Pregenerated sensors for NPFFR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035528Ensembl transcript IDs: ENSMUST00000048557.3
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTAAAATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATaGAAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VKMGTVRLLKHFRQT*KSLNISCTISLVRK Trigger: CTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATTTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGTCAGACTATAAGAAGTaGAAAGCCACAACAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SQTFETLQANMKVTEYFMSDYKK*KATTSS Trigger: GCTGCTTGTTGTGGCTTTTCACTTCTTATAGTCTGA...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| 3UTR TCA 72 bp | GGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATaGAAGTCACTGAATATTTCATGTACCATAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GTVRLLKHFRQT*KSLNISCTISL Trigger: CAGGCTTATGGTACATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR TCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAAGACGGAAGCCGCAACTaGTATCCCTTGCACCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEDGSRN*YPLHQP Trigger: GGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCGTC...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATAGCACTGGACGCTGCTTaGCTGTGCAGTGTGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: KSLNISCTISLVRKATFIALDAA*LCSVLP Trigger: CGGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGC...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR TCA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATATCCCCACCTGGGTTTTaGGACACCGGTTCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: KSLNISCTISLVRKATFISPPGF*DTGSCT Trigger: GGTGCAGGAACCGGTGTCTCAAAACCCAGGTGGGGA...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR TCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAAGAAGCCAGGAAAGGATaGAAAGGAGGGCCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEEARKG*KGGPQS Trigger: TGACTGTGGCCCTCCTTTTCATCCTTTCCTGGCTTC...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGCACTGCACTGGACGCTaGTTGCCTGTGCAGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMHCTGR*LPVQCA Trigger: AGCACACTGCACAGGCAAGCAGCGTCCAGTGCAGTG...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGCTTGCCTGTGCAGTGTaGTGCCGTCTTGAAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMLACAV*CRLEEG Trigger: TCCCTCTTCAAGACGGCAGCACACTGCACAGGCAAG...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAAGACACCAGTAGACTGTaGTGGTTTTATTGTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEDTSRL*WFYCGS Trigger: GCTCCCACAATAAAACCAGCACAGTCTACTGGTGTC...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGGTGCTGGTTTTATTGTaGGAGCTGAGTCTCACACGG | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMVLVLL*ELSLTR Trigger: CCGTGTGAGACTCAGCTCCCACAATAAAACCAGCAC...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAAGGCTTGGCTTTCTTTTaGCAGATCTGGAAAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEGLAFF*QIWKAS Trigger: AGATGCTTTCCAGATCTGCCAAAAGAAAGCCAAGCC...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGAGGCTTCCTGGGGCTTaGCTTTCTTTTGGCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMRLPGA*LSFGRS Trigger: AGATCTGCCAAAAGAAAGCCAAGCCCCAGGAAGCCT...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR TCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGTTGCCACTCCAGATGTaGTTCCAGCTTTCTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMLPLQM*FQLSEE Trigger: CTCTTCAGAAAGCTGGAATCACATCTGGAGTGGCAA...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATAGATGCTGTGTATCATTaGCACTCCAGATGTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: KSLNISCTISLVRKATFIDAVYH*HSRCDS Trigger: GGAATCACATCTGGAGTGGCAATGATACACAGCATC...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAACAGTATTTCCCACCATaGACAAGACAAAGATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEQYFPP*TRQRSG Trigger: TCCTGATCTTTGTCTTGTGCATGGTGGGAAATACTG...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGTCCGAATGGCCATCCTaGTATGATGTTGTCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMSEWPS*YDVVQQ Trigger: TTGCTGGACAACATCATAGCAGGATGGCCATTCGGA...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGTCTGTCCACAGCTATTaGAACCAAGGTGAAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMSVHSY*NQGEDG Trigger: TCCGTCTTCACCTTGGTTGCAATAGCTGTGGACAGA...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGCTTGACAGTGAGCTTTaGCTTAAAGGGGTAGACCAC | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMLDSEL*LKGVDH Trigger: GTGGTCTACCCCTTTAAGCCAAAGCTCACTGTCAAG...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR TCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAACATGATAACAATGAGTaGGAGAGGAGCAAGATAGAT | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEHDNNE*ERSKID Trigger: ATCTATCTTGCTCCTCTCTCACTCATTGTTATCATG...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATAGGAAGCCCCAATCCTTaGATACATGATAACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: KSLNISCTISLVRKATFIGSPNP*IHDNNE Trigger: CTCATTGTTATCATGTATGCAAGGATTGGGGCTTCC...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGCCTTCTGTTTCTTCTTaGATACATGCCACTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMPSVSS*IHATAL Trigger: CAGTGCAGTGGCATGTATCCAAGAAGAAACAGAAGG...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATTCTTTTGGCAGATCTaGAAAGCATCTTGGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: NGNSQTFETLQANMKVTEFFWQI*KASWKP Trigger: TGGTTTCCAAGATGCTTTCCAGATCTGCCAAAAGAA...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR TCA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATAGGTAATGTTGATATCTaGATACCAGTGATGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KSLNISCTISLVRKATFIGNVDI*IPVMLC Trigger: ACACAGCATCACTGGTATTCAGATATCAACATTACC...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGATCTGGAAAGCATCTTaGAAACCATTGCGAAAATTT | + |
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Preference number: 4 (lower is better) Translates to: SQTFETLQANMKVTEYFMIWKAS*KPLRKF Trigger: AAATTTTCGCAATGGTTTCCAAGATGCTTTCCAGAT...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 90 bp | TCTGTCCACAGCTATTGCAACCAAGGTGAAGACGGAAGCCGCAACTaGTATCCCTTGCACCAGCCCACTGATCTTGCACATGCTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SVHSYCNQGEDGSRN*YPLHQPTDLAHAAS Trigger: GGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCGTCTTCACCTTGGTTGCAATAGCTGTGGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 90 bp | GCTATTGCAACCAAGGTGAAGACGGAAGCCGCAACTGATATCCCTTaGACCAGCCCACTGATCTTGCACATGCTGCTTCCGAATGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: AIATKVKTEAATDIP*TSPLILHMLLPNGH Trigger: ATGGCCATTCGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCGTCTTCACCTTGGTTGCAATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 90 bp | ACAGTCAGCAGCATCTTGATGACCTTCTGTTTCTTCTTGGATACATaGCACTGCACTGGACGCTGCTTGCCTGTGCAGTGTGCTGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: TVSSILMTFCFFLDT*HCTGRCLPVQCAAV Trigger: GACGGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCATGTATCCAAGAAGAAACAGAAGGTCATCAAGATGCTGCTGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CCA 90 bp | CATCTTGATGACCTTCTGTTTCTTCTTGGATACATGCCACTGCACTaGACGCTGCTTGCCTGTGCAGTGTGCTGCCGTCTTGAAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: HLDDLLFLLGYMPLH*TLLACAVCCRLEEG Trigger: TCCCTCTTCAAGACGGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCATGTATCCAAGAAGAAACAGAAGGTCATCAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CCA 90 bp | TATCCCTTGCACCAGCCCACTGATCTTGCACATGCTGCTTCCGAATaGCCATCCTGCTATGATGTTGTCCAGCAATGTGATAGGCATACA | + |
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Preference number: 5 (lower is better) Translates to: YPLHQPTDLAHAASE*PSCYDVVQQCDRHT Trigger: TGTATGCCTATCACATTGCTGGACAACATCATAGCAGGATGGCCATTCGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CCA 90 bp | CCAGATGATCACAATCGTGACAAAGGCTGTCTTGACAGTGAGCTTTaGCTTAAAGGGGTAGACCACACAGCGGAATCTGTCCACAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: PDDHNRDKGCLDSEL*LKGVDHTAESVHSY Trigger: ATAGCTGTGGACAGATTCCGCTGTGTGGTCTACCCCTTTAAGCCAAAGCTCACTGTCAAGACAGCCTTTGTCACGATTGTGATCATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 90 bp | GATGTTGATGATACGCAGTTTGTTAGGAGACAGGTCAGTATAGTCTaGGAGCATCATCAGGGTCCACAGGGGAAGCCAGGAAAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: DVDDTQFVRRQVSIV*EHHQGPQGKPGKDE Trigger: TTCATCCTTTCCTGGCTTCCCCTGTGGACCCTGATGATGCTCTCAGACTATACTGACCTGTCTCCTAACAAACTGCGTATCATCAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 90 bp | CATGCACAAGACAAAGATCAGGAGGTAGGAGCTGATGAAGACAGCTaGCACTTGGGGCTGGTGGAGATAGTAGTTCACATAGGTAATGTT | + |
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Preference number: 5 (lower is better) Translates to: HAQDKDQEVGADEDS*HLGLVEIVVHIGNV Trigger: AACATTACCTATGTGAACTACTATCTCCACCAGCCCCAAGTGGCAGCTGTCTTCATCAGCTCCTACCTCCTGATCTTTGTCTTGTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGTGCACTGGACGCTGCTaGCCTGTGCAGTGTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SQTFETLQANMKVTEYFMCTGRC*PVQCAA Trigger: GGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGCA...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATAGGGTTGACACTGCTGTaGCAGAAGGCGAGCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: KSLNISCTISLVRKATFIGLTLL*QKASQW Trigger: CCACTGGCTCGCCTTCTGCAACAGCAGTGTCAACCC...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATTCCCCACCTGGGTTTaGAGACACCGGTTCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: NGNSQTFETLQANMKVTEFPTWV*RHRFLH Trigger: GTGCAGGAACCGGTGTCTCAAAACCCAGGTGGGGAA...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAAGAAGACAGCTGCCACTaGGGGCTGGTGGAGATAGTA | + |
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Preference number: 5 (lower is better) Translates to: NGNSQTFETLQANMKVTEEDSCH*GLVEIV Trigger: TACTATCTCCACCAGCCCCAAGTGGCAGCTGTCTTC...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 90 bp | AGTCCTCCCGACACCAGTAGACTGTGCTGGTTTTATTGTGGGAGCTaGGTCTCACACGGTAGTATTTTTCTTCTTGTACATGTAACATTA | + |
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Preference number: 5 (lower is better) Translates to: SPPDTSRLCWFYCGS*VSHGSIFLLVHVTL Trigger: TAATGTTACATGTACAAGAAGAAAAATACTACCGTGTGAGACTCAGCTCCCACAATAAAACCAGCACAGTCTACTGGTGTCGGGAGGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 90 bp | TTGGGGCTGGTGGAGATAGTAGTTCACATAGGTAATGTTGATATCTaGATACCAGTGATGCTGTGTATCATTGCCACTCCAGATGTGATT | + |
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Preference number: 5 (lower is better) Translates to: LGLVEIVVHIGNVDI*IPVMLCIIATPDVI Trigger: AATCACATCTGGAGTGGCAATGATACACAGCATCACTGGTATTCAGATATCAACATTACCTATGTGAACTACTATCTCCACCAGCCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGGGGCTTGGCTTTCTTTaGGCAGATCTGGAAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: SQTFETLQANMKVTEYFMGLGFL*ADLESI Trigger: GATGCTTTCCAGATCTGCCAAAAGAAAGCCAAGCCC...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AATGGGAACAGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAAGATTCCTGTGTGGGATaGTCTGCACTTTTTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: NGNSQTFETLQANMKVTEDSCVG*SALFPH Trigger: ATGTGGAAAAAGTGCAGACAATCCCACACAGGAATC...TTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACTGTTCCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGGTGACAAAGGCTGTCTaGACAGTGAGCTTTGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: SQTFETLQANMKVTEYFMVTKAV*TVSFGL Trigger: TAAGCCAAAGCTCACTGTCAAGACAGCCTTTGTCAC...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AAGTCACTGAATATTTCATGTACCATAAGCCTGGTTAGAAAGGCCACTTTCATAACAGTCAGCAGCATCTaGATGACCTTCTGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KSLNISCTISLVRKATFITVSSI*MTFCFF Trigger: GAAGAAACAGAAGGTCATCAAGATGCTGCTGACTGT...TATGAAAGTGGCCTTTCTAACCAGGCTTATGGTACATGAAATATTCAGTGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGAGCTTTCTGAAGAGTTaGAGTCCCATTTCTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SQTFETLQANMKVTEYFMSFLKS*SPISRS Trigger: TGAGCGAGAAATGGGACTCAAACTCTTCAGAAAGCT...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGACTTTTGAAACACTTCAGGCAAACATGAAAGTCACTGAATATTTCATGGATCTGGAAAGCATCTaGGAAACCATTGCGAAAATT | + |
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Preference number: 5 (lower is better) Translates to: SQTFETLQANMKVTEYFMDLESI*ETIAKI Trigger: AATTTTCGCAATGGTTTCCAAGATGCTTTCCAGATC...CATGAAATATTCAGTGACTTTCATGTTTGCCTGAAGTGTTTCAAAAGTCTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 72 bp | ATGCCACTGCACTGGACGCTGCTTGCCTGTGCAGTGTaGTGCCGTCTTGAAGAGGGAAGCCCCAATCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: MPLHWTLLACAV*CRLEEGSPNPC Trigger: GCAAGGATTGGGGCTTCCCTCTTCAAGACGGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 72 bp | CGGAAGCCGCAACTGATATCCCTTGCACCAGCCCACTaGTCTTGCACATGCTGCTTCCGAATGGCCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: RKPQLISLAPAH*SCTCCFRMAIL Trigger: CAGGATGGCCATTCGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 72 bp | ACCAAGGTGAAGACGGAAGCCGCAACTGATATCCCTTaGACCAGCCCACTGATCTTGCACATGCTGCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: TKVKTEAATDIP*TSPLILHMLLP Trigger: CGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCGTCTTCACCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 72 bp | GCCGCAACTGATATCCCTTGCACCAGCCCACTGATCTaGCACATGCTGCTTCCGAATGGCCATCCTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: AATDIPCTSPLI*HMLLPNGHPAM Trigger: CATAGCAGGATGGCCATTCGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 72 bp | TGTTTCTTCTTGGATACATGCCACTGCACTGGACGCTaGTTGCCTGTGCAGTGTGCTGCCGTCTTGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CFFLDTCHCTGR*LPVQCAAVLKR Trigger: CCTCTTCAAGACGGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCATGTATCCAAGAAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 72 bp | ATAGCACCGTGGTATAGATCCTCCTCATTTCGTGTCTaGGCCAGTCCTCCCGACACCAGTAGACTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IAPWYRSSSFRV*ASPPDTSRLCW Trigger: CCAGCACAGTCTACTGGTGTCGGGAGGACTGGCCAAGACACGAAATGAGGAGGATCTATACCACGGTGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 72 bp | ACTGGACGCTGCTTGCCTGTGCAGTGTGCTGCCGTCTaGAAGAGGGAAGCCCCAATCCTTGCATACATGATA | + |
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Preference number: 6 (lower is better) Translates to: TGRCLPVQCAAV*KREAPILAYMI Trigger: TATCATGTATGCAAGGATTGGGGCTTCCCTCTTCAAGACGGCAGCACACTGCACAGGCAAGCAGCGTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 72 bp | TTCTTCTTGGATACATGCCACTGCACTGGACGCTGCTaGCCTGTGCAGTGTGCTGCCGTCTTGAAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: FFLDTCHCTGRC*PVQCAAVLKRE Trigger: TTCCCTCTTCAAGACGGCAGCACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCATGTATCCAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 90 bp | AAGACGGAAGCCGCAACTGATATCCCTTGCACCAGCCCACTGATCTaGCACATGCTGCTTCCGAATGGCCATCCTGCTATGATGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: KTEAATDIPCTSPLI*HMLLPNGHPAMMLS Trigger: GGACAACATCATAGCAGGATGGCCATTCGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 90 bp | AGGAGGGCCACAGTCAGCAGCATCTTGATGACCTTCTGTTTCTTCTaGGATACATGCCACTGCACTGGACGCTGCTTGCCTGTGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RRATVSSILMTFCFF*DTCHCTGRCLPVQC Trigger: ACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCATGTATCCAAGAAGAAACAGAAGGTCATCAAGATGCTGCTGACTGTGGCCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 72 bp | AGCTATTGCAACCAAGGTGAAGACGGAAGCCGCAACTaGTATCCCTTGCACCAGCCCACTGATCTTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: SYCNQGEDGSRN*YPLHQPTDLAH Trigger: ATGTGCAAGATCAGTGGGCTGGTGCAAGGGATATCAGTTGCGGCTTCCGTCTTCACCTTGGTTGCAATAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 72 bp | GATACGCAGTTTGTTAGGAGACAGGTCAGTATAGTCTaGGAGCATCATCAGGGTCCACAGGGGAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: DTQFVRRQVSIV*EHHQGPQGKPG Trigger: TCCTGGCTTCCCCTGTGGACCCTGATGATGCTCTCAGACTATACTGACCTGTCTCCTAACAAACTGCGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CCA 72 bp | CACCAGCCCACTGATCTTGCACATGCTGCTTCCGAATaGCCATCCTGCTATGATGTTGTCCAGCAATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HQPTDLAHAASE*PSCYDVVQQCD Trigger: ATCACATTGCTGGACAACATCATAGCAGGATGGCCATTCGGAAGCAGCATGTGCAAGATCAGTGGGCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 90 bp | TGGTGGCAAATAGCACCGTGGTATAGATCCTCCTCATTTCGTGTCTaGGCCAGTCCTCCCGACACCAGTAGACTGTGCTGGTTTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: WWQIAPWYRSSSFRV*ASPPDTSRLCWFYC Trigger: ACAATAAAACCAGCACAGTCTACTGGTGTCGGGAGGACTGGCCAAGACACGAAATGAGGAGGATCTATACCACGGTGCTATTTGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 90 bp | GGAAGCCAGGAAAGGATGAAAAGGAGGGCCACAGTCAGCAGCATCTaGATGACCTTCTGTTTCTTCTTGGATACATGCCACTGCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSQERMKRRATVSSI*MTFCFFLDTCHCTG Trigger: TCCAGTGCAGTGGCATGTATCCAAGAAGAAACAGAAGGTCATCAAGATGCTGCTGACTGTGGCCCTCCTTTTCATCCTTTCCTGGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS GCA 72 bp | AGCATCTTGATGACCTTCTGTTTCTTCTTGGATACATaGCACTGCACTGGACGCTGCTTGCCTGTGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SILMTFCFFLDT*HCTGRCLPVQC Trigger: ACACTGCACAGGCAAGCAGCGTCCAGTGCAGTGGCATGTATCCAAGAAGAAACAGAAGGTCATCAAGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CCA 72 bp | CACAATCGTGACAAAGGCTGTCTTGACAGTGAGCTTTaGCTTAAAGGGGTAGACCACACAGCGGAATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HNRDKGCLDSEL*LKGVDHTAESV Trigger: GACAGATTCCGCTGTGTGGTCTACCCCTTTAAGCCAAAGCTCACTGTCAAGACAGCCTTTGTCACGATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CCA 72 bp | AGAGAGGAGCAAGATAGATGGTGGCAAATAGCACCGTaGTATAGATCCTCCTCATTTCGTGTCTTGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: REEQDRWWQIAP*YRSSSFRVLAS Trigger: ACTGGCCAAGACACGAAATGAGGAGGATCTATACCACGGTGCTATTTGCCACCATCTATCTTGCTCCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 90 bp | CAAGACAAAGATCAGGAGGTAGGAGCTGATGAAGACAGCTGCCACTaGGGGCTGGTGGAGATAGTAGTTCACATAGGTAATGTTGATATC | + |
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Preference number: 6 (lower is better) Translates to: QDKDQEVGADEDSCH*GLVEIVVHIGNVDI Trigger: GATATCAACATTACCTATGTGAACTACTATCTCCACCAGCCCCAAGTGGCAGCTGTCTTCATCAGCTCCTACCTCCTGATCTTTGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 72 bp | GAAAGGATGAAAAGGAGGGCCACAGTCAGCAGCATCTaGATGACCTTCTGTTTCTTCTTGGATACATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ERMKRRATVSSI*MTFCFFLDTCH Trigger: GTGGCATGTATCCAAGAAGAAACAGAAGGTCATCAAGATGCTGCTGACTGTGGCCCTCCTTTTCATCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS CAA 90 bp | CTGATCTTGCACATGCTGCTTCCGAATGGCCATCCTGCTATGATGTaGTCCAGCAATGTGATAGGCATACAGAATATTCCAACCAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LILHMLLPNGHPAMM*SSNVIGIQNIPTSK Trigger: TTTACTGGTTGGAATATTCTGTATGCCTATCACATTGCTGGACAACATCATAGCAGGATGGCCATTCGGAAGCAGCATGTGCAAGATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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| CDS TCA 72 bp | GACACCAGTAGACTGTGCTGGTTTTATTGTGGGAGCTaGGTCTCACACGGTAGTATTTTTCTTCTTGTACAT | + |
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Preference number: 6 (lower is better) Translates to: DTSRLCWFYCGS*VSHGSIFLLVH Trigger: ATGTACAAGAAGAAAAATACTACCGTGTGAGACTCAGCTCCCACAATAAAACCAGCACAGTCTACTGGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048557.3 |
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