCTTAGCCTaGGCGTCACACACAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LFTKPSLTLQTICTTILVAQVLA*ASHTKP Trigger: GGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGC...GACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | ACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATCAATGGGCAGAGTaGAGCGGCCGGAGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: THNFIYKTESHPPDHMYNHQWAE*SGRRHS Trigger: TGAATGCCTCCGGCCGCTGCACTCTGCCCATTGATG...GTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | GAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACGGCACATCATACTCCTaGGCAACAGGAGGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ETHNFIYKTESHPPDHMYGTSYS*ATGGSG Trigger: GCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCC...GTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | AGGATGAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTGTCCTTGCTTGGTaGCGTAGGACAGACATGCCT | + |
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Preference number: 4 (lower is better) Translates to: RMKHITLFTKPSLTLQTICVLAW*RRTDMP Trigger: AGGCATGTCTGTCCTACGTCACCAAGCAAGGACACA...TATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | CTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGGCTCATGGTAGCTCATaGCTGTCTTGCAGCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LYLQNRVSPSRPYVQPYLAHGSS*LSCSRS Trigger: AGATCTGCTGCAAGACAGGCATGAGCTACCATGAGC...CAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | AGGATGAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATAGGTAAGGTCCCACTGTaGGCTGAAGAAATCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RMKHITLFTKPSLTLQTIGKVPL*AEEILL Trigger: AAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACC...TATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTCATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR GCA 90 bp | CTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGAGCTCATGCCTGTCTTaGAGCAGATCTCATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYLQNRVSPSRPYVQPYLSSCLS*SRSHHS Trigger: GCTATGATGAGATCTGCTGCAAGACAGGCATGAGCT...CAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | GAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAGGCTGCAGTATAGCTaGAACACATCTCGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETHNFIYKTESHPPDHMYRLQYS*NTSRRL Trigger: CAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCT...GTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTTGGAGTACTGGAGGATaGATACCAGTGTCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FIYKTESHPPDHMYNHTCWSTGG*IPVSQH Trigger: GTGTTGTGACACTGGTATCCATCCTCCAGTACTCCA...ACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR TCA 90 bp | GAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACTTGGGTGGAACTCGCTaGAGAATATACATTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ETHNFIYKTESHPPDHMYLGGTR*RIYIRC Trigger: GCATCGAATGTATATTCTTCAGCGAGTTCCACCCAA...GTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CCA 90 bp | CTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTTCATCAGCCCAAACTaGATCAGCTTCCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLQNRVSPSRPYVQPYLFISPN*ISFLSS Trigger: TGATGAAAGGAAGCTGATCCAGTTTGGGCTGATGAA...CAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTTCGATCACCTTCAAGTaGATGGTGTTGGATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FIYKTESHPPDHMYNHTCSITFK*MVLDSS Trigger: TGATGAATCCAACACCATCCACTTGAAGGTGATCGA...ACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 90 bp | TCCTGCGCAACAGGAGGGTCTGGCCGCTGCTCGATCACCTTCAAGTaGATGGTGTTGGATTCATCAATGGGCAGAGTGCAGCGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCATGGSGRCSITFK*MVLDSSMGRVQRPE Trigger: CTCCGGCCGCTGCACTCTGCCCATTGATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS TCA 90 bp | GAGTGCAGCGGCCGGAGGCATTCAGCTCTTCCAGCAGGATGGTCATaGTGGGCACCAGCTTCTGCTTGCTCTCCTCGTTGGATACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECSGRRHSALPAGWS*WAPASACSPRWIQS Trigger: GCTTTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCATCATGACCATCCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS TCA 90 bp | GCTTCCTTTCATCAACGTGTTGTAACTGCTGGGGGTGGCGGCCAATaGGGTCTCGCACAGTGGTACCAGGGCTCAGGCTGCAGTATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASFHQRVVTAGGGGQ*GLAQWYQGSGCSIA Trigger: AGCTATACTGCAGCCTGAGCCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS CCA 90 bp | AACTGGATCAGCTTCCTTTCATCAACGTGTTGTAACTGCTGGGGGTaGCGGCCAATGAGGTCTCGCACAGTGGTACCAGGGCTCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NWISFLSSTCCNCWG*RPMRSRTVVPGLRL Trigger: CAGCCTGAGCCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATCCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS CCA 90 bp | AGCCCAAACTGGATCAGCTTCCTTTCATCAACGTGTTGTAACTGCTaGGGGTGGCGGCCAATGAGGTCTCGCACAGTGGTACCAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPNWISFLSSTCCNC*GWRPMRSRTVVPGL Trigger: GAGCCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATCCAGTTTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS CCA 90 bp | TCTTGCAGCAGATCTCATCATAGCTGTGACAGCCCGTGTAAAGCCTaGCAGGGTGGCTCCGCTCCTCCCGAGACACTCGGACTGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: SCSRSHHSCDSPCKA*QGGSAPPETLGLDI Trigger: AATATCCAGTCCGAGTGTCTCGGGAGGAGCGGAGCCACCCTGCCAGGCTTTACACGGGCTGTCACAGCTATGATGAGATCTGCTGCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS-3UTR CAA 90 bp | CGTCTGCCTCAGCGGAGATCTTCTGGACATGGCGAAACCCGTCAATGTAGGGCACACACAAAGCCCAGGTaGAAGAGGAGAGCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPQRRSSGHGETRQCRAHTKPR*KRRALR Trigger: CCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTG...TGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
||
| CDS TCA 90 bp | CCGGCCAGCTTTTTAACGATGGGTTCCAGGGCACAAGTCTTAGCCTaGGCGTCACACACAAAGCCCAGGTTGAAGAGGAGAGCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PASFLTMGSRAQVLA*ASHTKPRLKRRALR Trigger: CCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGCCCTGGAACCCATCGTTAAAAAGCTGGCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS GCA 90 bp | AAGACGGGCACATCATACTCCTGCGCAACAGGAGGGTCTGGCCGCTaGTCGATCACCTTCAAGTGGATGGTGTTGGATTCATCAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTGTSYSCATGGSGR*SITFKWMVLDSSMG Trigger: GCCCATTGATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS GCA 90 bp | ATCAGCCCAAACTGGATCAGCTTCCTTTCATCAACGTGTTGTAACTaGTGGGGGTGGCGGCCAATGAGGTCTCGCACAGTGGTACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISPNWISFLSSTCCN*WGWRPMRSRTVVPG Trigger: CCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATCCAGTTTGGGCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 90 bp | ATGAGGTCTCGCACAGTGGTACCAGGGCTCAGGCTGCAGTATAGCTaGAACACATCTCGGAGACTGGCCCTTTTGTGTCCTTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MRSRTVVPGLRLQYS*NTSRRLALLCPCLV Trigger: CACCAAGCAAGGACACAAAAGGGCCAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTACCACTGTGCGAGACCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | CTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTGCCTCAGCGGAGATCTTTTGCGGCTGTACTTCTaGTGTTCAATGCACACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LNGDAHQVEFHVCLSGDLLRLYF*CSMHTG Trigger: CCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAA...AAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CAA 90 bp | CTGGACATGGCGAAACCCGTCAATGTAGGGCAGGATCTGCTGTGTGGTAAGGTCGGCACCAGCTTCTGCTaGCTCTCCTCGTTGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: LDMAKPVNVGQDLLCGKVGTSFC*LSSLDT Trigger: TGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCC...GACCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS GCA 90 bp | GAGACTGGCCCTTTTGTGTCCTTGCTTGGTGACGTAGGACAGACATaGCTCCTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETGPFVSLLGDVGQT*LLQGLVIHQILDFW Trigger: CCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGTCTGTCCTACGTCACCAAGCAAGGACACAAAAGGGCCAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS GCA 90 bp | AAGAAATCCTCCTTGTCCTTTGTAAAGACGGGCACATCATACTCCTaGGCAACAGGAGGGTCTGGCCGCTGCTCGATCACCTTCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKSSLSFVKTGTSYS*ATGGSGRCSITFKW Trigger: CCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 90 bp | CTTTGTAAAGACGGGCACATCATACTCCTGCGCAACAGGAGGGTCTaGCCGCTGCTCGATCACCTTCAAGTGGATGGTGTTGGATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LCKDGHIILLRNRRV*PLLDHLQVDGVGFI Trigger: GATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTCTTTACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | CTCCAGTGGACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCGGCCCTTTTGTGTCCTaGCTTGGTGACGTAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LQWTKEALVGASSHSNMFGPFVS*LGDVGQ Trigger: CTGTCCTACGTCACCAAGCAAGGACACAAAAGGGCC...GAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGTCCACTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | GTCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCACGGAGACTGGCCCTTTaGTGTCCTTGCTTGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: VSPSRPYVQPYLSSSSGPRRLAL*CPCLVT Trigger: CGTCACCAAGCAAGGACACAAAAGGGCCAGTCTCCG...TGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS TCA 90 bp | CCCGTCAATGTAGGGCAGGATCTGCTGTGTGGTAAGGTCCCACTGTaGGCTGAAGAAATCCTCCTTGTCCTTTGTAAAGACGGGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: PVNVGQDLLCGKVPL*AEEILLVLCKDGHI Trigger: GATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACCACACAGCAGATCCTGCCCTACATTGACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | GGCAGGATCTGCTGTGTGGTAAGGTCCCACTGTGAGCTGAAGAAATCCTCCTTGTTCTGTAACTCGGGCTaGGTGATGATGTACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRICCVVRSHCELKKSSLFCNSG*VMMYTW Trigger: CCAGGTGTACATCATCACCAAGCCCGAGTTACAGAA...CAAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACCACACAGCAGATCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS-3UTR CAA 90 bp | ACCATAGTACAGCAGGTTCTGAATGGCGATGCGCACCAGGTTGAGTTCCACGTCTGCTTGCTCTCCTCGTaGGATACAAAGCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TIVQQVLNGDAHQVEFHVCLLSS*DTKLLS Trigger: TGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCA...GACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTACTATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
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| CDS CCA 90 bp | GTGATGAGCTTGTTCTGTAACTCGGGCTTGGTGATGATGTACACCTaGACCGTGTCAAACAGTTCTCGCGAGATGAAATCCTCAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VMSLFCNSGLVMMYT*TVSNSSREMKSSGT Trigger: GGTCCCTGAGGATTTCATCTCGCGAGAACTGTTTGACACGGTCCAGGTGTACATCATCACCAAGCCCGAGTTACAGAACAAGCTCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CCA 90 bp | CTCCTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTTGGTGTTaGGCAATACACATTGGAGTACTGGAGGATGGATACCAGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQGLVIHQILDFWC*AIHIGVLEDGYQCH Trigger: GTGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 90 bp | ACATGCCTCCTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTTaGTGTTGGGCAATACACATTGGAGTACTGGAGGATGGATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TCLLQGLVIHQILDF*CWAIHIGVLEDGYQ Trigger: CTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | TGGACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTATTGCGGCTGTACTTCTaGTGTTCAATGCACACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WTKEALVGASSHSNMFQLLRLYF*CSMHTG Trigger: CCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAA...TAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | TCTCACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAACACACAAAGCCCAGGTaGAAGAGGAGAGCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SHPPDHMYNHTCLAPVDQHTKPR*KRRALR Trigger: CCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTG...TTGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 90 bp | GATGAAATCCTCAGGGACCTGATAGGTAATTTTGGGTCCCAGCGTTaGGTGGAACTCGCTGAAGAATATACATTCGATGCGGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DEILRDLIGNFGSQR*VELAEEYTFDAAAA Trigger: AGCAGCTGCCGCATCGAATGTATATTCTTCAGCGAGTTCCACCCAACGCTGGGACCCAAAATTACCTATCAGGTCCCTGAGGATTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS-3UTR CAA 90 bp | CACCCTCCAGACCATATGTACAACCATACTTGTCTAGCTCCAGTGGACCAAGGATGCTTGCTCTCCTCGTaGGATACAAAGCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HPPDHMYNHTCLAPVDQGCLLSS*DTKLLS Trigger: TGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCA...TCCTTGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | ACCAAGGAGGCCTTAGTAGGGGCAAGTAGCCATAGTAACATGTTCCAGCTAGCCCAGCAGATGATGATGTaGGGGTCATTTTCTAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TKEALVGASSHSNMFQLAQQMMM*GSFSSR Trigger: GCGACTAGAAAATGACCCCAACATCATCATCTGCTG...GGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | AGGATGAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATAGCGATGCGCACCAGGTaGAGTTCCACGTCTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RMKHITLFTKPSLTLQTIAMRTR*SSTSAS Trigger: TGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGC...TATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 90 bp | TGTCATCCACCAGATCCTGGACTTTTGGTGTTGGGCAATACACATTaGAGTACTGGAGGATGGATACCAGTGTCACAACACCATAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: CHPPDPGLLVLGNTH*STGGWIPVSQHHST Trigger: TGTACTATGGTGTTGTGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS-3UTR CAA 90 bp | TTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTCGGCACCAGCTTCTGCTaGCTCTCCTCGTTGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: LFTKPSLTLQTICTTILVGTSFC*LSSLDT Trigger: TGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCC...GACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS-3UTR CAA 90 bp | AGGATGAAACACATAACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATTCTGTAACTCGGGCTaGGTGATGATGTACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RMKHITLFTKPSLTLQTIFCNSG*VMMYTW Trigger: CCAGGTGTACATCATCACCAAGCCCGAGTTACAGAA...TATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTCATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTGTTGAAGAGGAGAGCATaGCGGCTGTACTTCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLQNRVSPSRPYVQPYLLKRRA*RLYFLC Trigger: ACACAAGAAGTACAGCCGCAATGCTCTCCTCTTCAA...CAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS-3UTR CAA 90 bp | AACTTTATTTACAAAACCGAGTCTCACCCTCCAGACCATATGTACAACCATACTTTCAAGTGGATGGTGTaGGATTCATCAATGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NFIYKTESHPPDHMYNHTFKWMV*DSSMGR Trigger: TCTGCCCATTGATGAATCCAACACCATCCACTTGAA...AGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS GCA 72 bp | AGGGTCTGGCCGCTGCTCGATCACCAATGGGCAGAGTaGAGCGGCCGGAGGCATTCAGCTCTTCCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVWPLLDHQWAE*SGRRHSALPAG Trigger: TCCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTCTGCCCATTGGTGATCGAGCAGCGGCCAGACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195370.6 |
||
| CDS TCA 72 bp | CATCAACGTGTTGTAACTGCTGGGGGTGGCGGCCAATaGGGTCTCGCACAGTGGTACCAGGGCTCAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HQRVVTAGGGGQ*GLAQWYQGSGC Trigger: GCAGCCTGAGCCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS TCA 72 bp | GGCCGGAGGCATTCAGCTCTTCCAGCAGGATGGTCATaGTGGGCACCAGCTTCTGCTTGCTCTCCTCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRRHSALPAGWS*WAPASACSPRW Trigger: CCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCATCATGACCATCCTGCTGGAAGAGCTGAATGCCTCCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
||
| CDS CCA 72 bp | AGATCTCATCATAGCTGTGACAGCCCGTGTAAAGCCTaGCAGGGTGGCTCCGCTCCTCCCGAGACACTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSHHSCDSPCKA*QGGSAPPETLG Trigger: TCCGAGTGTCTCGGGAGGAGCGGAGCCACCCTGCCAGGCTTTACACGGGCTGTCACAGCTATGATGAGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
||
| CDS CCA 72 bp | GACGGGCACATCATACTCCTGCGCAACAGGAGGGTCTaGCCGCTGCTCGATCACCTTCAAGTGGATGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DGHIILLRNRRV*PLLDHLQVDGV Trigger: AACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS GCA 72 bp | CCAGCTTCTGCTTGCTCTCCTCGTTGGATACAAAGCTaGTCTCAAGCTCCAGCGTGGTCAAGTAGCCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PASACSPRWIQS*SQAPAWSSSRP Trigger: TGGCCGGCTACTTGACCACGCTGGAGCTTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCAGAAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS GCA 72 bp | TCCTTGTCCTTTGTAAAGACGGGCACATCATACTCCTaGGCAACAGGAGGGTCTGGCCGCTGCTCGATCACC | + |
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Preference number: 6 (lower is better) Translates to: SLSFVKTGTSYS*ATGGSGRCSIT Trigger: GGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | CGCACAGTGGTACCAGGGCTCAGGCTGCAGTATAGCTaGAACACATCTCGGAGACTGGCCCTTTTGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RTVVPGLRLQYS*NTSRRLALLCP Trigger: AGGACACAAAAGGGCCAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTACCACTGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | AGCTTCCTTTCATCAACGTGTTGTAACTGCTGGGGGTaGCGGCCAATGAGGTCTCGCACAGTGGTACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SFLSSTCCNCWG*RPMRSRTVVPG Trigger: CCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS GCA 72 bp | TCAAGTGGATGGTGTTGGATTCATCAATGGGCAGAGTaGAGCGGCCGGAGGCATTCAGCTCTTCCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSGWCWIHQWAE*SGRRHSALPAG Trigger: TCCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTCTGCCCATTGATGAATCCAACACCATCCACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | ACAGGAGGGTCTGGCCGCTGCTCGATCACCTTCAAGTaGATGGTGTTGGATTCATCAATGGGCAGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: TGGSGRCSITFK*MVLDSSMGRVQ Trigger: CTGCACTCTGCCCATTGATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS GCA 72 bp | ACATCATACTCCTGCGCAACAGGAGGGTCTGGCCGCTaGTCGATCACCTTCAAGTGGATGGTGTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: TSYSCATGGSGR*SITFKWMVLDS Trigger: TGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS GCA 72 bp | AACTGGATCAGCTTCCTTTCATCAACGTGTTGTAACTaGTGGGGGTGGCGGCCAATGAGGTCTCGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: NWISFLSSTCCN*WGWRPMRSRTV Trigger: CACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATCCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | TGGATCAGCTTCCTTTCATCAACGTGTTGTAACTGCTaGGGGTGGCGGCCAATGAGGTCTCGCACAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: WISFLSSTCCNC*GWRPMRSRTVV Trigger: TACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 72 bp | CCCAGGTTGAAGAGGAGAGCATTGCGGCTGTACTTCTaGTGTTCAATGCACACGGGGCAGCCAATCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PRLKRRALRLYF*CSMHTGQPISF Trigger: GAAGCTGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTCAACCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CAA 72 bp | GCGTCACACACAAAGCCCAGGTTGAAGAGGAGAGCATaGCGGCTGTACTTCTTGTGTTCAATGCACACGGGG | + |
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Preference number: 6 (lower is better) Translates to: ASHTKPRLKRRA*RLYFLCSMHTG Trigger: CCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTGTGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CAA 72 bp | TCCAGCAGGATGGTCATGATGGGCACCAGCTTCTGCTaGCTCTCCTCGTTGGATACAAAGCTGCTCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRMVMMGTSFC*LSSLDTKLLSS Trigger: GCTTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCATCATGACCATCCTGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS GCA 72 bp | AGAGGAGAGCATTGCGGCTGTACTTCTTGTGTTCAATaGACACGGGGCAGCCAATCAGCTTCTTCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: RGEHCGCTSCVQ*TRGSQSASSPW Trigger: CCATGGAGAAGAAGCTGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS GCA 72 bp | TCTTCCAGCAGGATGGTCATGATGGGCACCAGCTTCTaGTTGCTCTCCTCGTTGGATACAAAGCTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSRMVMMGTSF*LLSSLDTKLLS Trigger: TGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCATCATGACCATCCTGCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CAA 90 bp | CACACAAAGCCCAGGTTGAAGAGGAGAGCATTGCGGCTGTACTTCTaGTGTTCAATGCACACGGGGCAGCCAATCAGCTTCTTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: HTKPRLKRRALRLYF*CSMHTGQPISFFSM Trigger: CATGGAGAAGAAGCTGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CAA 90 bp | TTCTCCATGGCTGTGACAGTGATGAGCTTGTTCTGTAACTCGGGCTaGGTGATGATGTACACCTGGACCGTGTCAAACAGTTCTCGCGAG | + |
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Preference number: 6 (lower is better) Translates to: FSMAVTVMSLFCNSG*VMMYTWTVSNSSRE Trigger: CTCGCGAGAACTGTTTGACACGGTCCAGGTGTACATCATCACCAAGCCCGAGTTACAGAACAAGCTCATCACTGTCACAGCCATGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CAA 90 bp | CCTCCTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTTGGTGTaGGGCAATACACATTGGAGTACTGGAGGATGGATACCAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PPAGTCHPPDPGLLV*GNTHWSTGGWIPVS Trigger: TGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 90 bp | GACATGCCTCCTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTaGGTGTTGGGCAATACACATTGGAGTACTGGAGGATGGATACCA | + |
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Preference number: 6 (lower is better) Translates to: DMPPAGTCHPPDPGL*VLGNTHWSTGGWIP Trigger: TGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | CATGCCTCCTGCAGGGACTTGTCATCCACCAGATCCTaGACTTTTGGTGTTGGGCAATACACATTGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: HASCRDLSSTRS*TFGVGQYTLEY Trigger: GTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 72 bp | CCTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTaGGTGTTGGGCAATACACATTGGAGTACTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PAGTCHPPDPGL*VLGNTHWSTGG Trigger: TCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 90 bp | ATCTGCTGTGTGGTAAGGTCCCACTGTGAGCTGAAGAAATCCTCCTaGTCCTTTGTAAAGACGGGCACATCATACTCCTGCGCAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: ICCVVRSHCELKKSS*SFVKTGTSYSCATG Trigger: TCCTGTTGCGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACCACACAGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS TCA 72 bp | TTTTTAACGATGGGTTCCAGGGCACAAGTCTTAGCCTaGGCGTCACACACAAAGCCCAGGTTGAAGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FLTMGSRAQVLA*ASHTKPRLKRR Trigger: TCTCCTCTTCAACCTGGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGCCCTGGAACCCATCGTTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CCA 72 bp | CTCAGGGACCTGATAGGTAATTTTGGGTCCCAGCGTTaGGTGGAACTCGCTGAAGAATATACATTCGATGCG | + |
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Preference number: 6 (lower is better) Translates to: LRDLIGNFGSQR*VELAEEYTFDA Trigger: CGCATCGAATGTATATTCTTCAGCGAGTTCCACCCAACGCTGGGACCCAAAATTACCTATCAGGTCCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CCA 72 bp | CTGCAGGGACTTGTCATCCACCAGATCCTGGACTTTTaGTGTTGGGCAATACACATTGGAGTACTGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LQGLVIHQILDF*CWAIHIGVLED Trigger: ATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 72 bp | GCTGTGACAGTGATGAGCTTGTTCTGTAACTCGGGCTaGGTGATGATGTACACCTGGACCGTGTCAAACAGT | + |
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Preference number: 6 (lower is better) Translates to: AVTVMSLFCNSG*VMMYTWTVSNS Trigger: ACTGTTTGACACGGTCCAGGTGTACATCATCACCAAGCCCGAGTTACAGAACAAGCTCATCACTGTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010201.9 ENSMUST00000195370.6 |
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| CDS CAA 72 bp | GTGGTAAGGTCCCACTGTGAGCTGAAGAAATCCTCCTaGTCCTTTGTAAAGACGGGCACATCATACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VVRSHCELKKSS*SFVKTGTSYSC Trigger: GCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | CCAGATCCTGGACTTTTGGTGTTGGGCAATACACATTaGAGTACTGGAGGATGGATACCAGTGTCACAACAC | + |
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Preference number: 6 (lower is better) Translates to: PDPGLLVLGNTH*STGGWIPVSQH Trigger: GTGTTGTGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | GGACTTGTCATCCACCAGATCCTGGACTTTTGGTGTTaGGCAATACACATTGGAGTACTGGAGGATGGATAC | + |
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Preference number: 6 (lower is better) Translates to: GLVIHQILDFWC*AIHIGVLEDGY Trigger: GTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 72 bp | GGGACTTGTCATCCACCAGATCCTGGACTTTTGGTGTaGGGCAATACACATTGGAGTACTGGAGGATGGATA | + |
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Preference number: 6 (lower is better) Translates to: GTCHPPDPGLLV*GNTHWSTGGWI Trigger: TATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CAA 72 bp | ACCAGATCCTGGACTTTTGGTGTTGGGCAATACACATaGGAGTACTGGAGGATGGATACCAGTGTCACAACA | + |
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Preference number: 6 (lower is better) Translates to: TRSWTFGVGQYT*EYWRMDTSVTT Trigger: TGTTGTGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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| CDS CCA 72 bp | TGTAGTCTCCGGATAAGGTTCTTCATCAGCCCAAACTaGATCAGCTTCCTTTCATCAACGTGTTGTAACTGC | + |
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Preference number: 6 (lower is better) Translates to: CSLRIRFFISPN*ISFLSSTCCNC Trigger: GCAGTTACAACACGTTGATGAAAGGAAGCTGATCCAGTTTGGGCTGATGAAGAACCTTATCCGGAGACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010201.9 |
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