RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056209

Ensembl transcript IDs: ENSMUST00000070215.8

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp CCCACCCCCTATTCTCTTCATCGAGAAAACCATTCTTaGACTTGTCCAGGAACATACGGAGCATGGCACCTG +
Preference number: 3 (lower is better)
Translates to: PTPYSLHRENHS*TCPGTYGAWHL
Trigger: CAGGTGCCATGCTCCGTATGTTCCTGGACAAGTTCAAGAATGGTTTTCTCGATGAAGAGAATAGGGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp AATAGAAAAGGGAAGCCTCAGGAACCACAGTCCATCCCTCCCTCCCACCCCCTAGTGAAGGAGCGGGTGTaGCCGGAGAGCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: NRKGKPQEPQSIPPSHPLVKERV*PESSQP
Trigger: CGGTTGTGAGCTCTCCGGCCACACCCGCTCCTTCAC...TAGGGGGTGGGAGGGAGGGATGGACTGTGGTTCCTGAGGCTTCCCTTTTCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR TCA 90 bp AAGGGAAGCCTCAGGAACCACAGTCCATCCCTCCCTCCCACCCCCTATTCTCTTACTTCAGGCGGAAGGTaGCAGGTGGTTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: KGSLRNHSPSLPPTPYSLTSGGR*QVVGVG
Trigger: TCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGT...AAGAGAATAGGGGGTGGGAGGGAGGGATGGACTGTGGTTCCTGAGGCTTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp TTGTCCCACCCCAATAGAAAAGGGAAGCCTCAGGAACCACAGTCCATCCCTCCCGCCAGTGATCCGAACTaGGCCAGAACCGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: LSHPNRKGKPQEPQSIPPASDPN*ARTGLQ
Trigger: CTGAAGTCCGGTTCTGGCCCAGTTCGGATCACTGGC...GGGAGGGATGGACTGTGGTTCCTGAGGCTTCCCTTTTCTATTGGGGTGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp TTGTCCCACCCCAATAGAAAAGGGAAGCCTCAGGAACCACAGTCCATCCCTCCCCGGGCTCGGCTCTCTTaGTTCAAGAACGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSHPNRKGKPQEPQSIPPRARLS*FKNAKA
Trigger: TGCTTTAGCGTTCTTGAACCAAGAGAGCCGAGCCCG...GGGAGGGATGGACTGTGGTTCCTGAGGCTTCCCTTTTCTATTGGGGTGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp GTGCTGGGGACTGAATCTGGGTTAGGTGGGTCAGAAGAGGTGTTCAAAGGTTGTTGCCCCTGTGCTTCTTaGCAGGAAGGATGCCACACA +
Preference number: 4 (lower is better)
Translates to: VLGTESGLGGSEEVFKGCCPCAS*QEGCHT
Trigger: TGTGTGGCATCCTTCCTGCCAAGAAGCACAGGGGCA...ACAACCTTTGAACACCTCTTCTGACCCACCTAACCCAGATTCAGTCCCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR TCA 90 bp AGAAAACCATTCTTGAACTTGTCCAGGAACATACGGAGCATGGCACCTGTAGCAAGAAACTGTCCATTGTaGCCGGGGCCGGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: RKPFLNLSRNIRSMAPVARNCPL*PGPGPS
Trigger: TGAGGGTCCCGGCCCCGGTCACAATGGACAGTTTCT...TGCTACAGGTGCCATGCTCCGTATGTTCCTGGACAAGTTCAAGAATGGTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp GTGCTGGGGACTGAATCTGGGTTAGGTGGGTCAGAAGAGGTGTTCAAAGGTTGTGCGGAAGGTGACAGGTaGTTGGAGTTGGAAATCATC +
Preference number: 4 (lower is better)
Translates to: VLGTESGLGGSEEVFKGCAEGDR*LELEII
Trigger: GATGATTTCCAACTCCAACCACCTGTCACCTTCCGC...ACAACCTTTGAACACCTCTTCTGACCCACCTAACCCAGATTCAGTCCCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR GCA 90 bp AGAAAACCATTCTTGAACTTGTCCAGGAACATACGGAGCATGGCACCTGTAGCAGTTGGCCACAGGAACTaGAATCTCCTGATTGTCGTG +
Preference number: 4 (lower is better)
Translates to: RKPFLNLSRNIRSMAPVAVGHRN*NLLIVV
Trigger: CACGACAATCAGGAGATTGCAGTTCCTGTGGCCAAC...TGCTACAGGTGCCATGCTCCGTATGTTCCTGGACAAGTTCAAGAATGGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp AGAAAACCATTCTTGAACTTGTCCAGGAACATACGGAGCATGGCACCTGTAGCAACAGGTGGTTGGAGTTaGAAATCATCCACACTGAGC +
Preference number: 4 (lower is better)
Translates to: RKPFLNLSRNIRSMAPVATGGWS*KSSTLS
Trigger: GCTCAGTGTGGATGATTTCCAACTCCAACCACCTGT...TGCTACAGGTGCCATGCTCCGTATGTTCCTGGACAAGTTCAAGAATGGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp ATTCTCTTCATCGAGAAAACCATTCTTGAACTTGTCCAGGAACATACGGAGCATACACTGAGCATGGGCTaGCAAGACAACCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ILFIEKTILELVQEHTEHTLSMG*QDNLRL
Trigger: CAACCTCAGGTTGTCTTGCCAGCCCATGCTCAGTGT...ATGCTCCGTATGTTCCTGGACAAGTTCAAGAATGGTTTTCTCGATGAAGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CCA 90 bp CCACCCCCTATTCTCTTCATCGAGAAAACCATTCTTGAACTTGTCCAGGAACATAAGGTGACAGGTGGTTaGAGTTGGAAATCATCCACA +
Preference number: 4 (lower is better)
Translates to: PPPILFIEKTILELVQEHKVTGG*SWKSST
Trigger: TGTGGATGATTTCCAACTCCAACCACCTGTCACCTT...ATGTTCCTGGACAAGTTCAAGAATGGTTTTCTCGATGAAGAGAATAGGGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 90 bp GGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTGGTTGGAGTTaGAAATCATCCACACTGAGCATGGGCTGGCAAGACAACCTGAGG +
Preference number: 5 (lower is better)
Translates to: GPEPDFRRKVTGGWS*KSSTLSMGWQDNLR
Trigger: CCTCAGGTTGTCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS GCA 90 bp ACTGAGCATGGGCTGGCAAGACAACCTGAGGTTGGCCACAGGAACTaGAATCTCCTGATTGTCGTGATCCCGGGCCACAACTTCCACCAC +
Preference number: 5 (lower is better)
Translates to: TEHGLARQPEVGHRN*NLLIVVIPGHNFHH
Trigger: GTGGTGGAAGTTGTGGCCCGGGATCACGACAATCAGGAGATTGCAGTTCCTGTGGCCAACCTCAGGTTGTCTTGCCAGCCCATGCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 90 bp GATCCGAACTGGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTaGTTGGAGTTGGAAATCATCCACACTGAGCATGGGCTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: DPNWARTGLQAEGDR*LELEIIHTEHGLAR
Trigger: TCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCCAGTTCGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 90 bp GTCGTTGTTTATACAAACGATCTGATGCCGGCCAGTGATCCGAACTaGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VVVYTNDLMPASDPN*ARTGLQAEGDRWLE
Trigger: CTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCCAGTTCGGATCACTGGCCGGCATCAGATCGTTTGTATAAACAACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CAA 90 bp AGGTTGTCCCACCCCAATAGAAAAGGGAAGCCTCAGGAACCACAGTCCATCCCTTCCTCCTCCTCAACCTaGAAAGTGAAGGAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: RLSHPNRKGKPQEPQSIPSSSST*KVKERV
Trigger: CACCCGCTCCTTCACTTTCAAGGTTGAGGAGGAGGA...AGGGATGGACTGTGGTTCCTGAGGCTTCCCTTTTCTATTGGGGTGGGACAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS-3UTR CAA 90 bp AAGGGAAGCCTCAGGAACCACAGTCCATCCCTCCCTCCCACCCCCTATTCTCTTGACAGGTGGTTGGAGTaGGAAATCATCCACACTGAG +
Preference number: 5 (lower is better)
Translates to: KGSLRNHSPSLPPTPYSLDRWLE*EIIHTE
Trigger: CTCAGTGTGGATGATTTCCAACTCCAACCACCTGTC...AAGAGAATAGGGGGTGGGAGGGAGGGATGGACTGTGGTTCCTGAGGCTTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS TCA 90 bp TCATCACTTTCTTCTTCAGAAAGGTCGTTGTTTATACAAACGATCTaGTGCCGGCCAGTGATCCGAACTGGGCCAGAACCGGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: SSLSSSERSLFIQTI*CRPVIRTGPEPDFR
Trigger: CCTGAAGTCCGGTTCTGGCCCAGTTCGGATCACTGGCCGGCATCAGATCGTTTGTATAAACAACGACCTTTCTGAAGAAGAAAGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS GCA 72 bp GGGCTGGCAAGACAACCTGAGGTTGGCCACAGGAACTaGAATCTCCTGATTGTCGTGATCCCGGGCCACAAC +
Preference number: 6 (lower is better)
Translates to: GLARQPEVGHRN*NLLIVVIPGHN
Trigger: GTTGTGGCCCGGGATCACGACAATCAGGAGATTGCAGTTCCTGTGGCCAACCTCAGGTTGTCTTGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CAA 90 bp TGGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTGGTTGGAGTaGGAAATCATCCACACTGAGCATGGGCTGGCAAGACAACCTGAG +
Preference number: 6 (lower is better)
Translates to: WARTGLQAEGDRWLE*EIIHTEHGLARQPE
Trigger: CTCAGGTTGTCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CAA 90 bp CCGAACTGGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTGGTaGGAGTTGGAAATCATCCACACTGAGCATGGGCTGGCAAGACAA +
Preference number: 6 (lower is better)
Translates to: PNWARTGLQAEGDRW*ELEIIHTEHGLARQ
Trigger: TTGTCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCCAGTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS GCA 72 bp CCCTCGGTAAGGCACAGCATGTTCAACGCCAGCACGTaGTCCGTGTCATCCTCCTCCTCAACCTTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: PSVRHSMFNAST*SVSSSSSTLKV
Trigger: CACTTTCAAGGTTGAGGAGGAGGATGACACGGAGCACGTGCTGGCGTTGAACATGCTGTGCCTTACCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 72 bp CCGGACTTCAGGCGGAAGGTGACAGGTGGTTGGAGTTaGAAATCATCCACACTGAGCATGGGCTGGCAAGAC +
Preference number: 6 (lower is better)
Translates to: PDFRRKVTGGWS*KSSTLSMGWQD
Trigger: GTCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 72 bp TGGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTaGTTGGAGTTGGAAATCATCCACACTGAGCATGGG +
Preference number: 6 (lower is better)
Translates to: WARTGLQAEGDR*LELEIIHTEHG
Trigger: CCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 72 bp TATACAAACGATCTGATGCCGGCCAGTGATCCGAACTaGGCCAGAACCGGACTTCAGGCGGAAGGTGACAGG +
Preference number: 6 (lower is better)
Translates to: YTNDLMPASDPN*ARTGLQAEGDR
Trigger: CCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGCCCAGTTCGGATCACTGGCCGGCATCAGATCGTTTGTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CAA 72 bp GCCAGAACCGGACTTCAGGCGGAAGGTGACAGGTGGTaGGAGTTGGAAATCATCCACACTGAGCATGGGCTG +
Preference number: 6 (lower is better)
Translates to: ARTGLQAEGDRW*ELEIIHTEHGL
Trigger: CAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGTTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 72 bp TCCTCCTCCTCAACCTTGAAAGTGAAGGAGCGGGTGTaGCCGGAGAGCTCACAACCGAAGAAGAAACTGTCC +
Preference number: 6 (lower is better)
Translates to: SSSSTLKVKERV*PESSQPKKKLS
Trigger: GGACAGTTTCTTCTTCGGTTGTGAGCTCTCCGGCCACACCCGCTCCTTCACTTTCAAGGTTGAGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CAA 72 bp ACCGGACTTCAGGCGGAAGGTGACAGGTGGTTGGAGTaGGAAATCATCCACACTGAGCATGGGCTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: TGLQAEGDRWLE*EIIHTEHGLAR
Trigger: TCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACCACCTGTCACCTTCCGCCTGAAGTCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS CCA 72 bp GGTTGGAGTTGGAAATCATCCACACTGAGCATGGGCTaGCAAGACAACCTGAGGTTGGCCACAGGAACTGCA +
Preference number: 6 (lower is better)
Translates to: GWSWKSSTLSMG*QDNLRLATGTA
Trigger: TGCAGTTCCTGTGGCCAACCTCAGGTTGTCTTGCCAGCCCATGCTCAGTGTGGATGATTTCCAACTCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8
CDS TCA 72 bp TCTTCTTCAGAAAGGTCGTTGTTTATACAAACGATCTaGTGCCGGCCAGTGATCCGAACTGGGCCAGAACCG +
Preference number: 6 (lower is better)
Translates to: SSSERSLFIQTI*CRPVIRTGPEP
Trigger: CGGTTCTGGCCCAGTTCGGATCACTGGCCGGCATCAGATCGTTTGTATAAACAACGACCTTTCTGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070215.8