Pregenerated sensors for NPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027931Ensembl transcript IDs: ENSMUST00000029540.13, ENSMUST00000124760.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAATCTTTCCACAGTGGCTGAGCTGCTGTGGGAGAGGCGGAAGTTaGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: LIFPQWLSCCGRGGS*TPVSLLAQGGEVTR Trigger: CCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCTCAGCCACTGTGGAAAGATTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR CCA 90 bp | CCTTATAGTATGCTGTCTTGGCAAAGACTTGGAACTGGCCCTCCGTaGTTAGCAGGGAGCCATAATTGGAGCCTCGCTACAGAGATGAAC | + |
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Preference number: 1 (lower is better) Translates to: PYSMLSWQRLGTGPP*LAGSHNWSLATEMN Trigger: GTTCATCTCTGTAGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCATACTATAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CCA 90 bp | CAAAGACTTGGAACTGGCCCTCCGTGGTTAGCAGGGAGCCATAATTaGAGCCTCGCTACAGAGATGAACAATAGTCATCTATTGGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: QRLGTGPPWLAGSHN*SLATEMNNSHLLVS Trigger: GCTGACCAATAGATGACTATTGTTCATCTCTGTAGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR GCA 90 bp | CAGATGTTGGGAGGGTCGGTACAAGCTCCCACAAATCTGGTCAAGTaGTCATTCTGCACATCCCGCATATGTTTAAGTTCAAACAGGACT | + |
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Preference number: 1 (lower is better) Translates to: QMLGGSVQAPTNLVK*SFCTSRICLSSNRT Trigger: AGTCCTGTTTGAACTTAAACATATGCGGGATGTGCAGAATGAGCACTTGACCAGATTTGTGGGAGCTTGTACCGACCCTCCCAACATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CAA 90 bp | CCTAATCTTTCCACAGTGGCTGAGCTGCTGTGGGAGAGGCGGAAGTaGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PNLSTVAELLWERRK*DTRVIAGTGRGGDK Trigger: CTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCTCAGCCACTGTGGAAAGATTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR-3UTR TCA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTCTTTCCACAGTGGCTaGGCTGCTGTGGGAGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: VTQDCLPPANPENLFSLSSFHSG*AAVGEA Trigger: CGCCTCTCCCACAGCAGCTCAGCCACTGTGGAAAGA...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR-3UTR CCA 90 bp | CCATCTACCACGCAGTTGGATGACTTGAGGTTCCCATGGGAACCAATGGCCCCGGCAAAGACTTGGAACTaGCCCTCCGTGGTTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSTTQLDDLRFPWEPMAPAKTWN*PSVVSR Trigger: CCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGC...CGGGGCCATTGGTTCCCATGGGAACCTCAAGTCATCCAACTGCGTGGTAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CAA 90 bp | TCCTGTAGGCTCCCACGGGGACAGTACTCTGTGAGGATACAGATGTaGGGAGGGTCGGTACAAGCTCCCACAAATCTGGTCAAGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SCRLPRGQYSVRIQM*GGSVQAPTNLVKCS Trigger: TGAGCACTTGACCAGATTTGTGGGAGCTTGTACCGACCCTCCCAACATCTGTATCCTCACAGAGTACTGTCCCCGTGGGAGCCTACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTTCGTGTCAACTCAATGCGTTTCCGGTTCACACGTTTCACAGCCACGAGGGAACTGGCCCTCCGTaGTTAGCAGGGAGCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: DFSCQLNAFPVHTFHSHEGTGPP*LAGSHN Trigger: ATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCC...CTCGTGGCTGTGAAACGTGTGAACCGGAAACGCATTGAGTTGACACGAAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATGTTGGGAGGGTCGGTACAAGCTCCCACAAATCTGGTCAAGTGCTCATTCGTCTTGGCAAAGACTTaGAACTGGCCCTCCGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QMLGGSVQAPTNLVKCSFVLAKT*NWPSVV Trigger: AACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGAC...GAATGAGCACTTGACCAGATTTGTGGGAGCTTGTACCGACCCTCCCAACATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTTTTGTGACACAGGACTaGCTGCCTCCTGCAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: TLMGFAHRRSKATPCLSSFVTQD*LPPANP Trigger: GGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAA...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR-3UTR GCA 90 bp | AGATGTTGGGAGGGTCGGTACAAGCTCCCACAAATCTGGTCAAGTGCTCATTCTTTCGTGTCAACTCAATaGGTTTCCGGTTCACACGTT | + |
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Preference number: 2 (lower is better) Translates to: RCWEGRYKLPQIWSSAHSFVSTQ*VSGSHV Trigger: AACGTGTGAACCGGAAACGCATTGAGTTGACACGAA...AGAATGAGCACTTGACCAGATTTGTGGGAGCTTGTACCGACCCTCCCAACATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CCA 72 bp | CCACAGTGGCTGAGCTGCTGTGGGAGAGGCGGAAGTTaGACACCCGTGTCATTGCTGGCACAGGGAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: PQWLSCCGRGGS*TPVSLLAQGGE Trigger: CTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCTCAGCCACTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR GCA 72 bp | CTGGTTAGGTCCCTAATCTTTCCACAGTGGCTGAGCTaGTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: LVRSLIFPQWLS*CGRGGSWTPVS Trigger: TGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCTCAGCCACTGTGGAAAGATTAGGGACCTAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR CCA 72 bp | ATGCTGTCTTGGCAAAGACTTGGAACTGGCCCTCCGTaGTTAGCAGGGAGCCATAATTGGAGCCTCGCTACA | + |
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Preference number: 3 (lower is better) Translates to: MLSWQRLGTGPP*LAGSHNWSLAT Trigger: TGTAGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTTGGACACCCGTGTCATaGCTGGCACAGGGAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TLMGFAHRRSKATPCLSSWTPVS*LAQGGE Trigger: CTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCA...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR CCA 72 bp | TCACAGCCACGAGGTTGCCCTTATAGTATGCTGTCTTaGCAAAGACTTGGAACTGGCCCTCCGTGGTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: SQPRGCPYSMLS*QRLGTGPPWLA Trigger: TGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCATACTATAAGGGCAACCTCGTGGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CCA 72 bp | GGAACTGGCCCTCCGTGGTTAGCAGGGAGCCATAATTaGAGCCTCGCTACAGAGATGAACAATAGTCATCTA | + |
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Preference number: 3 (lower is better) Translates to: GTGPPWLAGSHN*SLATEMNNSHL Trigger: TAGATGACTATTGTTCATCTCTGTAGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CCA 72 bp | CCATCTACCACGCAGTTGGATGACTTGAGGTTCCCATaGGAACCAATGGCCCCGTTGTGTAGAAAGAGCATT | + |
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Preference number: 3 (lower is better) Translates to: PSTTQLDDLRFP*EPMAPLCRKSI Trigger: AATGCTCTTTCTACACAACGGGGCCATTGGTTCCCATGGGAACCTCAAGTCATCCAACTGCGTGGTAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR CCA 72 bp | AGATGTTGGGAGGGTCGGTACAAGCTCCCACAAATCTaGTCAAGTGCTCATTCTGCACATCCCGCATATGTT | + |
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Preference number: 3 (lower is better) Translates to: RCWEGRYKLPQI*SSAHSAHPAYV Trigger: AACATATGCGGGATGTGCAGAATGAGCACTTGACCAGATTTGTGGGAGCTTGTACCGACCCTCCCAACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCAAGTGCTCATTCTGCACATCCCGCATATGTTTAAGTTCAAACAGGACTTGTCTTGGCAAAGACTaGGAACTGGCCCTCCGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LVKCSFCTSRICLSSNRTCLGKD*ELALRG Trigger: ACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACA...AGTCCTGTTTGAACTTAAACATATGCGGGATGTGCAGAATGAGCACTTGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR GCA 72 bp | GGAGGGTCGGTACAAGCTCCCACAAATCTGGTCAAGTaGTCATTCTGCACATCCCGCATATGTTTAAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: GGSVQAPTNLVK*SFCTSRICLSS Trigger: TGAACTTAAACATATGCGGGATGTGCAGAATGAGCACTTGACCAGATTTGTGGGAGCTTGTACCGACCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| 3UTR GCA 72 bp | GTACAAGCTCCCACAAATCTGGTCAAGTGCTCATTCTaGACATCCCGCATATGTTTAAGTTCAAACAGGACT | + |
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Preference number: 3 (lower is better) Translates to: VQAPTNLVKCSF*TSRICLSSNRT Trigger: AGTCCTGTTTGAACTTAAACATATGCGGGATGTGCAGAATGAGCACTTGACCAGATTTGTGGGAGCTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTCCCGCCAGTGCGCGGTaGAGCGTCCCACCGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPPASAR*SVPPGQ Trigger: CTGCCCCGGTGGGACGCTTCACCGCGCACTGGCGGG...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAGCGGCACCCGCCAGTaGGCGGTGAAGCGTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: ERRKLDTRVIAGTGRGGDSGTRQ*AVKRPT Trigger: GGTGGGACGCTTCACCGCGCACTGGCGGGTGCCGCT...GTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | GAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACGGCTGTGCTCCCACTTaGGATCCACCGCGGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: ERRKLDTRVIAGTGRGGDGCAPT*DPPRPA Trigger: CGCTGGCCGCGGTGGATCTCAAGTGGGAGCACAGCC...GTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGCACAAGCGCCTGGTaGTCCCAGCCCAGCCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTSTSAW*SQPSRR Trigger: TCGACGGCTGGGCTGGGAGCACCAGGCGCTTGTGCT...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTGGTCGGAATGGGGGCTaGTCGCCCCGAGTCACACGC | + |
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Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPGRNGG*SPRVTR Trigger: GCGTGTGACTCGGGGCGAGCAGCCCCCATTCCGACC...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAGGAGCCACGGGCAGGTaGGGAAGCCATTCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTGATGR*GSHSQE Trigger: CTCCTGCGAATGGCTTCCCCACCTGCCCGTGGCTCC...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTTCCAGGCTGCTGGGCTaGAAGTCCTCCCAGCGCACC | + |
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Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPSRLLG*KSSQRT Trigger: GGTGCGCTGGGAGGACTTGCAGCCCAGCAGCCTGGA...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | AGCTGCTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGATCGCCCAGCTTGACATaGCTGGGTCCTGTGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SCCGRGGSWTPVSLLAQGSPSLT*LGPVRV Trigger: CACCCGCACAGGACCCAGCCATGTCAAGCTGGGCGA...TCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| 3UTR CAA 72 bp | TCCACAGTGGCTGAGCTGCTGTGGGAGAGGCGGAAGTaGGACACCCGTGTCATTGCTGGCACAGGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: STVAELLWERRK*DTRVIAGTGRG Trigger: TCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCTCAGCCACTGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATTCAGGGTCAGCCGACTaGCAGCGCTCCGAAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNSGSAD*QRSEGA Trigger: GGCACCTTCGGAGCGCTGGCAGTCGGCTGACCCTGA...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | CTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAAGCAGGGTGACCACCTaGATGGGTGTGCTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LWERRKLDTRVIAGTGRGSRVTT*MGVLSA Trigger: AGCAGAGAGCACACCCATGCAGGTGGTCACCCTGCT...TCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTACGGGTACGAGGTGTTaGTCAGCGGCAGCACCACGG | + |
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Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPTGTRC*SAAAPR Trigger: CCGTGGTGCTGCCGCTGACCAACACCTCGTACCCGT...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGTTCAGGACAACCCTaGAGGCACCTGTCTCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTSSGQP*RHLSRG Trigger: ACCCCGAGACAGGTGCCTTCAGGGTTGTCCTGAACT...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACATGCTGTTCTCCTTGTTaGACTTGCGCAGCGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTCCSPC*TCAAPG Trigger: GCCTGGCGCTGCGCAAGTTCAACAAGGAGAACAGCA...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACACACACGGGACCTGTGTaGATTCCAATGCGCAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTHTGPV*IPMRKR Trigger: GCGCTTGCGCATTGGAATTCACACAGGTCCCGTGTG...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTTTTCCCAGGGCTTCCTaGGAACAGGGCCCTGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPFPRAS*EQGPEH Trigger: GTGCTCAGGGCCCTGTTCCCAGGAAGCCCTGGGAAA...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAGGTGTGTCCTTGCTCTaGCTCCGGGTCTCTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTGVSLL*LRVSEA Trigger: AGCTTCAGAGACCCGGAGCCAGAGCAAGGACACACC...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATAAGCGCAGCTGTTCCTaGGGCCTATGGCGGATGCGG | + |
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Preference number: 4 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNKRSCS*GLWRMR Trigger: CCGCATCCGCCATAGGCCCCAGGAACAGCTGCGCTT...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGCCGCCGCGTTCTCGCTaGTGCCCAGCACCATACGGA | + |
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Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWPPRSR*CPAPYG Trigger: TCCGTATGGTGCTGGGCAGCAGCGAGAACGCGGCGG...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCCAGCCCAGCCGTCGATaGAGCGCCGTCACGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: VTQDCLPPANPENLFSLSQPSRR*SAVTKS Trigger: CGACTTCGTGACGGCGCTGCATCGACGGCTGGGCTG...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTCTCCTGAGGATCCTCTaGCCAGCACCTCTGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPLLRIL*PAPLHQ Trigger: CTGATGCAGAGGTGCTGGGCAGAGGATCCTCAGGAG...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAGCAGGGCCTCAGCTTTaGGCTTCTCCTCCAGATAAG | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTAGPQL*ASPPDK Trigger: CTTATCTGGAGGAGAAGCGCAAAGCTGAGGCCCTGC...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACACGCAGTTGGATGACTTaGGGTTCCCATGGGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTRSWMT*GSHGNQ Trigger: TTGGTTCCCATGGGAACCTCAAGTCATCCAACTGCG...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGCACCGCGGCCAGCGGTaGAGCGGTGTCGGAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSFLQVAISLPLSHSGAKHRGQR*SGVGAD Trigger: GTCTGCTCCGACACCGCTGCACCGCTGGCCGCGGTG...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTGGTGCCTCTCCAGGCTaGTGGGCTGCAAGTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTGLPASCKPRESLFSFLGASPG*WAASPP Trigger: GGGAGGACTTGCAGCCCAGCAGCCTGGAGAGGCACC...AAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | AGCTGCTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGTTCCTCCAGGTTGTTaGCGTACTGTTCCATGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCCGRGGSWTPVSLLAQGVPPGC*RTVPCV Trigger: CACGCATGGAACAGTACGCCAACAACCTGGAGGAAC...TCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR TCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGCTGGCTCCGGGTCTCTaGAGCTCTCGAGCCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWLAPGL*SSRAHS Trigger: ACTATGGGCTCGAGAGCTTCAGAGACCCGGAGCCAG...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGAACACCGCGGGGCTGTaGTCCCACTTGAGATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWNTAGL*SHLRST Trigger: GGTGGATCTCAAGTGGGAGCACAGCCCCGCGGTGTT...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR TCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGCACCCGCCACAACTCTaGGACCAGCTCCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWHPPQL*DQLLFQ Trigger: CTGGAAAAGGAGCTGGTCTCAGAGTTGTGGCGGGTG...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGAAGGGTGGCCGCTCCTaGGGATCCTCTGCCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSFLQVAISLPLSHSGAKKGGRS*GSSAQH Trigger: GTGCTGGGCAGAGGATCCTCAGGAGCGGCCACCCTT...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATCAGAGTCTCTGTCACTaGCTGGACATAGAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNQSLCH*LDIEQE Trigger: CTCCTGCTCTATGTCCAGGCAGTGACAGAGACTCTG...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | AGCTGCTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAACAAATCTGGTCAAGTaGTCATTCTGCACATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCCGRGGSWTPVSLLAQGTNLVK*SFCTSR Trigger: GCGGGATGTGCAGAATGAGCACTTGACCAGATTTGT...TCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATTACAGCATCGAGCAGTaGAAGTGCCATTCGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNYSIEQ*KCHSGY Trigger: GTAGCCCGAATGGCACTTGCACTGCTCGATGCTGTA...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTCTGTGTGAATTCCAATaGGCAAGCGCAGCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPLCEFQ*ASAAVP Trigger: AGGAACAGCTGCGCTTGCGCATTGGAATTCACACAG...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GGCCCTCCGTGGTTAGCAGGGAGCCATAATTGGAGCCTCGCTACAGAGATGAACGTGGAAAAGTGGTCTTaGTTGCAGGCTGGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPPWLAGSHNWSLATEMNVEKWS*LQAGSS Trigger: TGAGGACCCAGCCTGCAACCAAGACCACTTTTCCAC...GTTCATCTCTGTAGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
||
| 3UTR CAA 72 bp | CTCCCACGGGGACAGTACTCTGTGAGGATACAGATGTaGGGAGGGTCGGTACAAGCTCCCACAAATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRGQYSVRIQM*GGSVQAPTNLV Trigger: GACCAGATTTGTGGGAGCTTGTACCGACCCTCCCAACATCTGTATCCTCACAGAGTACTGTCCCCGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACGCCAAGAGTTTTAGCTaGTTCAGGAATTCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ERRKLDTRVIAGTGRGGDAKSFS*FRNSKY Trigger: GTACTTGGAATTCCTGAAGCAGCTAAAACTCTTGGC...GTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCCCCAGTTCCTCCAGGTaGCTCTGCAGATCCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTQDCLPPANPENLFSLSPSSSR*LCRSME Trigger: TTCCATGGATCTGCAGAGCCACCTGGAGGAACTGGG...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | ATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTGTTCCTGGGGCCTATaGCGGATGCGGAAGGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICDTGLPASCKPRESLFSCSWGL*RMRKER Trigger: ACGCTCCTTCCGCATCCGCCATAGGCCCCAGGAACA...AGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGCGGTTCCACATCCGCTaGGTGATGTTCTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWRFHIR*VMFSPS Trigger: TGATGGAGAGAACATCACTCAGCGGATGTGGAACCG...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATTATCCTGTCACACCTTaGAAGCTTCGGTTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNYPVTP*KLRFHI Trigger: GATGTGGAACCGAAGCTTCCAAGGTGTGACAGGATA...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | TCGTGTCAACTCAATGCGTTTCCGGTTCACACGTTTCACAGCCACGAGGTTGCCGTCTTGGTTGCAGGCTaGGTCCTCATTGTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCQLNAFPVHTFHSHEVAVLVAG*VLIVKA Trigger: GGCTTTGACAATGAGGACCCAGCCTGCAACCAAGAC...GGCAACCTCGTGGCTGTGAAACGTGTGAACCGGAAACGCATTGAGTTGACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGGTGGAAAAGTGGTCTTaGTTGCAGGCTGGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWVEKWS*LQAGSS Trigger: TGAGGACCCAGCCTGCAACCAAGACCACTTTTCCAC...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGTCCAGTGTGGAAAAGTaGTCTTGGTTGCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWSSVEK*SWLQAG Trigger: CCCAGCCTGCAACCAAGACCACTTTTCCACACTGGA...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | TCGTGTCAACTCAATGCGTTTCCGGTTCACACGTTTCACAGCCACGAGGTTGCCTCCAGTGTGGAAAAGTaGTCTTGGTTGCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCQLNAFPVHTFHSHEVASSVEK*SWLQAG Trigger: CCCAGCCTGCAACCAAGACCACTTTTCCACACTGGA...GGCAACCTCGTGGCTGTGAAACGTGTGAACCGGAAACGCATTGAGTTGACACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| CDS-3UTR CCA 90 bp | GACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTGGAACTGGCCCTCCGTaGTTAGCAGGGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: DTGLPASCKPRESLFSFLGTGPP*LAGSHN Trigger: ATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCC...AAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGGTCTTGGCAAAGACTTaGAACTGGCCCTCCGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWVLAKT*NWPSVV Trigger: AACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGAC...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | GACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTGGGGACAGTACTCTGTaGGGATACAGATGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTGLPASCKPRESLFSFLGDSTL*GYRCWE Trigger: CTCCCAACATCTGTATCCTCACAGAGTACTGTCCCC...AAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTCTTAGGGCAATTTCCTaGAGGATGATACCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPLRAIS*RMIPKL Trigger: CAGTTTTGGTATCATCCTTCAGGAAATTGCCCTAAG...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATCCCGTCATGGAAGGATaGTGGGATGATATTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNPVMEG*WDDIFQ Trigger: CTGAAAAATATCATCCCAGCATCCTTCCATGACGGG...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | GTATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTGCAAAGACTTGGAACTaGCCCTCCGTGGTTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFVTQDCLPPANPENLFSAKTWN*PSVVSR Trigger: CCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGC...AGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTCCCATGGGAACCAATaGCCCCGTTGTGTAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTQDCLPPANPENLFSLSSHGNQ*PRCVER Trigger: TCTTTCTACACAACGGGGCCATTGGTTCCCATGGGA...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | AGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACACAATTTCCTGAAGGATaGTACCAAAACTGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGGSWTPVSLLAQGGEVTQFPEG*YQNCRH Trigger: ATGTCTACAGTTTTGGTATCATCCTTCAGGAAATTG...TGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGGACTTGAGGTTCCCATaGGAACCAATGGCCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFLQVAISLPLSHSGAKDLRFP*EPMAPL Trigger: CAACGGGGCCATTGGTTCCCATGGGAACCTCAAGTC...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CCA 90 bp | ATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTCTTCCAGCACAGCCTTaGTCTCCGAAGACAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICDTGLPASCKPRESLFSLPAQP*SPKTSG Trigger: TCCACTTGTCTTCGGAGACCAAGGCTGTGCTGGAAG...AGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGTACCACGCAGTTGGATaGCTTGAGGTTCCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFLQVAISLPLSHSGAKYHAVG*LEVPMG Trigger: TCCCATGGGAACCTCAAGTCATCCAACTGCGTGGTA...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTAAAAGTGGTCTTGGTTaGAGGCTGGGTCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTGLPASCKPRESLFSFLKSGLG*RLGPHC Trigger: ACAATGAGGACCCAGCCTGCAACCAAGACCACTTTT...AAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCGTGTCAACTCAATaGGTTTCCGGTTCACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTQDCLPPANPENLFSLSFVSTQ*VSGSHV Trigger: AACGTGTGAACCGGAAACGCATTGAGTTGACACGAA...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGTGGCGTACTGTTCCATaGGTGACAGCAGGTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFLQVAISLPLSHSGAKWRTVP*VTAGCP Trigger: TGGACAACCTGCTGTCACGCATGGAACAGTACGCCA...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGGTCATGGAAGGATGCTaGGATGATATTTTTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWVMEGC*DDIFQA Trigger: GGCCTGAAAAATATCATCCCAGCATCCTTCCATGAC...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGAAGCTCCCACAAATCTaGTCAAGTGCTCATTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWKLPQI*SSAHSA Trigger: TGCAGAATGAGCACTTGACCAGATTTGTGGGAGCTT...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGAGCTCCTTTTCCAGCTaGATCTTCCTGTATATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DCLPPANPENLFSLSFRWSSFSS*IFLYMK Trigger: CTTCATATACAGGAAGATGCAGCTGGAAAAGGAGCT...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTAGCAGGAGCCCGTCATaGAAGGATGCTGGGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: TLMGFAHRRSKATPCLSSSRSPS*KDAGMI Trigger: TATCATCCCAGCATCCTTCCATGACGGGCTCCTGCT...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR CCA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTGTCTTGGTTGCAGGCTaGGTCCTCATTGTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLMGFAHRRSKATPCLSSVLVAG*VLIVKA Trigger: GGCTTTGACAATGAGGACCCAGCCTGCAACCAAGAC...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR TCA 90 bp | ATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTCGACGAACTCCTGGTaGTTTACTGTGATGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICDTGLPASCKPRESLFSSTNSW*FTVMLS Trigger: ACTCAACATCACAGTAAATCACCAGGAGTTCGTCGA...AGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR TCA 90 bp | GTATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTAATGTCATTGGTGAGTaGGTACCGAAACATCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFVTQDCLPPANPENLFSNVIGE*VPKHPV Trigger: GACTGGATGTTTCGGTACTCACTCACCAATGACATT...AGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | GACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTAATAGGTTCGAACCTTaGCTTTGCCCTTCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTGLPASCKPRESLFSFLNRFEP*LCPSFP Trigger: TGGAAATGAAGGGCAAAGGCAAGGTTCGAACCTATT...AAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
||
| CDS-3UTR GCA 90 bp | TGGTTAGCAGGGAGCCATAATTGGAGCCTCGCTACAGAGATGAACAATAGTCATAAAAGTGGTCTTGGTTaGAGGCTGGGTCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLAGSHNWSLATEMNNSHKSGLG*RLGPHC Trigger: ACAATGAGGACCCAGCCTGCAACCAAGACCACTTTT...ATGACTATTGTTCATCTCTGTAGCGAGGCTCCAATTATGGCTCCCTGCTAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTGTTGCCCTTATAGTATaGTGTCTTGGCAAAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICDTGLPASCKPRESLFSVALIV*CLGKDL Trigger: CAAGTCTTTGCCAAGACAGCATACTATAAGGGCAAC...AGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR GCA 90 bp | ATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTGTCAAGTGCTCATTCTaGACATCCCGCATATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ICDTGLPASCKPRESLFSVKCSF*TSRICL Trigger: TAAACATATGCGGGATGTGCAGAATGAGCACTTGAC...AGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR TCA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTCGAGCCCATAGTCTGTaGTCTTTAACACAAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLMGFAHRRSKATPCLSSRAHSL*SLTQNV Trigger: GACGTTTTGTGTTAAAGATCACAGACTATGGGCTCG...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | ATGCCCAGAGCCGGGGCGCCAGCCGTCAGCAGCGGCACCCGCCAGTaGGCGGTGAAGCGTCCCACCGGGGCAGCAGAGTATACGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MPRAGAPAVSSGTRQ*AVKRPTGAAEYTQP Trigger: CGGCTGCGTATACTCTGCTGCCCCGGTGGGACGCTTCACCGCGCACTGGCGGGTGCCGCTGCTGACGGCTGGCGCCCCGGCTCTGGGCAT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | GCGGTGCAGCGGTGTCGGAGCAGACGCCCGCCGCGTTCTCGCTGCTaGCCAGCACCATACGGACCGTCCAACCCGGCAGCAAGTCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVQRCRSRRPPRSRC*PAPYGPSNPAASPA Trigger: GGCCGGACTTGCTGCCGGGTTGGACGGTCCGTATGGTGCTGGGCAGCAGCGAGAACGCGGCGGGCGTCTGCTCCGACACCGCTGCACCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 90 bp | CCACCGCCGGCCCTACACGCGCCCAAGACCACGGGTACGAGGTGTTaGTCAGCGGCAGCACCACGGCCACGGTCAGGTCGCTCGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPALHAPKTTGTRC*SAAAPRPRSGRSRG Trigger: GCCACGCGAGCGACCTGACCGTGGCCGTGGTGCTGCCGCTGACCAACACCTCGTACCCGTGGTCTTGGGCGCGTGTAGGGCCGGCGGTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS TCA 90 bp | ATACGCAGCCGGGGCCCAGGAACACCGCGGGGCTGTGCTCCCACTTaGGATCCACCGCGGCCAGCGGTGCAGCGGTGTCGGAGCAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: IRSRGPGTPRGCAPT*DPPRPAVQRCRSRR Trigger: GCGTCTGCTCCGACACCGCTGCACCGCTGGCCGCGGTGGATCTCAAGTGGGAGCACAGCCCCGCGGTGTTCCTGGGCCCCGGCTGCGTAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | CCAGCGGTGCAGCGGTGTCGGAGCAGACGCCCGCCGCGTTCTCGCTaGTGCCCAGCACCATACGGACCGTCCAACCCGGCAGCAAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PAVQRCRSRRPPRSR*CPAPYGPSNPAASP Trigger: CGGACTTGCTGCCGGGTTGGACGGTCCGTATGGTGCTGGGCAGCAGCGAGAACGCGGCGGGCGTCTGCTCCGACACCGCTGCACCGCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | GCAGCAGAGTATACGCAGCCGGGGCCCAGGAACACCGCGGGGCTGTaGTCCCACTTGAGATCCACCGCGGCCAGCGGTGCAGCGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AAEYTQPGPRNTAGL*SHLRSTAASGAAVS Trigger: CGACACCGCTGCACCGCTGGCCGCGGTGGATCTCAAGTGGGAGCACAGCCCCGCGGTGTTCCTGGGCCCCGGCTGCGTATACTCTGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | TGGGTCCTGTGCGGGTGGTTAACGCGTACTCATCCTTCACCCCGATaGCCAGAGCCGGGGCGCCAGCCGTCAGCAGCGGCACCCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WVLCGWLTRTHPSPR*PEPGRQPSAAAPAS Trigger: ACTGGCGGGTGCCGCTGCTGACGGCTGGCGCCCCGGCTCTGGGCATCGGGGTGAAGGATGAGTACGCGTTAACCACCCGCACAGGACCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | AGCCGACTGCCAGCGCTCCGAAGGTGCCTCTCCAGGCTGCTGGGCTaGAAGTCCTCCCAGCGCACCCGCCACAACTCTGAGACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPALRRCLSRLLG*KSSQRTRHNSETSS Trigger: GGAGCTGGTCTCAGAGTTGTGGCGGGTGCGCTGGGAGGACTTGCAGCCCAGCAGCCTGGAGAGGCACCTTCGGAGCGCTGGCAGTCGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | TCAGGGTCAGCCGACTGCCAGCGCTCCGAAGGTGCCTCTCCAGGCTaGTGGGCTGCAAGTCCTCCCAGCGCACCCGCCACAACTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSADCQRSEGASPG*WAASPPSAPATTLR Trigger: TCTCAGAGTTGTGGCGGGTGCGCTGGGAGGACTTGCAGCCCAGCAGCCTGGAGAGGCACCTTCGGAGCGCTGGCAGTCGGCTGACCCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | CCCCTCCACTATGAAGAAGCACGGCCGGTCGTCGCCCAGCCGATCTaGATAGAGCACAAGCGCCTGGTGCTCCCAGCCCAGCCGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLHYEEARPVVAQPI*IEHKRLVLPAQPSM Trigger: CATCGACGGCTGGGCTGGGAGCACCAGGCGCTTGTGCTCTATGCAGATCGGCTGGGCGACGACCGGCCGTGCTTCTTCATAGTGGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | GCAGGGAGCCATAATTGGAGCCTCGCCCACTCAGGGTCAGCCGACTaGCAGCGCTCCGAAGGTGCCTCTCCAGGCTGCTGGGCTGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSHNWSLAHSGSAD*QRSEGASPGCWAAS Trigger: ACTTGCAGCCCAGCAGCCTGGAGAGGCACCTTCGGAGCGCTGGCAGTCGGCTGACCCTGAGTGGGCGAGGCTCCAATTATGGCTCCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS TCA 90 bp | CCCAGCCCAGCCGTCGATGCAGCGCCGTCACGAAGTCGCCCAGCTTaGCATGGCTGGGTCCTGTGCGGGTGGTTAACGCGTACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPAVDAAPSRSRPA*HGWVLCGWLTRTHP Trigger: AGGATGAGTACGCGTTAACCACCCGCACAGGACCCAGCCATGTCAAGCTGGGCGACTTCGTGACGGCGCTGCATCGACGGCTGGGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 90 bp | CCCAGCCGTCGATGCAGCGCCGTCACGAAGTCGCCCAGCTTGACATaGCTGGGTCCTGTGCGGGTGGTTAACGCGTACTCATCCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: PSRRCSAVTKSPSLT*LGPVRVVNAYSSFT Trigger: GGTGAAGGATGAGTACGCGTTAACCACCCGCACAGGACCCAGCCATGTCAAGCTGGGCGACTTCGTGACGGCGCTGCATCGACGGCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 90 bp | GGCGGGCTCTCCTATCCTGCCCATCGTCTCTTTCCCAGGGCTTCCTaGGAACAGGGCCCTGAGCACCCTGAAGGCTTTGCCCAAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: GGLSYPAHRLFPRAS*EQGPEHPEGFAQTH Trigger: ATGTGTTTGGGCAAAGCCTTCAGGGTGCTCAGGGCCCTGTTCCCAGGAAGCCCTGGGAAAGAGACGATGGGCAGGATAGGAGAGCCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACCTGCTGTTCTCCTTGTaGAACTTGCGCAGCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERRKLDTRVIAGTGRGGDLLFSL*NLRSAR Trigger: CCTGGCGCTGCGCAAGTTCAACAAGGAGAACAGCAG...GTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | GAATTCCAATGCGCAAGCGCAGCTGTTCCTGGGGCCTATGGCGGATaGGGAAGGAGCGTACAGCATCGAGCAGTGCAAGTGCCATTCGGG | + |
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Preference number: 5 (lower is better) Translates to: EFQCASAAVPGAYGG*GRSVQHRAVQVPFG Trigger: CCCGAATGGCACTTGCACTGCTCGATGCTGTACGCTCCTTCCGCATCCGCCATAGGCCCCAGGAACAGCTGCGCTTGCGCATTGGAATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 90 bp | GAGTGCTGCATCCCCGCTCCCCGAGGAGCCAATAGGTTCGAACCTTaGCTTTGCCCTTCATTTCCACGTCACCTCGGAGCTCCAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ECCIPAPRGANRFEP*LCPSFPRHLGAPAQ Trigger: TTGAGCTGGAGCTCCGAGGTGACGTGGAAATGAAGGGCAAAGGCAAGGTTCGAACCTATTGGCTCCTCGGGGAGCGGGGATGCAGCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | AGCTGCTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGACAGGTGTACAGATCATaGAGCAGGGTGACCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCCGRGGSWTPVSLLAQGQVYRS*SRVTTC Trigger: GCAGGTGGTCACCCTGCTCAATGATCTGTACACCTG...TCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | AGCTGCTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGATCTTCCAGCACAGCCTaGGTCTCCGAAGACAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SCCGRGGSWTPVSLLAQGSSSTA*VSEDKW Trigger: CCACTTGTCTTCGGAGACCAAGGCTGTGCTGGAAGA...TCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GTATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTGGGCTGTGCTCCCACTaGAGATCCACCGCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFVTQDCLPPANPENLFSGLCSH*RSTAAS Trigger: GCTGGCCGCGGTGGATCTCAAGTGGGAGCACAGCCC...AGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTGTAGACATCCCCAGCTaGGGAGCCACGGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DTGLPASCKPRESLFSFLVDIPS*GATGRW Trigger: CCACCTGCCCGTGGCTCCCAAGCTGGGGATGTCTAC...AAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGAGGGGAGGTGACAAGGAATTTGCTGCTGTTCTCCTaGTTGAACTTGCGCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: GSWTPVSLLAQGGEVTRNLLLFS*LNLRSA Trigger: GGCGCTGCGCAAGTTCAACAAGGAGAACAGCAGCAA...ATTCCTTGTCACCTCCCCTCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | AGCTGCTGTGGGAGAGGCGGAAGTTGGACACCCGTGTCATTGCTGGCACAGGGACCCTTGACAATGTCATaGGTGAGTGAGTACCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SCCGRGGSWTPVSLLAQGPLTMS*VSEYRN Trigger: GTTTCGGTACTCACTCACCAATGACATTGTCAAGGG...TCCCTGTGCCAGCAATGACACGGGTGTCCAACTTCCGCCTCTCCCACAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGCGCCAGGCGGATCTGTaGAAAGGGTGGCCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSFLQVAISLPLSHSGAKRQADL*KGWPLL Trigger: CAGGAGCGGCCACCCTTTCAACAGATCCGCCTGGCG...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 90 bp | CCTTATAGTATGCTGTCTTGGCAAAGACTTGGAACTGGCCCTCCGTaGTTAGCAGGGAGCCATAATTGGAGCCTCGCCCACTCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PYSMLSWQRLGTGPP*LAGSHNWSLAHSGS Trigger: TGACCCTGAGTGGGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCATACTATAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCAGCACCCTGAAGGCTTaGCCCAAACACATCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: VTQDCLPPANPENLFSLSSTLKA*PKHIQV Trigger: CACCTGGATGTGTTTGGGCAAAGCCTTCAGGGTGCT...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGATGCGTGACAGCAGGTaGTCCAGGATGTTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DCLPPANPENLFSLSFRWMRDSR*SRMLLL Trigger: CAGCAGCAACATCCTGGACAACCTGCTGTCACGCAT...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGCAGGCTGGGTCCTCATaGTCAAAGCCACATTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DCLPPANPENLFSLSFRWQAGSS*SKPHLG Trigger: CCCTAAATGTGGCTTTGACAATGAGGACCCAGCCTG...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCTTCAGGTGGCCATCTACCACGCAGTaGGATGACTTGAGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DCLPPANPENLFSLSFRWPSTTQ*DDLRFP Trigger: TGGGAACCTCAAGTCATCCAACTGCGTGGTAGATGG...CCACCTGAAGGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GTATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTAAAGAGGGTGTGTCCTaGCTCTGGCTCCGGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFVTQDCLPPANPENLFSKEGVS*LWLRVS Trigger: AGAGACCCGGAGCCAGAGCAAGGACACACCCTCTTT...AGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | AGCCACGAGGTTGCCCTTATAGTATGCTGTCTTGGCAAAGACTTGGAACTGGCCGAAAAGTGGTCTTGGTaGCAGGCTGGGTCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SHEVALIVCCLGKDLELAEKWSW*QAGSSL Trigger: CAATGAGGACCCAGCCTGCAACCAAGACCACTTTTC...GGCCAGTTCCAAGTCTTTGCCAAGACAGCATACTATAAGGGCAACCTCGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124760.2 |
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| CDS-3UTR CAA 90 bp | GTATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTTGTCTTGGCAAAGACTaGGAACTGGCCCTCCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFVTQDCLPPANPENLFSCLGKD*ELALRG Trigger: ACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACA...AGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTTTCCGCAGTCCACAGTTTTTaGGCAAAGAGGGTGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTQDCLPPANPENLFSLSAVHSF*AKRVCP Trigger: AGGACACACCCTCTTTGCCAAAAAACTGTGGACTGC...GGAAAGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGTGGACTGGGAGTGAGGGGAGTATTTGTGACACAGGACTGCCTGCCTCCAATGGTCTCTACCTaGTACACATCAAAGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGGGLGVRGVFVTQDCLPPMVST*YTSKLS Trigger: AGACAACTTTGATGTGTACAAGGTAGAGACCATTGG...AGGCAGGCAGTCCTGTGTCACAAATACTCCCCTCACTCCCAGTCCACCACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGGAAAAGTGGTCTTGGTaGCAGGCTGGGTCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: FSFLQVAISLPLSHSGAKEKWSW*QAGSSL Trigger: CAATGAGGACCCAGCCTGCAACCAAGACCACTTTTC...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | ATTTGTGACACAGGACTGCCTGCCTCCTGCAAACCCCGAGAATCTCTTTTCTCTAGGTTGTCCAGGATGTaGCTGCTGTTCTCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ICDTGLPASCKPRESLFSRLSRM*LLFSLL Trigger: CAACAAGGAGAACAGCAGCAACATCCTGGACAACCT...AGAGAAAAGAGATTCTCGGGGTTTGCAGGAGGCAGGCAGTCCTGTGTCACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | TTCTCTTTCCTTCAGGTGGCAATTTCCCTCCCTCTAAGTCACAGTGGAGCTAAGGTATCCTGTCACACCTaGGAAGCTTCGGTTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: FSFLQVAISLPLSHSGAKVSCHT*EASVPH Trigger: ATGTGGAACCGAAGCTTCCAAGGTGTGACAGGATAC...CTTAGCTCCACTGTGACTTAGAGGGAGGGAAATTGCCACCTGAAGGAAAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTAGAAAGAGCATTCCCTaGACAATGTCATTGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLMGFAHRRSKATPCLSSRKSIP*TMSLVS Trigger: ACTCACCAATGACATTGTCAAGGGAATGCTCTTTCT...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGGGTTTTGCTCATAGGAGAAGCAAGGCAACCCCATGCCTCTCTTCTGTGAAGTTGAATTTCTaGTCAGCCAAGAGTTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLMGFAHRRSKATPCLSSVKLNF*SAKSFS Trigger: GCTAAAACTCTTGGCTGACAAGAAATTCAACTTCAC...AGAAGAGAGGCATGGGGTTGCCTTGCTTCTCCTATGAGCAAAACCCATTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | GCCGGGGCGCCAGCCGTCAGCAGCGGCACCCGCCAGTaGGCGGTGAAGCGTCCCACCGGGGCAGCAGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: AGAPAVSSGTRQ*AVKRPTGAAEY Trigger: ATACTCTGCTGCCCCGGTGGGACGCTTCACCGCGCACTGGCGGGTGCCGCTGCTGACGGCTGGCGCCCCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS TCA 72 bp | CGGGGCCCAGGAACACCGCGGGGCTGTGCTCCCACTTaGGATCCACCGCGGCCAGCGGTGCAGCGGTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPGTPRGCAPT*DPPRPAVQRCR Trigger: CCGACACCGCTGCACCGCTGGCCGCGGTGGATCTCAAGTGGGAGCACAGCCCCGCGGTGTTCCTGGGCCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS TCA 72 bp | CGCCAGCCGTCAGCAGCGGCACCCGCCAGTGCGCGGTaGAGCGTCCCACCGGGGCAGCAGAGTATACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RQPSAAAPASAR*SVPPGQQSIRS Trigger: GCTGCGTATACTCTGCTGCCCCGGTGGGACGCTTCACCGCGCACTGGCGGGTGCCGCTGCTGACGGCTGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | TCCACCGCCGGCCCTACACGCGCCCAAGACCACGGGTACGAGGTGTaGGTCAGCGGCAGCACCACGGCCACGGTCAGGTCGCTCGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: STAGPTRAQDHGYEV*VSGSTTATVRSLAW Trigger: CCACGCGAGCGACCTGACCGTGGCCGTGGTGCTGCCGCTGACCAACACCTCGTACCCGTGGTCTTGGGCGCGTGTAGGGCCGGCGGTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | CGGTGTCGGAGCAGACGCCCGCCGCGTTCTCGCTGCTaGCCAGCACCATACGGACCGTCCAACCCGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCRSRRPPRSRC*PAPYGPSNPAA Trigger: TGCTGCCGGGTTGGACGGTCCGTATGGTGCTGGGCAGCAGCGAGAACGCGGCGGGCGTCTGCTCCGACACCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | CAGCGGTGTCGGAGCAGACGCCCGCCGCGTTCTCGCTaGTGCCCAGCACCATACGGACCGTCCAACCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: QRCRSRRPPRSR*CPAPYGPSNPA Trigger: TGCCGGGTTGGACGGTCCGTATGGTGCTGGGCAGCAGCGAGAACGCGGCGGGCGTCTGCTCCGACACCGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | GCCGACTGCCAGCGCTCCGAAGGTGCCTCTCCAGGCTaGTGGGCTGCAAGTCCTCCCAGCGCACCCGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ADCQRSEGASPG*WAASPPSAPAT Trigger: TGTGGCGGGTGCGCTGGGAGGACTTGCAGCCCAGCAGCCTGGAGAGGCACCTTCGGAGCGCTGGCAGTCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | TATACGCAGCCGGGGCCCAGGAACACCGCGGGGCTGTaGTCCCACTTGAGATCCACCGCGGCCAGCGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: YTQPGPRNTAGL*SHLRSTAASGA Trigger: TGCACCGCTGGCCGCGGTGGATCTCAAGTGGGAGCACAGCCCCGCGGTGTTCCTGGGCCCCGGCTGCGTATA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | GCCCTACACGCGCCCAAGACCACGGGTACGAGGTGTTaGTCAGCGGCAGCACCACGGCCACGGTCAGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: ALHAPKTTGTRC*SAAAPRPRSGR Trigger: GCGACCTGACCGTGGCCGTGGTGCTGCCGCTGACCAACACCTCGTACCCGTGGTCTTGGGCGCGTGTAGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 72 bp | GGCCCTACACGCGCCCAAGACCACGGGTACGAGGTGTaGGTCAGCGGCAGCACCACGGCCACGGTCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: GPTRAQDHGYEV*VSGSTTATVRS Trigger: CGACCTGACCGTGGCCGTGGTGCTGCCGCTGACCAACACCTCGTACCCGTGGTCTTGGGCGCGTGTAGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | TGCGGGTGGTTAACGCGTACTCATCCTTCACCCCGATaGCCAGAGCCGGGGCGCCAGCCGTCAGCAGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: CGWLTRTHPSPR*PEPGRQPSAAA Trigger: TGCCGCTGCTGACGGCTGGCGCCCCGGCTCTGGGCATCGGGGTGAAGGATGAGTACGCGTTAACCACCCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | AGCACAAGCGCCTGGTGCTCCCAGCCCAGCCGTCGATaGAGCGCCGTCACGAAGTCGCCCAGCTTGACATGG | + |
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Preference number: 6 (lower is better) Translates to: STSAWCSQPSRR*SAVTKSPSLTW Trigger: CCATGTCAAGCTGGGCGACTTCGTGACGGCGCTGCATCGACGGCTGGGCTGGGAGCACCAGGCGCTTGTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS TCA 72 bp | GCCGTCGATGCAGCGCCGTCACGAAGTCGCCCAGCTTaGCATGGCTGGGTCCTGTGCGGGTGGTTAACGCGT | + |
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Preference number: 6 (lower is better) Translates to: AVDAAPSRSRPA*HGWVLCGWLTR Trigger: ACGCGTTAACCACCCGCACAGGACCCAGCCATGTCAAGCTGGGCGACTTCGTGACGGCGCTGCATCGACGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS TCA 72 bp | GTCGCTCACGCACCCGCATGTACAGCCCCTCCACTATaGAGAAGCACGGCCGGTCGTCGCCCAGCCGATCTG | + |
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Preference number: 6 (lower is better) Translates to: VAHAPACTAPPL*RSTAGRRPADL Trigger: CAGATCGGCTGGGCGACGACCGGCCGTGCTTCTTCATAGTGGAGGGGCTGTACATGCGGGTGCGTGAGCGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 72 bp | AGCCGTCGATGCAGCGCCGTCACGAAGTCGCCCAGCTaGACATGGCTGGGTCCTGTGCGGGTGGTTAACGCG | + |
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Preference number: 6 (lower is better) Translates to: SRRCSAVTKSPS*TWLGPVRVVNA Trigger: CGCGTTAACCACCCGCACAGGACCCAGCCATGTCAAGCTGGGCGACTTCGTGACGGCGCTGCATCGACGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | TCCCAGCCCAGCCGTCGATGCAGCGCCGTCACGAAGTCGCCCAGCTaGACATGGCTGGGTCCTGTGCGGGTGGTTAACGCGTACTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SQPSRRCSAVTKSPS*TWLGPVRVVNAYSS Trigger: GGATGAGTACGCGTTAACCACCCGCACAGGACCCAGCCATGTCAAGCTGGGCGACTTCGTGACGGCGCTGCATCGACGGCTGGGCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | TATGAAGAAGCACGGCCGGTCGTCGCCCAGCCGATCTaGATAGAGCACAAGCGCCTGGTGCTCCCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: YEEARPVVAQPI*IEHKRLVLPAQ Trigger: CTGGGCTGGGAGCACCAGGCGCTTGTGCTCTATGCAGATCGGCTGGGCGACGACCGGCCGTGCTTCTTCATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | GGAACTGGCCCTCCGTGGTTAGCAGGGAGCCATAATTaGAGCCTCGCCCACTCAGGGTCAGCCGACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GTGPPWLAGSHN*SLAHSGSADCQ Trigger: CTGGCAGTCGGCTGACCCTGAGTGGGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | CTCTGCATCAGCTGCCCCAGTTCCTCCAGGTGGCTCTaGAGATCCATGGAAGGTCGGAATGGGGGCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LCISCPSSSRWL*RSMEGRNGGCS Trigger: CGAGCAGCCCCCATTCCGACCTTCCATGGATCTGCAGAGCCACCTGGAGGAACTGGGGCAGCTGATGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | TGCGCAAGCGCAGCTGTTCCTGGGGCCTATGGCGGATaGGGAAGGAGCGTACAGCATCGAGCAGTGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: CASAAVPGAYGG*GRSVQHRAVQV Trigger: CACTTGCACTGCTCGATGCTGTACGCTCCTTCCGCATCCGCCATAGGCCCCAGGAACAGCTGCGCTTGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | ACTGTAGACATCCCCAGCTTGGGAGCCACGGGCAGGTaGGGAAGCCATTCGCAGGAGCTCAGGTGCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TVDIPSLGATGR*GSHSQELRCSP Trigger: TGGACTGCACCTGAGCTCCTGCGAATGGCTTCCCCACCTGCCCGTGGCTCCCAAGCTGGGGATGTCTACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | CAGCACCTCTGCATCAGCTGCCCCAGTTCCTCCAGGTaGCTCTGCAGATCCATGGAAGGTCGGAATGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: QHLCISCPSSSR*LCRSMEGRNGG Trigger: GCCCCCATTCCGACCTTCCATGGATCTGCAGAGCCACCTGGAGGAACTGGGGCAGCTGATGCAGAGGTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | GATGCGGAAGGAGCGTACAGCATCGAGCAGTGCAAGTaGCATTCGGGCTACCTCTCGGGCATGGAGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: DAEGAYSIEQCK*HSGYLSGMELS Trigger: GGACAGCTCCATGCCCGAGAGGTAGCCCGAATGGCACTTGCACTGCTCGATGCTGTACGCTCCTTCCGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | ATGGCGGATGCGGAAGGAGCGTACAGCATCGAGCAGTaGAAGTGCCATTCGGGCTACCTCTCGGGCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: MADAEGAYSIEQ*KCHSGYLSGME Trigger: CTCCATGCCCGAGAGGTAGCCCGAATGGCACTTGCACTGCTCGATGCTGTACGCTCCTTCCGCATCCGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 72 bp | CTCCTTGTTGAACTTGCGCAGCGCCAGGCGGATCTGTaGAAAGGGTGGCCGCTCCTGAGGATCCTCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLVELAQRQADL*KGWPLLRILCP Trigger: TGGGCAGAGGATCCTCAGGAGCGGCCACCCTTTCAACAGATCCGCCTGGCGCTGCGCAAGTTCAACAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | AGCAGTGCAAGTGCCATTCGGGCTACCTCTCGGGCATaGAGCTGTCCATTCCTCACTGGGAGCCCTGATACC | + |
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Preference number: 6 (lower is better) Translates to: SSASAIRATSRA*SCPFLTGSPDT Trigger: GGTATCAGGGCTCCCAGTGAGGAATGGACAGCTCCATGCCCGAGAGGTAGCCCGAATGGCACTTGCACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | ATTCCAATGCGCAAGCGCAGCTGTTCCTGGGGCCTATaGCGGATGCGGAAGGAGCGTACAGCATCGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: IPMRKRSCSWGL*RMRKERTASSS Trigger: ACTGCTCGATGCTGTACGCTCCTTCCGCATCCGCCATAGGCCCCAGGAACAGCTGCGCTTGCGCATTGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | TTCCCAGGGCTTCCTGGGAACAGGGCCCTGAGCACCCTGAAGGCTTaGCCCAAACACATCCAGGTGGAAGAAAACATAGTCCTCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: FPGLPGNRALSTLKA*PKHIQVEENIVLPS Trigger: ACTGGGGAGGACTATGTTTTCTTCCACCTGGATGTGTTTGGGCAAAGCCTTCAGGGTGCTCAGGGCCCTGTTCCCAGGAAGCCCTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | TGGCTCTGCAGATCCATGGAAGGTCGGAATGGGGGCTaGTCGCCCCGAGTCACACGCTCAATGATCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: WLCRSMEGRNGG*SPRVTRSMISF Trigger: AAAAGAGATCATTGAGCGTGTGACTCGGGGCGAGCAGCCCCCATTCCGACCTTCCATGGATCTGCAGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | GAGAGAGGCTGCCCACCAAAGCCAGAACCTCCAGTGTaGAAAAGTGGTCTTGGTTGCAGGCTGGGTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: ERGCPPKPEPPV*KSGLGCRLGPH Trigger: ATGAGGACCCAGCCTGCAACCAAGACCACTTTTCCACACTGGAGGTTCTGGCTTTGGTGGGCAGCCTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029540.13 ENSMUST00000124760.2 |
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| CDS CCA 72 bp | ATGCTGTCTTGGCAAAGACTTGGAACTGGCCCTCCGTaGTTAGCAGGGAGCCATAATTGGAGCCTCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: MLSWQRLGTGPP*LAGSHNWSLAH Trigger: GTGGGCGAGGCTCCAATTATGGCTCCCTGCTAACCACGGAGGGCCAGTTCCAAGTCTTTGCCAAGACAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | CCTCGGAGCTCCAGCTCAAAACCATCGAACTCTTCCAGCACAGCCTaGGTCTCCGAAGACAAGTGGATCCTGAGGGCTTCCCCATTAGAC | + |
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Preference number: 6 (lower is better) Translates to: PRSSSSKPSNSSSTA*VSEDKWILRASPLD Trigger: GTCTAATGGGGAAGCCCTCAGGATCCACTTGTCTTCGGAGACCAAGGCTGTGCTGGAAGAGTTCGATGGTTTTGAGCTGGAGCTCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 72 bp | CTTCCTGGGAACAGGGCCCTGAGCACCCTGAAGGCTTaGCCCAAACACATCCAGGTGGAAGAAAACATAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPGNRALSTLKA*PKHIQVEENIV Trigger: GACTATGTTTTCTTCCACCTGGATGTGTTTGGGCAAAGCCTTCAGGGTGCTCAGGGCCCTGTTCCCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 72 bp | TCCAGCTCAAAACCATCGAACTCTTCCAGCACAGCCTaGGTCTCCGAAGACAAGTGGATCCTGAGGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSKPSNSSSTA*VSEDKWILRAS Trigger: GGAAGCCCTCAGGATCCACTTGTCTTCGGAGACCAAGGCTGTGCTGGAAGAGTTCGATGGTTTTGAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | TGCCTGGACATAGAGCAGGAGCCCGTCATGGAAGGATaGTGGGATGATATTTTTCAGGCCATCCTCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: CLDIEQEPVMEG*WDDIFQAILHG Trigger: ACCATGGAGGATGGCCTGAAAAATATCATCCCAGCATCCTTCCATGACGGGCTCCTGCTCTATGTCCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | ACCTCCAGTGTGGAAAAGTGGTCTTGGTTGCAGGCTGGGTCCTCATaGTCAAAGCCACATTTAGGGATGTCAGGAGGTGGGTATCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TSSVEKWSWLQAGSS*SKPHLGMSGGGYPR Trigger: TCTGGGATACCCACCTCCTGACATCCCTAAATGTGGCTTTGACAATGAGGACCCAGCCTGCAACCAAGACCACTTTTCCACACTGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | AACTCTTCCAGCACAGCCTTGGTCTCCGAAGACAAGTaGATCCTGAGGGCTTCCCCATTAGACTCCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: NSSSTALVSEDK*ILRASPLDSIL Trigger: AAGAATGGAGTCTAATGGGGAAGCCCTCAGGATCCACTTGTCTTCGGAGACCAAGGCTGTGCTGGAAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | AACCTCCAGTGTGGAAAAGTGGTCTTGGTTGCAGGCTaGGTCCTCATTGTCAAAGCCACATTTAGGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: NLQCGKVVLVAG*VLIVKATFRDV Trigger: GACATCCCTAAATGTGGCTTTGACAATGAGGACCCAGCCTGCAACCAAGACCACTTTTCCACACTGGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029540.13 ENSMUST00000124760.2 |
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| CDS GCA 72 bp | ACCCGCCACAACTCTGAGACCAGCTCCTTTTCCAGCTaGATCTTCCTGTATATGAAGAAAGACACGATCAGA | + |
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Preference number: 6 (lower is better) Translates to: TRHNSETSSFSS*IFLYMKKDTIR Trigger: TCTGATCGTGTCTTTCTTCATATACAGGAAGATGCAGCTGGAAAAGGAGCTGGTCTCAGAGTTGTGGCGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 72 bp | AAAGCCAGAACCTCCAGTGTGGAAAAGTGGTCTTGGTaGCAGGCTGGGTCCTCATTGTCAAAGCCACATTTA | + |
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Preference number: 6 (lower is better) Translates to: KARTSSVEKWSW*QAGSSLSKPHL Trigger: TAAATGTGGCTTTGACAATGAGGACCCAGCCTGCAACCAAGACCACTTTTCCACACTGGAGGTTCTGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029540.13 ENSMUST00000124760.2 |
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| CDS CAA 72 bp | TTGTCTATGACAGCATCAAAACAGGTGTACAGATCATaGAGCAGGGTGACCACCTGCATGGGTGTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSMTASKQVYRS*SRVTTCMGVLS Trigger: AGAGAGCACACCCATGCAGGTGGTCACCCTGCTCAATGATCTGTACACCTGTTTTGATGCTGTCATAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CCA 72 bp | CAGTATAATCTGTGTTCTGACACAGCCATCAGCTCCTaGGAAGTACCATTAAAGTTCAGGACAACCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: QYNLCSDTAISS*EVPLKFRTTLK Trigger: CTTCAGGGTTGTCCTGAACTTTAATGGTACTTCCCAGGAGCTGATGGCTGTGTCAGAACACAGATTATACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | AAGGATGCTGGGATGATATTTTTCAGGCCATCCTCCATGGTGAAGTaGAATTTCTTGTCAGCCAAGAGTTTTAGCTGCTTCAGGAATTCC | + |
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Preference number: 6 (lower is better) Translates to: KDAGMIFFRPSSMVK*NFLSAKSFSCFRNS Trigger: GGAATTCCTGAAGCAGCTAAAACTCTTGGCTGACAAGAAATTCAACTTCACCATGGAGGATGGCCTGAAAAATATCATCCCAGCATCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS CAA 90 bp | GGGATGATATTTTTCAGGCCATCCTCCATGGTGAAGTTGAATTTCTaGTCAGCCAAGAGTTTTAGCTGCTTCAGGAATTCCAAGTACTCA | + |
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Preference number: 6 (lower is better) Translates to: GMIFFRPSSMVKLNF*SAKSFSCFRNSKYS Trigger: TGAGTACTTGGAATTCCTGAAGCAGCTAAAACTCTTGGCTGACAAGAAATTCAACTTCACCATGGAGGATGGCCTGAAAAATATCATCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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| CDS GCA 72 bp | GTGAAGTTGAATTTCTTGTCAGCCAAGAGTTTTAGCTaGTTCAGGAATTCCAAGTACTCAGGATTATCGGGT | + |
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Preference number: 6 (lower is better) Translates to: VKLNFLSAKSFS*FRNSKYSGLSG Trigger: ACCCGATAATCCTGAGTACTTGGAATTCCTGAAGCAGCTAAAACTCTTGGCTGACAAGAAATTCAACTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029540.13 |
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