Pregenerated sensors for NPHS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026602Ensembl transcript IDs: ENSMUST00000027896.10, ENSMUST00000193020.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGGCCTTGCTGAAGGAGCCAGGAAACAAGCAGTGGAAGGTATTTaGACTAAGTCTTCAGAAATCATAATCGGACCACATGTCAATTCA | + |
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Preference number: 1 (lower is better) Translates to: KGLAEGARKQAVEGI*TKSSEIIIGPHVNS Trigger: TGAATTGACATGTGGTCCGATTATGATTTCTGAAGACTTAGTTCAAATACCTTCCACTGCTTGTTTCCTGGCTCCTTCAGCAAGGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR TCA 90 bp | CTTTCAACAATGTTGAGTACAAATGTGTCCTTGTATTACAGAGTATaGCAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: LSTMLSTNVSLYYRV*QCPYLSFLCPIIPY Trigger: GTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTGTAATACAAGGACACATTTGTACTCAACATTGTTGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR CCA 90 bp | TGTAGATGTTTGGGCCCATATACTTATGGAAACTCTAGTTTCTGTTaGTATCAAAAGTGTTCTCATCCAGGAGCACCTAAGCTATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: CRCLGPYTYGNSSFC*YQKCSHPGAPKLWK Trigger: CTTCCATAGCTTAGGTGCTCCTGGATGAGAACACTTTTGATACCAACAGAAACTAGAGTTTCCATAAGTATATGGGCCCAAACATCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR GCA 90 bp | GACACAAGTGACTCCATTTTTGTTGTTGGCTTTGAGACAGGGTATTaGTATGTAGATGTGAAGGTTAGTTTTGTTTGCCAACTTGATACA | + |
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Preference number: 1 (lower is better) Translates to: DTSDSIFVVGFETGY*YVDVKVSFVCQLDT Trigger: TGTATCAAGTTGGCAAACAAAACTAACCTTCACATCTACATAGCAATACCCTGTCTCAAAGCCAACAACAAAAATGGAGTCACTTGTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGACCTACTTGTGTGGTTaGCTGTCTTCTCTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: QSMTVPISVLSVPYHSLLTYLCG*LSSLPL Trigger: CAGTGGCAGAGAAGACAGTCAACCACACAAGTAGGT...CAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR GCA 90 bp | ATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCCACTGTCATTTCACTGTGAGGGACACCAAATaGCTCTCTCAGGGATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: MRQPTCVVDCLLCHCHFTVRDTK*LSQGCG Trigger: GCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCAC...AGTGAAATGACAGTGGCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGTATGCTAAGCTACCAGTGAAGAGTCCTTTCAACAATGTTGAGTACAAACCGCAAAGGCCTTGCTaGAGGAGCCAGGAAACAAGC | + |
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Preference number: 2 (lower is better) Translates to: AVYAKLPVKSPFNNVEYKPQRPC*RSQETS Trigger: GCTTGTTTCCTGGCTCCTTCAGCAAGGCCTTTGCGG...TTTGTACTCAACATTGTTGAAAGGACTCTTCACTGGTAGCTTAGCATACACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR CCA 90 bp | CATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTCTGTGTCCTAAGCCCTaGCTTTCCACTCCATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: HICPFCALSFPTVGSNSSLCPKP*LSTPCA Trigger: TGCACATGGAGTGGAAAGCCAGGGCTTAGGACACAG...AGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR CAA 90 bp | CCTTGGGACTACTTTCTGAGAGTTTGGAATTTTAGGCTGGAAAAGTaGTTAACAGCCAGCAACATAGCTAAGTGGGCTGTTTCAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PWDYFLRVWNFRLEK*LTASNIAKWAVSVG Trigger: TCCCACTGAAACAGCCCACTTAGCTATGTTGCTGGCTGTTAACAACTTTTCCAGCCTAAAATTCCAAACTCTCAGAAAGTAGTCCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR CAA 90 bp | ACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTaGGTAGTAACTCTTCTACCCAAGAGATCTGTATCCCATAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TVPISVLSVPYHSLL*VVTLLPKRSVSHKE Trigger: TTCCTTATGGGATACAGATCTCTTGGGTAGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGATGCAGCAGATTAGCATCTCAGACCATCATCATCACAATCTCCAACAGCTTGGGACTACTTTCTaGGAGTTTGGAATTTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PEMQQISISDHHHHNLQQLGTTF*EFGILG Trigger: GCCTAAAATTCCAAACTCTCAGAAAGTAGTCCCAAG...CTGTTGGAGATTGTGATGATGATGGTCTGAGATGCTAATCTGCTGCATCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTACCCAAGCTGCTTCATGTTCTTaGCTGCATGAAGTGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: CPFCALSFPTVGSNSSTQAASCS*LHEVTK Trigger: CTTAGTCACTTCATGCAGGCAAGAACATGAAGCAGC...TTGGGTAGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGCATGTAGCCATCTTGTaGCTTTATACATTCAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QSMTVPISVLSVPYHSLLHVAIL*LYTFKR Trigger: CCTTTTGAATGTATAAAGTCACAAGATGGCTACATG...CAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR GCA 90 bp | CATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTGTTGACTGTCTTCTCTaGCACTGTCATTTCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: HICPFCALSFPTVGSNSSVDCLL*HCHFTV Trigger: CACAGTGAAATGACAGTGGCAGAGAAGACAGTCAAC...AGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGATGCAGCAGATTAGCATCTCAGACCATCATCATCACAATCTCCAACAGGAACCACGTATTCATTaGTTTCTGCATTTGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: PEMQQISISDHHHHNLQQEPRIH*FLHLTV Trigger: CACAGTCAAATGCAGAAAGCAATGAATACGTGGTTC...CTGTTGGAGATTGTGATGATGATGGTCTGAGATGCTAATCTGCTGCATCTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR CCA 90 bp | AATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCCACTGTCATGGATGTGGCTTTATATaGCAGATTCACACAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: NMMRQPTCVVDCLLCHCHGCGFI*QIHTAF Trigger: AAAGGCTGTGTGAATCTGCCATATAAAGCCACATCC...ATGACAGTGGCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTACTTTCTGAGAGTTTaGAATTTTAGGCTGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QSMTVPISVLSVPYHSLLYFLRV*NFRLEK Trigger: CTTTTCCAGCCTAAAATTCCAAACTCTCAGAAAGTA...CAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCCATGTAGCCATCTTGTaGCTTTATACATTCAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PVINMMRQPTCVVDCLLCHVAIL*LYTFKR Trigger: CCTTTTGAATGTATAAAGTCACAAGATGGCTACATG...GCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCGGATGTGGCTTTATATaGCAGATTCACACAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: FPVINMMRQPTCVVDCLLGCGFI*QIHTAF Trigger: AAAGGCTGTGTGAATCTGCCATATAAAGCCACATCC...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR CAA 90 bp | TGTGATGATGTCTGTCTTCCTATCATTCTTTGTATTTTCCCCTCTTaGTGTAGATGTTTGGGCCCATATACTTATGGAAACTCTAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: CDDVCLPIILCIFPS*CRCLGPYTYGNSSF Trigger: GAAACTAGAGTTTCCATAAGTATATGGGCCCAAACATCTACACAAAGAGGGGAAAATACAAAGAATGATAGGAAGACAGACATCATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR CAA 90 bp | TGTCTTCCTATCATTCTTTGTATTTTCCCCTCTTTGTGTAGATGTTaGGGCCCATATACTTATGGAAACTCTAGTTTCTGTTGGTATCAA | + |
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Preference number: 2 (lower is better) Translates to: CLPIILCIFPSLCRC*GPYTYGNSSFCWYQ Trigger: TTGATACCAACAGAAACTAGAGTTTCCATAAGTATATGGGCCCAAACATCTACACAAAGAGGGGAAAATACAAAGAATGATAGGAAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR GCA 72 bp | CCAAACAAGTGCGGGGTGGGGGTGAGGGACACCAAATaGCTCTCTCAGGGATGTGGCTTTATATGGCAGATT | + |
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Preference number: 3 (lower is better) Translates to: PNKCGVGVRDTK*LSQGCGFIWQI Trigger: AATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTTGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR CCA 72 bp | GGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTaGCTTTATATGGCAGATTCACACAGCCTTTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: GGEGHQMPLSGM*LYMADSHSLCP Trigger: TGGGCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR GCA 72 bp | TTCAGTGGGAGTTTGTACGAATACGGAAAGGGGAGATaGCTGTGTCCTAAGCCCTGGCTTTCCACTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: FSGSLYEYGKGR*LCPKPWLSTPC Trigger: ACATGGAGTGGAAAGCCAGGGCTTAGGACACAGGCATCTCCCCTTTCCGTATTCGTACAAACTCCCACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR CCA 72 bp | AAAAATGAAACTAGAGCAGAATTGGTACTGAGGAAGTaGGGTTGTTGCCCCAACATGCCTGACCACAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: KNETRAELVLRK*GCCPNMPDHRA Trigger: AGCCCTGTGGTCAGGCATGTTGGGGCAACAACCCCACTTCCTCAGTACCAATTCTGCTCTAGTTTCATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR TCA 72 bp | CCACGTATTCATTGCTTTCTGCATTTGACTGTGACATaGCCAGCTGCTTCATGTTCTTGCCTGCATGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: PRIHCFLHLTVT*PAASCSCLHEV Trigger: CACTTCATGCAGGCAAGAACATGAAGCAGCTGGTCATGTCACAGTCAAATGCAGAAAGCAATGAATACGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR-3UTR CAA 90 bp | TATACTTATGGAAACTCTAGTTTCTGTTGGTATCAAAAGTGTTCTCATCCAGGAGGATCCGCAAAGGCCTaGCTGAAGGAGCCAGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: YTYGNSSFCWYQKCSHPGGSAKA*LKEPGN Trigger: GTTTCCTGGCTCCTTCAGCAAGGCCTTTGCGGATCC...TCCTGGATGAGAACACTTTTGATACCAACAGAAACTAGAGTTTCCATAAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR CCA 72 bp | CTGGAAAAGTTGTTAACAGCCAGCAACATAGCTAAGTaGGCTGTTTCAGTGGGAGTTTGTACGAATACGGAA | + |
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Preference number: 3 (lower is better) Translates to: LEKLLTASNIAK*AVSVGVCTNTE Trigger: TTCCGTATTCGTACAAACTCCCACTGAAACAGCCCACTTAGCTATGTTGCTGGCTGTTAACAACTTTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR TCA 72 bp | GCTGAAGGAGCCAGGAAACAAGCAGTGGAAGGTATTTaGACTAAGTCTTCAGAAATCATAATCGGACCACAT | + |
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Preference number: 3 (lower is better) Translates to: AEGARKQAVEGI*TKSSEIIIGPH Trigger: ATGTGGTCCGATTATGATTTCTGAAGACTTAGTTCAAATACCTTCCACTGCTTGTTTCCTGGCTCCTTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| 3UTR TCA 72 bp | ATGTTGAGTACAAATGTGTCCTTGTATTACAGAGTATaGCAGTGCCCATATCTGTCCTTTCTGTGCCCTATC | + |
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Preference number: 3 (lower is better) Translates to: MLSTNVSLYYRV*QCPYLSFLCPI Trigger: GATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTGTAATACAAGGACACATTTGTACTCAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR GCA 90 bp | AAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTCGCTTCATGGTGGTTTaGACCAGGAACTGGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: KCGVGVRDTKCLSQGCGFRFMVV*TRNWMA Trigger: AGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCG...AAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR GCA 90 bp | GTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATAGTGAGGGATCGATGTaGCAAGAGGCGCTTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: VRGGGEGHQMPLSGMWLYSEGSM*QEALHG Trigger: ACCATGAAGCGCCTCTTGGCACATCGATCCCTCACT...ATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CCA 90 bp | GAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTCCACTACGGTGGCGGTaGCAGCGGGAGCTCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EYDSAHICPFCALSFPTVPLRWR*QRELGA Trigger: AGCCCCGAGCTCCCGCTGCCACCGCCACCGTAGTGG...AACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CCA 90 bp | AAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTAGAGGCGCTTCATGGTaGTTTGCACCAGGAACTGGA | + |
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Preference number: 4 (lower is better) Translates to: KCGVGVRDTKCLSQGCGFRGASW*FAPGTG Trigger: TCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCT...AAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CCA 90 bp | AAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTCAATCACCCGCACTTTaGCCTGTCTTTGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KCGVGVRDTKCLSQGCGFQSPAL*PVFVPQ Trigger: CTGAGGCACAAAGACAGGCCAAAGTGCGGGTGATTG...AAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CCA 90 bp | AAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTCAAAACCACAGTGGCTaGCTTCTCTGTGGACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: KCGVGVRDTKCLSQGCGFQNHSG*LLCGQR Trigger: TCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTG...AAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CCA 90 bp | GTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATCAAAACCACAGTGGCTaGCTTCTCTGTGGACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: VRGGGEGHQMPLSGMWLYQNHSG*LLCGQR Trigger: TCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTG...ATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTACCCAAGTGCGCGGCCTCTGCTaGCCCTCCCGGCCTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CPFCALSFPTVGSNSSTQVRGLC*PSRPLP Trigger: AGGCAAAGGCCGGGAGGGGCAGCAGAGGCCGCGCAC...TTGGGTAGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR GCA 90 bp | CCAAACAAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGAGAGGCATTTTCCATaGGGTAGTAGCAGACAGCGT | + |
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Preference number: 4 (lower is better) Translates to: PNKCGVGVRDTKCLSQGCERHFP*GSSRQR Trigger: ACGCTGTCTGCTACTACCGCATGGAAAATGCCTCTC...ACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTTGTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR TCA 90 bp | GAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTACCGCCAGAGAGTGCTaGAGCCCAGCTGGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: EYDSAHICPFCALSFPTVTAREC*SPAGSL Trigger: GAGGCTGCCAGCTGGGCTTCAGCACTCTCTGGCGGT...AACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CCA 90 bp | CCAAACAAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTTGGTTTGGAGGAACTTaGGTAGTTGATGCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PNKCGVGVRDTKCLSQGCWFGGT*VVDAPL Trigger: CAAGGGAGCATCAACTACCCAAGTTCCTCCAAACCA...ACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTTGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CCA 90 bp | GTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATTGGTTTGGAGGAACTTaGGTAGTTGATGCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VRGGGEGHQMPLSGMWLYWFGGT*VVDAPL Trigger: CAAGGGAGCATCAACTACCCAAGTTCCTCCAAACCA...ATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR GCA 90 bp | GACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCGCCCCTCCCGGCCTTTaGCTTCTTGTCATCCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: DTKCLSQGCGFIWQIHTAAPPGL*LLVIPR Trigger: TCTAGGGATGACAAGAAGGCAAAGGCCGGGAGGGGC...GGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR GCA 90 bp | GCAGTGTATGCTAAGCTACCAGTGAAGAGTCCTTTCAACAATGTTGAGTACAAAGCGCCACCACTTCCGTaGCCTCCTCACCAGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AVYAKLPVKSPFNNVEYKAPPLP*PPHQGP Trigger: GGGGCCCTGGTGAGGAGGGCACGGAAGTGGTGGCGC...TTTGTACTCAACATTGTTGAAAGGACTCTTCACTGGTAGCTTAGCATACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CCA 90 bp | GGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTGATGCCTTCCTCTaGTCGCTCGCTCTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GHQMPLSGMWLYMADSHSLDAFL*SLALQQ Trigger: CTGCTGGAGAGCGAGCGACCAGAGGAAGGCATCAAG...GCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR TCA 90 bp | CAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCCATCCTCAGGGACTCTaGAGCAGCCTTTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QMPLSGMWLYMADSHSLCHPQGL*SSLFPF Trigger: GAAGGGGAAAAGGCTGCTTCAGAGTCCCTGAGGATG...GCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCAAGAGGCGCTTCATGGTaGTTTGCACCAGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGHQMPLSGMWLYMADSRGASW*FAPGTG Trigger: TCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCT...TGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CCA 90 bp | GACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTGGCTGGCTTCTCTGTaGACAGCGACTGAAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKCLSQGCGFIWQIHTAWLASL*TATEEC Trigger: ACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCA...GGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCCCATTCGCCAGGAGAATTTCAGTaGGGGATCGATGTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSQGCGFIWQIHTAFAHSPGEFQ*GIDVPR Trigger: TCTTGGCACATCGATCCCTCACTGAAATTCTCCTGG...CGAATGGGCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR GCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTCCAGCATCCGGACGTaGGCGGCCTCTGCTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPVINMMRQPTCVVDCLLSSIRT*AASAAP Trigger: AGGGGCAGCAGAGGCCGCGCACGTCCGGATGCTGGA...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCCGCTTCATGGTGGTTTaGACCAGGAACTGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMPLSGMWLYMADSHSLCRFMVV*TRNWMA Trigger: AGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCG...GCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGATGCAGCAGATTAGCATCTCAGACCATCATCATCACAATCTCCAACAGTTTGGCCTGTCTTTGTaGCTCAGCTTCCACCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEMQQISISDHHHHNLQQFGLSL*LSFHRQ Trigger: CTGGCGGTGGAAGCTGAGGCACAAAGACAGGCCAAA...CTGTTGGAGATTGTGATGATGATGGTCTGAGATGCTAATCTGCTGCATCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR CCA 90 bp | ATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCCACTGTCATTTCACTCTTGATGCCTTCCTCTaGTCGCTCGCTCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRQPTCVVDCLLCHCHFTLDAFL*SLALQQ Trigger: CTGCTGGAGAGCGAGCGACCAGAGGAAGGCATCAAG...AGTGAAATGACAGTGGCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTCTGTGGACAGCGACTaGAGAGTGTGCAAGTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QSMTVPISVLSVPYHSLLSVDSD*RVCKYR Trigger: TCGATACTTGCACACTCTTCAGTCGCTGTCCACAGA...CAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCGAGAGGCATTTTCCATaGGGTAGTAGCAGACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QMPLSGMWLYMADSHSLCERHFP*GSSRQR Trigger: ACGCTGTCTGCTACTACCGCATGGAAAATGCCTCTC...GCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATGCAGCAGATTAGCATCTCAGACCATCATCATCACAATCTCCAACAGGTGCTGAAGCCCAGCTaGCAGCCTCACATCCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PEMQQISISDHHHHNLQQVLKPS*QPHILN Trigger: ATTAAGGATGTGAGGCTGCCAGCTGGGCTTCAGCAC...CTGTTGGAGATTGTGATGATGATGGTCTGAGATGCTAATCTGCTGCATCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCAAGCTGGACAGCGGCTaGGGTGCCCGACAGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVINMMRQPTCVVDCLLCKLDSG*GARQNL Trigger: GAGATTCTGTCGGGCACCCCAGCCGCTGTCCAGCTT...GCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGCAGTTCTCTCCACTTTaGTGCCCCAAATACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSMTVPISVLSVPYHSLLQFSPL*CPKYRS Trigger: TGACCTGTATTTGGGGCATCAAAGTGGAGAGAACTG...CAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCCCATTCGGCAACCTTTACATCTTaGGCAATGCTCTTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQGCGFIWQIHTAFAHSATFTS*AMLFLS Trigger: GGAAAGGAAGAGCATTGCCCAAGATGTAAAGGTTGC...CGAATGGGCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCAAGCTGGACAGCGGCTaGGGTGCCCGACAGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPVINMMRQPTCVVDCLLKLDSG*GARQNL Trigger: GAGATTCTGTCGGGCACCCCAGCCGCTGTCCAGCTT...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CCA 90 bp | CATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTTGGCTGGCTTCTCTGTaGACAGCGACTGAAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HICPFCALSFPTVGSNSSWLASL*TATEEC Trigger: ACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCA...AGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCAATCACCTTTACATCTTaGGCAATGCTCTTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEGHQMPLSGMWLYMADSITFTS*AMLFLS Trigger: GGAAAGGAAGAGCATTGCCCAAGATGTAAAGGTGAT...TGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193020.2 |
||
| CDS-3UTR TCA 90 bp | CATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTCCAGGAGAATTTCAGTaGGGGATCGATGTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HICPFCALSFPTVGSNSSPGEFQ*GIDVPR Trigger: TCTTGGCACATCGATCCCTCACTGAAATTCTCCTGG...AGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCCCAAGAGGCGCTTCATaGTGGTTTGCACCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PVINMMRQPTCVVDCLLCPRGAS*WFAPGT Trigger: AGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGG...GCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCAGAGAGTCCTTCTTTTTaGGATTTAGTGGTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGHQMPLSGMWLYMADSESPSF*DLVVQL Trigger: CAGTTGAACCACTAAATCCCAAAAAGAAGGACTCTC...TGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CCA 90 bp | CAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCGAGAGTCCTTCTTTTTaGGATTTAGTGGTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QMPLSGMWLYMADSHSLCESPSF*DLVVQL Trigger: CAGTTGAACCACTAAATCCCAAAAAGAAGGACTCTC...GCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCAGTGAGGGATCGATGTaGCAAGAGGCGCTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPVINMMRQPTCVVDCLLSEGSM*QEALHG Trigger: ACCATGAAGCGCCTCTTGGCACATCGATCCCTCACT...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR GCA 90 bp | AACCTACTTGTGTGGTTGACTGTCTTCTCTGCCACTGTCATTTCACTGTGTTCTTTACATCTTGGGCAATaGTCTTCCTTTCCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLLVWLTVFSATVISLCSLHLGQ*SSFPGE Trigger: TTCTCCTGGAAAGGAAGAGCATTGCCCAAGATGTAA...AGAACACAGTGAAATGACAGTGGCAGAGAAGACAGTCAACCACACAAGTAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| 3UTR CAA 72 bp | ATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTaGGTAGTAACTCTTCTACCCAAGAGATCTGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: ISVLSVPYHSLL*VVTLLPKRSVS Trigger: GGATACAGATCTCTTGGGTAGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR TCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTCTGTGGACAGCGACTaGAGAGTGTGCAAGTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: FPVINMMRQPTCVVDCLLSVDSD*RVCKYR Trigger: TCGATACTTGCACACTCTTCAGTCGCTGTCCACAGA...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGATGCAGCAGATTAGCATCTCAGACCATCATCATCACAATCTCCAACAGACTCTTTCATACTCTTaGACAACCTTTATGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEMQQISISDHHHHNLQQTLSYS*TTFMQN Trigger: GTTCTGCATAAAGGTTGTGCAAGAGTATGAAAGAGT...CTGTTGGAGATTGTGATGATGATGGTCTGAGATGCTAATCTGCTGCATCTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CCA 90 bp | CCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCTTGGTTACCACCTCATaGAAAGGTATTTCCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVINMMRQPTCVVDCLLCLVTTS*KGISKV Trigger: GACCTTGGAAATACCTTTCCATGAGGTGGTAACCAA...GCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| 3UTR CAA 72 bp | TACTTTCTGAGAGTTTGGAATTTTAGGCTGGAAAAGTaGTTAACAGCCAGCAACATAGCTAAGTGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFLRVWNFRLEK*LTASNIAKWAV Trigger: AACAGCCCACTTAGCTATGTTGCTGGCTGTTAACAACTTTTCCAGCCTAAAATTCCAAACTCTCAGAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTTACATCTTGGGCAATaGTCTTCCTTTCCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPVINMMRQPTCVVDCLLLHLGQ*SSFPGE Trigger: TTCTCCTGGAAAGGAAGAGCATTGCCCAAGATGTAA...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTTGGTTACCACCTCATaGAAAGGTATTTCCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPVINMMRQPTCVVDCLLLVTTS*KGISKV Trigger: GACCTTGGAAATACCTTTCCATGAGGTGGTAACCAA...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| 3UTR CAA 72 bp | GTCTGTCTTCCTATCATTCTTTGTATTTTCCCCTCTTaGTGTAGATGTTTGGGCCCATATACTTATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCLPIILCIFPS*CRCLGPYTYGN Trigger: GTTTCCATAAGTATATGGGCCCAAACATCTACACAAAGAGGGGAAAATACAAAGAATGATAGGAAGACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| 3UTR CAA 72 bp | ATCATTCTTTGTATTTTCCCCTCTTTGTGTAGATGTTaGGGCCCATATACTTATGGAAACTCTAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IILCIFPSLCRC*GPYTYGNSSFC Trigger: ACAGAAACTAGAGTTTCCATAAGTATATGGGCCCAAACATCTACACAAAGAGGGGAAAATACAAAGAATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS GCA 90 bp | CGCTGTCCGCCCGGTGCTCTGCCGCTCTGCTCCAGCATCCGGACGTaGGCGGCCTCTGCTGCCCCTCCCGGCCTTTGCCTTCTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RCPPGALPLCSSIRT*AASAAPPGLCLLVI Trigger: GATGACAAGAAGGCAAAGGCCGGGAGGGGCAGCAGAGGCCGCGCACGTCCGGATGCTGGAGCAGAGCGGCAGAGCACCGGGCGGACAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS GCA 90 bp | GCGACTGAAGAGTGTGCAAGTATCGAAGCTGGACAGCGGCTGGGGTaGCCGACAGAATCTCAGCCGCCATCCTCAGGGACTCTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATEECASIEAGQRLG*PTESQPPSSGTLKQ Trigger: CTGCTTCAGAGTCCCTGAGGATGGCGGCTGAGATTCTGTCGGGCACCCCAGCCGCTGTCCAGCTTCGATACTTGCACACTCTTCAGTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS TCA 90 bp | GGCAAAGGCAAAACCACAGTGGCTGGCTTCTCTGTGGACAGCGACTaGAGAGTGTGCAAGTATCGAAGCTGGACAGCGGCTGGGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GKGKTTVAGFSVDSD*RVCKYRSWTAAGVP Trigger: GGGCACCCCAGCCGCTGTCCAGCTTCGATACTTGCACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTGCCTTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGCGGGGTGGGGGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTAACAGGCCAGGACCTTaGGCTCTTCCAGGAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KCGVGVRDTKCLSQGCGFNRPGP*ALPGSR Trigger: TCTGCTTCCTGGAAGAGCCAAAGGTCCTGGCCTGTT...AAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACCCCCACCCCGCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS TCA 90 bp | ACTTTGGCCTGTCTTTGTGCCTCAGCTTCCACCGCCAGAGAGTGCTaGAGCCCAGCTGGCAGCCTCACATCCTTAATTTCAGTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLACLCASASTAREC*SPAGSLTSLISVLS Trigger: GGAGAGAACTGAAATTAAGGATGTGAGGCTGCCAGCTGGGCTTCAGCACTCTCTGGCGGTGGAAGCTGAGGCACAAAGACAGGCCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS GCA 90 bp | GGCAATGCTCTTCCTTTCCAGGAGAATTTCAGTGAGGGATCGATGTaGCAAGAGGCGCTTCATGGTGGTTTGCACCAGGAACTGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNALPFQENFSEGSM*QEALHGGLHQELDG Trigger: GCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGCACATCGATCCCTCACTGAAATTCTCCTGGAAAGGAAGAGCATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS CCA 90 bp | GCATGTCAAATGGCAAAGGCAAAACCACAGTGGCTGGCTTCTCTGTaGACAGCGACTGAAGAGTGTGCAAGTATCGAAGCTGGACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ACQMAKAKPQWLASL*TATEECASIEAGQR Trigger: CCGCTGTCCAGCTTCGATACTTGCACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTGCCTTTGCCATTTGACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CAA 90 bp | GACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCCACTTTGGCCTGTCTTaGTGCCTCAGCTTCCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: DTKCLSQGCGFIWQIHTAHFGLS*CLSFHR Trigger: GCGGTGGAAGCTGAGGCACAAAGACAGGCCAAAGTG...GGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
||
| CDS GCA 90 bp | ATTTCAGTGAGGGATCGATGTGCCAAGAGGCGCTTCATGGTGGTTTaGACCAGGAACTGGATGGCTTTGGACACATGGGCTAGACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISVRDRCAKRRFMVV*TRNWMALDTWARLL Trigger: AAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGCACATCGATCCCTCACTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS CCA 90 bp | GATGTGCCAAGAGGCGCTTCATGGTGGTTTGCACCAGGAACTGGATaGCTTTGGACACATGGGCTAGACTGCTTAGAAGAAGAGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DVPRGASWWFAPGTG*LWTHGLDCLEEERH Trigger: ATGCCTCTCTTCTTCTAAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGCACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS CCA 90 bp | GATCGATGTGCCAAGAGGCGCTTCATGGTGGTTTGCACCAGGAACTaGATGGCTTTGGACACATGGGCTAGACTGCTTAGAAGAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DRCAKRRFMVVCTRN*MALDTWARLLRRRE Trigger: CTCTCTTCTTCTAAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGCACATCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS-3UTR CAA 90 bp | GACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCGTAGTTGATGCTCCCTaGTGCTCTGTTGCCGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DTKCLSQGCGFIWQIHTAVVDAP*CSVAGR Trigger: TCTCCCGGCAACAGAGCACAAGGGAGCATCAACTAC...GGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
||
| CDS TCA 90 bp | CCTTTACATCTTGGGCAATGCTCTTCCTTTCCAGGAGAATTTCAGTaGGGGATCGATGTGCCAAGAGGCGCTTCATGGTGGTTTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PLHLGQCSSFPGEFQ*GIDVPRGASWWFAP Trigger: TGGTGCAAACCACCATGAAGCGCCTCTTGGCACATCGATCCCTCACTGAAATTCTCCTGGAAAGGAAGAGCATTGCCCAAGATGTAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS GCA 90 bp | TGGTTTGCACCAGGAACTGGATGGCTTTGGACACATGGGCTAGACTaGTTAGAAGAAGAGAGGCATTTTCCATGCGGTAGTAGCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: WFAPGTGWLWTHGLD*LEEERHFPCGSSRQ Trigger: CTGTCTGCTACTACCGCATGGAAAATGCCTCTCTTCTTCTAAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 90 bp | AGGACAAAAGGCTTAGCATGTCAAATGGCAAAGGCAAAACCACAGTaGCTGGCTTCTCTGTGGACAGCGACTGAAGAGTGTGCAAGTATC | + |
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Preference number: 5 (lower is better) Translates to: RTKGLACQMAKAKPQ*LASLWTATEECASI Trigger: GATACTTGCACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTGCCTTTGCCATTTGACATGCTAAGCCTTTTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGGACACCAAATGCCTCTCTCAGGGATGTGGCTTTATATGGCAGATTCATCAGTTCTCTCCACTTaGATGCCCCAAATACAGGTC | + |
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Preference number: 5 (lower is better) Translates to: GEGHQMPLSGMWLYMADSSVLST*MPQIQV Trigger: GACCTGTATTTGGGGCATCAAAGTGGAGAGAACTGA...TGAATCTGCCATATAAAGCCACATCCCTGAGAGAGGCATTTGGTGTCCCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS TCA 90 bp | TTTTGGGATTTAGTGGTTCAACTGGTTTGGAGGAACTTGGGTAGTTaGTGCTCCCTTGTGCTCTGTTGCCGGGAGAGGACAAAAGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: FWDLVVQLVWRNLGS*CSLVLCCRERTKGL Trigger: TAAGCCTTTTGTCCTCTCCCGGCAACAGAGCACAAGGGAGCATCAACTACCCAAGTTCCTCCAAACCAGTTGAACCACTAAATCCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CAA 90 bp | CATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTTGGTAGTAACTCTTCTAACAGGCCAGGACCTTaGGCTCTTCCAGGAAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: HICPFCALSFPTVGSNSSNRPGP*ALPGSR Trigger: TCTGCTTCCTGGAAGAGCCAAAGGTCCTGGCCTGTT...AGAAGAGTTACTACCAACAGTAGGGAATGATAGGGCACAGAAAGGACAGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CAA 90 bp | CCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCGCAATCACCCGCACTTaGGCCTGTCTTTGTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PVINMMRQPTCVVDCLLCAITRT*ACLCAS Trigger: TGAGGCACAAAGACAGGCCAAAGTGCGGGTGATTGC...GCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CAA 90 bp | TGGGACTACTTTCTGAGAGTTTGGAATTTTAGGCTGGAAAAGTTGTTAACAGCCGTAGTTGATGCTCCCTaGTGCTCTGTTGCCGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: WDYFLRVWNFRLEKLLTAVVDAP*CSVAGR Trigger: TCTCCCGGCAACAGAGCACAAGGGAGCATCAACTAC...GGCTGTTAACAACTTTTCCAGCCTAAAATTCCAAACTCTCAGAAAGTAGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CAA 90 bp | CTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCCCATTCGGGAGAGTCCTTCTTTTaGGGATTTAGTGGTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: LSQGCGFIWQIHTAFAHSGESFF*GFSGST Trigger: AGTTGAACCACTAAATCCCAAAAAGAAGGACTCTCC...CGAATGGGCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCAGGGATGTGGCTTTATATGGCAGATTCACACAGCCTTTGCCCATTCGTACTCTTTCATACTCTaGCACAACCTTTATGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LSQGCGFIWQIHTAFAHSYSFIL*HNLYAE Trigger: TTCTGCATAAAGGTTGTGCAAGAGTATGAAAGAGTA...CGAATGGGCAAAGGCTGTGTGAATCTGCCATATAAAGCCACATCCCTGAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTATGACAGTGCCCATATCTGTCCTTTCTGTGCCCTATCATTCCCTACTGTACTCTTTCATACTCTaGCACAACCTTTATGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: QSMTVPISVLSVPYHSLLYSFIL*HNLYAE Trigger: TTCTGCATAAAGGTTGTGCAAGAGTATGAAAGAGTA...CAGTAGGGAATGATAGGGCACAGAAAGGACAGATATGGGCACTGTCATACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CAA 90 bp | TGGGACTACTTTCTGAGAGTTTGGAATTTTAGGCTGGAAAAGTTGTTAACAGCCGGCAACCTTTACATCTaGGGCAATGCTCTTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: WDYFLRVWNFRLEKLLTAGNLYI*GNALPF Trigger: GAAAGGAAGAGCATTGCCCAAGATGTAAAGGTTGCC...GGCTGTTAACAACTTTTCCAGCCTAAAATTCCAAACTCTCAGAAAGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS-3UTR CAA 90 bp | ATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCTGCCACTGTCATTTCACTGGAGAGTCCTTCTTTTaGGGATTTAGTGGTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: MRQPTCVVDCLLCHCHFTGESFF*GFSGST Trigger: AGTTGAACCACTAAATCCCAAAAAGAAGGACTCTCC...AGTGAAATGACAGTGGCAGAGAAGACAGTCAACCACACAAGTAGGTTGTCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS-3UTR CAA 90 bp | TTTCCTGTAATTAATATGATGAGACAACCTACTTGTGTGGTTGACTGTCTTCTCAATCACCTTTACATCTaGGGCAATGCTCTTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FPVINMMRQPTCVVDCLLNHLYI*GNALPF Trigger: GAAAGGAAGAGCATTGCCCAAGATGTAAAGGTGATT...GAGAAGACAGTCAACCACACAAGTAGGTTGTCTCATCATATTAATTACAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193020.2 |
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| CDS GCA 72 bp | GAGCTCGGGGCTCCCCTCGGGTCGCTGTCCGCCCGGTaGTCTGCCGCTCTGCTCCAGCATCCGGACGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ELGAPLGSLSAR*SAALLQHPDVR Trigger: GCGCACGTCCGGATGCTGGAGCAGAGCGGCAGAGCACCGGGCGGACAGCGACCCGAGGGGAGCCCCGAGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS GCA 72 bp | GCCGCTCTGCTCCAGCATCCGGACGTGCGCGGCCTCTaGTGCCCCTCCCGGCCTTTGCCTTCTTGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: AALLQHPDVRGL*CPSRPLPSCHP Trigger: GGGATGACAAGAAGGCAAAGGCCGGGAGGGGCAGCAGAGGCCGCGCACGTCCGGATGCTGGAGCAGAGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS GCA 72 bp | GAGTGTGCAAGTATCGAAGCTGGACAGCGGCTGGGGTaGCCGACAGAATCTCAGCCGCCATCCTCAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: ECASIEAGQRLG*PTESQPPSSGT Trigger: AGTCCCTGAGGATGGCGGCTGAGATTCTGTCGGGCACCCCAGCCGCTGTCCAGCTTCGATACTTGCACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 72 bp | CTGAAGAGTGTGCAAGTATCGAAGCTGGACAGCGGCTaGGGTGCCCGACAGAATCTCAGCCGCCATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LKSVQVSKLDSG*GARQNLSRHPQ Trigger: CTGAGGATGGCGGCTGAGATTCTGTCGGGCACCCCAGCCGCTGTCCAGCTTCGATACTTGCACACTCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CAA 72 bp | GAGGGATCGATGTGCCAAGAGGCGCTTCATGGTGGTTaGCACCAGGAACTGGATGGCTTTGGACACATGGGC | + |
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Preference number: 6 (lower is better) Translates to: EGSMCQEALHGG*HQELDGFGHMG Trigger: GCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGCACATCGATCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS TCA 72 bp | TGTCTTTGTGCCTCAGCTTCCACCGCCAGAGAGTGCTaGAGCCCAGCTGGCAGCCTCACATCCTTAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: CLCASASTAREC*SPAGSLTSLIS Trigger: TGAAATTAAGGATGTGAGGCTGCCAGCTGGGCTTCAGCACTCTCTGGCGGTGGAAGCTGAGGCACAAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027896.10 |
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| CDS CCA 72 bp | GCCAAGAGGCGCTTCATGGTGGTTTGCACCAGGAACTaGATGGCTTTGGACACATGGGCTAGACTGCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: AKRRFMVVCTRN*MALDTWARLLR Trigger: TCTAAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS TCA 72 bp | TTAGTGGTTCAACTGGTTTGGAGGAACTTGGGTAGTTaGTGCTCCCTTGTGCTCTGTTGCCGGGAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: LVVQLVWRNLGS*CSLVLCCRERT Trigger: TGTCCTCTCCCGGCAACAGAGCACAAGGGAGCATCAACTACCCAAGTTCCTCCAAACCAGTTGAACCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS GCA 72 bp | CTTCCTTTCCAGGAGAATTTCAGTGAGGGATCGATGTaGCAAGAGGCGCTTCATGGTGGTTTGCACCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPFQENFSEGSM*QEALHGGLHQE Trigger: TTCCTGGTGCAAACCACCATGAAGCGCCTCTTGGCACATCGATCCCTCACTGAAATTCTCCTGGAAAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 72 bp | AGAGGCGCTTCATGGTGGTTTGCACCAGGAACTGGATaGCTTTGGACACATGGGCTAGACTGCTTAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: RGASWWFAPGTG*LWTHGLDCLEE Trigger: TTCTTCTAAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCACCATGAAGCGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 72 bp | ATGGCAAAGGCAAAACCACAGTGGCTGGCTTCTCTGTaGACAGCGACTGAAGAGTGTGCAAGTATCGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: MAKAKPQWLASL*TATEECASIEA Trigger: AGCTTCGATACTTGCACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTGCCTTTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 72 bp | GGCTTAGCATGTCAAATGGCAAAGGCAAAACCACAGTaGCTGGCTTCTCTGTGGACAGCGACTGAAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: GLACQMAKAKPQ*LASLWTATEEC Trigger: ACACTCTTCAGTCGCTGTCCACAGAGAAGCCAGCCACTGTGGTTTTGCCTTTGCCATTTGACATGCTAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 72 bp | GTGGTTTGCACCAGGAACTGGATGGCTTTGGACACATaGGCTAGACTGCTTAGAAGAAGAGAGGCATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VVCTRNWMALDT*ARLLRRREAFS Trigger: GGAAAATGCCTCTCTTCTTCTAAGCAGTCTAGCCCATGTGTCCAAAGCCATCCAGTTCCTGGTGCAAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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| CDS CCA 72 bp | ATCTCCATTATAAACATATCTTTGGTTACCACCTCATaGAAAGGTATTTCCAAGGTCTGGAGACGGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: ISIINISLVTTS*KGISKVWRRRS Trigger: TGATCTCCGTCTCCAGACCTTGGAAATACCTTTCCATGAGGTGGTAACCAAAGATATGTTTATAATGGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027896.10 ENSMUST00000193020.2 |
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