Pregenerated sensors for NPHP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027378Ensembl transcript IDs: ENSMUST00000028857.14, ENSMUST00000110357.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTaGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAAGCTCCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YLHTKAYDYVLTSLS*AQLFEASLPGSSLG Trigger: ACCCAGGGAGCTTCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| 3UTR TCA 72 bp | CTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTaGGGCAAGTCTTCCTGGAAGCTCCCTGGGTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LRSNQSVFGSVV*GKSSWKLPGSS Trigger: ACTGGACCCAGGGAGCTTCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTGCAGCTTCAGCTCCTaGCCGCGGCGCCTCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQCSFSS*PRRLSA Trigger: GGCGCTGAGGCGCCGCGGGCAGGAGCTGAAGCTGCA...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTTGCAGCTTCAGCTCCTaGCCGCGGCGCCTCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFCSFSS*PRRLSA Trigger: GGCGCTGAGGCGCCGCGGGCAGGAGCTGAAGCTGCA...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAGGCAGCAGTGTCGAGTaGAGAAGAGGGAGCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGGSSVE*RRGSTQ Trigger: CTGCGTGCTCCCTCTTCTGCACTCGACACTGCTGCC...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTTTTCTGGCAGCAGACTaGGCATGGCCCTGGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASFLAAD*AWPWTS Trigger: GGAGGTCCAGGGCCATGCTCAGTCTGCTGCCAGAAA...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGACAGACCAGGAACTCCTaGGAGCATCCATCACGTCGG | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGQTRNS*EHPSRR Trigger: CCGACGTGATGGATGCTCTCAGGAGTTCCTGGTCTG...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGATCTCTGAAGGCCAGCTaGGATGTCGTGAGCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGSLKAS*DVVSSG Trigger: GCCAGAGCTCACGACATCGCAGCTGGCCTTCAGAGA...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCCCCACCAGGGTTTCTaGCAGCAGACTGAGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASPHQGF*QQTEHG Trigger: GCCATGCTCAGTCTGCTGCCAGAAACCCTGGTGGGG...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGACACCTGGGCTCCATCTaGAGTTTCATCCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGHLGSI*SFIHHL Trigger: GAGGTGGTGGATGAAACTGCAGATGGAGCCCAGGTG...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAGGAAGGCCGGAATCCTaGAGGAATGGCTCCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGGRPES*RNGSHC Trigger: ACAATGGGAGCCATTCCTGCAGGATTCCGGCCTTCC...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTGCAAGCTCCTGCAGCTaGCAGGCTAGCTTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASASSCS*QASFSR Trigger: TCTGGAGAAGCTAGCCTGCCAGCTGCAGGAGCTTGC...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGCTTCATCCAGCAGCTaGGAGAGCGTGGAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFASSSS*ESVEGR Trigger: CCGGCCTTCCACGCTCTCCCAGCTGCTGGATGAAGC...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028857.14 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGCCTTCATCCAGCAGCTaGGAGAGCGTGGAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEPSSSS*ESVEGR Trigger: CCGGCCTTCCACGCTCTCCCAGCTGCTGGATGAAGG...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTTCTGGCAGCAGACTaGGCATGGCCCTGGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQFLAAD*AWPWTS Trigger: GGAGGTCCAGGGCCATGCTCAGTCTGCTGCCAGAAA...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTGGGGAGGCTTGCTCTTaGTTTCCTTCTCCATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASGEACS*FPSPSP Trigger: AGGGGATGGAGAAGGAAAGCAAGAGCAAGCCTCCCC...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTGGAAGGCCGGAATCCTaGAGGAATGGCTCCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASGRPES*RNGSHC Trigger: ACAATGGGAGCCATTCCTGCAGGATTCCGGCCTTCC...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGCCCCACCAGGGTTTCTaGCAGCAGACTGAGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQPHQGF*QQTEHG Trigger: GCCATGCTCAGTCTGCTGCCAGAAACCCTGGTGGGG...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| 3UTR CAA 72 bp | TATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTaGTTTGAGGCAAGTCTTCCTGGAAGCTCCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YDYVLTSLSLAQ*FEASLPGSSLG Trigger: ACCCAGGGAGCTTCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTTTCTCCATCCCCTTCTaGCTCTTCTTCCTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASFSIPF*LFFLST Trigger: GGTGGAGAGGAAGAAGAGTCAGAAGGGGATGGAGAA...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTAGTAGGTCCTGGGAATaGGACCCTCAACTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASSRSWE*DPQLLQ Trigger: CTGAAGGAGTTGAGGGTCTCATTCCCAGGACCTACT...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGCAGACCAGGAACTCCTaGGAGCATCCATCACGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEQTRNS*EHPSRR Trigger: CCGACGTGATGGATGCTCTCAGGAGTTCCTGGTCTG...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAGTTCTCTGCTTCACCTaGGCTCCATCTGCAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGVLCFT*APSAVS Trigger: TGAAACTGCAGATGGAGCCCAGGTGAAGCAGAGAAC...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTTGCCCTGTGCTCTTCTaGACACTGAAGGGTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASCPVLF*TLKGPL Trigger: AAGTGGACCCTTCAGTGTCCAGAAGAGCACAGGGCA...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGATGGCAAGATGCCAGTaGCCTGAGGAGAGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQMARCQ*PEERRS Trigger: GGACCTTCTCTCCTCAGGTCACTGGCATCTTGCCAT...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTATGGCAAGATGCCAGTaGCCTGAGGAGAGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFMARCQ*PEERRS Trigger: GGACCTTCTCTCCTCAGGTCACTGGCATCTTGCCAT...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAAGGTCAAATGGTTTGTaGACTCCATCTGGTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGRSNGL*TPSGDS Trigger: GCTGTCACCAGATGGAGTTCACAAACCATTTGACCT...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGCACCTGGGCTCCATCTaGAGTTTCATCCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQHLGSI*SFIHHL Trigger: GAGGTGGTGGATGAAACTGCAGATGGAGCCCAGGTG...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGTTCTCCATCCCCTTCTaGCTCTTCTTCCTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEFSIPF*LFFLST Trigger: GGTGGAGAGGAAGAAGAGTCAGAAGGGGATGGAGAA...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTAGTAGGTCCTGGGAATaGGACCCTCAACTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFSRSWE*DPQLLQ Trigger: CTGAAGGAGTTGAGGGTCTCATTCCCAGGACCTACT...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTTGCTCTTCTGGACACTaGAGGGTCCACTTCAACACC | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFCSSGH*RVHFNT Trigger: GGTGTTGAAGTGGACCCTTCAGTGTCCAGAAGAGCA...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGACCAAACTATCAACCTaGAGCTTCAGCTCCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFETKLST*SFSSCP Trigger: CGGGCAGGAGCTGAAGCTGCAGGTTGATAGTTTGGT...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGACCAAACTATCAACCTaGAGCTTCAGCTCCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQTKLST*SFSSCP Trigger: CGGGCAGGAGCTGAAGCTGCAGGTTGATAGTTTGGT...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTGACAGTTTCTGTTTCTaGTTGTTTCGGGGAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASDSFCF*LFRGGL Trigger: CAAGCCTCCCCGAAACAAGCAGAAACAGAAACTGTC...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGTGCCCTGTGCTCTTCTaGACACTGAAGGGTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFECPVLF*TLKGPL Trigger: AAGTGGACCCTTCAGTGTCCAGAAGAGCACAGGGCA...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGACTCCGAAAGGTCAAATaGTTTGTGAACTCCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGLRKVK*FVNSIW Trigger: CCAGATGGAGTTCACAAACCATTTGACCTTTCGGAG...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGAAGATGCCAGTGACCTaGGGAGAGAAGGTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQKMPVT*GEKVHV Trigger: AACATGGACCTTCTCTCCTCAGGTCACTGGCATCTT...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGTGTTTCGGGGAGGCTTaGTCTTGCTTTCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFECFGEA*SCFPSP Trigger: TGGAGAAGGAAAGCAAGAGCAAGCCTCCCCGAAACA...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTTGTTTCGGGGAGGCTTaGTCTTGCTTTCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFCFGEA*SCFPSP Trigger: TGGAGAAGGAAAGCAAGAGCAAGCCTCCCCGAAACA...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGTGGGAATCAGTTCTCTaGTTCACCTGGGCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEWESVL*FTWAPS Trigger: AGATGGAGCCCAGGTGAAGCAGAGAACTGATTCCCA...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTTCTGACGGAAAACACTaGCCTGTGCTCTTCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFSDGKH*PVLFWT Trigger: TGTCCAGAAGAGCACAGGGCAGTGTTTTCCGTCAGA...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGAAGTTGAGGCTGCCTaGGCACACTTATCATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEEVEAA*AHLSSD Trigger: GTCAGATGATAAGTGTGCGCAGGCAGCCTCAACTTC...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGGAAGTTGAGGCTGCCTaGGCACACTTATCATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQEVEAA*AHLSSD Trigger: GTCAGATGATAAGTGTGCGCAGGCAGCCTCAACTTC...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGCGTACAGCACTCCAGTaGGAATCAGTTCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFERTALQ*ESVLCF Trigger: GAAGCAGAGAACTGATTCCCACTGGAGTGCTGTACG...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTCGTACAGCACTCCAGTaGGAATCAGTTCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFRTALQ*ESVLCF Trigger: GAAGCAGAGAACTGATTCCCACTGGAGTGCTGTACG...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| 3UTR CAA 72 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTaGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLS*AQLFEASLPGS Trigger: GCTTCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR TCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGAGGTCAAATGGTTTGTaGACTCCATCTGGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQRSNGL*TPSGDS Trigger: GCTGTCACCAGATGGAGTTCACAAACCATTTGACCT...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGGACAGTTTCTGTTTCTaGTTGTTTCGGGGAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQDSFCF*LFRGGL Trigger: CAAGCCTCCCCGAAACAAGCAGAAACAGAAACTGTC...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAGAGTTCGTATGTTTTTaGTGGAATAGGAACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YVLTSLSLAQLFEASLPGEFVCF*WNRNST Trigger: AGTGGAGTTCCTATTCCAGCAAAAACATACGAACTC...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGAATGGCTTTCCATCTTaGAGCCTCTGTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQNGFPS*SLCLFL Trigger: GAGGAAGAGACAGAGGCTGCAAGATGGAAAGCCATT...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTAATGGCTTTCCATCTTaGAGCCTCTGTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFNGFPS*SLCLFL Trigger: GAGGAAGAGACAGAGGCTGCAAGATGGAAAGCCATT...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CCA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTGTATGCTTGTTCCTaGGAGAGGGATCATTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AYDYVLTSLSLAQLFEASLYACS*ERDHFT Trigger: TGTAAAATGATCCCTCTCCCAGGAACAAGCATACAG...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGAAGGTCCATGTTTTTaGCTTCTTAGGCTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEEGPCF*LLRLPH Trigger: GTGTGGCAGCCTAAGAAGCCAAAAACATGGACCTTC...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGCCCAAGGTCTGGAGTTaGAGAATTGGACCTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEPKVWS*RIGPDK Trigger: TTTATCAGGTCCAATTCTTCAACTCCAGACCTTGGG...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR TCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGCCCAAGGTCTGGAGTTaGAGAATTGGACCTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQPKVWS*RIGPDK Trigger: TTTATCAGGTCCAATTCTTCAACTCCAGACCTTGGG...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAATGGCTCCCATTGTaGCTAACACATCAACGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFEWLPL*LTHQRY Trigger: ATACCGTTGATGTGTTAGCCACAATGGGAGCCATTC...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGCTCCGAAAGGTCAAATaGTTTGTGAACTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQLRKVK*FVNSIW Trigger: CCAGATGGAGTTCACAAACCATTTGACCTTTCGGAG...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGCTTTTTCGTAAGGAGTaGCGCCATTCAAGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFELFRKE*RHSRRV Trigger: AACTCTTCTTGAATGGCGGCACTCCTTACGAAAAAG...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | CACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTCTTTTTCGTAAGGAGTaGCGCCATTCAAGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTKAYDYVLTSLSLAQLFLFRKE*RHSRRV Trigger: AACTCTTCTTGAATGGCGGCACTCCTTACGAAAAAG...AAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGCTGTATGCTTGTTCCTaGGAGAGGGATCATTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQLYACS*ERDHFT Trigger: TGTAAAATGATCCCTCTCCCAGGAACAAGCATACAG...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGGAGTTCGTATGTTTTTaGTGGAATAGGAACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQEFVCF*WNRNST Trigger: AGTGGAGTTCCTATTCCAGCAAAAACATACGAACTC...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTCTCACCAGTTGAATTaGGAATGTAAGAAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQSHQLN*ECKKFQ Trigger: TTGGAATTTCTTACATTCGCAATTCAACTGGTGAGA...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGTCTCACCAGTTGAATTaGGAATGTAAGAAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKAYDYVLTSLSLAQLFESHQLN*ECKKFQ Trigger: TTGGAATTTCTTACATTCGCAATTCAACTGGTGAGA...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS GCA 90 bp | CCTCCTCACCGTCCTCCTCACCGTCCTCCTCACCGCCCTCCTCGCTaGCTTCGCTTGACTCCAGCTTGTCTTCTTTATTATAGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPHRPPHRPPHRPPR*LRLTPACLLYYRAP Trigger: TGGAGCCCTATAATAAAGAAGACAAGCTGGAGTCAAGCGAAGGCAGCGAGGAGGGCGGTGAGGAGGACGGTGAGGAGGACGGTGAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS GCA 90 bp | AGCACTCCAGTGGGAATCAGTTCTCTGCTTCACCTGGGCTCCATCTaGAGTTTCATCCACCACCTCCACGTCCTCCTCACCGTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STPVGISSLLHLGSI*SFIHHLHVLLTVLL Trigger: GAGGAGGACGGTGAGGAGGACGTGGAGGTGGTGGATGAAACTGCAGATGGAGCCCAGGTGAAGCAGAGAACTGATTCCCACTGGAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS CCA 90 bp | TTGAGAGCGTCTTTCCTGCTGATGCTCACGGCAAGCTCCTGCAGCTaGCAGGCTAGCTTCTCCAGAAGGCTGTGTTCCTCCTCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRASFLLMLTASSCS*QASFSRRLCSSSFL Trigger: GAGGAAGGAGGAGGAACACAGCCTTCTGGAGAAGCTAGCCTGCCAGCTGCAGGAGCTTGCCGTGAGCATCAGCAGGAAAGACGCTCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS TCA 90 bp | AGTGAGCAGAGCACATACTCCCCACCAGGGTTTCTGGCAGCAGACTaGGCATGGCCCTGGACCTCCTGTTCAGAGACCGAAGTTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SEQSTYSPPGFLAAD*AWPWTSCSETEVSP Trigger: TGGTGAAACTTCGGTCTCTGAACAGGAGGTCCAGGGCCATGCTCAGTCTGCTGCCAGAAACCCTGGTGGGGAGTATGTGCTCTGCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS GCA 90 bp | TCAACTTTGAGAGCGTCTTTCCTGCTGATGCTCACGGCAAGCTCCTaGAGCTGGCAGGCTAGCTTCTCCAGAAGGCTGTGTTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STLRASFLLMLTASS*SWQASFSRRLCSSS Trigger: GGAGGAGGAACACAGCCTTCTGGAGAAGCTAGCCTGCCAGCTGCAGGAGCTTGCCGTGAGCATCAGCAGGAAAGACGCTCTCAAAGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS GCA 90 bp | GAAGGCCAGCTGCGATGTCGTGAGCTCTGGCTGCAAGAAGTAACTTaGTCGAAACTGGTTCCCTTCATCCAGCAGCTGGGAGAGCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGQLRCRELWLQEVT*SKLVPFIQQLGERG Trigger: TCCACGCTCTCCCAGCTGCTGGATGAAGGGAACCAGTTTCGAGCAAGTTACTTCTTGCAGCCAGAGCTCACGACATCGCAGCTGGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110357.2 |
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| CDS CCA 90 bp | TTGCTCGAAACTGGTTCCCTGCTTCATCCAGCAGCTGGGAGAGCGTaGAAGGCCGGAATCCTGCAGGAATGGCTCCCATTGTGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLETGSLLHPAAGRA*KAGILQEWLPLWLT Trigger: TGTTAGCCACAATGGGAGCCATTCCTGCAGGATTCCGGCCTTCCACGCTCTCCCAGCTGCTGGATGAAGCAGGGAACCAGTTTCGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028857.14 |
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| CDS CCA 90 bp | AACTTGCTCGAAACTGGTTCCCTTCATCCAGCAGCTGGGAGAGCGTaGAAGGCCGGAATCCTGCAGGAATGGCTCCCATTGTGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: NLLETGSLHPAAGRA*KAGILQEWLPLWLT Trigger: TGTTAGCCACAATGGGAGCCATTCCTGCAGGATTCCGGCCTTCCACGCTCTCCCAGCTGCTGGATGAAGGGAACCAGTTTCGAGCAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110357.2 |
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| CDS TCA 90 bp | TCTCTGCTCGCTTTAGTGTACTTTCTTTCTCAGACCAGGAACTCCTaGGAGCATCCATCACGTCGGGCTGCTCCAGGAGCAGAGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLALVYFLSQTRNS*EHPSRRAAPGAEGR Trigger: CCTTCCCTCTGCTCCTGGAGCAGCCCGACGTGATGGATGCTCTCAGGAGTTCCTGGTCTGAGAAAGAAAGTACACTAAAGCGAGCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS TCA 90 bp | TCAGGACCTTGCTGCCGTCAAACAGGCAGAGGCGGATGTGTCTGCTaGGAACCTGTATGCTTGTTCCTGGGAGAGGGATCATTTTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGPCCRQTGRGGCVC*EPVCLFLGEGSFYS Trigger: GCTGTAAAATGATCCCTCTCCCAGGAACAAGCATACAGGTTCTCAGCAGACACATCCGCCTCTGCCTGTTTGACGGCAGCAAGGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS TCA 90 bp | AAAGGTCTGCTCCGAAAGGTCAAATGGTTTGTGAACTCCATCTGGTaGCAGCAGAGCCTTCAGGGAACCCTCGTTCTCCCGGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KGLLRKVKWFVNSIW*QQSLQGTLVLPALL Trigger: AAGCAGAGCCGGGAGAACGAGGGTTCCCTGAAGGCTCTGCTGTCACCAGATGGAGTTCACAAACCATTTGACCTTTCGGAGCAGACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 90 bp | GTCCATGTTTTTGGCTTCTTAGGCTGCCACACGGCTCGAACTGTATaGATATTACTCAGGACCTTGCTGCCGTCAAACAGGCAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VHVFGFLGCHTARTV*ILLRTLLPSNRQRR Trigger: CCGCCTCTGCCTGTTTGACGGCAGCAAGGTCCTGAGTAATATCCATACAGTTCGAGCCGTGTGGCAGCCTAAGAAGCCAAAAACATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS GCA 90 bp | ACCTCCTGTTCAGAGACCGAAGTTTCACCAGAAGTTGAGGCTGCCTaGGCACACTTATCATCTGACGGAAAACACTGCCCTGTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCSETEVSPEVEAA*AHLSSDGKHCPVLF Trigger: GAAGAGCACAGGGCAGTGTTTTCCGTCAGATGATAAGTGTGCGCAGGCAGCCTCAACTTCTGGTGAAACTTCGGTCTCTGAACAGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS TCA 90 bp | TCACCCAAGAAGTCAAAGGTCTGCTCCGAAAGGTCAAATGGTTTGTaGACTCCATCTGGTGACAGCAGAGCCTTCAGGGAACCCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPKKSKVCSERSNGL*TPSGDSRAFREPSF Trigger: GAACGAGGGTTCCCTGAAGGCTCTGCTGTCACCAGATGGAGTTCACAAACCATTTGACCTTTCGGAGCAGACCTTTGACTTCTTGGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS TCA 90 bp | ATAAAACAGTCACCATCGAGCAAGCATGGCAAGATGCCAGTGACCTaGGGAGAGAAGGTCCATGTTTTTGGCTTCTTAGGCTGCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: IKQSPSSKHGKMPVT*GEKVHVFGFLGCHT Trigger: CGTGTGGCAGCCTAAGAAGCCAAAAACATGGACCTTCTCTCCTCAGGTCACTGGCATCTTGCCATGCTTGCTCGATGGTGACTGTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS CCA 90 bp | GCATGGCAAGATGCCAGTGACCTGAGGAGAGAAGGTCCATGTTTTTaGCTTCTTAGGCTGCCACACGGCTCGAACTGTATGGATATTACT | + |
|
Preference number: 5 (lower is better) Translates to: AWQDASDLRREGPCF*LLRLPHGSNCMDIT Trigger: AGTAATATCCATACAGTTCGAGCCGTGTGGCAGCCTAAGAAGCCAAAAACATGGACCTTCTCTCCTCAGGTCACTGGCATCTTGCCATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS CCA 90 bp | TGCGCACACTTATCATCTGACGGAAAACACTGCCCTGTGCTCTTCTaGACACTGAAGGGTCCACTTCAACACCTTTTTCGTAAGGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CAHLSSDGKHCPVLF*TLKGPLQHLFRKEC Trigger: GCACTCCTTACGAAAAAGGTGTTGAAGTGGACCCTTCAGTGTCCAGAAGAGCACAGGGCAGTGTTTTCCGTCAGATGATAAGTGTGCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CAA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGATTCTCCCGGCTCTGCTaGAGGAAGTCAGCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YVLTSLSLAQLFEASLPGFSRLC*RKSAMA Trigger: AGCCATTGCTGACTTCCTCAAGCAGAGCCGGGAGAA...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS TCA 90 bp | ACTTATCATCTGACGGAAAACACTGCCCTGTGCTCTTCTGGACACTaGAGGGTCCACTTCAACACCTTTTTCGTAAGGAGTGCCGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TYHLTENTALCSSGH*RVHFNTFFVRSAAI Trigger: AATGGCGGCACTCCTTACGAAAAAGGTGTTGAAGTGGACCCTTCAGTGTCCAGAAGAGCACAGGGCAGTGTTTTCCGTCAGATGATAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS GCA 90 bp | TTCTTCATCATCTTCAGTCGTGTCATCTTCCTCCTTGTCACTGTGTaGCTCAACTTTGAGAGCGTCTTTCCTGCTGATGCTCACGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FFIIFSRVIFLLVTV*LNFESVFPADAHGK Trigger: CTTGCCGTGAGCATCAGCAGGAAAGACGCTCTCAAAGTTGAGGCACACAGTGACAAGGAGGAAGATGACACGACTGAAGATGATGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CAA 90 bp | TACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCTTCCTGGAGTGTCATCTTCCTCCTaGTCACTGTGTGCCTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: YVLTSLSLAQLFEASLPGVSSSS*SLCAST Trigger: AGTTGAGGCACACAGTGACAAGGAGGAAGATGACAC...TCCAGGAAGACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CAA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTTTGTTTCGGGGAGGCTaGCTCTTGCTTTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AYDYVLTSLSLAQLFEASLFRGG*LLLSFS Trigger: GGAGAAGGAAAGCAAGAGCAAGCCTCCCCGAAACAA...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CAA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTGCTGCAAGAAGTAACTaGCTCGAAACTGGTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYDYVLTSLSLAQLFEASAARSN*LETGSL Trigger: CAGGGAACCAGTTTCGAGCAAGTTACTTCTTGCAGC...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028857.14 |
||
| CDS-3UTR CAA 90 bp | GCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCAAGTCAATGGCTTTCCATCTaGCAGCCTCTGTCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AYDYVLTSLSLAQLFEASQWLSI*QPLSLP Trigger: AGGAAGAGACAGAGGCTGCAAGATGGAAAGCCATTG...ACTTGCCTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
||
| CDS-3UTR CAA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTCTCCCGGCTCTGCTaGAGGAAGTCAGCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQFSRLC*RKSAMA Trigger: AGCCATTGCTGACTTCCTCAAGCAGAGCCGGGAGAA...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGTTGTTTCGGGGAGGCTaGCTCTTGCTTTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TKAYDYVLTSLSLAQLFELFRGG*LLLSFS Trigger: GGAGAAGGAAAGCAAGAGCAAGCCTCCCCGAAACAA...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGCAGGAATGGCTCCCATaGTGGCTAACACATCAACGG | + |
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Preference number: 5 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQQEWLP*WLTHQR Trigger: CCGTTGATGTGTTAGCCACAATGGGAGCCATTCCTG...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGAAGTTTCACCAGAAGTaGAGGCTGCCTGCGCACACT | + |
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Preference number: 5 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEKFHQK*RLPAHT Trigger: AGTGTGCGCAGGCAGCCTCAACTTCTGGTGAAACTT...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGAAGTTTCACCAGAAGTaGAGGCTGCCTGCGCACACT | + |
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Preference number: 5 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQKFHQK*RLPAHT Trigger: AGTGTGCGCAGGCAGCCTCAACTTCTGGTGAAACTT...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | TATTTGCACACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGGTGTCATCTTCCTCCTaGTCACTGTGTGCCTCAACT | + |
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Preference number: 5 (lower is better) Translates to: YLHTKAYDYVLTSLSLAQVSSSS*SLCAST Trigger: AGTTGAGGCACACAGTGACAAGGAGGAAGATGACAC...CTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGTGTGCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGCAATGGCTTTCCATCTaGCAGCCTCTGTCTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEQWLSI*QPLSLP Trigger: AGGAAGAGACAGAGGCTGCAAGATGGAAAGCCATTG...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGCATATGACTACGTTCTAACCAGTCTGTCTTTGGCTCAGTTGTTTGAGGCTGCAAGAAGTAACTaGCTCGAAACTGGTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: TKAYDYVLTSLSLAQLFEAARSN*LETGSL Trigger: AAGGGAACCAGTTTCGAGCAAGTTACTTCTTGCAGC...CTCAAACAACTGAGCCAAAGACAGACTGGTTAGAACGTAGTCATATGCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110357.2 |
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| CDS GCA 72 bp | AGAGCGTCTTTCCTGCTGATGCTCACGGCAAGCTCCTaGAGCTGGCAGGCTAGCTTCTCCAGAAGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RASFLLMLTASS*SWQASFSRRLC Trigger: ACACAGCCTTCTGGAGAAGCTAGCCTGCCAGCTGCAGGAGCTTGCCGTGAGCATCAGCAGGAAAGACGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 72 bp | TCTTTCCTGCTGATGCTCACGGCAAGCTCCTGCAGCTaGCAGGCTAGCTTCTCCAGAAGGCTGTGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFLLMLTASSCS*QASFSRRLCSS Trigger: GGAGGAACACAGCCTTCTGGAGAAGCTAGCCTGCCAGCTGCAGGAGCTTGCCGTGAGCATCAGCAGGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 72 bp | CTTGCTCGAAACTGGTTCCCTGCTTCATCCAGCAGCTaGGAGAGCGTGGAAGGCCGGAATCCTGCAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: LARNWFPASSSS*ESVEGRNPAGM Trigger: CATTCCTGCAGGATTCCGGCCTTCCACGCTCTCCCAGCTGCTGGATGAAGCAGGGAACCAGTTTCGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028857.14 |
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| CDS TCA 72 bp | GAGCCTTCAGGGAACCCTCGTTCTCCCGGCTCTGCTTaGGGAAGTCAGCAATGGCTTTCCATCTTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EPSGNPRSPGSA*GSQQWLSILQP Trigger: AGGCTGCAAGATGGAAAGCCATTGCTGACTTCCTCAAGCAGAGCCGGGAGAACGAGGGTTCCCTGAAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS GCA 72 bp | GTGGGAATCAGTTCTCTGCTTCACCTGGGCTCCATCTaGAGTTTCATCCACCACCTCCACGTCCTCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: VGISSLLHLGSI*SFIHHLHVLLT Trigger: GGTGAGGAGGACGTGGAGGTGGTGGATGAAACTGCAGATGGAGCCCAGGTGAAGCAGAGAACTGATTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 72 bp | AGAGCCTTCAGGGAACCCTCGTTCTCCCGGCTCTGCTaGAGGAAGTCAGCAATGGCTTTCCATCTTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RAFREPSFSRLC*RKSAMAFHLAA Trigger: GGCTGCAAGATGGAAAGCCATTGCTGACTTCCTCAAGCAGAGCCGGGAGAACGAGGGTTCCCTGAAGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS GCA 72 bp | GCTCTGCTTGAGGAAGTCAGCAATGGCTTTCCATCTTaGAGCCTCTGTCTCTTCCTCGGCCCACCTAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: ALLEEVSNGFPS*SLCLFLGPPKG Trigger: CCCTTTAGGTGGGCCGAGGAAGAGACAGAGGCTGCAAGATGGAAAGCCATTGCTGACTTCCTCAAGCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 90 bp | CATGGCCCTGGACCTCCTGTTCAGAGACCGAAGTTTCACCAGAAGTaGAGGCTGCCTGCGCACACTTATCATCTGACGGAAAACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: HGPGPPVQRPKFHQK*RLPAHTYHLTENTA Trigger: GGCAGTGTTTTCCGTCAGATGATAAGTGTGCGCAGGCAGCCTCAACTTCTGGTGAAACTTCGGTCTCTGAACAGGAGGTCCAGGGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 90 bp | TCTTCAGTCGTGTCATCTTCCTCCTTGTCACTGTGTGCCTCAACTTaGAGAGCGTCTTTCCTGCTGATGCTCACGGCAAGCTCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSVVSSSSLSLCAST*RASFLLMLTASSCS Trigger: GCTGCAGGAGCTTGCCGTGAGCATCAGCAGGAAAGACGCTCTCAAAGTTGAGGCACACAGTGACAAGGAGGAAGATGACACGACTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS TCA 72 bp | GCTTTAGTGTACTTTCTTTCTCAGACCAGGAACTCCTaGGAGCATCCATCACGTCGGGCTGCTCCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALVYFLSQTRNS*EHPSRRAAPGA Trigger: TGCTCCTGGAGCAGCCCGACGTGATGGATGCTCTCAGGAGTTCCTGGTCTGAGAAAGAAAGTACACTAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 72 bp | GTGTCATCTTCCTCCTTGTCACTGTGTGCCTCAACTTaGAGAGCGTCTTTCCTGCTGATGCTCACGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VSSSSLSLCAST*RASFLLMLTAS Trigger: GCTTGCCGTGAGCATCAGCAGGAAAGACGCTCTCAAAGTTGAGGCACACAGTGACAAGGAGGAAGATGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 72 bp | GCGTGGAAGGCCGGAATCCTGCAGGAATGGCTCCCATaGTGGCTAACACATCAACGGTATTTATCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AWKAGILQEWLP*WLTHQRYLSAL Trigger: CAGAGCAGATAAATACCGTTGATGTGTTAGCCACAATGGGAGCCATTCCTGCAGGATTCCGGCCTTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS GCA 72 bp | TCAGAGACCGAAGTTTCACCAGAAGTTGAGGCTGCCTaGGCACACTTATCATCTGACGGAAAACACTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SETEVSPEVEAA*AHLSSDGKHCP Trigger: AGGGCAGTGTTTTCCGTCAGATGATAAGTGTGCGCAGGCAGCCTCAACTTCTGGTGAAACTTCGGTCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 72 bp | ATCTGCTCTGAGATAGCTTTTCGTACAGCACTCCAGTaGGAATCAGTTCTCTGCTTCACCTGGGCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: ICSEIAFRTALQ*ESVLCFTWAPS Trigger: AGATGGAGCCCAGGTGAAGCAGAGAACTGATTCCCACTGGAGTGCTGTACGAAAAGCTATCTCAGAGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 72 bp | TGGAAGGCCGGAATCCTGCAGGAATGGCTCCCATTGTaGCTAACACATCAACGGTATTTATCTGCTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: WKAGILQEWLPL*LTHQRYLSALR Trigger: TCTCAGAGCAGATAAATACCGTTGATGTGTTAGCCACAATGGGAGCCATTCCTGCAGGATTCCGGCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 72 bp | ATTGGACCTGATAAAACAGTCACCATCGAGCAAGCATaGCAAGATGCCAGTGACCTGAGGAGAGAAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: IGPDKTVTIEQA*QDASDLRREGP Trigger: TGGACCTTCTCTCCTCAGGTCACTGGCATCTTGCCATGCTTGCTCGATGGTGACTGTTTTATCAGGTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 72 bp | CCCAAGAGCGATGTATGTGACAGTTTCTGTTTCTGCTaGTTTCGGGGAGGCTTGCTCTTGCTTTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PKSDVCDSFCFC*FRGGLLLLSFS Trigger: GGAGAAGGAAAGCAAGAGCAAGCCTCCCCGAAACAAGCAGAAACAGAAACTGTCACATACATCGCTCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS TCA 72 bp | AAGTCAAAGGTCTGCTCCGAAAGGTCAAATGGTTTGTaGACTCCATCTGGTGACAGCAGAGCCTTCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: KSKVCSERSNGL*TPSGDSRAFRE Trigger: TTCCCTGAAGGCTCTGCTGTCACCAGATGGAGTTCACAAACCATTTGACCTTTCGGAGCAGACCTTTGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS GCA 72 bp | ATCTTCAGTCGTGTCATCTTCCTCCTTGTCACTGTGTaGCTCAACTTTGAGAGCGTCTTTCCTGCTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: IFSRVIFLLVTV*LNFESVFPADA Trigger: AGCATCAGCAGGAAAGACGCTCTCAAAGTTGAGGCACACAGTGACAAGGAGGAAGATGACACGACTGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CCA 72 bp | TCTCTCCTTTTACTCGGTTCCAGAGCACCTGTTAGTTaGCTTTCAGTCACCAAACTATCAACCTGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLLLGSRAPVS*LSVTKLSTCSF Trigger: GAAGCTGCAGGTTGATAGTTTGGTGACTGAAAGCCAACTAACAGGTGCTCTGGAACCGAGTAAAAGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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| CDS CAA 72 bp | TCTTCTTCATCATCTTCAGTCGTGTCATCTTCCTCCTaGTCACTGTGTGCCTCAACTTTGAGAGCGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSVVSSSS*SLCASTLRASF Trigger: GAAAGACGCTCTCAAAGTTGAGGCACACAGTGACAAGGAGGAAGATGACACGACTGAAGATGATGAAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028857.14 ENSMUST00000110357.2 |
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