Pregenerated sensors for NPR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022206Ensembl transcript IDs: ENSMUST00000066529.5, ENSMUST00000228489.2, ENSMUST00000228603.2
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCCACACAGGTGCAGCCCATTCACTTTGACTCCACTGAGAGAATaGGGTGTGGTCCACTCCTTCCCTGGGAAGCCAGCTTCCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: APHRCSPFTLTPLRE*GVVHSFPGKPASRA Trigger: AGCTCTGGAAGCTGGCTTCCCAGGGAAGGAGTGGACCACACCTCATTCTCTCAGTGGAGTCAAAGTGAATGGGCTGCACCTGTGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 90 bp | TGGGGTGGATGCAGTCTGCCCATCTGTCTTCATTATGTGAGTCCCTaGCCATCAGCTGCAGCCTTCCTGAGTTGTGCTCCACAAACGCGC | + |
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Preference number: 1 (lower is better) Translates to: WGGCSLPICLHYVSP*PSAAAFLSCAPQTR Trigger: GCGCGTTTGTGGAGCACAACTCAGGAAGGCTGCAGCTGATGGTCAGGGACTCACATAATGAAGACAGATGGGCAGACTGCATCCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR GCA 90 bp | CTCACTATGGAGACCATCCTGGCCCTAAACTCACTGATATCCTCCTaGTTCTGCCTCCCAAGTGCTGGAATTGAAGACATGGGCCACCTT | + |
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Preference number: 1 (lower is better) Translates to: LTMETILALNSLISS*FCLPSAGIEDMGHL Trigger: AAGGTGGCCCATGTCTTCAATTCCAGCACTTGGGAGGCAGAAGCAGGAGGATATCAGTGAGTTTAGGGCCAGGATGGTCTCCATAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CCA 90 bp | CAGCCCCTTGGTTTCAGCAATGCCCAGGGAAGAAGGCTCCGATTTTaGCCAATTGAGAGCACTTCCTTGCTGTCTTCTATGCTACACCAT | + |
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Preference number: 1 (lower is better) Translates to: QPLGFSNAQGRRLRF*PIESTSLLSSMLHH Trigger: ATGGTGTAGCATAGAAGACAGCAAGGAAGTGCTCTCAATTGGCCAAAATCGGAGCCTTCTTCCCTGGGCATTGCTGAAACCAAGGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CCA 90 bp | AGCTGCAAACTTCTTCTCTCTGTCACTTTGAGAGACATAAGCTCCTaGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGTGGAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: SCKLLLSVTLRDISS*FFSLGMSSTSCGDW Trigger: CCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCTTATGTCTCTCAAAGTGACAGAGAGAAGAAGTTTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 90 bp | AAGAAAGCAATGGCATCACTAGAAACAGCTTCTGAAACCACTCTCTaGGATACACAAGGCCTCCCTTTCCACGTCCCACTGCATGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: KKAMASLETASETTL*DTQGLPFHVPLHVL Trigger: TAAGACATGCAGTGGGACGTGGAAAGGGAGGCCTTGTGTATCTCAGAGAGTGGTTTCAGAAGCTGTTTCTAGTGATGCCATTGCTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 90 bp | AACATCATTGAAAATGTAAGAGAGAAACAAGCAGCCCTCTGGTTCTaGGAACTGGGGTGGATGCAGTCTGCCCATCTGTCTTCATTATGT | + |
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Preference number: 1 (lower is better) Translates to: NIIENVREKQAALWF*ELGWMQSAHLSSLC Trigger: ACATAATGAAGACAGATGGGCAGACTGCATCCACCCCAGTTCTCAGAACCAGAGGGCTGCTTGTTTCTCTCTTACATTTTCAATGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CCA 90 bp | CATAAGCTCCTGGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGTaGAGACTGGCTTTTGAAGAAGGTCTAAACTGTTCATTATTCTGT | + |
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Preference number: 1 (lower is better) Translates to: HKLLVLLSGHVQHFL*RLAFEEGLNCSLFC Trigger: ACAGAATAATGAACAGTTTAGACCTTCTTCAAAAGCCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 90 bp | TCACCACTGTGTCTTGCTGTCAAATTCTCACTGTCTGCTTATTCTTaGGGGAAAGGGGTTGTGTTTCTTTATAGACTCCACTTAAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: SPLCLAVKFSLSAYS*GKGVVFLYRLHLSL Trigger: TAGACTTAAGTGGAGTCTATAAAGAAACACAACCCCTTTCCCTCAAGAATAAGCAGACAGTGAGAATTTGACAGCAAGACACAGTGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 90 bp | CATCTGTTCTCATTCCATAGGATTCTCCCTCTCCTCCATGAATTCTaGAATGTAAACAACTATTTCAAGACATGTGGAATTCTGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: HLFSFHRILPLLHEF*NVNNYFKTCGILSV Trigger: CACAGACAGAATTCCACATGTCTTGAAATAGTTGTTTACATTTCAGAATTCATGGAGGAGAGGGAGAATCCTATGGAATGAGAACAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CCA 90 bp | GTAAAAATGAACTCGGTATCCTATTATGATTCACACTTGGGGAAATaGACCTCCTGGTCCTGTGCATATAAATTTATGCCTTTAAATATG | + |
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Preference number: 1 (lower is better) Translates to: VKMNSVSYYDSHLGK*TSWSCAYKFMPLNM Trigger: CATATTTAAAGGCATAAATTTATATGCACAGGACCAGGAGGTCCATTTCCCCAAGTGTGAATCATAATAGGATACCGAGTTCATTTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 90 bp | TTAATGAGAACATACTGTTATATTTGGGCTATGTGGTATTCTTGCTaGATAGAAACCTTTACAAGAACACGCGCACATTTCTATCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: LMRTYCYIWAMWYSC*IETFTRTRAHFYPN Trigger: GTTTGGATAGAAATGTGCGCGTGTTCTTGTAAAGGTTTCTATTCAGCAAGAATACCACATAGCCCAAATATAACAGTATGTTCTCATTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCGACATAAATCTCCTCTaGTGCCCCTCCAGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RPECGRWTQPSSTTNLSPDINLL*CPSSSQ Trigger: CTGGCTGCTGGAGGGGCATCAGAGGAGATTTATGTC...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGTTTTCTATCCTCGTGTaGACTGCCCCCAAAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: VDVGRSLHQPQTCPPVPEFSILV*TAPKAI Trigger: GATTGCTTTGGGGGCAGTTCACACGAGGATAGAAAA...CTCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTTTTCTATCCTCGTGTaGACTGCCCCCAAAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: PPVPERGALHSQPGDFFHFSILV*TAPKAI Trigger: GATTGCTTTGGGGGCAGTTCACACGAGGATAGAAAA...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTGACATAAATCTCCTCTaGTGCCCCTCCAGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: YPRVNCPQSNQDMDAADFDINLL*CPSSSQ Trigger: CTGGCTGCTGGAGGGGCATCAGAGGAGATTTATGTC...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGTATCCTCGTGTGAACTaGCCCCAAAGCAATCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: MWTLDAAFINHKPVPQFQYPRVN*PQSNQD Trigger: ATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA...CTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCTATCCTCGTGTGAACTaGCCCCAAAGCAATCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RPECGRWTQPSSTTNLSPYPRVN*PQSNQD Trigger: ATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCACTGCATTCCCAGCCTaGAGATTTCTTTCATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: RPECGRWTQPSSTTNLSPTAFPA*RFLSFH Trigger: ATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGT...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 90 bp | CAAATGATAAAGTCGGAACCAGAATTGAAACCTCTGCACCCAGGATaGAGTGCAAAGAGGATACCCAGCAAAGGCTGGCTCAGTCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: QMIKSEPELKPLHPG*SAKRIPSKGWLSLS Trigger: GCTAAGACTGAGCCAGCCTTTGCTGGGTATCCTCTTTGCACTCAATCCTGGGTGCAGAGGTTTCAATTCTGGTTCCGACTTTATCATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CAA 90 bp | ACGGTACCCTTGTTCTCTCCTCAAATGATAAAGTCGGAACCAGAATaGAAACCTCTGCACCCAGGATTGAGTGCAAAGAGGATACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVPLFSPQMIKSEPE*KPLHPGLSAKRIPS Trigger: GCTGGGTATCCTCTTTGCACTCAATCCTGGGTGCAGAGGTTTCAATTCTGGTTCCGACTTTATCATTTGAGGAGAGAACAAGGGTACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTATATTAGTTTGCCATaGGATGAGAGGCCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: FYPRVNCPQSNQDMDAADYISLP*DERPEG Trigger: GCCTTCTGGCCTCTCATCTCATGGCAAACTAATATA...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCTTCATTATATTAGTTTaGCATGAGATGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RPECGRWTQPSSTTNLSPFIILV*HEMRGQ Trigger: CTGGCCTCTCATCTCATGGCAAACTAATATAATGAA...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTTATCCTCGTGTGAACTaGCCCCAAAGCAATCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SRERGTAFPAWRFLSFHCYPRVN*PQSNQD Trigger: ATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 90 bp | CCTGCTTCTGCCTCCCAAGTGCTGGAATTGAAGACATGGGCCACCTaGTCTAGCCATGTAAAGACATTCAAGAAAGACAAACTATACAGC | + |
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Preference number: 2 (lower is better) Translates to: PASASQVLELKTWAT*SSHVKTFKKDKLYS Trigger: GCTGTATAGTTTGTCTTTCTTGAATGTCTTTACATGGCTAGACAAGGTGGCCCATGTCTTCAATTCCAGCACTTGGGAGGCAGAAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGACCATTGTCCTCTTATTaGGTGTTAAATTCTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: CGRWTQPSSTTNLSPSSRPLSSY*VLNSFQ Trigger: TTGGAAAGAATTTAACACCCAATAAGAGGACAATGG...TCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 90 bp | AAATCTCCTCTGATGCCCCTCCAGCAGCCAGAACACTTAACAGCATaGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KSPLMPLQQPEHLTA*RCFIILVCHEMRGQ Trigger: CTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGGAGGGGCATCAGAGGAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTCCTCTTATTGGGTGTATATTAGTTTGCCATaGGATGAGAGGCCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HCIPSLEISFIPLSSYWVYISLP*DERPEG Trigger: GCCTTCTGGCCTCTCATCTCATGGCAAACTAATATA...CACCCAATAAGAGGACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCCATGAACAAAATGGCTCAAAAGACACAGGCTGAGGGACTGGCCTTCGTGGAATTCTGTCTGTaGTTCAGGAAAAGACACGCC | + |
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Preference number: 2 (lower is better) Translates to: KLSMNKMAQKTQAEGLAFVEFCL*FRKRHA Trigger: GGCGTGTCTTTTCCTGAACCACAGACAGAATTCCAC...GAAGGCCAGTCCCTCAGCCTGTGTCTTTTGAGCCATTTTGTTCATGGATAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CAA 90 bp | AGACATAAGCTCCTGGTTCTTCTCTCTGGGCATGTCCAGCACTTCTaGTGGAGACTGGCTTTTGAAGAAGGTCTAAACTGTTCATTATTC | + |
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Preference number: 2 (lower is better) Translates to: RHKLLVLLSGHVQHF*WRLAFEEGLNCSLF Trigger: GAATAATGAACAGTTTAGACCTTCTTCAAAAGCCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCTTATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGATCTGAAACTCACTATGGAGACCATCCTGGCCCTAAACTCACTGATATCCCAAATTCTCACTGTCTaGTTATTCTTGAGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ADLKLTMETILALNSLISQILTV*LFLRER Trigger: CCTTTCCCTCAAGAATAAGCAGACAGTGAGAATTTG...GGATATCAGTGAGTTTAGGGCCAGGATGGTCTCCATAGTGAGTTTCAGATCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAACACCTGCACGAGTAGCTCTGTTTCAAGAAAGCAATGGCATCACTAGATATATTAGTTTGCCATaGGATGAGAGGCCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SKTPARVALFQESNGITRYISLP*DERPEG Trigger: GCCTTCTGGCCTCTCATCTCATGGCAAACTAATATA...TCTAGTGATGCCATTGCTTTCTTGAAACAGAGCTACTCGTGCAGGTGTTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CAA 90 bp | AGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATaGTCCTCTTATTGGGTGTTAAATTCTTTCCAAGAATATTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: REGHCIPSLEISFIP*SSYWVLNSFQEYSP Trigger: AGGAGAATATTCTTGGAAAGAATTTAACACCCAATAAGAGGACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 90 bp | TTAGTGGTTAATGCGATATTTGAACAACCTCCAACTCAGTGTCCTTaGGAGGAGTATTTTCATTCCATAGGCCTGCAGGAAACATCGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVVNAIFEQPPTQCP*EEYFHSIGLQETSE Trigger: TTCCGATGTTTCCTGCAGGCCTATGGAATGAAAATACTCCTCCAAAGGACACTGAGTTGGAGGTTGTTCAAATATCGCATTAACCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | AAGACGGTACCCTTGTTCTCTCCTCAAATGATAAAGTCGGAACCAGAATTGAAACTGTCTGCTTATTCTTaGGGGAAAGGGGTTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: KTVPLFSPQMIKSEPELKLSAYS*GKGVVF Trigger: AAACACAACCCCTTTCCCTCAAGAATAAGCAGACAG...TTTCAATTCTGGTTCCGACTTTATCATTTGAGGAGAGAACAAGGGTACCGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAACACCTGCACGAGTAGCTCTGTTTCAAGAAAGCAATGGCATCACTAGACCCCCTTTGAAACCTTaGTCATTGGACTTAAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SKTPARVALFQESNGITRPPLKP*SLDLRV Trigger: TACTCTTAAGTCCAATGATCAAGGTTTCAAAGGGGG...TCTAGTGATGCCATTGCTTTCTTGAAACAGAGCTACTCGTGCAGGTGTTTTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | AAATTATCCATGAACAAAATGGCTCAAAAGACACAGGCTGAGGGACTGGCCTTCATTTATTTTTACCTCTaGGAGTCAGCTCCCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: KLSMNKMAQKTQAEGLAFIYFYL*ESAPTE Trigger: TTCAGTGGGAGCTGACTCTCAGAGGTAAAAATAAAT...GAAGGCCAGTCCCTCAGCCTGTGTCTTTTGAGCCATTTTGTTCATGGATAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR GCA 90 bp | AAATTATCCATGAACAAAATGGCTCAAAAGACACAGGCTGAGGGACTGGCCTTCAAGCTGGGTTTCAGATaGTCAGAATGTTACCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KLSMNKMAQKTQAEGLAFKLGFR*SECYQE Trigger: TTCTTGGTAACATTCTGAGCATCTGAAACCCAGCTT...GAAGGCCAGTCCCTCAGCCTGTGTCTTTTGAGCCATTTTGTTCATGGATAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAAGTTTTGTTTCTGAGTTCAGCTTCTCTCCCAGATCTAAGACAATAATATTTTCTATCCTCGTGTaGACTGCCCCCAAAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: PESFVSEFSFSPRSKTIIFSILV*TAPKAI Trigger: GATTGCTTTGGGGGCAGTTCACACGAGGATAGAAAA...TATTATTGTCTTAGATCTGGGAGAGAAGCTGAACTCAGAAACAAAACTTTCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAACACCTGCACGAGTAGCTCTGTTTCAAGAAAGCAATGGCATCACTAGACCATTGTCCTCTTATTaGGTGTTAAATTCTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SKTPARVALFQESNGITRPLSSY*VLNSFQ Trigger: TTGGAAAGAATTTAACACCCAATAAGAGGACAATGG...TCTAGTGATGCCATTGCTTTCTTGAAACAGAGCTACTCGTGCAGGTGTTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CAA 90 bp | ACGTTTAATGAGAACATACTGTTATATTTGGGCTATGTGGTATTCTaGCTGAATAGAAACCTTTACAAGAACACGCGCACATTTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: TFNENILLYLGYVVF*LNRNLYKNTRTFLS Trigger: GGATAGAAATGTGCGCGTGTTCTTGTAAAGGTTTCTATTCAGCAAGAATACCACATAGCCCAAATATAACAGTATGTTCTCATTAAACGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTCATTATTCTGTTCTAAAGACCAACTGAAAAATAGACAGATCCCTCCAGTGTTCATTATATTAGTTTaGCATGAGATGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: CSLFCSKDQLKNRQIPPVFIILV*HEMRGQ Trigger: CTGGCCTCTCATCTCATGGCAAACTAATATAATGAA...CACTGGAGGGATCTGTCTATTTTTCAGTTGGTCTTTAGAACAGAATAATGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR TCA 72 bp | AGGTGCAGCCCATTCACTTTGACTCCACTGAGAGAATaGGGTGTGGTCCACTCCTTCCCTGGGAAGCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: RCSPFTLTPLRE*GVVHSFPGKPA Trigger: AGCTGGCTTCCCAGGGAAGGAGTGGACCACACCTCATTCTCTCAGTGGAGTCAAAGTGAATGGGCTGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR GCA 72 bp | TTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGCGCGCGCACTTGTGACGCATCTAAAACACCTG | + |
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Preference number: 3 (lower is better) Translates to: FVCVCVCVCVCV*ARALVTHLKHL Trigger: CAGGTGTTTTAGATGCGTCACAAGTGCGCGCGCGCACACACACACACACACACACACACACACACACACGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| 3UTR CCA 72 bp | CCAGGATTGAGTGCAAAGAGGATACCCAGCAAAGGCTaGCTCAGTCTTAGCCACGATGCCCTTGTCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGLSAKRIPSKG*LSLSHDALVCP Trigger: AGGACAGACAAGGGCATCGTGGCTAAGACTGAGCCAGCCTTTGCTGGGTATCCTCTTTGCACTCAATCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR CCA 72 bp | CTGGGAAGCCAGCTTCCAGAGCTTGCTAAGCTTGCTTaGACTCCTCCACAGTTAACCTGGATGGATAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LGSQLPELAKLA*TPPQLTWMDRT Trigger: GGTCCTATCCATCCAGGTTAACTGTGGAGGAGTCCAAGCAAGCTTAGCAAGCTCTGGAAGCTGGCTTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | TGCAGTCTGCCCATCTGTCTTCATTATGTGAGTCCCTaGCCATCAGCTGCAGCCTTCCTGAGTTGTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSLPICLHYVSP*PSAAAFLSCAP Trigger: TGGAGCACAACTCAGGAAGGCTGCAGCTGATGGTCAGGGACTCACATAATGAAGACAGATGGGCAGACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCAAGCCCTTTCTGCTCCGTaGATGTCTGTCCTTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: PRVNCPQSNQDMDAADFQALSAP*MSVLPS Trigger: AGATGGAAGGACAGACATCAACGGAGCAGAAAGGGC...TTGAAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAAATCTCCTCTGATGCCCCTCCAGCAGCCAGAACACTTAACAGCATTGCGTGCCCTTTCTGCTCCGTaGATGTCTGTCCTTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HKSPLMPLQQPEHLTALRALSAP*MSVLPS Trigger: AGATGGAAGGACAGACATCAACGGAGCAGAAAGGGC...ACGCAATGCTGTTAAGTGTTCTGGCTGCTGGAGGGGCATCAGAGGAGATTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR GCA 72 bp | GAGACCATCCTGGCCCTAAACTCACTGATATCCTCCTaGTTCTGCCTCCCAAGTGCTGGAATTGAAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: ETILALNSLISS*FCLPSAGIEDM Trigger: CATGTCTTCAATTCCAGCACTTGGGAGGCAGAAGCAGGAGGATATCAGTGAGTTTAGGGCCAGGATGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR-3UTR CAA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTGCCCTTTCTGCTCCGTaGATGTCTGTCCTTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: YPRVNCPQSNQDMDAADFALSAP*MSVLPS Trigger: AGATGGAAGGACAGACATCAACGGAGCAGAAAGGGC...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGATCTGAAACTCACTATGGAGACCATCCTGGCCCTAAACTCACTGATATCCTCCCAAGTGCTGGAATaGAAGACATGGGCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ADLKLTMETILALNSLISSQVLE*KTWATL Trigger: CAAGGTGGCCCATGTCTTCAATTCCAGCACTTGGGA...GGATATCAGTGAGTTTAGGGCCAGGATGGTCTCCATAGTGAGTTTCAGATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | GAAAATGTAAGAGAGAAACAAGCAGCCCTCTGGTTCTaGGAACTGGGGTGGATGCAGTCTGCCCATCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ENVREKQAALWF*ELGWMQSAHLS Trigger: AGACAGATGGGCAGACTGCATCCACCCCAGTTCTCAGAACCAGAGGGCTGCTTGTTTCTCTCTTACATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | ATGGCATCACTAGAAACAGCTTCTGAAACCACTCTCTaGGATACACAAGGCCTCCCTTTCCACGTCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: MASLETASETTL*DTQGLPFHVPL Trigger: CAGTGGGACGTGGAAAGGGAGGCCTTGTGTATCTCAGAGAGTGGTTTCAGAAGCTGTTTCTAGTGATGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR CCA 72 bp | GGTTTCAGCAATGCCCAGGGAAGAAGGCTCCGATTTTaGCCAATTGAGAGCACTTCCTTGCTGTCTTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: GFSNAQGRRLRF*PIESTSLLSSM Trigger: CATAGAAGACAGCAAGGAAGTGCTCTCAATTGGCCAAAATCGGAGCCTTCTTCCCTGGGCATTGCTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAAACACCTGCACGAGTAGCTCTGTTTCAAGAAAGCAATGGCATCACTAGATGCAGCCTTCCTGAGTaGTGCTCCACAAACGCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SKTPARVALFQESNGITRCSLPE*CSTNAP Trigger: AGGCGCGTTTGTGGAGCACAACTCAGGAAGGCTGCA...TCTAGTGATGCCATTGCTTTCTTGAAACAGAGCTACTCGTGCAGGTGTTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | CCTCCCTTTCCACGTCCCACTGCATGTCTTAGACCCTaGCAATCAGTCCCAACTAGAAGAAAAGAGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPFPRPTACLRP*QSVPTRRKEVS Trigger: ACTTACCTCTTTTCTTCTAGTTGGGACTGATTGTCAGGGTCTAAGACATGCAGTGGGACGTGGAAAGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTCCTCTTATaGGGTGTTAAATTCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PPVPERGALHSQPGDFFHSIVLL*GVKFFP Trigger: TGGAAAGAATTTAACACCCAATAAGAGGACAATGGA...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR CCA 72 bp | CTGGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGTaGAGACTGGCTTTTGAAGAAGGTCTAAACTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVLLSGHVQHFL*RLAFEEGLNCS Trigger: TGAACAGTTTAGACCTTCTTCAAAAGCCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR CCA 72 bp | CTTCTTCTCTCTGTCACTTTGAGAGACATAAGCTCCTaGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLSVTLRDISS*FFSLGMSSTSC Trigger: ACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCTTATGTCTCTCAAAGTGACAGAGAGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | GAGCAAAGGCACAGGATGCCTGTAAGCAAGGGGAAGTaGCTTGGCATTCCAAAGCTTTTCATTCAAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EQRHRMPVSKGK*LGIPKLFIQEK Trigger: TTTCTCTTGAATGAAAAGCTTTGGAATGCCAAGTCACTTCCCCTTGCTTACAGGCATCCTGTGCCTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR GCA 72 bp | TTTGGCCAATTGAGAGCACTTCCTTGCTGTCTTCTATaGTACACCATATTGAACACGTTCAGACACAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FGQLRALPCCLL*YTILNTFRHRH Trigger: GTGCCTGTGTCTGAACGTGTTCAATATGGTGTAGCATAGAAGACAGCAAGGAAGTGCTCTCAATTGGCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTCCATTGTCCTCTTATaGGGTGTTAAATTCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTSIVLL*GVKFFP Trigger: TGGAAAGAATTTAACACCCAATAAGAGGACAATGGA...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR TCA 72 bp | TTTCAAGAAAGCAATGGCATCACTAGAAACAGCTTCTaGAACCACTCTCTGAGATACACAAGGCCTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FQESNGITRNSF*NHSLRYTRPPF Trigger: AAAGGGAGGCCTTGTGTATCTCAGAGAGTGGTTTCAGAAGCTGTTTCTAGTGATGCCATTGCTTTCTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | TGTCTTGCTGTCAAATTCTCACTGTCTGCTTATTCTTaGGGGAAAGGGGTTGTGTTTCTTTATAGACTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CLAVKFSLSAYS*GKGVVFLYRLH Trigger: GTGGAGTCTATAAAGAAACACAACCCCTTTCCCTCAAGAATAAGCAGACAGTGAGAATTTGACAGCAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR CCA 72 bp | CTTGCTAAGCTTGCTTGGACTCCTCCACAGTTAACCTaGATGGATAGGACCTCCAAGAAATTATTTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LAKLAWTPPQLT*MDRTSKKLFNF Trigger: GAAATTAAATAATTTCTTGGAGGTCCTATCCATCCAGGTTAACTGTGGAGGAGTCCAAGCAAGCTTAGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR CCA 72 bp | AACTCGGTATCCTATTATGATTCACACTTGGGGAAATaGACCTCCTGGTCCTGTGCATATAAATTTATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSVSYYDSHLGK*TSWSCAYKFMP Trigger: AGGCATAAATTTATATGCACAGGACCAGGAGGTCCATTTCCCCAAGTGTGAATCATAATAGGATACCGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCATTATTCTGTTCTAAAGACCAACTGAAAAATAGACAGATCCCTCCAGTGAGGGATCTGAGCTCTTaGTGTCTCAACAAACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSLFCSKDQLKNRQIPPVRDLSS*CLNKHR Trigger: TCTGTGTTTGTTGAGACACAAAGAGCTCAGATCCCT...CACTGGAGGGATCTGTCTATTTTTCAGTTGGTCTTTAGAACAGAATAATGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | ATTCTAGAAAGTAAAAATGAACTCGGTATCCTATTATaGTTCACACTTGGGGAAATGGACCTCCTGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILESKNELGILL*FTLGEMDLLVL Trigger: CAGGACCAGGAGGTCCATTTCCCCAAGTGTGAATCATAATAGGATACCGAGTTCATTTTTACTTTCTAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR GCA 72 bp | CACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTaGCATGAGATGAGAGGCCAGAAGGCAGATAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HLTALRCFIILV*HEMRGQKADSD Trigger: ATCACTATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCATTATTCTGTTCTAAAGACCAACTGAAAAATAGACAGATCCCTCCAGTGCAAAGGTTTCCCAACTaGGTGGTGTTTTTAAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: CSLFCSKDQLKNRQIPPVQRFPN*VVFLKL Trigger: AAGTTTTAAAAACACCACCAAGTTGGGAAACCTTTG...CACTGGAGGGATCTGTCTATTTTTCAGTTGGTCTTTAGAACAGAATAATGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | TCATTCCATAGGATTCTCCCTCTCCTCCATGAATTCTaGAATGTAAACAACTATTTCAAGACATGTGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: SFHRILPLLHEF*NVNNYFKTCGI Trigger: AATTCCACATGTCTTGAAATAGTTGTTTACATTTCAGAATTCATGGAGGAGAGGGAGAATCCTATGGAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR TCA 72 bp | GTCTACTTGGTTCAAATCTCTCCACTAGGAATCGTATaGTACCTGATAGACCAAAGAGTTTTTGTAACATAT | + |
|
Preference number: 3 (lower is better) Translates to: VYLVQISPLGIV*YLIDQRVFVTY Trigger: ATATGTTACAAAAACTCTTTGGTCTATCAGGTATCATACGATTCCTAGTGGAGAGATTTGAACCAAGTAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTGGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGTGGAGACTGGCTTCAGGCGCCACGCGCGTaGGGTGCGAGTATTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWFFSLGMSSTSCGDWLQAPRA*GASIPC Trigger: ACACGGAATACTCGCACCTCACGCGCGTGGCGCCTG...AAGCCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR GCA 90 bp | GTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGGCCACGCGCGTGAGGTaGGAGTATTCCGTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VDVGRSLHQPQTCPPVPEATRVR*EYSVSL Trigger: CAAGGACACGGAATACTCGCACCTCACGCGCGTGGC...CTCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGACGCACGCCGAGAAAGTaGACAGCAGCAAGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRWTQPSSTTNLSPSSRRTPRK*TAARTA Trigger: TGCGGTCCTTGCTGCTGTTCACTTTCTCGGCGTGCG...TCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGCACCTCGATCTTTTaGGCCGCCAGCGCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MWTLDAAFINHKPVPQFQSTSIF*AASASL Trigger: GAGAGAGGCGCTGGCGGCTCAAAAGATCGAGGTGCT...CTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACATCGGCAGGTCCCAGTaGGACGCCAGCCGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADIGRSQ*DASRAT Trigger: GGTGGCTCGGCTGGCGTCTCACTGGGACCTGCCGAT...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCGGCGGCCAGCGCTCCTaGGGACAGCATCGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTGGQRS*GQHRQV Trigger: GACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCC...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | GTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGAGTCTCCACTGGTCATaGCGTGTCTGTGCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDVGRSLHQPQTCPPVPESLHWS*RVCAPP Trigger: TGGCGGTGCACAGACACGGCATGACCAGTGGAGACT...CTCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCCCCCGTTGGCATCTATaGACACCTGCCCGGCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RPECGRWTQPSSTTNLSPPRWHL*TPARRY Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGG...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 58% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGCATACCGGTCCCCGTTaGCATCTATGGACACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VDVGRSLHQPQTCPPVPEHTGPR*HLWTPA Trigger: GGCAGGTGTCCATAGATGCCAACGGGGACCGGTATG...CTCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR CAA 72 bp | GGGACTGGCCTTCTGCCATGCTTAGCTCACAGCCCCTaGGTTTCAGCAATGCCCAGGGAAGAAGGCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTGLLPCLAHSP*VSAMPREEGSD Trigger: ATCGGAGCCTTCTTCCCTGGGCATTGCTGAAACCAAGGGGCTGTGAGCTAAGCATGGCAGAAGGCCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTATCGGCAGGTCCCAGTaGGACGCCAGCCGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YPRVNCPQSNQDMDAADFIGRSQ*DASRAT Trigger: GGTGGCTCGGCTGGCGTCTCACTGGGACCTGCCGAT...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | GTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGGGACCCCCTCGAGGGTaGAATAACAGTTCCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VDVGRSLHQPQTCPPVPEGPPRG*NNSSSR Trigger: TCGAGAGGAACTGTTATTTCACCCTCGAGGGGGTCC...CTCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAAGTCTCCACTGGTCATaGCGTGTCTGTGCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRWTQPSSTTNLSPSSRSLHWS*RVCAPP Trigger: TGGCGGTGCACAGACACGGCATGACCAGTGGAGACT...TCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGAGCTTGCTAAGCTTGCTTGGACTCCTCCACAGTTAACCTGGATGGATCTGGAAGCGAGTGCCTaGCGGCAGCAGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPELAKLAWTPPQLTWMDLEASA*RQQLPP Trigger: GGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAG...ATCCATCCAGGTTAACTGTGGAGGAGTCCAAGCAAGCTTAGCAAGCTCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR CCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACCTGGAAGCGAGTGCCTaGCGGCAGCAGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADLEASA*RQQLPP Trigger: GGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAG...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCCCACCTGGAAGCGAGTaGCTGGCGGCAGCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTPPGSE*LAAAAS Trigger: GGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGTGG...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | CATAAATCTCCTCTGATGCCCCTCCAGCAGCCAGAACACTTAACAGCATTGCGTGCACGGCTCCAGTGGTaGTGGCGAAACAGAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKSPLMPLQQPEHLTALRARLQW*WRNRAS Trigger: GCTCGCTCTGTTTCGCCACCACCACTGGAGCCGTGC...ACGCAATGCTGTTAAGTGTTCTGGCTGCTGGAGGGGCATCAGAGGAGATTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTGCACGGCTCCAGTGGTaGTGGCGAAACAGAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCARLQW*WRNRAS Trigger: GCTCGCTCTGTTTCGCCACCACCACTGGAGCCGTGC...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACCGCACGCCGAGAAAGTaGACAGCAGCAAGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADRTPRK*TAARTA Trigger: TGCGGTCCTTGCTGCTGTTCACTTTCTCGGCGTGCG...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | CATAAATCTCCTCTGATGCCCCTCCAGCAGCCAGAACACTTAACAGCATTGCGTTGCAACCCCTCCTCCTaGAAAACCTCGTGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKSPLMPLQQPEHLTALRCNPSS*KTSWTP Trigger: GGGGGTCCACGAGGTTTTTCAGGAGGAGGGGTTGCA...ACGCAATGCTGTTAAGTGTTCTGGCTGCTGGAGGGGCATCAGAGGAGATTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCTCTCGCAGCTCTCGATaGTTCCCGATGTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPECGRWTQPSSTTNLSPSRSSR*FPMLLS Trigger: GGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGA...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTCCGTGTCCTTGTGCTaGAAACCGGCGGCCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTSVSLC*KPAASA Trigger: AGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGA...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | CCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCAACGGCTCCAGTGGTGGTaGCGAAACAGAGCGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRVNCPQSNQDMDAADFQRLQWW*RNRASI Trigger: GATGCTCGCTCTGTTTCGCCACCACCACTGGAGCCG...TTGAAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | TGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAAAGCGTAGTCTCCACTaGTCATGCCGTGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRWTQPSSTTNLSPSSRKRSLH*SCRVCA Trigger: TGCACAGACACGGCATGACCAGTGGAGACTACGCTT...TCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 72 bp | TGTGAGTCCCTGACCATCAGCTGCAGCCTTCCTGAGTaGTGCTCCACAAACGCGCCTCCTGGATTAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CESLTISCSLPE*CSTNAPPGLAF Trigger: AAATGCTAATCCAGGAGGCGCGTTTGTGGAGCACAACTCAGGAAGGCTGCAGCTGATGGTCAGGGACTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCAACACGGGCCCCAGGATaGGATCCGGCTTGGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPTRAPG*DPAWRR Trigger: GCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGT...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | GCTGATCTGAAACTCACTATGGAGACCATCCTGGCCCTAAACTCACTGATATCCTGCAACCCCTCCTCCTaGAAAACCTCGTGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLKLTMETILALNSLISCNPSS*KTSWTP Trigger: GGGGGTCCACGAGGTTTTTCAGGAGGAGGGGTTGCA...GGATATCAGTGAGTTTAGGGCCAGGATGGTCTCCATAGTGAGTTTCAGATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | CCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCAACGGTCCTCAGTAGGGTaGCTGTTTGGAGGGACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVNCPQSNQDMDAADFQRSSVG*LFGGTS Trigger: ACTCGTCCCTCCAAACAGTCACCCTACTGAGGACCG...TTGAAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | AAGACGGTACCCTTGTTCTCTCCTCAAATGATAAAGTCGGAACCAGAATTGAAAGGCGGCCAGCGCTCCTaGGGACAGCATCGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTVPLFSPQMIKSEPELKGGQRS*GQHRQV Trigger: GACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCC...TTTCAATTCTGGTTCCGACTTTATCATTTGAGGAGAGAACAAGGGTACCGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR GCA 90 bp | ATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MWTLDAAFINHKPVPQFQASMDT*PAIPSN Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...CTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATGAACGTAGAGGAGGATaGCGTCATGGAACCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHERRGG*RHGTLQ Trigger: TTGAAGGGTTCCATGACGCCATCCTCCTCTACGTTC...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | GCTGATCTGAAACTCACTATGGAGACCATCCTGGCCCTAAACTCACTGATATCCCCCCGTTGGCATCTATaGACACCTGCCCGGCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ADLKLTMETILALNSLISPRWHL*TPARRY Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGG...GGATATCAGTGAGTTTAGGGCCAGGATGGTCTCCATAGTGAGTTTCAGATCAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR CCA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCCCCGTTGGCATCTATaGACACCTGCCCGGCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: YPRVNCPQSNQDMDAADFPRWHL*TPARRY Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGG...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTGCAAGGAGAGCTGTTaGTATGCTCCACGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHCKESC*YAPRFW Trigger: CCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCA...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR TCA 90 bp | TGCTCCGTTGATGTCTGTCCTTCCATCTATCTCTTTAAGGAATCTCAAGTAGACCAGGCGCCACGCGCGTaGGGTGCGAGTATTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVDVCPSIYLFKESQVDQAPRA*GASIPC Trigger: ACACGGAATACTCGCACCTCACGCGCGTGGCGCCTG...GTCTACTTGAGATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR TCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATGGCCCCAAGGATATTTaGCATTCGATCGCATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHGPKDI*HSIAFG Trigger: TCCAAATGCGATCGAATGTCAAATATCCTTGGGGCC...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR TCA 90 bp | TGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGGCCCCAAGGATATTTaGCATTCGATCGCATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGRWTQPSSTTNLSPSSRGPKDI*HSIAFG Trigger: TCCAAATGCGATCGAATGTCAAATATCCTTGGGGCC...TCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | TGCTCCGTTGATGTCTGTCCTTCCATCTATCTCTTTAAGGAATCTCAAGTAGACCCACCTGGAAGCGAGTaGCTGGCGGCAGCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSVDVCPSIYLFKESQVDPPGSE*LAAAAS Trigger: GGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGTGG...GTCTACTTGAGATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATGGCCACCTGATGATTTaGAAGGAGAGCTGTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHGHLMI*KESCWY Trigger: ATACCAACAGCTCTCCTTGCAAATCATCAGGTGGCC...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS-3UTR CCA 90 bp | ACTGTGTCTTGCTGTCAAATTCTCACTGTCTGCTTATTCTTGAGGGAAAGGGGTTCCGTGTCCTTGTGCTaGAAACCGGCGGCCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSCCQILTVCLFLRERGSVSLC*KPAASA Trigger: AGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGA...ACCCCTTTCCCTCAAGAATAAGCAGACAGTGAGAATTTGACAGCAAGACACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATCCAGGTCCAAGTCTTTaGTCTCGTCGAAATTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHPGPSL*SRRNCR Trigger: CCTACAATTTCGACGAGACCAAAGACTTGGACCTGG...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATAGTAGGGTGACTGTTTaGAGGGACGAGTATGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHSRVTV*RDEYAC Trigger: ACAAGCATACTCGTCCCTCCAAACAGTCACCCTACT...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCATACCGGTCCCCGTTaGCATCTATGGACACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPRVNCPQSNQDMDAADFHTGPR*HLWTPA Trigger: GGCAGGTGTCCATAGATGCCAACGGGGACCGGTATG...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR TCA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCGGACCCCCTCGAGGGTaGAATAACAGTTCCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTGPPRG*NNSSSR Trigger: TCGAGAGGAACTGTTATTTCACCCTCGAGGGGGTCC...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | TGCTCCGTTGATGTCTGTCCTTCCATCTATCTCTTTAAGGAATCTCAAGTAGACGCTGTAGACCAGGGCTaGACGGCTCCAGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVDVCPSIYLFKESQVDAVDQG*TAPVVV Trigger: CACCACCACTGGAGCCGTGCAGCCCTGGTCTACAGC...GTCTACTTGAGATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTTGGAGGGACGAGTATaGTTGTTTAGCTTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPVPERGALHSQPGDFFHLEGRV*LFSFRV Trigger: GACTCTGAAGCTAAACAAGCATACTCGTCCCTCCAA...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCGATGCTTCCCGATGTTaGTTTCCTCTTGCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPECGRWTQPSSTTNLSPDASRC*FPLADF Trigger: GAAATCAGCAAGAGGAAAGCAACATCGGGAAGCATC...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | ATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGGATGCTTCCCGATGTTaGTTTCCTCTTGCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: MWTLDAAFINHKPVPQFQDASRC*FPLADF Trigger: GAAATCAGCAAGAGGAAAGCAACATCGGGAAGCATC...CTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACAAGCGTAGTCTCCACTaGTCATGCCGTGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADKRSLH*SCRVCA Trigger: TGCACAGACACGGCATGACCAGTGGAGACTACGCTT...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCTGGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGTGGAGACTGGCTTAGTAGGGTGACTGTTTaGAGGGACGAGTATGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWFFSLGMSSTSCGDWLSRVTV*RDEYAC Trigger: ACAAGCATACTCGTCCCTCCAAACAGTCACCCTACT...AAGCCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS-3UTR GCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCAGCTGTAGACCAGGGCTaGACGGCTCCAGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPAVDQG*TAPVVV Trigger: CACCACCACTGGAGCCGTGCAGCCCTGGTCTACAGC...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR GCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCASMDT*PAIPSN Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTTCTCGCAGCTCTCGATaGTTCCCGATGTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPRVNCPQSNQDMDAADFSRSSR*FPMLLS Trigger: GGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGA...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACCTTCAGTGTCAGTCATaGCAACCACAGAGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADLQCQS*QPQRSP Trigger: GGGACTTCTCTGTGGTTGCCATGACTGACACTGAAG...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTGCAAGGAGAGCTGTTaGTATGCTCCACGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADCKESC*YAPRFW Trigger: CCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCA...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TTGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGCACCTCGATCTTTTaGGCCGCCAGCGCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRCFIILVCHEMRGQKADSTSIF*AASASL Trigger: GAGAGAGGCGCTGGCGGCTCAAAAGATCGAGGTGCT...ATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTCGTAATCCTCCTCATTaGGCCCTTGTTTCTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCRNPPH*ALVSQQ Trigger: CTGTTGAGAAACAAGGGCTCAATGAGGAGGATTACG...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTCCAGGTCCAAGTCTTTaGTCTCGTCGAAATTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCPGPSL*SRRNCR Trigger: CCTACAATTTCGACGAGACCAAAGACTTGGACCTGG...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGAGAACTTTTCACCTCCATaGAAAACTTCTCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VDVGRSLHQPQTCPPVPENFSPP*KTSQTQ Trigger: CTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTT...CTCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCACGGTCCTCAGTAGGGTaGCTGTTTGGAGGGACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPRSSVG*LFGGTS Trigger: ACTCGTCCCTCCAAACAGTCACCCTACTGAGGACCG...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCCGTAATCCTCCTCATTaGGCCCTTGTTTCTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTRNPPH*ALVSQQ Trigger: CTGTTGAGAAACAAGGGCTCAATGAGGAGGATTACG...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTGGCCCCAAGGATATTTaGCATTCGATCGCATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPRVNCPQSNQDMDAADFGPKDI*HSIAFG Trigger: TCCAAATGCGATCGAATGTCAAATATCCTTGGGGCC...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTAGCCACCGAAAAATGTaGTCTGATGGAATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCSHRKM*SDGIFS Trigger: CGAGAAGATTCCATCAGATCACATTTTTCGGTGGCT...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | AAGACGGTACCCTTGTTCTCTCCTCAAATGATAAAGTCGGAACCAGAATTGAAATATTCCGTGTCCTTGTaGTGGAAACCGGCGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTVPLFSPQMIKSEPELKYSVSL*WKPAAS Trigger: GCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATA...TTTCAATTCTGGTTCCGACTTTATCATTTGAGGAGAGAACAAGGGTACCGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTGATGCCCCTCCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTTTGGAGGGACGAGTATaGTTGTTTAGCTTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPLQQPEHLTALRCFILEGRV*LFSFRV Trigger: GACTCTGAAGCTAAACAAGCATACTCGTCCCTCCAA...AATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGGAGGGGCATCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACGATGCTTCCCGATGTTaGTTTCCTCTTGCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FYPRVNCPQSNQDMDAADDASRC*FPLADF Trigger: GAAATCAGCAAGAGGAAAGCAACATCGGGAAGCATC...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTCTAGGCCACATGATTTaGAAGGAGAGCTGTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCLGHMI*KESCWY Trigger: ATACCAACAGCTCTCCTTGCAAATCATGTGGCCTAG...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAACTTTTCACCTCCATaGAAAACTTCTCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPECGRWTQPSSTTNLSPNFSPP*KTSQTQ Trigger: CTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTT...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCACATACCGGTCCCCGTTaGCATCTATGGACACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPHTGPR*HLWTPA Trigger: GGCAGGTGTCCATAGATGCCAACGGGGACCGGTATG...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTCCTCTTATTGGGTGAGGAGGATGGCGTCATaGAACCCTTCAACAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: HCIPSLEISFIPLSSYWVRRMAS*NPSTNM Trigger: CATGTTTGTTGAAGGGTTCCATGACGCCATCCTCCT...CACCCAATAAGAGGACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTTATGCTCCACGATTCTaGTCTCATCTAGTCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRERGTAFPAWRFLSFHCYAPRF*SHLVSV Trigger: AACTGAGACTAGATGAGACCAGAATCGTGGAGCATA...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCATTATTCTGTTCTAAAGACCAACTGAAAAATAGACAGATCCCTCCAGTGCGGTCCTCAGTAGGGTaGCTGTTTGGAGGGACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFCSKDQLKNRQIPPVRSSVG*LFGGTS Trigger: ACTCGTCCCTCCAAACAGTCACCCTACTGAGGACCG...CACTGGAGGGATCTGTCTATTTTTCAGTTGGTCTTTAGAACAGAATAATGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAGTTTTGTTTCTGAGTTCAGCTTCTCTCCCAGATCTAAGACAATAATAAGTCTCCACTGGTCATaGCGTGTCTGTGCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PESFVSEFSFSPRSKTIISLHWS*RVCAPP Trigger: TGGCGGTGCACAGACACGGCATGACCAGTGGAGACT...TATTATTGTCTTAGATCTGGGAGAGAAGCTGAACTCAGAAACAAAACTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCATCTCGCAGCTCTCGATaGTTCCCGATGTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPSRSSR*FPMLLS Trigger: GGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGA...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR CAA 72 bp | AGAGAAAACGAGAACCGTTCCTCCCTCTCCACAGATTaGTCACACACCTCCTCCGTGCTCTTAAAATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RENENRSSLSTD*SHTSSVLLKYK Trigger: CTTATATTTTAAGAGCACGGAGGAGGTGTGTGACAAATCTGTGGAGAGGGAGGAACGGTTCTCGTTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | TGCTCCGTTGATGTCTGTCCTTCCATCTATCTCTTTAAGGAATCTCAAGTAGACCGTAATCCTCCTCATTaGGCCCTTGTTTCTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVDVCPSIYLFKESQVDRNPPH*ALVSQQ Trigger: CTGTTGAGAAACAAGGGCTCAATGAGGAGGATTACG...GTCTACTTGAGATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCAGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPASMDT*PAIPSN Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGTGATAAGCGTAGTCTCCACTaGTCATGCCGTGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFIILVCHEMRGQKADSDKRSLH*SCRVCA Trigger: TGCACAGACACGGCATGACCAGTGGAGACTACGCTT...ATCACTATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCGTTGATGTCTGTCCTTCCATCTATCTCTTTAAGGAATCTCAAGTAGACAGGAGGATGGCGTCATaGAACCCTTCAACAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: CSVDVCPSIYLFKESQVDRRMAS*NPSTNM Trigger: CATGTTTGTTGAAGGGTTCCATGACGCCATCCTCCT...GTCTACTTGAGATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | TTGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATCTTCAGTGTCAGTCATaGCAACCACAGAGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRCFIILVCHEMRGQKADLQCQS*QPQRSP Trigger: GGGACTTCTCTGTGGTTGCCATGACTGACACTGAAG...ATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 72 bp | AAGAATGACTTCTCCGAGAACGCCCTTTCTGCTCCGTaGATGTCTGTCCTTCCATCTATCTCTTTAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNDFSENALSAP*MSVLPSISLRN Trigger: ATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCAGAAAGGGCGTTCTCGGAGAAGTCATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 72 bp | CTGATGCCCCTCCAGCAGCCAGAACACTTAACAGCATaGCGTTGTTTCATTATATTAGTTTGCCATGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LMPLQQPEHLTA*RCFIILVCHEM Trigger: CATCTCATGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGGAGGGGCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 72 bp | TTGTTCTCTCCTCAAATGATAAAGTCGGAACCAGAATaGAAACCTCTGCACCCAGGATTGAGTGCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSPQMIKSEPE*KPLHPGLSAKR Trigger: CCTCTTTGCACTCAATCCTGGGTGCAGAGGTTTCAATTCTGGTTCCGACTTTATCATTTGAGGAGAGAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS-3UTR CCA 90 bp | TGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGTGATGAACGTAGAGGAGGATaGCGTCATGGAACCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFIILVCHEMRGQKADSDERRGG*RHGTLQ Trigger: TTGAAGGGTTCCATGACGCCATCCTCCTCTACGTTC...ATCACTATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| 3UTR CAA 72 bp | CATGTTGACGGATTCCGTGTGAAACCTCTGTTTGTGTaGGGAACAGATATGACTCTACCCAGAAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVDGFRVKPLFV*GTDMTLPRKFC Trigger: ACAAAACTTTCTGGGTAGAGTCATATCTGTTCCCAACACAAACAGAGGTTTCACACGGAATCCGTCAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | AAGACGGTACCCTTGTTCTCTCCTCAAATGATAAAGTCGGAACCAGAATTGAAACCGAAAAATGTGATCTaGTGGAATCTTCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTVPLFSPQMIKSEPELKPKNVI*WNLLAA Trigger: AGCTGCGAGAAGATTCCATCAGATCACATTTTTCGG...TTTCAATTCTGGTTCCGACTTTATCATTTGAGGAGAGAACAAGGGTACCGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCACCGAAAAATGTGATCTaGTGGAATCTTCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPPKNVI*WNLLAA Trigger: AGCTGCGAGAAGATTCCATCAGATCACATTTTTCGG...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR TCA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCAAGCCACCGAAAAATGTaGTCTGATGGAATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PAARTLNSIALFHYISLPSHRKM*SDGIFS Trigger: CGAGAAGATTCCATCAGATCACATTTTTCGGTGGCT...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR TCA 90 bp | TTGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGCCACCGAAAAATGTaGTCTGATGGAATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRCFIILVCHEMRGQKADSHRKM*SDGIFS Trigger: CGAGAAGATTCCATCAGATCACATTTTTCGGTGGCT...ATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | TTGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATTTGGAGGGACGAGTATaGTTGTTTAGCTTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRCFIILVCHEMRGQKADLEGRV*LFSFRV Trigger: GACTCTGAAGCTAAACAAGCATACTCGTCCCTCCAA...ATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR GCA 90 bp | TTGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATCTAGGCCACATGATTTaGAAGGAGAGCTGTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRCFIILVCHEMRGQKADLGHMI*KESCWY Trigger: ATACCAACAGCTCTCCTTGCAAATCATGTGGCCTAG...ATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAAGTTTTGTTTCTGAGTTCAGCTTCTCTCCCAGATCTAAGACAATAATAGAACGTAGAGGAGGATaGCGTCATGGAACCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PESFVSEFSFSPRSKTIIERRGG*RHGTLQ Trigger: TTGAAGGGTTCCATGACGCCATCCTCCTCTACGTTC...TATTATTGTCTTAGATCTGGGAGAGAAGCTGAACTCAGAAACAAAACTTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR CCA 90 bp | TGCTCCGTTGATGTCTGTCCTTCCATCTATCTCTTTAAGGAATCTCAAGTAGACTATGCTCCACGATTCTaGTCTCATCTAGTCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVDVCPSIYLFKESQVDYAPRF*SHLVSV Trigger: AACTGAGACTAGATGAGACCAGAATCGTGGAGCATA...GTCTACTTGAGATTCCTTAAAGAGATAGATGGAAGGACAGACATCAACGGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR CAA 72 bp | TGTGTTGGGAACAGATATGACTCTACCCAGAAAGTTTaGTTTCTGAGTTCAGCTTCTCTCCCAGATCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVGNRYDSTQKV*FLSSASLPDLR Trigger: TCTTAGATCTGGGAGAGAAGCTGAACTCAGAAACAAAACTTTCTGGGTAGAGTCATATCTGTTCCCAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGTGATCCGAAAAATGTGATCTaGTGGAATCTTCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFIILVCHEMRGQKADSDPKNVI*WNLLAA Trigger: AGCTGCGAGAAGATTCCATCAGATCACATTTTTCGG...ATCACTATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR CAA 72 bp | CACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATaGTCCTCTTATTGGGTGTTAAATTCTTTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCIPSLEISFIP*SSYWVLNSFQE Trigger: TTCTTGGAAAGAATTTAACACCCAATAAGAGGACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| 3UTR CAA 72 bp | GTAAAAATGAACTCGGTATCCTATTATGATTCACACTaGGGGAAATGGACCTCCTGGTCCTGTGCATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKMNSVSYYDSH*GKWTSWSCAYK Trigger: TTTATATGCACAGGACCAGGAGGTCCATTTCCCCAAGTGTGAATCATAATAGGATACCGAGTTCATTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCATTATTCTGTTCTAAAGACCAACTGAAAAATAGACAGATCCCTCCAGTGTATGCTCCACGATTCTaGTCTCATCTAGTCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFCSKDQLKNRQIPPVYAPRF*SHLVSV Trigger: AACTGAGACTAGATGAGACCAGAATCGTGGAGCATA...CACTGGAGGGATCTGTCTATTTTTCAGTTGGTCTTTAGAACAGAATAATGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| 3UTR CAA 72 bp | GAGAACATACTGTTATATTTGGGCTATGTGGTATTCTaGCTGAATAGAAACCTTTACAAGAACACGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ENILLYLGYVVF*LNRNLYKNTRT Trigger: TGTGCGCGTGTTCTTGTAAAGGTTTCTATTCAGCAAGAATACCACATAGCCCAAATATAACAGTATGTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS TCA 90 bp | GCCGAGCCACCGGCGCCGCCGCGTACTCGCACACGGGCCCCAGGATaGGATCCGGCTTGGCGCCGCGCGCCGCCGCCACGCGGTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: AEPPAPPRTRTRAPG*DPAWRRAPPPRGPQ Trigger: TTGTGGACCGCGTGGCGGCGGCGCGCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGTGCGAGTACGCGGCGGCGCCGGTGGCTCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS GCA 90 bp | GCACCTCGATCTTTTGAGCCGCCAGCGCCTCTCTCGCCCGGCGCCTaGTGCCTGGCCGGGTGTCCCCGGCGCCGCTGCTCGCGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: APRSFEPPAPLSPGA*CLAGCPRRRCSRRQ Trigger: CTGGCGGCGCGAGCAGCGGCGCCGGGGACACCCGGCCAGGCAGCAGGCGCCGGGCGAGAGAGGCGCTGGCGGCTCAAAAGATCGAGGTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS TCA 90 bp | AAACCGGCGGCCAGCGCTCCTGCGGACAGCATCGGCAGGTCCCAGTaGGACGCCAGCCGAGCCACCGGCGCCGCCGCGTACTCGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: KPAASAPADSIGRSQ*DASRATGAAAYSHT Trigger: CGTGTGCGAGTACGCGGCGGCGCCGGTGGCTCGGCTGGCGTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS TCA 90 bp | GATCCGGCTTGGCGCCGCGCGCCGCCGCCACGCGGTCCACAAGACTaGAGAGCGCGCGGTTGCCGCAGTCCGAGTCTTCGTAGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: DPAWRRAPPPRGPQD*RARGCRSPSLRRPP Trigger: AGGTGGCCTACGAAGACTCGGACTGCGGCAACCGCGCGCTCTTCAGTCTTGTGGACCGCGTGGCGGCGGCGCGCGGCGCCAAGCCGGATC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS GCA 90 bp | CCTGGAAGCGAGTGCCTGGCGGCAGCAGCTTCCTCCCGGTGCCATTaGCCTCCACGCTACGCAGCGCGTACTCGATGGCCGGCCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSECLAAAASSRCH*PPRYAARTRWPASP Trigger: GGGTGAGGCCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS GCA 90 bp | AGGCCACCTGGAAGCGAGTGCCTGGCGGCAGCAGCTTCCTCCCGGTaGCATTGCCCTCCACGCTACGCAGCGCGTACTCGATGGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPGSECLAAAASSR*HCPPRYAARTRWPA Trigger: GGCCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGTGGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS GCA 90 bp | CGCGGTTGCCGCAGTCCGAGTCTTCGTAGGCCACCTGGAAGCGAGTaGCTGGCGGCAGCAGCTTCCTCCCGGTGCCATTGCCCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: RGCRSPSLRRPPGSE*LAAAASSRCHCPPR Trigger: GCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGTGGCCTACGAAGACTCGGACTGCGGCAACCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 90 bp | GCAGGCGCCACGCGCGTGAGGTGCGAGTATTCCGTGTCCTTGTGCTaGAAACCGGCGGCCAGCGCTCCTGCGGACAGCATCGGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGATRVRCEYSVSLC*KPAASAPADSIGRS Trigger: GGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATACTCGCACCTCACGCGCGTGGCGCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS GCA 90 bp | CGAGTATTCCGTGTCCTTGTGCTGGAAACCGGCGGCCAGCGCTCCTaGGGACAGCATCGGCAGGTCCCAGTGAGACGCCAGCCGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVFRVLVLETGGQRS*GQHRQVPVRRQPSH Trigger: GTGGCTCGGCTGGCGTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATACTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS CCA 90 bp | TCCTCCCGGTGCCATTGCCCTCCACGCTACGCAGCGCGTACTCGATaGCCGGCCTCACCCGGGCCAGCGAGAACAAGTACGAATCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCHCPPRYAARTR*PASPGPARTSTNRP Trigger: GGGACGATTCGTACTTGTTCTCGCTGGCCCGGGTGAGGCCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS CCA 90 bp | GTTGCCGCAGTCCGAGTCTTCGTAGGCCACCTGGAAGCGAGTGCCTaGCGGCAGCAGCTTCCTCCCGGTGCCATTGCCCTCCACGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: VAAVRVFVGHLEASA*RQQLPPGAIALHAT Trigger: CGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGTGGCCTACGAAGACTCGGACTGCGGCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS TCA 90 bp | CGAGCATCATCTCTCCCATCTTGGCGTAGGCAGGCGCCACGCGCGTaGGGTGCGAGTATTCCGTGTCCTTGTGCTGGAAACCGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RASSLPSWRRQAPRA*GASIPCPCAGNRRP Trigger: TGGCCGCCGGTTTCCAGCACAAGGACACGGAATACTCGCACCTCACGCGCGTGGCGCCTGCCTACGCCAAGATGGGAGAGATGATGCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | CCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCAAAGGATGAGATCCGGCTaGGCGCCGCGCGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRVNCPQSNQDMDAADFQRMRSG*APRAAA Trigger: GGCGGCGGCGCGCGGCGCCAAGCCGGATCTCATCCT...TTGAAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACAGGATGAGATCCGGCTaGGCGCCGCGCGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FYPRVNCPQSNQDMDAADRMRSG*APRAAA Trigger: GGCGGCGGCGCGCGGCGCCAAGCCGGATCTCATCCT...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGACTGAAGAGCGCGCGGTaGCCGCAGTCCGAGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CGRWTQPSSTTNLSPSSRLKSAR*PQSESS Trigger: CGAAGACTCGGACTGCGGCAACCGCGCGCTCTTCAG...TCTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATCCATACCGGTCCCCGTaGGCATCTATGGACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPVPERGALHSQPGDFFHPYRSP*ASMDTC Trigger: GCAGGTGTCCATAGATGCCAACGGGGACCGGTATGG...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGCCATACCGGTCCCCGTaGGCATCTATGGACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MWTLDAAFINHKPVPQFQPYRSP*ASMDTC Trigger: GCAGGTGTCCATAGATGCCAACGGGGACCGGTATGG...CTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATTCCATTGTTTCCTCCCGGTGCCATaGCCCTCCACGCTACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRERGTAFPAWRFLSFHCFLPVP*PSTLRS Trigger: GCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAA...ACAATGGAATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS GCA 90 bp | GAAATAACAGTTCCTCTCGAGTTTGTCGTCGCTGTAGACCAGGGCTaGACGGCTCCAGTGGTGGTGGCGAAACAGAGCGAGCATCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: EITVPLEFVVAVDQG*TAPVVVAKQSEHHL Trigger: GAGATGATGCTCGCTCTGTTTCGCCACCACCACTGGAGCCGTGCAGCCCTGGTCTACAGCGACGACAAACTCGAGAGGAACTGTTATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS CCA 90 bp | CGCTGCCTTGGATGTAGCGCACTATGTCGTCCAGGTCCAAGTCTTTaGTCTCGTCGAAATTGTAGGCAGACGTGTGCAACCCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCLGCSALCRPGPSL*SRRNCRQTCATPPP Trigger: AGGAGGAGGGGTTGCACACGTCTGCCTACAATTTCGACGAGACCAAAGACTTGGACCTGGACGACATAGTGCGCTACATCCAAGGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 90 bp | TGTCAGTCATGGCAACCACAGAGAAGTCCCCATACCGGTCCCCGTTaGCATCTATGGACACCTGCCCGGCGATACCTTCAAATGTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CQSWQPQRSPHTGPR*HLWTPARRYLQMSC Trigger: ACAGGACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTGTGGTTGCCATGACTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCCATACCGGTCCCCGTaGGCATCTATGGACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YPRVNCPQSNQDMDAADFPYRSP*ASMDTC Trigger: GCAGGTGTCCATAGATGCCAACGGGGACCGGTATGG...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTAAGCACCTCGATCTTTaGAGCCGCCAGCGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YPRVNCPQSNQDMDAADFKHLDL*SRQRLS Trigger: AGAGAGGCGCTGGCGGCTCAAAAGATCGAGGTGCTT...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | CCAGCAGCCAGAACACTTAACAGCATTGCGTTGTTTCATTATATTAGTTTGCCATTCCTCCCGGTGCCATaGCCCTCCACGCTACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAARTLNSIALFHYISLPFLPVP*PSTLRS Trigger: GCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAA...TGGCAAACTAATATAATGAAACAACGCAATGCTGTTAAGTGTTCTGGCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | ATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCAGTTCCAGGATGTTGCTTTCCTCTaGCTGATTTCGCCTCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: MWTLDAAFINHKPVPQFQDVAFL*LISPLN Trigger: ATTGAGAGGCGAAATCAGCAAGAGGAAAGCAACATC...CTGGAACTGGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | CCCCCAGTTCCAGAGAGAGGGGCACTGCATTCCCAGCCTGGAGATTTCTTTCATGATGTTGCTTTCCTCTaGCTGATTTCGCCTCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPVPERGALHSQPGDFFHDVAFL*LISPLN Trigger: ATTGAGAGGCGAAATCAGCAAGAGGAAAGCAACATC...ATGAAAGAAATCTCCAGGCTGGGAATGCAGTGCCCCTCTCTCTGGAACTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGTCTTGCTGTCAAATTCTCACTGTCTGCTTATTCTTGAGGGAAAGGGGTAAGCACCTCGATCTTTaGAGCCGCCAGCGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSCCQILTVCLFLRERGKHLDL*SRQRLS Trigger: AGAGAGGCGCTGGCGGCTCAAAAGATCGAGGTGCTT...ACCCCTTTCCCTCAAGAATAAGCAGACAGTGAGAATTTGACAGCAAGACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS-3UTR CAA 90 bp | AGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCTGTCCCCCCTCCTCATTGAGCCCTaGTTTCTCAACAGAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPECGRWTQPSSTTNLSPLLIEP*FLNRTF Trigger: AAAAGTTCTGTTGAGAAACAAGGGCTCAATGAGGAG...GGGGGACAGGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS GCA 90 bp | GATTCTTCTAGGCCACCTGATGATTTGCAAGGAGAGCTGTTGGTATaGTCCACGATTCTGGTCTCATCTAGTCTCAGTTTCAAAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DSSRPPDDLQGELLV*STILVSSSLSFKGP Trigger: GGGCCCTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATCAGGTGGCCTAGAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS GCA 90 bp | GCAGATTCTTCTAGGCCACATGATTTGCAAGGAGAGCTGTTGGTATaGTCCACGATTCTGGTCTCATCTAGTCTCAGTTTCAAAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ADSSRPHDLQGELLV*STILVSSSLSFKGP Trigger: GGGCCCTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATGTGGCCTAGAAGAATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTGAGGGACGAGTATGCTaGTTTAGCTTCAGAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: YPRVNCPQSNQDMDAADFEGRVC*FSFRVV Trigger: CACGACTCTGAAGCTAAACAAGCATACTCGTCCCTC...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCTGGTTCTTCTCTCTGGGCATGTCCAGCACTTCTTGTGGAGACTGGCTTCTCCTCATTGAGCCCTaGTTTCTCAACAGAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSWFFSLGMSSTSCGDWLLLIEP*FLNRTF Trigger: AAAAGTTCTGTTGAGAAACAAGGGCTCAATGAGGAG...AAGCCAGTCTCCACAAGAAGTGCTGGACATGCCCAGAGAGAAGAACCAGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR CAA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCGGGCCCCAAGGATATTaGACATTCGATCGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTGPQGY*TFDRIW Trigger: CCAAATGCGATCGAATGTCAAATATCCTTGGGGCCC...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS-3UTR CAA 90 bp | CCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTCAATCTAGGCCACATGATTaGCAAGGAGAGCTGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PRVNCPQSNQDMDAADFQSRPHD*QGELLV Trigger: TACCAACAGCTCTCCTTGCAAATCATGTGGCCTAGA...TTGAAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACTTTTCTAGGCCACATGATTaGCAAGGAGAGCTGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YPRVNCPQSNQDMDAADFSRPHD*QGELLV Trigger: TACCAACAGCTCTCCTTGCAAATCATGTGGCCTAGA...AAAGTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS CCA 90 bp | AACTTCTCAAACTCAGGTTTCACGGTCCTCAGTAGGGTGACTGTTTaGAGGGACGAGTATGCTTGTTTAGCTTCAGAGTCGTGTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NFSNSGFTVLSRVTV*RDEYACLASESCLS Trigger: AGACAAACACGACTCTGAAGCTAAACAAGCATACTCGTCCCTCCAAACAGTCACCCTACTGAGGACCGTGAAACCTGAGTTTGAGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CCA 90 bp | CTGCAGATTCTTCTAGGCCACCTGATGATTTGCAAGGAGAGCTGTTaGTATGCTCCACGATTCTGGTCTCATCTAGTCTCAGTTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQILLGHLMICKESC*YAPRFWSHLVSVSK Trigger: CTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATCAGGTGGCCTAGAAGAATCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS-3UTR CAA 90 bp | TTCTATCCTCGTGTGAACTGCCCCCAAAGCAATCAAGATATGGACGCAGCAGACCTCCTCATTGAGCCCTaGTTTCTCAACAGAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FYPRVNCPQSNQDMDAADLLIEP*FLNRTF Trigger: AAAAGTTCTGTTGAGAAACAAGGGCTCAATGAGGAG...GTCTGCTGCGTCCATATCTTGATTGCTTTGGGGGCAGTTCACACGAGGATAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | ATGAATTCAGACCTGAATGTGGACGTTGGACGCAGCCTTCATCAACCACAAACCGATGTTGCTTTCCTCTaGCTGATTTCGCCTCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: MNSDLNVDVGRSLHQPQTDVAFL*LISPLN Trigger: ATTGAGAGGCGAAATCAGCAAGAGGAAAGCAACATC...GGTTTGTGGTTGATGAAGGCTGCGTCCAACGTCCACATTCAGGTCTGAATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS TCA 90 bp | TTCTGGTCTCATCTAGTCTCAGTTTCAAAGGGCCCCAAGGATATTTaGCATTCGATCGCATTTGGAACCGGCCTTCTTTCCCAAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FWSHLVSVSKGPKDI*HSIAFGTGLLSQSN Trigger: ATTACTTTGGGAAAGAAGGCCGGTTCCAAATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTGAAACTGAGACTAGATGAGACCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TTGCGTTGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATGAGGGACGAGTATGCTaGTTTAGCTTCAGAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRCFIILVCHEMRGQKADEGRVC*FSFRVV Trigger: CACGACTCTGAAGCTAAACAAGCATACTCGTCCCTC...ATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACAACGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGTGATGAGGGACGAGTATGCTaGTTTAGCTTCAGAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFIILVCHEMRGQKADSDEGRVC*FSFRVV Trigger: CACGACTCTGAAGCTAAACAAGCATACTCGTCCCTC...ATCACTATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCATTATATTAGTTTGCCATGAGATGAGAGGCCAGAAGGCAGATAGTGATGGGCCCCAAGGATATTaGACATTCGATCGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFIILVCHEMRGQKADSDGPQGY*TFDRIW Trigger: CCAAATGCGATCGAATGTCAAATATCCTTGGGGCCC...ATCACTATCTGCCTTCTGGCCTCTCATCTCATGGCAAACTAATATAATGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCATTATTCTGTTCTAAAGACCAACTGAAAAATAGACAGATCCCTCCAGTGGGGCCCCAAGGATATTaGACATTCGATCGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSLFCSKDQLKNRQIPPVGPQGY*TFDRIW Trigger: CCAAATGCGATCGAATGTCAAATATCCTTGGGGCCC...CACTGGAGGGATCTGTCTATTTTTCAGTTGGTCTTTAGAACAGAATAATGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
||
| CDS GCA 72 bp | TTTGAGCCGCCAGCGCCTCTCTCGCCCGGCGCCTGCTaGCTGGCCGGGTGTCCCCGGCGCCGCTGCTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FEPPAPLSPGAC*LAGCPRRRCSR Trigger: GCGCGAGCAGCGGCGCCGGGGACACCCGGCCAGGCAGCAGGCGCCGGGCGAGAGAGGCGCTGGCGGCTCAAA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS GCA 72 bp | TCTTTTGAGCCGCCAGCGCCTCTCTCGCCCGGCGCCTaGTGCCTGGCCGGGTGTCCCCGGCGCCGCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFEPPAPLSPGA*CLAGCPRRRCS Trigger: CGAGCAGCGGCGCCGGGGACACCCGGCCAGGCAGCAGGCGCCGGGCGAGAGAGGCGCTGGCGGCTCAAAAGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
||
| CDS TCA 72 bp | GCCAGCGCTCCTGCGGACAGCATCGGCAGGTCCCAGTaGGACGCCAGCCGAGCCACCGGCGCCGCCGCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ASAPADSIGRSQ*DASRATGAAAY Trigger: GTACGCGGCGGCGCCGGTGGCTCGGCTGGCGTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CAA 90 bp | GGCGCCGCCGCGTACTCGCACACGGGCCCCAGGATGAGATCCGGCTaGGCGCCGCGCGCCGCCGCCACGCGGTCCACAAGACTGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GAAAYSHTGPRMRSG*APRAAATRSTRLKS Trigger: GCTCTTCAGTCTTGTGGACCGCGTGGCGGCGGCGCGCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGTGCGAGTACGCGGCGGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | GCGTACTCGCACACGGGCCCCAGGATGAGATCCGGCTaGGCGCCGCGCGCCGCCGCCACGCGGTCCACAAGA | + |
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Preference number: 6 (lower is better) Translates to: AYSHTGPRMRSG*APRAAATRSTR Trigger: TCTTGTGGACCGCGTGGCGGCGGCGCGCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGTGCGAGTACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS TCA 72 bp | TGGCGCCGCGCGCCGCCGCCACGCGGTCCACAAGACTaGAGAGCGCGCGGTTGCCGCAGTCCGAGTCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: WRRAPPPRGPQD*RARGCRSPSLR Trigger: ACGAAGACTCGGACTGCGGCAACCGCGCGCTCTTCAGTCTTGTGGACCGCGTGGCGGCGGCGCGCGGCGCCA 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CAA 90 bp | ACCTGGAAGCGAGTGCCTGGCGGCAGCAGCTTCCTCCCGGTGCCATaGCCCTCCACGCTACGCAGCGCGTACTCGATGGCCGGCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: TWKRVPGGSSFLPVP*PSTLRSAYSMAGLT Trigger: GGTGAGGCCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | GAGTGCCTGGCGGCAGCAGCTTCCTCCCGGTGCCATTaGCCTCCACGCTACGCAGCGCGTACTCGATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ECLAAAASSRCH*PPRYAARTRWP Trigger: CGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | CGAGTGCCTGGCGGCAGCAGCTTCCTCCCGGTGCCATaGCCCTCCACGCTACGCAGCGCGTACTCGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: RVPGGSSFLPVP*PSTLRSAYSMA Trigger: GGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | GGCGCCACGCGCGTGAGGTGCGAGTATTCCGTGTCCTaGTGCTGGAAACCGGCGGCCAGCGCTCCTGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: GATRVRCEYSVS*CWKPAASAPAD Trigger: GTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATACTCGCACCTCACGCGCGTGGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | GGAAGCGAGTGCCTGGCGGCAGCAGCTTCCTCCCGGTaGCATTGCCCTCCACGCTACGCAGCGCGTACTCGA | + |
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Preference number: 6 (lower is better) Translates to: GSECLAAAASSR*HCPPRYAARTR Trigger: TCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | CGTGTCCTTGTGCTGGAAACCGGCGGCCAGCGCTCCTaGGGACAGCATCGGCAGGTCCCAGTGAGACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RVLVLETGGQRS*GQHRQVPVRRQ Trigger: CTGGCGTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | GCCACGCGCGTGAGGTGCGAGTATTCCGTGTCCTTGTaGTGGAAACCGGCGGCCAGCGCTCCTGCGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: ATRVRCEYSVSL*WKPAASAPADS Trigger: GCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATACTCGCACCTCACGCGCGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | TGCCATTGCCCTCCACGCTACGCAGCGCGTACTCGATaGCCGGCCTCACCCGGGCCAGCGAGAACAAGTACG | + |
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Preference number: 6 (lower is better) Translates to: CHCPPRYAARTR*PASPGPARTST Trigger: CGTACTTGTTCTCGCTGGCCCGGGTGAGGCCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | GTCCGAGTCTTCGTAGGCCACCTGGAAGCGAGTGCCTaGCGGCAGCAGCTTCCTCCCGGTGCCATTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: VRVFVGHLEASA*RQQLPPGAIAL Trigger: GAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCGCTTCCAGGTGGCCTACGAAGACTCGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | ACGCGCGTGAGGTGCGAGTATTCCGTGTCCTTGTGCTaGAAACCGGCGGCCAGCGCTCCTGCGGACAGCATC | + |
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Preference number: 6 (lower is better) Translates to: TRVRCEYSVSLC*KPAASAPADSI Trigger: GATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATACTCGCACCTCACGCGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS TCA 72 bp | TCTCTCCCATCTTGGCGTAGGCAGGCGCCACGCGCGTaGGGTGCGAGTATTCCGTGTCCTTGTGCTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SLPSWRRQAPRA*GASIPCPCAGN Trigger: GTTTCCAGCACAAGGACACGGAATACTCGCACCTCACGCGCGTGGCGCCTGCCTACGCCAAGATGGGAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | GTTCCTCTCGAGTTTGTCGTCGCTGTAGACCAGGGCTaGACGGCTCCAGTGGTGGTGGCGAAACAGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: VPLEFVVAVDQG*TAPVVVAKQSE Trigger: CTCGCTCTGTTTCGCCACCACCACTGGAGCCGTGCAGCCCTGGTCTACAGCGACGACAAACTCGAGAGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | TGGCAACCACAGAGAAGTCCCCATACCGGTCCCCGTTaGCATCTATGGACACCTGCCCGGCGATACCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: WQPQRSPHTGPR*HLWTPARRYLQ Trigger: TTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTGTGGTTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | ATGGCAACCACAGAGAAGTCCCCATACCGGTCCCCGTaGGCATCTATGGACACCTGCCCGGCGATACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MATTEKSPYRSP*ASMDTCPAIPS Trigger: TGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTGTGGTTGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 90 bp | GTGTCAGTCATGGCAACCACAGAGAAGTCCCCATACCGGTCCCCGTaGGCATCTATGGACACCTGCCCGGCGATACCTTCAAATGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSVMATTEKSPYRSP*ASMDTCPAIPSNVL Trigger: CAGGACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTGTGGTTGCCATGACTGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | TCCCCATACCGGTCCCCGTTGGCATCTATGGACACCTaGCCGGCGATACCTTCAAATGTCCTGTTCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SPYRSPLASMDT*PAIPSNVLFQV Trigger: GACTTGGAACAGGACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | CAGAGAAGTCCCCATACCGGTCCCCGTTGGCATCTATaGACACCTGCCCGGCGATACCTTCAAATGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: QRSPHTGPRWHL*TPARRYLQMSC Trigger: ACAGGACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS TCA 72 bp | CCTCCTCCTGAAAAACCTCGTGGACCCCCTCGAGGGTaGAATAACAGTTCCTCTCGAGTTTGTCGTCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PPPEKPRGPPRG*NNSSSRVCRRC Trigger: ACAGCGACGACAAACTCGAGAGGAACTGTTATTTCACCCTCGAGGGGGTCCACGAGGTTTTTCAGGAGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | GGATGTAGCGCACTATGTCGTCCAGGTCCAAGTCTTTaGTCTCGTCGAAATTGTAGGCAGACGTGTGCAACC | + |
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Preference number: 6 (lower is better) Translates to: GCSALCRPGPSL*SRRNCRQTCAT Trigger: GGTTGCACACGTCTGCCTACAATTTCGACGAGACCAAAGACTTGGACCTGGACGACATAGTGCGCTACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066529.5 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | CCGGCCTTCTTTCCCAAAGTAATCACCAATGACCTCTaGGGTGCCTGCTTCAGTGTCAGTCATGGCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: PAFFPKVITNDL*GACFSVSHGNH Trigger: GTGGTTGCCATGACTGACACTGAAGCAGGCACCCAAGAGGTCATTGGTGATTACTTTGGGAAAGAAGGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | AACTCAGGTTTCACGGTCCTCAGTAGGGTGACTGTTTaGAGGGACGAGTATGCTTGTTTAGCTTCAGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: NSGFTVLSRVTV*RDEYACLASES Trigger: CGACTCTGAAGCTAAACAAGCATACTCGTCCCTCCAAACAGTCACCCTACTGAGGACCGTGAAACCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | TTTCCCAAAGTAATCACCAATGACCTCTTGGGTGCCTaGTTCAGTGTCAGTCATGGCAACCACAGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FPKVITNDLLGA*FSVSHGNHREV Trigger: GACTTCTCTGTGGTTGCCATGACTGACACTGAAGCAGGCACCCAAGAGGTCATTGGTGATTACTTTGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | AGGCCACCTGATGATTTGCAAGGAGAGCTGTTGGTATaGTCCACGATTCTGGTCTCATCTAGTCTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPPDDLQGELLV*STILVSSSLSF Trigger: GAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATCAGGTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS GCA 72 bp | TGGAATCTTCTCGCAGCTCTCGATGCTTCCCGATGTTaGTTTCCTCTTGCTGATTTCGCCTCTCAATGGTTA | + |
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Preference number: 6 (lower is better) Translates to: WNLLAALDASRC*FPLADFASQWL Trigger: TAACCATTGAGAGGCGAAATCAGCAAGAGGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGAAGATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | ATTTGCAAGGAGAGCTGTTGGTATGCTCCACGATTCTaGTCTCATCTAGTCTCAGTTTCAAAGGGCCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: ICKESCWYAPRF*SHLVSVSKGPK Trigger: CTTGGGGCCCTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CCA 72 bp | CTTCTAGGCCACCTGATGATTTGCAAGGAGAGCTGTTaGTATGCTCCACGATTCTGGTCTCATCTAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLGHLMICKESC*YAPRFWSHLVS Trigger: TGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATCAGGTGGCCTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS TCA 72 bp | CATCTAGTCTCAGTTTCAAAGGGCCCCAAGGATATTTaGCATTCGATCGCATTTGGAACCGGCCTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HLVSVSKGPKDI*HSIAFGTGLLS Trigger: GGAAAGAAGGCCGGTTCCAAATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTGAAACTGAGACTAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS GCA 72 bp | TCTAGGCCACATGATTTGCAAGGAGAGCTGTTGGTATaGTCCACGATTCTGGTCTCATCTAGTCTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SRPHDLQGELLV*STILVSSSLSF Trigger: GAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATGTGGCCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | GATTCTTCTAGGCCACATGATTTGCAAGGAGAGCTGTaGGTATGCTCCACGATTCTGGTCTCATCTAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DSSRPHDLQGEL*VCSTILVSSSL Trigger: GAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATGTGGCCTAGAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 90 bp | TCTCAGTTTCAAAGGGCCCCAAGGATATTTGACATTCGATCGCATTaGGAACCGGCCTTCTTTCCCAAAGTAATCACCAATGACCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQFQRAPRIFDIRSH*EPAFFPKVITNDLL Trigger: CAAGAGGTCATTGGTGATTACTTTGGGAAAGAAGGCCGGTTCCAAATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTGAAACTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 90 bp | ACTGCAGATTCTTCTAGGCCACCTGATGATTTGCAAGGAGAGCTGTaGGTATGCTCCACGATTCTGGTCTCATCTAGTCTCAGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TADSSRPPDDLQGEL*VCSTILVSSSLSFK Trigger: TTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATCAGGTGGCCTAGAAGAATCTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066529.5 |
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| CDS CCA 72 bp | ATTCTTCTAGGCCACATGATTTGCAAGGAGAGCTGTTaGTATGCTCCACGATTCTGGTCTCATCTAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ILLGHMICKESC*YAPRFWSHLVS Trigger: TGAGACTAGATGAGACCAGAATCGTGGAGCATACCAACAGCTCTCCTTGCAAATCATGTGGCCTAGAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | CAAAGGGCCCCAAGGATATTTGACATTCGATCGCATTaGGAACCGGCCTTCTTTCCCAAAGTAATCACCAAT | + |
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Preference number: 6 (lower is better) Translates to: QRAPRIFDIRSH*EPAFFPKVITN Trigger: ATTGGTGATTACTTTGGGAAAGAAGGCCGGTTCCAAATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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| CDS CAA 72 bp | TCATCTAGTCTCAGTTTCAAAGGGCCCCAAGGATATTaGACATTCGATCGCATTTGGAACCGGCCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSLSFKGPQGY*TFDRIWNRPSF Trigger: GAAAGAAGGCCGGTTCCAAATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTGAAACTGAGACTAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066529.5 ENSMUST00000228489.2 ENSMUST00000228603.2 |
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