Pregenerated sensors for NPLOC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039703Ensembl transcript IDs: ENSMUST00000044271.15, ENSMUST00000103017.4
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCAACACGTGAGGCGTGTGGGGAGCTCTTGGGCAGGTCTGCTCTaGCTTCCCAGGTGGGAGGCTCTGTTCAACCCCAGCACAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LQHVRRVGSSWAGLL*LPRWEALFNPSTAA Trigger: GGCTGCTGTGCTGGGGTTGAACAGAGCCTCCCACCTGGGAAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGCCTCACGTGTTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR CCA 90 bp | GGACGTGTTCAGTCCCTCCAACACGTGAGGCGTGTGGGGAGCTCTTaGGCAGGTCTGCTCTGCCTTCCCAGGTGGGAGGCTCTGTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: GRVQSLQHVRRVGSS*AGLLCLPRWEALFN Trigger: GTTGAACAGAGCCTCCCACCTGGGAAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGCCTCACGTGTTGGAGGGACTGAACACGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 90 bp | GAGGGGACCAGAACTCCAGGGCTGTCCAGACTTGAAGGGGCTGACTaGCAGGCAAGAGCCACCACTGCTCTGATGAACCACCCATGCTAC | + |
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Preference number: 1 (lower is better) Translates to: EGTRTPGLSRLEGAD*QARATTALMNHPCY Trigger: GTAGCATGGGTGGTTCATCAGAGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGGAGTTCTGGTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR TCA 90 bp | CCAATTTCAGGTGATTGGCTGGACGTGTTCAGTCCCTCCAACACGTaGGGCGTGTGGGGAGCTCTTGGGCAGGTCTGCTCTGCCTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: PISGDWLDVFSPSNT*GVWGALGQVCSAFP Trigger: TGGGAAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGCCTCACGTGTTGGAGGGACTGAACACGTCCAGCCAATCACCTGAAATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 90 bp | ACTGCAGGGCTGGGGTCAGAAAAATACTCATCCACACCCAGCCAGTaGATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGAGCACCCATG | + |
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Preference number: 1 (lower is better) Translates to: TAGLGSEKYSSTPSQ*IPVSPSRAEAGAPM Trigger: CATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGGTGTGGATGAGTATTTTTCTGACCCCAGCCCTGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 90 bp | ACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACACATaGTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: TILHVRQRLPHPSHT*SQRRDTAPQQGNRD Trigger: GTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 90 bp | CTTCAGATCTCATGCCAGGTGAGACCCAACGGTGCTGGCCAGCCCTaGCACACGATAGATAACCTAGCAATAAGTGTTCTGTCCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: LQISCQVRPNGAGQP*HTIDNLAISVLSTG Trigger: CCCTGTGGACAGAACACTTATTGCTAGGTTATCTATCGTGTGGCAGGGCTGGCCAGCACCGTTGGGTCTCACCTGGCATGAGATCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR TCA 90 bp | TGTCTGCAGCGTGGCAGGAAAGTCTCAGGCACTGAGGTTTGCTTCTaGGGAGAAATGATGGTGGCCTCCTGCCCAATAAACCACCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: CLQRGRKVSGTEVCF*GEMMVASCPINHPR Trigger: TCTTGGGTGGTTTATTGGGCAGGAGGCCACCATCATTTCTCCTCAGAAGCAAACCTCAGTGCCTGAGACTTTCCTGCCACGCTGCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR TCA 90 bp | GAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGGATaGCCCTGTCAATACCAAACCAAGCCCAATGGCTCCACAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: ERSLALLSTTANPSG*PCQYQTKPNGSTVP Trigger: TGGGACTGTGGAGCCATTGGGCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 90 bp | AGAAATGATGGTGGCCTCCTGCCCAATAAACCACCCAAGAGGGGCTaGACTGAAGGAGGAAGGAGCAGAGGTAAATCTCTCACTCCCATC | + |
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Preference number: 1 (lower is better) Translates to: RNDGGLLPNKPPKRG*TEGGRSRGKSLTPI Trigger: GATGGGAGTGAGAGATTTACCTCTGCTCCTTCCTCCTTCAGTGCAGCCCCTCTTGGGTGGTTTATTGGGCAGGAGGCCACCATCATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 90 bp | CTGTCACAACACAGCCACATAGGACCCTTAGGGACTGTTTCTATTTaGCTCACAGTGGTCAAATGGGCACCTTTTCTAGGCTTTCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: LSQHSHIGPLGTVSI*LTVVKWAPFLGFLN Trigger: GTTGAGAAAGCCTAGAAAAGGTGCCCATTTGACCACTGTGAGGCAAATAGAAACAGTCCCTAAGGGTCCTATGTGGCTGTGTTGTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCTGTCCAGACTTGAAGGGGCTGACTGCCAGGCAAGAGCCACCACTGCTCGTGTGGGGAGCTCTTaGGCAGGTCTGCTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PGLSRLEGADCQARATTARVGSS*AGLLCL Trigger: AAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACG...AGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCTGTCCAGACTTGAAGGGGCTGACTGCCAGGCAAGAGCCACCACTGCTGGAGAGATAGCTGGGTaGCAGCAGCACCCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PGLSRLEGADCQARATTAGEIAG*QQHPLC Trigger: ACAGAGAGGGTGCTGCTGTCACCCAGCTATCTCTCC...AGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCTGTCCAGACTTGAAGGGGCTGACTGCCAGGCAAGAGCCACCACTGCTGCTTCTGAGGAGAAATaGTGGTGGCCTCCTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PGLSRLEGADCQARATTAASEEK*WWPPAQ Trigger: TTGGGCAGGAGGCCACCATCATTTCTCCTCAGAAGC...AGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGGGTGAGACCCAACGGTaGTGGCCAGCCCTGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQGETQR*WPALPH Trigger: GTGTGGCAGGGCTGGCCAGCACCGTTGGGTCTCACC...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGTTCAGAGGGCTGGGCTaGCCCAGTCCCATGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QPHSKGTETARNIHPNTGFRGLG*PSPMQQ Trigger: CTGCTGCATGGGACTGGGCCAGCCCAGCCCTCTGAA...CCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGGTTCAGAGGGCTGGGCTaGCCCAGTCCCATGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SPTAREQRQPGTFIRTLGFRGLG*PSPMQQ Trigger: CTGCTGCATGGGACTGGGCCAGCCCAGCCCTCTGAA...CCCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCCAGCGTCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGGACTTTCCCAGGGTaGAGGACAGCTGACTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLQRLCCPAPAQHVMVLVWTFPG*RTADSA Trigger: AGCTGAGTCAGCTGTCCTTCACCCTGGGAAAGTCCA...CACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGACGCTGGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTTGGGCAGGTCTGCTCTaGCTTCCCAGGTGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPWAGLL*LPRWEA Trigger: AGCCTCCCACCTGGGAAGGCAGAGCAGACCTGCCCA...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCGCTCTTGGGCAGGTCTaGTCTGCCTTCCCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVLPSTCPACNGASVIGIALGQV*SAFPGG Trigger: CCCACCTGGGAAGGCAGAGCAGACCTGCCCAAGAGC...GATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACTGGGCAGGTCTGCTCTaGCTTCCCAGGTGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSTCPACNGASVIGIRNWAGLL*LPRWEA Trigger: AGCCTCCCACCTGGGAAGGCAGAGCAGACCTGCCCA...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGCGTGTGGGGAGCTCTTaGGCAGGTCTGCTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQRVGSS*AGLLCL Trigger: AAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACG...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCAGTGCATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGAGCACCCATGCACTGGGGGAGAAGGTaGGAAGGCAGAAAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PSQCIPVSPSRAEAGAPMHWGRR*EGRKQR Trigger: TCTTTGTTTTCTGCCTTCCCACCTTCTCCCCCAGTG...CATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACCTCTGCCTTCCCAGGTaGGAGGCTCTGTTCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: LPSTCPACNGASVIGIRNLCLPR*EALFNP Trigger: GGGGTTGAACAGAGCCTCCCACCTGGGAAGGCAGAG...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCCACTGTCTGCAGCGTaGCAGGAAAGTCTCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPPLSAA*QESLRH Trigger: GTGCCTGAGACTTTCCTGCCACGCTGCAGACAGTGG...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCCAGCAGTCCACAGCTaGCATGGACTTTCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPPAVHS*HGLSQG Trigger: ACCCTGGGAAAGTCCATGCCAGCTGTGGACTGCTGG...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCCACAGGGCCAGAGATaGAGAAGGGAACATTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPPQGQR*RREHWC Trigger: GCACCAATGTTCCCTTCTGCATCTCTGGCCCTGTGG...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCAGTGCATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGAGCACCCATGCTATTTGCCTCACAGTaGTCAAATGGGCACCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PSQCIPVSPSRAEAGAPMLFASQ*SNGHLF Trigger: GAAAAGGTGCCCATTTGACCACTGTGAGGCAAATAG...CATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACCCAGCAGTCCACAGCTaGCATGGACTTTCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LPSTCPACNGASVIGIRNPAVHS*HGLSQG Trigger: ACCCTGGGAAAGTCCATGCCAGCTGTGGACTGCTGG...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCACCTTTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACCTCTGCCTTCCCAGGTaGGAGGCTCTGTTCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: MGTFSRLSQLPHTVQEDHLCLPR*EALFNP Trigger: GGGGTTGAACAGAGCCTCCCACCTGGGAAGGCAGAG...GTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAAAGGTGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCTAGACCCATCTCTGAGCCTGAAGAGGACCATGGCAGCCACTGGGTTCGTAGACAAAGATGAATaGGGGACAAGCAGTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PGLDPSLSLKRTMAATGFVDKDE*GTSSGK Trigger: TTTGCCACTGCTTGTCCCCCATTCATCTTTGTCTAC...GAACCCAGTGGCTGCCATGGTCCTCTTCAGGCTCAGAGATGGGTCTAGCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGGGAGGAGAGATAGCTGGGTaGCAGCAGCACCCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: FLGFLNCHTLCKKTTVWGGEIAG*QQHPLC Trigger: ACAGAGAGGGTGCTGCTGTCACCCAGCTATCTCTCC...TCCCCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGATAACCTAGCAATAAGTGTTCTGTCCACAGGGCCAGAGATGCAGAAGGGAGCTCTTGGGCAGGTCTaGTCTGCCTTCCCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: IDNLAISVLSTGPEMQKGALGQV*SAFPGG Trigger: CCCACCTGGGAAGGCAGAGCAGACCTGCCCAAGAGC...TCCCTTCTGCATCTCTGGCCCTGTGGACAGAACACTTATTGCTAGGTTATCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCCAATTTCAGGTGATTaGCTGGACGTGTTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPPISGD*LDVFSP Trigger: GGGACTGAACACGTCCAGCCAATCACCTGAAATTGG...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGCACTGGGGGAGAAGGTaGGAAGGCAGAAAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQHWGRR*EGRKQR Trigger: TCTTTGTTTTCTGCCTTCCCACCTTCTCCCCCAGTG...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACGAAAGTCTCAGGCACTaGGGTTTGCTTCTGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPSTCPACNGASVIGIRNESLRH*GLLLRR Trigger: TCTCCTCAGAAGCAAACCTCAGTGCCTGAGACTTTC...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTAGGGACCTACTATACTaGATGTCAGACAAAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPRDLLY*MSDKGC Trigger: GCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCT...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGGGAAGGAGAGATAGCTaGGTGACAGCAGCACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLGRRDS*VTAAPS Trigger: AGAGGGTGCTGCTGTCACCCAGCTATCTCTCCTTCC...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCAATGGCTCCACAGTCCCAGGGCTTTAGCTTCAGATCTCATGCCAGGTGAGCTCACAGTGGTCAAATaGGCACCTTTTCTAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: AQWLHSPRALASDLMPGELTVVK*APFLGF Trigger: AAAGCCTAGAAAAGGTGCCCATTTGACCACTGTGAG...CTCACCTGGCATGAGATCTGAAGCTAAAGCCCTGGGACTGTGGAGCCATTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCAATGGCTCCACAGTCCCAGGGCTTTAGCTTCAGATCTCATGCCAGGTGAGCTATTTGCCTCACAGTaGTCAAATGGGCACCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: AQWLHSPRALASDLMPGELFASQ*SNGHLF Trigger: GAAAAGGTGCCCATTTGACCACTGTGAGGCAAATAG...CTCACCTGGCATGAGATCTGAAGCTAAAGCCCTGGGACTGTGGAGCCATTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCATCCATCTCTTACCTaGGTAAGGGCTGTCACAACA | + |
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Preference number: 2 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPHPSLT*VRAVTT Trigger: TGTTGTGACAGCCCTTACCCAGGTAAGAGATGGATG...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCAGCTTCTGAGGAGAAATaGTGGTGGCCTCCTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPASEEK*WWPPAQ Trigger: TTGGGCAGGAGGCCACCATCATTTCTCCTCAGAAGC...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACAGTCACAGACAGAAATaGCAGACTCAGGGACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LPSTCPACNGASVIGIRNSHRQK*QTQGPE Trigger: TTCTGGTCCCTGAGTCTGGCATTTCTGTCTGTGACT...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGTAAAGGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACTGTTTCAGGGCTGTaGGCTTCAGGCCTTATAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RQVKVRDLLYCMSDKGCHTVSGL*ASGLIG Trigger: CCCTATAAGGCCTGAAGCCCACAGCCCTGAAACAGT...GTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACCTTTACTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CCA 90 bp | ATAGATAACCTAGCAATAAGTGTTCTGTCCACAGGGCCAGAGATGCAGAAGGGAGAATACCAGGGCAGCTaGCCCCACTGTTTCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IDNLAISVLSTGPEMQKGEYQGS*PHCFRA Trigger: AGCCCTGAAACAGTGGGGCCAGCTGCCCTGGTATTC...TCCCTTCTGCATCTCTGGCCCTGTGGACAGAACACTTATTGCTAGGTTATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACCATCCATCTCTTACCTaGGTAAGGGCTGTCACAACA | + |
|
Preference number: 2 (lower is better) Translates to: LPSTCPACNGASVIGIRNHPSLT*VRAVTT Trigger: TGTTGTGACAGCCCTTACCCAGGTAAGAGATGGATG...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCTCTACCACTGCTAACCCCTCAGGATGACCCTGTCAATACCAAACCAAGCCTAGGCTTTCTCAACTaGCACACACTGTGCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: CSLPLLTPQDDPVNTKPSLGFLN*HTLCKK Trigger: CTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAG...GCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CCA 90 bp | ATAGATAACCTAGCAATAAGTGTTCTGTCCACAGGGCCAGAGATGCAGAAGGGACATTCATCCGAACACTaGGGGAGAAGGTGGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: IDNLAISVLSTGPEMQKGHSSEH*GRRWEG Trigger: GCCTTCCCACCTTCTCCCCCAGTGTTCGGATGAATG...TCCCTTCTGCATCTCTGGCCCTGTGGACAGAACACTTATTGCTAGGTTATCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CCA 90 bp | ATAGATAACCTAGCAATAAGTGTTCTGTCCACAGGGCCAGAGATGCAGAAGGGAACTGTTTCAGGGCTGTaGGCTTCAGGCCTTATAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IDNLAISVLSTGPEMQKGTVSGL*ASGLIG Trigger: CCCTATAAGGCCTGAAGCCCACAGCCCTGAAACAGT...TCCCTTCTGCATCTCTGGCCCTGTGGACAGAACACTTATTGCTAGGTTATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACCAATTTCAGGTGATTaGCTGGACGTGTTCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPPISGD*LDVFSP Trigger: GGGACTGAACACGTCCAGCCAATCACCTGAAATTGG...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | GTGAGGCGTGTGGGGAGCTCTTGGGCAGGTCTGCTCTaGCTTCCCAGGTGGGAGGCTCTGTTCAACCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VRRVGSSWAGLL*LPRWEALFNPS Trigger: GCTGGGGTTGAACAGAGCCTCCCACCTGGGAAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGCCTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | CAGTCCCTCCAACACGTGAGGCGTGTGGGGAGCTCTTaGGCAGGTCTGCTCTGCCTTCCCAGGTGGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSLQHVRRVGSS*AGLLCLPRWEA Trigger: AGCCTCCCACCTGGGAAGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGCCTCACGTGTTGGAGGGACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | TCAGGGCTGTGGGCTTCAGGCCTTATAGGGAACATGTaGCGCTCCAGACTTCAGAGGGCTGGGCTGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGLWASGLIGNM*RSRLQRAGLAQ Trigger: CTGGGCCAGCCCAGCCCTCTGAAGTCTGGAGCGCCACATGTTCCCTATAAGGCCTGAAGCCCACAGCCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | GGAGACGCTTCAGGGTATCTGGAATACCAGGGCAGCTaGCCCCACTGTTTCAGGGCTGTGGGCTTCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GDASGYLEYQGS*PHCFRAVGFRP Trigger: AGGCCTGAAGCCCACAGCCCTGAAACAGTGGGGCCAGCTGCCCTGGTATTCCAGATACCCTGAAGCGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | CATGTCAGACAAAGGCTGCCACACCCTAGCCACACATaGTCCCAAAGGAGGGACACAGCCCCACAGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HVRQRLPHPSHT*SQRRDTAPQQG Trigger: CCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCAGCCTTTGTCTGACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | AATACCAGGGCAGCTGGCCCCACTGTTTCAGGGCTGTaGGCTTCAGGCCTTATAGGGAACATGTGGCGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NTRAAGPTVSGL*ASGLIGNMWRS Trigger: GGAGCGCCACATGTTCCCTATAAGGCCTGAAGCCCACAGCCCTGAAACAGTGGGGCCAGCTGCCCTGGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | CCCATCTCTGAGCCTGAAGAGGACCATGGCAGCCACTaGGTTCACTTGGGTGGGTGTGCTCACAAGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PISEPEEDHGSH*VHLGGCAHKHL Trigger: GAGGTGCTTGTGAGCACACCCACCCAAGTGAACCCAGTGGCTGCCATGGTCCTCTTCAGGCTCAGAGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACGCGTGTGGGGAGCTCTaGGGCAGGTCTGCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPSTCPACNGASVIGIRNACGEL*GRSALP Trigger: AGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGC...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | CAGGCAAGAGCCACCACTGCTCTGATGAACCACCCATaGTACCAACTGCCACTGTCTGCAGCGTGGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QARATTALMNHP*YQLPLSAAWQE Trigger: TTCCTGCCACGCTGCAGACAGTGGCAGTTGGTAGCATGGGTGGTTCATCAGAGCAGTGGTGGCTCTTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | AGAACTCCAGGGCTGTCCAGACTTGAAGGGGCTGACTaGCAGGCAAGAGCCACCACTGCTCTGATGAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: RTPGLSRLEGAD*QARATTALMNH Trigger: GTGGTTCATCAGAGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGGAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | GACAAGCAGTGGCAAACAGGTCTCCAGCGTCTGTGCTaGCCAGCACCTGCCCAGCATGTAATGGTGCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DKQWQTGLQRLC*PAPAQHVMVLV Trigger: CACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGACGCTGGAGACCTGTTTGCCACTGCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR TCA 72 bp | CCCAGCAGTCCACAGCTGGCATGGACTTTCCCAGGGTaGAGGACAGCTGACTCAGCTCTCATTAAGGCAACG | + |
|
Preference number: 3 (lower is better) Translates to: PSSPQLAWTFPG*RTADSALIKAT Trigger: CGTTGCCTTAATGAGAGCTGAGTCAGCTGTCCTTCACCCTGGGAAAGTCCATGCCAGCTGTGGACTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | GGTGGCCTCCTGCCCAATAAACCACCCAAGAGGGGCTaGACTGAAGGAGGAAGGAGCAGAGGTAAATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGLLPNKPPKRG*TEGGRSRGKSL Trigger: GAGAGATTTACCTCTGCTCCTTCCTCCTTCAGTGCAGCCCCTCTTGGGTGGTTTATTGGGCAGGAGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | CTCTTCAAGATCTGCACGGAGACGCTTCAGGGTATCTaGAATACCAGGGCAGCTGGCCCCACTGTTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFKICTETLQGI*NTRAAGPTVSG Trigger: CCCTGAAACAGTGGGGCCAGCTGCCCTGGTATTCCAGATACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCAGCGTGTGGGGAGCTCTaGGGCAGGTCTGCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPACGEL*GRSALP Trigger: AGGCAGAGCAGACCTGCCCAAGAGCTCCCCACACGC...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCCAGTGCATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGAGCACCCATGCCTGGGTGGGAATTATaGATAACTGCTGATTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSQCIPVSPSRAEAGAPMPGWEL*ITADFR Trigger: CCTGAAATCAGCAGTTATCAATAATTCCCACCCAGG...CATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR TCA 72 bp | AAAAATACTCATCCACACCCAGCCAGTGCATACCTGTaGGCCCAAGCAGAGCAGAAGCGGGAGCACCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: KNTHPHPASAYL*AQAEQKREHPC Trigger: GCATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGGTGTGGATGAGTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | CTACTGCTGGCAGGTAGCTGGAGAGATCACTTGCCTTaGTCTCTACCACTGCTAACCCCTCAGGATGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLAGSWRDHLP*SLPLLTPQDDP Trigger: AGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAGCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 72 bp | CTGGGGTCAGAAAAATACTCATCCACACCCAGCCAGTaGATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSEKYSSTPSQ*IPVSPSRAEAG Trigger: TCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGGTGTGGATGAGTATTTTTCTGACCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR GCA 72 bp | TCATGCCAGGTGAGACCCAACGGTGCTGGCCAGCCCTaGCACACGATAGATAACCTAGCAATAAGTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SCQVRPNGAGQP*HTIDNLAISVL Trigger: CAGAACACTTATTGCTAGGTTATCTATCGTGTGGCAGGGCTGGCCAGCACCGTTGGGTCTCACCTGGCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACAGCTGGAGAGATCACTaGCCTTGCTCTCTACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LPSTCPACNGASVIGIRNSWRDH*PCSLPL Trigger: CAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCT...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR CCA 72 bp | CTCAGGATGACCCTGTCAATACCAAACCAAGCCCAATaGCTCCACAGTCCCAGGGCTTTAGCTTCAGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRMTLSIPNQAQ*LHSPRALASDL Trigger: GAGATCTGAAGCTAAAGCCCTGGGACTGTGGAGCCATTGGGCTTGGTTTGGTATTGACAGGGTCATCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR TCA 72 bp | AGATGCAGAAGGGAACATTGGTGCATTCTACTAAGGTaGCAAACATGGCTCCCAGCAGTCCACAGCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RCRREHWCILLR*QTWLPAVHSWH Trigger: ATGCCAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTTCTGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR GCA 72 bp | CACAGCCACATAGGACCCTTAGGGACTGTTTCTATTTaGCTCACAGTGGTCAAATGGGCACCTTTTCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HSHIGPLGTVSI*LTVVKWAPFLG Trigger: GCCTAGAAAAGGTGCCCATTTGACCACTGTGAGGCAAATAGAAACAGTCCCTAAGGGTCCTATGTGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACCTGGGTGGGAATTATaGATAACTGCTGATTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPPGWEL*ITADFR Trigger: CCTGAAATCAGCAGTTATCAATAATTCCCACCCAGG...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| 3UTR CCA 72 bp | TTAGGGACTGTTTCTATTTGCCTCACAGTGGTCAAATaGGCACCTTTTCTAGGCTTTCTCAACTGCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: LGTVSICLTVVK*APFLGFLNCHT Trigger: TGTGTGGCAGTTGAGAAAGCCTAGAAAAGGTGCCCATTTGACCACTGTGAGGCAAATAGAAACAGTCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS-3UTR GCA 90 bp | CAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGAGGTCCGGGGGAGGCTaGACATCTCGCAGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPHSKGTETARNIHPNTGRSGGG*TSRSGL Trigger: CAGGCCACTGCGAGATGTGCAGCCTCCCCCGGACCT...CCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTAGGTCCGGGGGAGGCTaGACATCTCGCAGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPRSGGG*TSRSGL Trigger: CAGGCCACTGCGAGATGTGCAGCCTCCCCCGGACCT...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACGACGGGCCAGCTGGGTaGTCTCATTGCCAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: APKGGTQPHSKGTETARNDGPAG*SHCQTC Trigger: ACAAGTTTGGCAATGAGATCACCCAGCTGGCCCGTC...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CTTCCCAGGTGGGAGGCTCTGTTCAACCCCAGCACAGCAGCCGAGGTTCTTTCTATGAAGGTGCAGTGCTaGCAGGCCCACATGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPRWEALFNPSTAAEVLSMKVQC*QAHMAE Trigger: CTCTGCCATGTGGGCCTGTCAGCACTGCACCTTCAT...AGAAAGAACCTCGGCTGCTGTGCTGGGGTTGAACAGAGCCTCCCACCTGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAGGTGGGAGGCTCTGTTCAACCCCAGCACAGCAGCCGAGGTTCTTTCTACTGCACCAAACTCGTaGAGGCCTGGGAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPRWEALFNPSTAAEVLSTAPNS*RPGSCT Trigger: TGTGCAGCTCCCAGGCCTCCACGAGTTTGGTGCAGT...AGAAAGAACCTCGGCTGCTGTGCTGGGGTTGAACAGAGCCTCCCACCTGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACTGGCCTGTGCCAGGTTaGTTCATGAAGGTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: APKGGTQPHSKGTETARNWPVPG*FMKVQC Trigger: GCACTGCACCTTCATGAACCAACCTGGCACAGGCCA...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCTAGACCCATCTCTGAGCCTGAAGAGGACCATGGCAGCCACTGGGTTCGCATGGAAGGACATGTaGTTCACAGGAGGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLDPSLSLKRTMAATGFAWKDM*FTGGSK Trigger: CTTGGAGCCTCCTGTGAAGCACATGTCCTTCCATGC...GAACCCAGTGGCTGCCATGGTCCTCTTCAGGCTCAGAGATGGGTCTAGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCTGTCCAGACTTGAAGGGGCTGACTGCCAGGCAAGAGCCACCACTGCTAGGAGGCTCGTAAATTaGAGCCACTTCAGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLSRLEGADCQARATTARRLVN*SHFSPD Trigger: ATCAGGGCTGAAGTGGCTGCAATTTACGAGCCTCCT...AGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTTGGAGGCCTGGGAGCTaGACACCAACGGTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQQPRFFLFKICTETLQGWRPGS*TPTVLH Trigger: ATGCAGCACCGTTGGTGTGCAGCTCCCAGGCCTCCA...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACCCTTTTTCAGGAAGGTaGCAGCCGTCTCTCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: APKGGTQPHSKGTETARNPFSGR*QPSLSS Trigger: CGAAGAGAGAGACGGCTGCCACCTTCCTGAAAAAGG...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | AGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGGACTGCACCAAACTCGTaGAGGCCTGGGAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPTAREQRQPGTFIRTLGTAPNS*RPGSCT Trigger: TGTGCAGCTCCCAGGCCTCCACGAGTTTGGTGCAGT...CCCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGTGGTACCCTTCAAAGTaGACCTGGTTGTCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CHTLATHAPKGGTQPHSKWYPSK*TWLSGP Trigger: TGGTCCTGACAACCAGGTTCACTTTGAAGGGTACCA...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | AGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGGGACGGGCCAGCTGGGTaGTCTCATTGCCAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPTAREQRQPGTFIRTLGDGPAG*SHCQTC Trigger: ACAAGTTTGGCAATGAGATCACCCAGCTGGCCCGTC...CCCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTATGAAGGTGCAGTGCTaGCAGGCCCACATGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQQPRFFLFKICTETLQGMKVQC*QAHMAE Trigger: CTCTGCCATGTGGGCCTGTCAGCACTGCACCTTCAT...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGTGCCAGGTTGGTTCATaGAGGTGCAGTGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPHSKGTETARNIHPNTGCQVGS*RCSADR Trigger: CCTGTCAGCACTGCACCTTCATGAACCAACCTGGCA...CCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACTGGAGGCCTGGGAGCTaGACACCAACGGTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSTCPACNGASVIGIRNWRPGS*TPTVLH Trigger: ATGCAGCACCGTTGGTGTGCAGCTCCCAGGCCTCCA...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAGGTGGGAGGCTCTGTTCAACCCCAGCACAGCAGCCGAGGTTCTTTCTCACTGGGCTGGCATTTaGTGCAGATACCATTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRWEALFNPSTAAEVLSHWAGI*CRYHLA Trigger: GGCCAAATGGTATCTGCACCAAATGCCAGCCCAGTG...AGAAAGAACCTCGGCTGCTGTGCTGGGGTTGAACAGAGCCTCCCACCTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACAAACTCGTGGAGGCCTaGGAGCTGCACACCAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHKLVEA*ELHTNG Trigger: ACCGTTGGTGTGCAGCTCCCAGGCCTCCACGAGTTT...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACTCTGTCTGTTCAGCGTaGTGGCACTGGGCTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHSVCSA*WHWAGI Trigger: AATGCCAGCCCAGTGCCATCACGCTGAACAGACAGA...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTTCTGTCTGTTCAGCGTaGTGGCACTGGGCTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: AQQPRFFLFKICTETLQGSVCSA*WHWAGI Trigger: AATGCCAGCCCAGTGCCATCACGCTGAACAGACAGA...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCTGTCCAGACTTGAAGGGGCTGACTGCCAGGCAAGAGCCACCACTGCTGAAAGTCTCCTGCAGTaGTGCATTCTTCTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLSRLEGADCQARATTAESLLQ*CILLNS Trigger: TGAGTTCAGAAGAATGCATCACTGCAGGAGACTTTC...AGCAGTGGTGGCTCTTGCCTGGCAGTCAGCCCCTTCAAGTCTGGACAGCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACTTGGGGTGCTTGTTTTaGAAGTCTCCTGCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: APKGGTQPHSKGTETARNLGCLF*KSPAVM Trigger: CATCACTGCAGGAGACTTTCAAAACAAGCACCCCAA...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACCACAATGCACACACTTaGCCAAGGGACCATGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSTCPACNGASVIGIRNHNAHT*PRDHGG Trigger: GCCGCCATGGTCCCTTGGGCAAGTGTGTGCATTGTG...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | AGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGGCACTGGGCTGGCATTTaGTGCAGATACCATTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPTAREQRQPGTFIRTLGHWAGI*CRYHLA Trigger: GGCCAAATGGTATCTGCACCAAATGCCAGCCCAGTG...CCCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | AGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGGTCCTCAGGCCAAGTTTaGCGGCAATCTCGTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPTAREQRQPGTFIRTLGSSGQV*RQSRQP Trigger: TGGTTGACGAGATTGCCGCCAAACTTGGCCTGAGGA...CCCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCAGTGCATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGAGCACCCATGACAAATCGCCATGCTTaGTTTTTAGCAAATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQCIPVSPSRAEAGAPMTNRHA*FLANGG Trigger: CCCTCCATTTGCTAAAAATCAAGCATGGCGATTTGT...CATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCGGGTCCAGCAAGGCTTaGGGGAAACAGGAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLPSTCPACNGASVIGIGSSKA*GKQEQQ Trigger: TTGTTGTTCCTGTTTCCCTCAAGCCTTGCTGGACCC...GATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGCAGCCACTTCAGCCCTaGTGCCGAGGGGAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLQPLQP*CRGECP Trigger: AGGACATTCCCCTCGGCATCAGGGCTGAAGTGGCTG...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGATCCAAGAACACGGATaGGGTATTCTGGGACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CHTLATHAPKGGTQPHSKIQEHG*GILGQV Trigger: TACTTGTCCCAGAATACCTCATCCGTGTTCTTGGAT...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGAGGAGGCTCGTAAATTaGAGCCACTTCAGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPHSKGTETARNIHPNTGRRLVN*SHFSPD Trigger: ATCAGGGCTGAAGTGGCTGCAATTTACGAGCCTCCT...CCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCAGCGTCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGGAGAAGCCGTTGTTTTaGAAGCCAAACTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQRLCCPAPAQHVMVLVEKPLF*KPNSFA Trigger: TGCAAAGGAGTTTGGCTTCCAAAACAACGGCTTCTC...CACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGACGCTGGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGATAGTCCTCATCAAATaGCTCCAGTGGGACACAATG | + |
|
Preference number: 4 (lower is better) Translates to: CHTLATHAPKGGTQPHSKIVLIK*LQWDTM Trigger: CATTGTGTCCCACTGGAGCCATTTGATGAGGACTAT...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACTCCTCAGGCCAAGTTTaGCGGCAATCTCGTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHSSGQV*RQSRQP Trigger: TGGTTGACGAGATTGCCGCCAAACTTGGCCTGAGGA...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GCCCAATGGCTCCACAGTCCCAGGGCTTTAGCTTCAGATCTCATGCCAGGTGAGCTAGCTCCTCATTTCTaGTCCTCACGGCTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLHSPRALASDLMPGELAPHF*SSRLLA Trigger: TGCTAGAAGCCGTGAGGACCAGAAATGAGGAGCTAG...CTCACCTGGCATGAGATCTGAAGCTAAAGCCCTGGGACTGTGGAGCCATTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTACCACTGCTAACCCCTCAGGATGACCCTGTCAATACCAAACCAAGCAAACTCGTGGAGGCCTaGGAGCTGCACACCAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLPLLTPQDDPVNTKPSKLVEA*ELHTNG Trigger: ACCGTTGGTGTGCAGCTCCCAGGCCTCCACGAGTTT...GCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACCGGTCAGCAACAGTATaGTTCTCAAACATGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: APKGGTQPHSKGTETARNRSATV*FSNMML Trigger: CAACATCATGTTTGAGAATCATACTGTTGCTGACCG...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTCTGAGACAAGGTCCGTaGATATCCATCCAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQQPRFFLFKICTETLQGLRQGP*ISIQPS Trigger: GGAAGGTTGGATGGATATTCACGGACCTTGTCTCAG...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCTAGACCCATCTCTGAGCCTGAAGAGGACCATGGCAGCCACTGGGTTCAGTGATGCATTCTTCTaGACTCAGGAAATAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLDPSLSLKRTMAATGFSDAFF*TQEIGV Trigger: GACACCTATTTCCTGAGTTCAGAAGAATGCATCACT...GAACCCAGTGGCTGCCATGGTCCTCTTCAGGCTCAGAGATGGGTCTAGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACAACTTGGATCCAAAATaGCCATCGGGAGAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSTCPACNGASVIGIRNNLDPK*PSGESR Trigger: CCGGCTCTCTCCCGATGGTCATTTTGGATCCAAGTT...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCACTAGTGCCATGCACTaGTTGGATACCTGGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPSTCPACNGASVIGITSAMH*LDTWYP Trigger: AGGGTACCAGGTATCCAATCAGTGCATGGCACTAGT...GATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | TCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCTGGGCTGGCATTTGGTaGAGATACCATTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVLPSTCPACNGASVIGIWAGIW*RYHLAM Trigger: CATGGCCAAATGGTATCTGCACCAAATGCCAGCCCA...GATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | TCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGGGGAATGTCCTTGTaGTCTGTGTACCGTCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPSTCPACNGASVIGIRGMSL*SVYRPY Trigger: ATACGGACGGTACACAGAGCACAAGGACATTCCCCT...GATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGAGGGGAATGTCCTTGTaGTCTGTGTACCGTCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQRGMSL*SVYRPY Trigger: ATACGGACGGTACACAGAGCACAAGGACATTCCCCT...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS-3UTR CCA 90 bp | AGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGGGTGCCATGCACTGATTaGATACCTGGTACCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPTAREQRQPGTFIRTLGVPCTD*IPGTLQ Trigger: TTGAAGGGTACCAGGTATCCAATCAGTGCATGGCAC...CCCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGCTAGCTCCTCATTTCTaGTCCTCACGGCTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQLAPHF*SSRLLA Trigger: TGCTAGAAGCCGTGAGGACCAGAAATGAGGAGCTAG...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACCAGTCTTGTTTCTATTaGTGTAAACTGAGAAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: APKGGTQPHSKGTETARNQSCFY*CKLRSR Trigger: ACGGCTTCTCAGTTTACATCAATAGAAACAAGACTG...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTACCACTGCTAACCCCTCAGGATGACCCTGTCAATACCAAACCAAGCGGGTCCAGCAAGGCTTaGGGGAAACAGGAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLPLLTPQDDPVNTKPSGSSKA*GKQEQQ Trigger: TTGTTGTTCCTGTTTCCCTCAAGCCTTGCTGGACCC...GCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTTTGGGGTGCTTGTTTTaGAAGTCTCCTGCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AQQPRFFLFKICTETLQGLGCLF*KSPAVM Trigger: CATCACTGCAGGAGACTTTCAAAACAAGCACCCCAA...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | GCCCAATGGCTCCACAGTCCCAGGGCTTTAGCTTCAGATCTCATGCCAGGTGAGGGATTTGCTGGACGATaGTGTTATCTCTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQWLHSPRALASDLMPGEGFAGR*CYLSSL Trigger: AAGACTGGAGAGATAACAGCATCGTCCAGCAAATCC...CTCACCTGGCATGAGATCTGAAGCTAAAGCCCTGGGACTGTGGAGCCATTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTACCACTGCTAACCCCTCAGGATGACCCTGTCAATACCAAACCAAGCGTGATGGCACTGGGCTaGCATTTGGTGCAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLPLLTPQDDPVNTKPSVMALG*HLVQIP Trigger: TGGTATCTGCACCAAATGCCAGCCCAGTGCCATCAC...GCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACTGCATAACTGCTCAATaGTGGCCCACTGTTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHCITAQ*WPTVQT Trigger: AGTCTGAACAGTGGGCCACCATTGAGCAGTTATGCA...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCTGCATAACTGCTCAATaGTGGCCCACTGTTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPSTCPACNGASVIGICITAQ*WPTVQT Trigger: AGTCTGAACAGTGGGCCACCATTGAGCAGTTATGCA...GATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | ATGGGCACCTTTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACTGGCCTGTGCCAGGTTaGTTCATGAAGGTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MGTFSRLSQLPHTVQEDHWPVPG*FMKVQC Trigger: GCACTGCACCTTCATGAACCAACCTGGCACAGGCCA...GTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAAAGGTGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGTCTATTGATGTAAACTaGGAAGCCGTTGTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHTLATHAPKGGTQPHSKSIDVN*EAVVLE Trigger: TTCCAAAACAACGGCTTCTCAGTTTACATCAATAGA...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGAACTTGGATCCAAAATaGCCATCGGGAGAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLNLDPK*PSGESR Trigger: CCGGCTCTCTCCCGATGGTCATTTTGGATCCAAGTT...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACATCCAAGAACACGGATaGGGTATTCTGGGACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHIQEHG*GILGQV Trigger: TACTTGTCCCAGAATACCTCATCCGTGTTCTTGGAT...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCATGCCAGGTTGGTTCATaGAGGTGCAGTGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPCQVGS*RCSADR Trigger: CCTGTCAGCACTGCACCTTCATGAACCAACCTGGCA...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGGCATGGAAGGACATGTaGTTCACAGGAGGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLAWKDM*FTGGSK Trigger: CTTGGAGCCTCCTGTGAAGCACATGTCCTTCCATGC...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGGGACCTTTTTCAGGAAGGTaGCAGCCGTCTCTCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLGFLNCHTLCKKTTVWGPFSGR*QPSLSS Trigger: CGAAGAGAGAGACGGCTGCCACCTTCCTGAAAAAGG...TCCCCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTAATGGAGGGATTTGCTaGACGATGCTGTTATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPNGGIC*TMLLSL Trigger: GAGAGATAACAGCATCGTCCAGCAAATCCCTCCATT...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGTTGATTTTTAGCAAATaGAGGGATTTGCTGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHTLATHAPKGGTQPHSKLIFSK*RDLLDD Trigger: ATCGTCCAGCAAATCCCTCCATTTGCTAAAAATCAA...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTATAGTCCTCATCAAATaGCTCCAGTGGGACACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPIVLIK*LQWDTM Trigger: CATTGTGTCCCACTGGAGCCATTTGATGAGGACTAT...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGTAAAGGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACGTGATGGCACTGGGCTaGCATTTGGTGCAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: RQVKVRDLLYCMSDKGCHVMALG*HLVQIP Trigger: TGGTATCTGCACCAAATGCCAGCCCAGTGCCATCAC...GTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACCTTTACTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACAAGTACCCAAAATGCTaGTTTCCGGTCTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHKYPKC*FPVFLQ Trigger: CTGGAGAAAGACCGGAAACCAGCATTTTGGGTACTT...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACGATGGAAGTCGGAAATaGTATCCAAGAACACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHDGSRK*YPRTRM Trigger: CATCCGTGTTCTTGGATACCATTTCCGACTTCCATC...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACTCTGGGACAAGTAGGTaGCCAAACTATGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQGPTILHVRQRLPHPSHSGTSR*PNYGSH Trigger: ATGACTTCCATAGTTTGGCCACCTACTTGTCCCAGA...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103017.4 |
||
| 3UTR CAA 72 bp | GTTCTGTCCACAGGGCCAGAGATGCAGAAGGGAACATaGGTGCATTCTACTAAGGTGACAAACATGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSTGPEMQKGT*VHSTKVTNMAP Trigger: GGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTTCTGCATCTCTGGCCCTGTGGACAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGTATGATTCTCAAACATaGTGTTGTCCACGTGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQYDSQT*CCPRVG Trigger: ACCGACACGTGGACAACATCATGTTTGAGAATCATA...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTTATGATTCTCAAACATaGTGTTGTCCACGTGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPYDSQT*CCPRVG Trigger: ACCGACACGTGGACAACATCATGTTTGAGAATCATA...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTCGGTCAGCAACAGTATaGTTCTCAAACATGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQPRFFLFKICTETLQGRSATV*FSNMML Trigger: CAACATCATGTTTGAGAATCATACTGTTGCTGACCG...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGGGACTGAGACAAGGTCCGTaGATATCCATCCAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLGFLNCHTLCKKTTVWGLRQGP*ISIQPS Trigger: GGAAGGTTGGATGGATATTCACGGACCTTGTCTCAG...TCCCCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGACTAGTGCCATGCACTaGTTGGATACCTGGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLGFLNCHTLCKKTTVWTSAMH*LDTWYP Trigger: AGGGTACCAGGTATCCAATCAGTGCATGGCACTAGT...CCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGTGATTGGCATCAGAAACGGATTTGCTGGACGATaGTGTTATCTCTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSTCPACNGASVIGIRNGFAGR*CYLSSL Trigger: AAGACTGGAGAGATAACAGCATCGTCCAGCAAATCC...GTTTCTGATGCCAATCACACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGGGATGGGCTGGCATTTGGTaGAGATACCATTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLGFLNCHTLCKKTTVWGWAGIW*RYHLAM Trigger: CATGGCCAAATGGTATCTGCACCAAATGCCAGCCCA...TCCCCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGTATAAGTACCCAAAATaGTGGTTTCCGGTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPHSKGTETARNIHPNTGYKYPK*WFPVFL Trigger: GAGAAAGACCGGAAACCAGCATTTTGGGTACTTATA...CCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTACCACTGCTAACCCCTCAGGATGACCCTGTCAATACCAAACCAAGCGTGCCATGCACTGATTaGATACCTGGTACCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLPLLTPQDDPVNTKPSVPCTD*IPGTLQ Trigger: TTGAAGGGTACCAGGTATCCAATCAGTGCATGGCAC...GCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | GCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTCAGCAGTCTTGTTTCTATTaGTGTAAACTGAGAAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSWRDHLPCSLPLLTPQQSCFY*CKLRSR Trigger: ACGGCTTCTCAGTTTACATCAATAGAAACAAGACTG...CTGAGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | GCCCAATGGCTCCACAGTCCCAGGGCTTTAGCTTCAGATCTCATGCCAGGTGAGTTGATTTTTAGCAAATaGAGGGATTTGCTGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQWLHSPRALASDLMPGELIFSK*RDLLDD Trigger: ATCGTCCAGCAAATCCCTCCATTTGCTAAAAATCAA...CTCACCTGGCATGAGATCTGAAGCTAAAGCCCTGGGACTGTGGAGCCATTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGTCTGGGACAAGTAGGTaGCCAAACTATGGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLSGTSR*PNYGSP Trigger: AGGACTTCCATAGTTTGGCCACCTACTTGTCCCAGA...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044271.15 |
||
| 3UTR CAA 72 bp | ACACAGCCACATAGGACCCTTAGGGACTGTTTCTATTaGCCTCACAGTGGTCAAATGGGCACCTTTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQPHRTLRDCFY*PHSGQMGTFSR Trigger: CCTAGAAAAGGTGCCCATTTGACCACTGTGAGGCAAATAGAAACAGTCCCTAAGGGTCCTATGTGGCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGTAAAGGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACAAGTACCCAAAATGCTaGTTTCCGGTCTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQVKVRDLLYCMSDKGCHKYPKC*FPVFLQ Trigger: CTGGAGAAAGACCGGAAACCAGCATTTTGGGTACTT...GTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACCTTTACTTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | ATGGGCACCTTTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACGATGGAAGTCGGAAATaGTATCCAAGAACACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MGTFSRLSQLPHTVQEDHDGSRK*YPRTRM Trigger: CATCCGTGTTCTTGGATACCATTTCCGACTTCCATC...GTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAAAGGTGCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGTAAAGGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACAGTGATGCATTCTTCTaGACTCAGGAAATAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQVKVRDLLYCMSDKGCHSDAFF*TQEIGV Trigger: GACACCTATTTCCTGAGTTCAGAAGAATGCATCACT...GTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACCTTTACTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCAGAAAGTCTCCTGCAGTaGTGCATTCTTCTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPESLLQ*CILLNS Trigger: TGAGTTCAGAAGAATGCATCACTGCAGGAGACTTTC...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGGAAGCCAAACTCCTTTaGAACCTTTTTCAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLEAKLL*NLFQEG Trigger: ACCTTCCTGAAAAAGGTTGCAAAGGAGTTTGGCTTC...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | CCTTTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGGAAGCCAAACTCCTTTaGAACCTTTTTCAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLGFLNCHTLCKKTTVWEAKLL*NLFQEG Trigger: ACCTTCCTGAAAAAGGTTGCAAAGGAGTTTGGCTTC...CCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCAGAGAAGCCGTTGTTTTaGAAGCCAAACTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTLVHSTKVTNMAPSSPEKPLF*KPNSFA Trigger: TGCAAAGGAGTTTGGCTTCCAAAACAACGGCTTCTC...TGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGTTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGTAAAGGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACTATAAGTACCCAAAATaGTGGTTTCCGGTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQVKVRDLLYCMSDKGCHYKYPK*WFPVFL Trigger: GAGAAAGACCGGAAACCAGCATTTTGGGTACTTATA...GTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACCTTTACTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR TCA 90 bp | TTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACAGTGTGGGGATCTATTGATGTAAACTaGGAAGCCGTTGTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLGFLNCHTLCKKTTVWGSIDVN*EAVVLE Trigger: TTCCAAAACAACGGCTTCTCAGTTTACATCAATAGA...TCCCCACACTGTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 90 bp | GAAGGTGCAGTGCTGACAGGCCCACATGGCAGAGGTAGCAGCGCGTaGAGAGCCCCCGACTGCACCAAACTCGTGGAGGCCTGGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGAVLTGPHGRGSSA*RAPDCTKLVEAWEL Trigger: CAGCTCCCAGGCCTCCACGAGTTTGGTGCAGTCGGGGGCTCTGCACGCGCTGCTACCTCTGCCATGTGGGCCTGTCAGCACTGCACCTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | ATCTCGCAGTGGCCTGTGCCAGGTTGGTTCATGAAGGTGCAGTGCTaGCAGGCCCACATGGCAGAGGTAGCAGCGCGTGCAGAGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ISQWPVPGWFMKVQC*QAHMAEVAARAEPP Trigger: CGGGGGCTCTGCACGCGCTGCTACCTCTGCCATGTGGGCCTGTCAGCACTGCACCTTCATGAACCAACCTGGCACAGGCCACTGCGAGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | GCAGAGGTAGCAGCGCGTGCAGAGCCCCCGACTGCACCAAACTCGTaGAGGCCTGGGAGCTGCACACCAACGGTGCTGCATAACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AEVAARAEPPTAPNS*RPGSCTPTVLHNCS Trigger: TGAGCAGTTATGCAGCACCGTTGGTGTGCAGCTCCCAGGCCTCCACGAGTTTGGTGCAGTCGGGGGCTCTGCACGCGCTGCTACCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGTGGCCTGTGCCAGGTaGGTTCATGAAGGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CHTLATHAPKGGTQPHSKVACAR*VHEGAV Trigger: CACTGCACCTTCATGAACCAACCTGGCACAGGCCAC...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGCTGGCCCCACTGTTTCAGGGCTGTGGGCTTCAGGCCTTATAGGGAACGCAACAAACTTACCCTaGTCAGCCCCTCCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAAGPTVSGLWASGLIGNATNLP*SAPPVS Trigger: GCTGACTGGAGGGGCTGACAAGGGTAAGTTTGTTGC...GTTCCCTATAAGGCCTGAAGCCCACAGCCCTGAAACAGTGGGGCCAGCTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACATTCATCCGAACACTGGGCCGAGGGGAATGTCCTaGTGCTCTGTGTACCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QPHSKGTETARNIHPNTGPRGMS*CSVYRP Trigger: CGGACGGTACACAGAGCACAAGGACATTCCCCTCGG...CCCAGTGTTCGGATGAATGTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACTTCCTCAGGCCAAGTTaGGCGGCAATCTCGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: APKGGTQPHSKGTETARNFLRPS*AAISST Trigger: GGTTGACGAGATTGCCGCCAAACTTGGCCTGAGGAA...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | TGCCACACCCTAGCCACACATGCTCCCAAAGGAGGGACACAGCCCCACAGCAAGCACCCTGACTTAATCTaGCAGCTGATGTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHTLATHAPKGGTQPHSKHPDLI*QLMFSR Trigger: CCTGGAGAACATCAGCTGCAAGATTAAGTCAGGGTG...CTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGCATGTGTGGCTAGGGTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCTAGACCCATCTCTGAGCCTGAAGAGGACCATGGCAGCCACTGGGTTCCACCCTGACTTAATCTaGCAGCTGATGTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLDPSLSLKRTMAATGFHPDLI*QLMFSR Trigger: CCTGGAGAACATCAGCTGCAAGATTAAGTCAGGGTG...GAACCCAGTGGCTGCCATGGTCCTCTTCAGGCTCAGAGATGGGTCTAGCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | GGAGGCCTGGGAGCTGCACACCAACGGTGCTGCATAACTGCTCAATaGTGGCCCACTGTTCAGACTTTTTCCATGTCTGTGCTAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGLGAAHQRCCITAQ*WPTVQTFSMSVLAP Trigger: AGGAGCTAGCACAGACATGGAAAAAGTCTGAACAGTGGGCCACCATTGAGCAGTTATGCAGCACCGTTGGTGTGCAGCTCCCAGGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | GGTCTCCAGCGTCTGTGCTGCCCAGCACCTGCCCAGCATGTAATGGTGCTAGTGGGAAGCCAAACTCCTTaGCAACCTTTTTCAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQRLCCPAPAQHVMVLVGSQTP*QPFSGR Trigger: CCTTCCTGAAAAAGGTTGCAAAGGAGTTTGGCTTCC...CACTAGCACCATTACATGCTGGGCAGGTGCTGGGCAGCACAGACGCTGGAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGCTGGCCCCACTGTTTCAGGGCTGTGGGCTTCAGGCCTTATAGGGAACGGAAGCCAAACTCCTTaGCAACCTTTTTCAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAAGPTVSGLWASGLIGNGSQTP*QPFSGR Trigger: CCTTCCTGAAAAAGGTTGCAAAGGAGTTTGGCTTCC...GTTCCCTATAAGGCCTGAAGCCCACAGCCCTGAAACAGTGGGGCCAGCTGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCAGTGCATACCTGTGAGCCCAAGCAGAGCAGAAGCGGGAGCACCCATGCTGCTTGCTGAGGTATaGATCGATCTCATCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSQCIPVSPSRAEAGAPMLLAEV*IDLIFN Trigger: GTTGAAGATGAGATCGATCAATACCTCAGCAAGCAG...CATGGGTGCTCCCGCTTCTGCTCTGCTTGGGCTCACAGGTATGCACTGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | GGTCAGGGACCTACTATACTGCATGTCAGACAAAGGCTGCCACACCCTAGCCACTTCCTCAGGCCAAGTTaGGCGGCAATCTCGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: GQGPTILHVRQRLPHPSHFLRPS*AAISST Trigger: GGTTGACGAGATTGCCGCCAAACTTGGCCTGAGGAA...GTGGCTAGGGTGTGGCAGCCTTTGTCTGACATGCAGTATAGTAGGTCCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | GCTCCCAAAGGAGGGACACAGCCCCACAGCAAGGGAACAGAGACAGCCAGGAACGTTGGGGTGCTTGTTTaGAAAGTCTCCTGCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: APKGGTQPHSKGTETARNVGVLV*KVSCSD Trigger: ATCACTGCAGGAGACTTTCAAAACAAGCACCCCAAC...GTTCCTGGCTGTCTCTGTTCCCTTGCTGTGGGGCTGTGTCCCTCCTTTGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | TCCACGTGTCGGTATTTCTGTCTGTTCAGCGTGATGGCACTGGGCTaGCATTTGGTGCAGATACCATTTGGCCATGGGAGGTGTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STCRYFCLFSVMALG*HLVQIPFGHGRCPS Trigger: TGAGGGACACCTCCCATGGCCAAATGGTATCTGCACCAAATGCCAGCCCAGTGCCATCACGCTGAACAGACAGAAATACCGACACGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | GGCCTGGGAGCTGCACACCAACGGTGCTGCATAACTGCTCAATGGTaGCCCACTGTTCAGACTTTTTCCATGTCTGTGCTAGCTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLGAAHQRCCITAQW*PTVQTFSMSVLAPH Trigger: ATGAGGAGCTAGCACAGACATGGAAAAAGTCTGAACAGTGGGCCACCATTGAGCAGTTATGCAGCACCGTTGGTGTGCAGCTCCCAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | ATGGGCACCTTTTCTAGGCTTTCTCAACTGCCACACACTGTGCAAGAAGACCACCCGAGGGGAATGTCCTaGTGCTCTGTGTACCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MGTFSRLSQLPHTVQEDHPRGMS*CSVYRP Trigger: CGGACGGTACACAGAGCACAAGGACATTCCCCTCGG...GTGGTCTTCTTGCACAGTGTGTGGCAGTTGAGAAAGCCTAGAAAAGGTGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | GTGTACCAATCTGAGGAGGCTCGTAAATTGCAGCCACTTCAGCCCTaGTGCCGAGGGGAATGTCCTTGTGCTCTGTGTACCGTCCGTATA | + |
|
Preference number: 5 (lower is better) Translates to: VYQSEEARKLQPLQP*CRGECPCALCTVRI Trigger: TATACGGACGGTACACAGAGCACAAGGACATTCCCCTCGGCATCAGGGCTGAAGTGGCTGCAATTTACGAGCCTCCTCAGATTGGTACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | GTGCTTCACAGGAGGCTCCAAGTGGTTCAGATAGTCCTCATCAAATaGCTCCAGTGGGACACAATGCACACACTTGCCCAAGGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VLHRRLQVVQIVLIK*LQWDTMHTLAQGTM Trigger: CATGGTCCCTTGGGCAAGTGTGTGCATTGTGTCCCACTGGAGCCATTTGATGAGGACTATCTGAACCACTTGGAGCCTCCTGTGAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCTAGACCCATCTCTGAGCCTGAAGAGGACCATGGCAGCCACTGGGTTCTTCTCAAACATGATGTaGTCCACGTGTCGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGLDPSLSLKRTMAATGFFSNMM*STCRYF Trigger: GAAATACCGACACGTGGACAACATCATGTTTGAGAA...GAACCCAGTGGCTGCCATGGTCCTCTTCAGGCTCAGAGATGGGTCTAGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | ACATTGGTGCATTCTACTAAGGTGACAAACATGGCTCCCAGCAGTCCACAGCTGGTGGCCTGTGCCAGGTaGGTTCATGAAGGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLVHSTKVTNMAPSSPQLVACAR*VHEGAV Trigger: CACTGCACCTTCATGAACCAACCTGGCACAGGCCAC...CAGCTGTGGACTGCTGGGAGCCATGTTTGTCACCTTAGTAGAATGCACCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGGTAGCTGGAGAGATCACTTGCCTTGCTCTCTACCACTGCTAACCCCTGTTGGGGTGCTTGTTTaGAAAGTCTCCTGCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LAGSWRDHLPCSLPLLTPVGVLV*KVSCSD Trigger: ATCACTGCAGGAGACTTTCAAAACAAGCACCCCAAC...AGGGGTTAGCAGTGGTAGAGAGCAAGGCAAGTGATCTCTCCAGCTACCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | GTCCTTATTCCGACTGTATCGGACTGTACCCTTTCGGGTGTCTTCTaGGACAAGGTCCGTGAATATCCATCCAACCTTCCTCAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLIPTVSDCTLSGVF*DKVREYPSNLPQAK Trigger: CTTGGCCTGAGGAAGGTTGGATGGATATTCACGGACCTTGTCTCAGAAGACACCCGAAAGGGTACAGTCCGATACAGTCGGAATAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS-3UTR CAA 90 bp | GCACAGCAGCCGAGGTTCTTTCTCTTCAAGATCTGCACGGAGACGCTTCAGGGTCTGCTTGCTGAGGTATaGATCGATCTCATCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQQPRFFLFKICTETLQGLLAEV*IDLIFN Trigger: GTTGAAGATGAGATCGATCAATACCTCAGCAAGCAG...ACCCTGAAGCGTCTCCGTGCAGATCTTGAAGAGAAAGAACCTCGGCTGCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | TTTGGTGCAGATACCATTTGGCCATGGGAGGTGTCCCTCACACCCTaGCTTAATCTTGCAGCTGATGTTCTCCAGGGCAACAAACTTACC | + |
|
Preference number: 5 (lower is better) Translates to: FGADTIWPWEVSLTP*LNLAADVLQGNKLT Trigger: GGTAAGTTTGTTGCCCTGGAGAACATCAGCTGCAAGATTAAGTCAGGGTGTGAGGGACACCTCCCATGGCCAAATGGTATCTGCACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 90 bp | GGAATGTCCTTGTGCTCTGTGTACCGTCCGTATAAGTACCCAAAATaGTGGTTTCCGGTCTTTCTCCAGAAGTCAAGGAAGCGGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GMSLCSVYRPYKYPK*WFPVFLQKSRKRSA Trigger: TGCTGACCGCTTCCTTGACTTCTGGAGAAAGACCGGAAACCAGCATTTTGGGTACTTATACGGACGGTACACAGAGCACAAGGACATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | TCCTGCAGCGGCATGACTTCATTGGTGACCAGAAACAGCAGGAGATaGAAGTCGGAAATGGTATCCAAGAACACGGATGAGGTATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSGMTSLVTRNSRR*KSEMVSKNTDEVFW Trigger: CCAGAATACCTCATCCGTGTTCTTGGATACCATTTCCGACTTCCATCTCCTGCTGTTTCTGGTCACCAATGAAGTCATGCCGCTGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 90 bp | GGGCATCCTTACAAGGTAGAAGACACTCATCTCGGACTAGTGCCATaGACTGATTGGATACCTGGTACCCTTCAAAGTGAACCTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GHPYKVEDTHLGLVP*TDWIPGTLQSEPGC Trigger: ACAACCAGGTTCACTTTGAAGGGTACCAGGTATCCAATCAGTGCATGGCACTAGTCCGAGATGAGTGTCTTCTACCTTGTAAGGATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | ATGTCCTTGTGCTCTGTGTACCGTCCGTATAAGTACCCAAAATGCTaGTTTCCGGTCTTTCTCCAGAAGTCAAGGAAGCGGTCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: MSLCSVYRPYKYPKC*FPVFLQKSRKRSAT Trigger: TGTTGCTGACCGCTTCCTTGACTTCTGGAGAAAGACCGGAAACCAGCATTTTGGGTACTTATACGGACGGTACACAGAGCACAAGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 90 bp | TACAAGGTAGAAGACACTCATCTCGGACTAGTGCCATGCACTGATTaGATACCTGGTACCCTTCAAAGTGAACCTGGTTGTCAGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: YKVEDTHLGLVPCTD*IPGTLQSEPGCQDH Trigger: GTGGTCCTGACAACCAGGTTCACTTTGAAGGGTACCAGGTATCCAATCAGTGCATGGCACTAGTCCGAGATGAGTGTCTTCTACCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | AAACAGCAGGAGATGGAAGTCGGAAATGGTATCCAAGAACACGGATaGGGTATTCTGGGACAAGTAGGTGGCCAAACTATGGAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQQEMEVGNGIQEHG*GILGQVGGQTMEVL Trigger: CAGGACTTCCATAGTTTGGCCACCTACTTGTCCCAGAATACCTCATCCGTGTTCTTGGATACCATTTCCGACTTCCATCTCCTGCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044271.15 |
||
| CDS-3UTR CAA 90 bp | TGCTCTCTACCACTGCTAACCCCTCAGGATGACCCTGTCAATACCAAACCAAGCTTCTCAAACATGATGTaGTCCACGTGTCGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSLPLLTPQDDPVNTKPSFSNMM*STCRYF Trigger: GAAATACCGACACGTGGACAACATCATGTTTGAGAA...GCTTGGTTTGGTATTGACAGGGTCATCCTGAGGGGTTAGCAGTGGTAGAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | AAACAGCAGGAGATGGAAGTCGGAAATGGTATCCAAGAACACGGATaGGGTATTCTGGGACAAGTAGGTGGCCAAACTATGGAAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KQQEMEVGNGIQEHG*GILGQVGGQTMEVI Trigger: GATGACTTCCATAGTTTGGCCACCTACTTGTCCCAGAATACCTCATCCGTGTTCTTGGATACCATTTCCGACTTCCATCTCCTGCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | GTCCAGCAAGGCTTGAGGGAAACAGGAACAACAAATCGCCATGCTTaGTTTTTAGCAAATGGAGGGATTTGCTGGACGATGCTGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VQQGLRETGTTNRHA*FLANGGICWTMLLS Trigger: AGATAACAGCATCGTCCAGCAAATCCCTCCATTTGCTAAAAATCAAGCATGGCGATTTGTTGTTCCTGTTTCCCTCAAGCCTTGCTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | GTTGGGGTGCTTGTTTTGAAAGTCTCCTGCAGTGATGCATTCTTCTaGACTCAGGAAATAGGTGTCCTTATTCCGACTGTATCGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGVLVLKVSCSDAFF*TQEIGVLIPTVSDC Trigger: ACAGTCCGATACAGTCGGAATAAGGACACCTATTTCCTGAGTTCAGAAGAATGCATCACTGCAGGAGACTTTCAAAACAAGCACCCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 90 bp | GGGATTTGCTGGACGATGCTGTTATCTCTCCAGTCTTGTTTCTATTaGTGTAAACTGAGAAGCCGTTGTTTTGGAAGCCAAACTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GICWTMLLSLQSCFY*CKLRSRCFGSQTPL Trigger: CAAAGGAGTTTGGCTTCCAAAACAACGGCTTCTCAGTTTACATCAATAGAAACAAGACTGGAGAGATAACAGCATCGTCCAGCAAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 72 bp | GTGCTGACAGGCCCACATGGCAGAGGTAGCAGCGCGTaGAGAGCCCCCGACTGCACCAAACTCGTGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLTGPHGRGSSA*RAPDCTKLVEA Trigger: GGCCTCCACGAGTTTGGTGCAGTCGGGGGCTCTGCACGCGCTGCTACCTCTGCCATGTGGGCCTGTCAGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CAA 90 bp | CTAGGTCCGGGGGAGGCTGCACATCTCGCAGTGGCCTGTGCCAGGTaGGTTCATGAAGGTGCAGTGCTGACAGGCCCACATGGCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPGEAAHLAVACAR*VHEGAVLTGPHGRG Trigger: ACCTCTGCCATGTGGGCCTGTCAGCACTGCACCTTCATGAACCAACCTGGCACAGGCCACTGCGAGATGTGCAGCCTCCCCCGGACCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 72 bp | TGCACATCTCGCAGTGGCCTGTGCCAGGTTGGTTCATaGAGGTGCAGTGCTGACAGGCCCACATGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTSRSGLCQVGS*RCSADRPTWQR Trigger: CCTCTGCCATGTGGGCCTGTCAGCACTGCACCTTCATGAACCAACCTGGCACAGGCCACTGCGAGATGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 72 bp | TCTGAGGAGGCTCGTAAATTGCAGCCACTTCAGCCCTaGTGCCGAGGGGAATGTCCTTGTGCTCTGTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: SEEARKLQPLQP*CRGECPCALCT Trigger: GGTACACAGAGCACAAGGACATTCCCCTCGGCATCAGGGCTGAAGTGGCTGCAATTTACGAGCCTCCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 72 bp | GTCCTCACGGCTTCTAGCAGCAGGCTGATACTGTCCTaGAGCGGCATGACTTCATTGGTGACCAGAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLTASSSRLILS*SGMTSLVTRNS Trigger: GCTGTTTCTGGTCACCAATGAAGTCATGCCGCTGCAGGACAGTATCAGCCTGCTGCTAGAAGCCGTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 72 bp | CCTGTGGCCACTGCAGTAACAAACTTGGATCCAAAATaGCCATCGGGAGAGAGCCGGCAAATGTTGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVATAVTNLDPK*PSGESRQMLGC Trigger: GCACCCCAACATTTGCCGGCTCTCTCCCGATGGTCATTTTGGATCCAAGTTTGTTACTGCAGTGGCCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 72 bp | GCCACTTCAGCCCTGATGCCGAGGGGAATGTCCTTGTaGTCTGTGTACCGTCCGTATAAGTACCCAAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSALMPRGMSL*SVYRPYKYPKC Trigger: GCATTTTGGGTACTTATACGGACGGTACACAGAGCACAAGGACATTCCCCTCGGCATCAGGGCTGAAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 72 bp | AGGCCTGGGAGCTGCACACCAACGGTGCTGCATAACTaGTCAATGGTGGCCCACTGTTCAGACTTTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RPGSCTPTVLHN*SMVAHCSDFFH Trigger: ATGGAAAAAGTCTGAACAGTGGGCCACCATTGAGCAGTTATGCAGCACCGTTGGTGTGCAGCTCCCAGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 72 bp | CGGTATTTCTGTCTGTTCAGCGTGATGGCACTGGGCTaGCATTTGGTGCAGATACCATTTGGCCATGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RYFCLFSVMALG*HLVQIPFGHGR Trigger: CCTCCCATGGCCAAATGGTATCTGCACCAAATGCCAGCCCAGTGCCATCACGCTGAACAGACAGAAATACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CAA 72 bp | GCAGCCACTTCAGCCCTGATGCCGAGGGGAATGTCCTaGTGCTCTGTGTACCGTCCGTATAAGTACCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AATSALMPRGMS*CSVYRPYKYPK Trigger: TTTTGGGTACTTATACGGACGGTACACAGAGCACAAGGACATTCCCCTCGGCATCAGGGCTGAAGTGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CAA 72 bp | TCCGTGAATATCCATCCAACCTTCCTCAGGCCAAGTTaGGCGGCAATCTCGTCAACCACCTCAGCTTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVNIHPTFLRPS*AAISSTTSAFG Trigger: CCCGAAAGCTGAGGTGGTTGACGAGATTGCCGCCAAACTTGGCCTGAGGAAGGTTGGATGGATATTCACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CAA 90 bp | GAGACAAGGTCCGTGAATATCCATCCAACCTTCCTCAGGCCAAGTTaGGCGGCAATCTCGTCAACCACCTCAGCTTTCGGGTCTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETRSVNIHPTFLRPS*AAISSTTSAFGSSR Trigger: TCTGGAAGACCCGAAAGCTGAGGTGGTTGACGAGATTGCCGCCAAACTTGGCCTGAGGAAGGTTGGATGGATATTCACGGACCTTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 72 bp | GATACCATTTGGCCATGGGAGGTGTCCCTCACACCCTaGCTTAATCTTGCAGCTGATGTTCTCCAGGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DTIWPWEVSLTP*LNLAADVLQGN Trigger: GTTGCCCTGGAGAACATCAGCTGCAAGATTAAGTCAGGGTGTGAGGGACACCTCCCATGGCCAAATGGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS GCA 72 bp | ACTGTTCTGTGTACCAATCTGAGGAGGCTCGTAAATTaGAGCCACTTCAGCCCTGATGCCGAGGGGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: TVLCTNLRRLVN*SHFSPDAEGNV Trigger: GACATTCCCCTCGGCATCAGGGCTGAAGTGGCTGCAATTTACGAGCCTCCTCAGATTGGTACACAGAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CAA 72 bp | AGCAGGCTGATACTGTCCTGCAGCGGCATGACTTCATaGGTGACCAGAAACAGCAGGAGATGGAAGTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLILSCSGMTS*VTRNSRRWKSE Trigger: TTCCGACTTCCATCTCCTGCTGTTTCTGGTCACCAATGAAGTCATGCCGCTGCAGGACAGTATCAGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CAA 90 bp | TGGGTCTCGGCTCCGGTAAATCTTCCCATCCTGCTTGCTGAGGTATaGATCGATCTCATCTTCAACCACGTTAGGAGCACCAAAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: WVSAPVNLPILLAEV*IDLIFNHVRSTKGL Trigger: AAGGCCTTTGGTGCTCCTAACGTGGTTGAAGATGAGATCGATCAATACCTCAGCAAGCAGGATGGGAAGATTTACCGGAGCCGAGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 72 bp | CTGTACCCTTTCGGGTGTCTTCTGAGACAAGGTCCGTaGATATCCATCCAACCTTCCTCAGGCCAAGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LYPFGCLLRQGP*ISIQPSSGQVW Trigger: CCAAACTTGGCCTGAGGAAGGTTGGATGGATATTCACGGACCTTGTCTCAGAAGACACCCGAAAGGGTACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS TCA 72 bp | CCGACTGTATCGGACTGTACCCTTTCGGGTGTCTTCTaGGACAAGGTCCGTGAATATCCATCCAACCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PTVSDCTLSGVF*DKVREYPSNLP Trigger: AGGAAGGTTGGATGGATATTCACGGACCTTGTCTCAGAAGACACCCGAAAGGGTACAGTCCGATACAGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 72 bp | CAAGTGGTTCAGATAGTCCTCATCAAATGGCTCCAGTaGGACACAATGCACACACTTGCCCAAGGGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: QVVQIVLIKWLQ*DTMHTLAQGTM Trigger: CATGGTCCCTTGGGCAAGTGTGTGCATTGTGTCCCACTGGAGCCATTTGATGAGGACTATCTGAACCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
||
| CDS CCA 72 bp | AGGAGGCTCCAAGTGGTTCAGATAGTCCTCATCAAATaGCTCCAGTGGGACACAATGCACACACTTGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: RRLQVVQIVLIK*LQWDTMHTLAQ Trigger: TTGGGCAAGTGTGTGCATTGTGTCCCACTGGAGCCATTTGATGAGGACTATCTGAACCACTTGGAGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CCA 72 bp | ATGATGAGATACTCCACAGGCAGGGGACGGGCCAGCTaGGTGATCTCATTGCCAAACTTGTCTATGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: MMRYSTGRGRAS*VISLPNLSMSL Trigger: TAAGGACATAGACAAGTTTGGCAATGAGATCACCCAGCTGGCCCGTCCCCTGCCTGTGGAGTATCTCATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS TCA 72 bp | TCGGGAGAGAGCCGGCAAATGTTGGGGTGCTTGTTTTaGAAGTCTCCTGCAGTGATGCATTCTTCTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: SGESRQMLGCLF*KSPAVMHSSEL Trigger: GAGTTCAGAAGAATGCATCACTGCAGGAGACTTTCAAAACAAGCACCCCAACATTTGCCGGCTCTCTCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CCA 72 bp | TGCTCTGTGTACCGTCCGTATAAGTACCCAAAATGCTaGTTTCCGGTCTTTCTCCAGAAGTCAAGGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: CSVYRPYKYPKC*FPVFLQKSRKR Trigger: CCGCTTCCTTGACTTCTGGAGAAAGACCGGAAACCAGCATTTTGGGTACTTATACGGACGGTACACAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CAA 72 bp | GCTCCGGTAAATCTTCCCATCCTGCTTGCTGAGGTATaGATCGATCTCATCTTCAACCACGTTAGGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: APVNLPILLAEV*IDLIFNHVRST Trigger: GGTGCTCCTAACGTGGTTGAAGATGAGATCGATCAATACCTCAGCAAGCAGGATGGGAAGATTTACCGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CCA 72 bp | GAAGACACTCATCTCGGACTAGTGCCATGCACTGATTaGATACCTGGTACCCTTCAAAGTGAACCTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: EDTHLGLVPCTD*IPGTLQSEPGC Trigger: ACAACCAGGTTCACTTTGAAGGGTACCAGGTATCCAATCAGTGCATGGCACTAGTCCGAGATGAGTGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CCA 72 bp | CCAAGAACACGGATGAGGTATTCTGGGACAAGTAGGTaGCCAAACTATGGAAGTCCTGTGTTTCACCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PRTRMRYSGTSR*PNYGSPVFHPV Trigger: TACTGGGTGAAACACAGGACTTCCATAGTTTGGCCACCTACTTGTCCCAGAATACCTCATCCGTGTTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044271.15 |
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| CDS CCA 72 bp | GGCATGACTTCATTGGTGACCAGAAACAGCAGGAGATaGAAGTCGGAAATGGTATCCAAGAACACGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: GMTSLVTRNSRR*KSEMVSKNTDE Trigger: CTCATCCGTGTTCTTGGATACCATTTCCGACTTCCATCTCCTGCTGTTTCTGGTCACCAATGAAGTCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CAA 72 bp | AAACTGAGAAGCCGTTGTTTTGGAAGCCAAACTCCTTaGCAACCTTTTTCAGGAAGGTGGCAGCCGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KLRSRCFGSQTP*QPFSGRWQPSL Trigger: GAGAGACGGCTGCCACCTTCCTGAAAAAGGTTGCAAAGGAGTTTGGCTTCCAAAACAACGGCTTCTCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS TCA 72 bp | GAGATGGAAGTCGGAAATGGTATCCAAGAACACGGATaGGGTATTCTGGGACAAGTAGGTGGCCAAACTATG | + |
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Preference number: 6 (lower is better) Translates to: EMEVGNGIQEHG*GILGQVGGQTM Trigger: CATAGTTTGGCCACCTACTTGTCCCAGAATACCTCATCCGTGTTCTTGGATACCATTTCCGACTTCCATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS TCA 72 bp | GGCTTGAGGGAAACAGGAACAACAAATCGCCATGCTTaGTTTTTAGCAAATGGAGGGATTTGCTGGACGATG | + |
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Preference number: 6 (lower is better) Translates to: GLRETGTTNRHA*FLANGGICWTM Trigger: CATCGTCCAGCAAATCCCTCCATTTGCTAAAAATCAAGCATGGCGATTTGTTGTTCCTGTTTCCCTCAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS GCA 72 bp | TACAAGGTAGAAGACACTCATCTCGGACTAGTGCCATaGACTGATTGGATACCTGGTACCCTTCAAAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: YKVEDTHLGLVP*TDWIPGTLQSE Trigger: TTCACTTTGAAGGGTACCAGGTATCCAATCAGTGCATGGCACTAGTCCGAGATGAGTGTCTTCTACCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS TCA 72 bp | CAAGGAAGCGGTCAGCAACAGTATGATTCTCAAACATaGTGTTGTCCACGTGTCGGTATTTCTGTCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: QGSGQQQYDSQT*CCPRVGISVCS Trigger: TGAACAGACAGAAATACCGACACGTGGACAACATCATGTTTGAGAATCATACTGTTGCTGACCGCTTCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS CCA 72 bp | AGGAACAACAAATCGCCATGCTTGATTTTTAGCAAATaGAGGGATTTGCTGGACGATGCTGTTATCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RNNKSPCLIFSK*RDLLDDAVISP Trigger: TGGAGAGATAACAGCATCGTCCAGCAAATCCCTCCATTTGCTAAAAATCAAGCATGGCGATTTGTTGTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS TCA 72 bp | TGGACGATGCTGTTATCTCTCCAGTCTTGTTTCTATTaGTGTAAACTGAGAAGCCGTTGTTTTGGAAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: WTMLLSLQSCFY*CKLRSRCFGSQ Trigger: TTGGCTTCCAAAACAACGGCTTCTCAGTTTACATCAATAGAAACAAGACTGGAGAGATAACAGCATCGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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| CDS TCA 72 bp | CTTGTTTTGAAAGTCTCCTGCAGTGATGCATTCTTCTaGACTCAGGAAATAGGTGTCCTTATTCCGACTGTA | + |
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Preference number: 6 (lower is better) Translates to: LVLKVSCSDAFF*TQEIGVLIPTV Trigger: TACAGTCGGAATAAGGACACCTATTTCCTGAGTTCAGAAGAATGCATCACTGCAGGAGACTTTCAAAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044271.15 ENSMUST00000103017.4 |
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