Pregenerated sensors for NPFFR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020090Ensembl transcript IDs: ENSMUST00000020287.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGGGGCAAGCCATTTCCTCACCTCCTGGGGAGAAGCTGTGCTCTaGCAAGGTGACTGTACGATGAGAGCTGTGCGTCTGACGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: AGASHFLTSWGEAVL*QGDCTMRAVRLTAD Trigger: ATCTGCCGTCAGACGCACAGCTCTCATCGTACAGTCACCTTGGCAGAGCACAGCTTCTCCCCAGGAGGTGAGGAAATGGCTTGCCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | AAGTGGCAGGAGAAACCGGCAGGGGCAAGCCATTTCCTCACCTCCTaGGGAGAAGCTGTGCTCTGCCAAGGTGACTGTACGATGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: KWQEKPAGASHFLTS*GEAVLCQGDCTMRA Trigger: AGCTCTCATCGTACAGTCACCTTGGCAGAGCACAGCTTCTCCCCAGGAGGTGAGGAAATGGCTTGCCCCTGCCGGTTTCTCCTGCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 90 bp | AAGCCATTTCCTCACCTCCTGGGGAGAAGCTGTGCTCTGCCAAGGTaGCTGTACGATGAGAGCTGTGCGTCTGACGGCAGATATACCGGG | + |
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Preference number: 1 (lower is better) Translates to: KPFPHLLGRSCALPR*LYDESCASDGRYTG Trigger: CCCGGTATATCTGCCGTCAGACGCACAGCTCTCATCGTACAGTCACCTTGGCAGAGCACAGCTTCTCCCCAGGAGGTGAGGAAATGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 90 bp | GCAGACTGTAACTCCCACAGTCCCCAGGAGTCTCAGGGACAGGGTTaGCACTGTCCTTGCTGTGGCCTAATTTTAGAGCCCGGGAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: ADCNSHSPQESQGQG*HCPCCGLILEPGSH Trigger: GTGACTCCCGGGCTCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGGGGACTGTGGGAGTTACAGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | ACAGGGATGGCCACCTGTGTCAGGTGCCCTGCTTTTTGCCAACCATaGCCTCTCAAAGCAAGGCGTTTGGGGAAACTGAAGCAGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: TGMATCVRCPAFCQP*PLKARRLGKLKQRP Trigger: AGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCATCCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR GCA 90 bp | TCTGTCAAGATGATGGCAGGCATCGTGGGTGAGCGCTGTCGTGCATaGAGGCTCTCCTACTCTCCTCTGCGTTCAGGGTTCATAAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SVKMMAGIVGERCRA*RLSYSPLRSGFISH Trigger: GTGACTTATGAACCCTGAACGCAGAGGAGAGTAGGAGAGCCTGCATGCACGACAGCGCTCACCCACGATGCCTGCCATCATCTTGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | CAGTCCCCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTaGCCTAATTTTAGAGCCCGGGAGTCACAAGCCTTCTCGGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: QSPGVSGTGLTLSLL*PNFRARESQAFSVN Trigger: GTTTACCGAGAAGGCTTGTGACTCCCGGGCTCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGGGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR GCA 90 bp | GCTCTGGCTGGAGGTCACAAGGCCAACATAATGCAGATGGTTTCCTaGCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAGTTCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: ALAGGHKANIMQMVS*PSPRTWSHSLEFLL Trigger: GAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGGCAGGAAACCATCTGCATTATGTTGGCCTTGTGACCTCCAGCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR GCA 90 bp | TTGTCAGTACTCAGACCAAGCCCATGGGCAGGCAGGTGCCACTTCTaGTCCTACTCAAGTAAGGACAAGGATGATTCACAGGGATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSVLRPSPWAGRCHF*SYSSKDKDDSQGWP Trigger: TGGCCATCCCTGTGAATCATCCTTGTCCTTACTTGAGTAGGAGCAGAAGTGGCACCTGCCTGCCCATGGGCTTGGTCTGAGTACTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 90 bp | AGGATTTCTGAGGAGAGCTGTGATTTTGTCTCTAAGAGGCCATGCTaGAGGCCAGAGCAGAGAGCAGACTGTAACTCCCACAGTCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RISEESCDFVSKRPC*RPEQRADCNSHSPQ Trigger: CTGGGGACTGTGGGAGTTACAGTCTGCTCTCTGCTCTGGCCTTCAGCATGGCCTCTTAGAGACAAAATCACAGCTCTCCTCAGAAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | CCTCTTCCTAACCACCTAGTGACACATTTTCCTGGGGAGACTTACTaGAGTCTGGGTCAAGTAGGATTCCCAACGGTGAGACCTTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PLPNHLVTHFPGETY*SLGQVGFPTVRPCH Trigger: GTGACAAGGTCTCACCGTTGGGAATCCTACTTGACCCAGACTCCAGTAAGTCTCCCCAGGAAAATGTGTCACTAGGTGGTTAGGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR GCA 90 bp | GAGCAGTCAGTGTTCTTAACCGCCGAGCCATCTCTCCAGCCCCACTaGTGGCTTTTCTATAGCATTGTGATGTTCTTGTCAGTACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: EQSVFLTAEPSLQPH*WLFYSIVMFLSVLR Trigger: TCTGAGTACTGACAAGAACATCACAATGCTATAGAAAAGCCAGCAGTGGGGCTGGAGAGATGGCTCGGCGGTTAAGAACACTGACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | TGGCCTCTCAAAGCAAGGCGTTTGGGGAAACTGAAGCAGAGGCCTTaGTGGACAGGATTTCTGAGGAGAGCTGTGATTTTGTCTCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: WPLKARRLGKLKQRP*WTGFLRRAVILSLR Trigger: TCTTAGAGACAAAATCACAGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGCTTTGAGAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | CAGTCAGTGTTCTTAACCGCCGAGCCATCTCTCCAGCCCCACTGCTaGCTTTTCTATAGCATTGTGATGTTCTTGTCAGTACTCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: QSVFLTAEPSLQPHC*LFYSIVMFLSVLRP Trigger: TGGTCTGAGTACTGACAAGAACATCACAATGCTATAGAAAAGCCAGCAGTGGGGCTGGAGAGATGGCTCGGCGGTTAAGAACACTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CCA 90 bp | CCCAGTAAACAAAGAAGAAATGCCCCGACAAAGGTTCATGCTCACTaGCCCACTAAGATATTTCCTGAGGGGAGAGTTGGCATTGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: PSKQRRNAPTKVHAH*PTKIFPEGRVGIAV Trigger: GACAGCAATGCCAACTCTCCCCTCAGGAAATATCTTAGTGGGCCAGTGAGCATGAACCTTTGTCGGGGCATTTCTTCTTTGTTTACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 90 bp | CATTTAAATGGGCTCCCTAGGGTTCTTCTTGGAGCTGCTCAGTTGTaGCATGCTGAAGTGGGTATGGCACTTCCTGGAATAAAACAACTC | + |
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Preference number: 1 (lower is better) Translates to: HLNGLPRVLLGAAQL*HAEVGMALPGIKQL Trigger: GAGTTGTTTTATTCCAGGAAGTGCCATACCCACTTCAGCATGTCACAACTGAGCAGCTCCAAGAAGAACCCTAGGGAGCCCATTTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCACCTGTGTCAGGTGCCCTGCTTTTTGCCAACCATGGCCTCTCAAAGCACTGTCTGTGGCCCTGTaGCCCTGGTCCTACTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: MATCVRCPAFCQPWPLKALSVAL*PWSYWA Trigger: GGCCCAGTAGGACCAGGGTCACAGGGCCACAGACAG...TGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 90 bp | CTCCCACAGTCCCCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTaGCTGTGGCCTAATTTTAGAGCCCGGGAGTCACAAGCCTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: LPQSPGVSGTGLTLS*LWPNFRARESQAFS Trigger: CGAGAAGGCTTGTGACTCCCGGGCTCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGGGGACTGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCGCTCCTTGCCTGCCACCCATaGGCTCTTGGTACTGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PQPQNLESFLGVPSHPALLACHP*ALGTVG Trigger: TCCAACAGTACCAAGAGCTCATGGGTGGCAGGCAAG...GAGCGCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATGTTCTTGTCAGTACTCAGACCAAGCCCATGGGCAGGCAGGTGCCACTTCAGAGCCCTGGACCCTTaGAATGTCCCCCGCCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: VMFLSVLRPSPWAGRCHFRALDP*NVPRPF Trigger: AAAGGGGCGGGGGACATTTCAAGGGTCCAGGGCTCT...GAAGTGGCACCTGCCTGCCCATGGGCTTGGTCTGAGTACTGACAAGAACATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | TACACCAATCACTCCCAGCCTCCTCGCAGACTACACAGCACCTGGAGGGAGCTTGAGCGCTGTCGTGCATaGAGGCTCTCCTACTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: YTNHSQPPRRLHSTWRELERCRA*RLSYSP Trigger: AGGAGAGTAGGAGAGCCTGCATGCACGACAGCGCTC...AAGCTCCCTCCAGGTGCTGTGTAGTCTGCGAGGAGGCTGGGAGTGATTGGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCACAGTCCCCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTGCATTTCCTCACCTCCTaGGGAGAAGCTGTGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TPTVPRSLRDRVDTVLAVHFLTS*GEAVLC Trigger: GCAGAGCACAGCTTCTCCCCAGGAGGTGAGGAAATG...CACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGGGGACTGTGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCTCTTCCTTTTCCCCTTaGCTGCCACCCATGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PAPAPELGVIPWSSFSSGSSFSP*LPPMSS Trigger: AGAGCTCATGGGTGGCAGGCAAGGGGAAAAGGAAGA...GCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 90 bp | AGGTGCCCTGCTTTTTGCCAACCATGGCCTCTCAAAGCAAGGCGTTaGGGGAAACTGAAGCAGAGGCCTTGGTGGACAGGATTTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RCPAFCQPWPLKARR*GKLKQRPWWTGFLR Trigger: CCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR TCA 90 bp | TACTCAAGTAAGGACAAGGATGATTCACAGGGATGGCCACCTGTGTCAGGTGCCCACCTGGAGGGAGCTTaGCAGCTTCCTCAGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: YSSKDKDDSQGWPPVSGAHLEGA*QLPQHR Trigger: CCTATGCTGAGGAAGCTGTCAAGCTCCCTCCAGGTG...GGCACCTGACACAGGTGGCCATCCCTGTGAATCATCCTTGTCCTTACTTGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCACCTGTGTCAGGTGCCCTGCTTTTTGCCAACCATGGCCTCTCAAAGCAGAGAGCTGGGGTGCATaGATCTGTCAAGATGATGGC | + |
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Preference number: 2 (lower is better) Translates to: MATCVRCPAFCQPWPLKAESWGA*ICQDDG Trigger: GCCATCATCTTGACAGATGCATGCACCCCAGCTCTC...TGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTTGGGGAAACTGAAGCAGAGGCCTTGGTGGACAGGATTTCTGAGGAGAGCTATGCAGATGGTTTCCTaGCCCAGCCCCAGAACTTGG | + |
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Preference number: 2 (lower is better) Translates to: RLGKLKQRPWWTGFLRRAMQMVS*PSPRTW Trigger: CCAAGTTCTGGGGCTGGGGCAGGAAACCATCTGCAT...AGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTGGCCTAATTTTAGACAACTTAGAGGGCCTTaGAGAGGACCAGTTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGVSGTGLTLSLLWPNFRQLRGP*RGPVQA Trigger: GGCCTGAACTGGTCCTCTGCAAGGCCCTCTAAGTTG...TCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGCTTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGACTTGTCACCTCTCCCTaGGTCTCAATGCCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: HCLGQTWEQQRASQSVLRLVTSP*VSMPHC Trigger: ACAGTGAGGCATTGAGACCCAGGGAGAGGTGACAAG...TCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAAGCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTTGGGGAAACTGAAGCAGAGGCCTTGGTGGACAGGATTTCTGAGGAGAGCTCCACCCATGAGCTCTTaGTACTGTTGGAAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RLGKLKQRPWWTGFLRRAPPMSS*YCWKLC Trigger: GCAGAGCTTCCAACAGTACCAAGAGCTCATGGGTGG...AGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 90 bp | AAGCAGAGGCCTTGGTGGACAGGATTTCTGAGGAGAGCTGTGATTTaGTCTCTAAGAGGCCATGCTGAAGGCCAGAGCAGAGAGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: KQRPWWTGFLRRAVI*SLRGHAEGQSREQT Trigger: AGTCTGCTCTCTGCTCTGGCCTTCAGCATGGCCTCTTAGAGACAAAATCACAGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | TACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCAGTGTCCATGGGCAGGCAGGTaGCACTTCTGCTCCTACTCA | + |
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Preference number: 2 (lower is better) Translates to: YHVVAGIGAQNLQKSSQCPWAGR*HFCSYS Trigger: TGAGTAGGAGCAGAAGTGGCACCTGCCTGCCCATGG...ACACTGACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTTGGGGAAACTGAAGCAGAGGCCTTGGTGGACAGGATTTCTGAGGAGAGCTAGTTCAGGCCACATCTaGCCTGACTACACCAATCAC | + |
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Preference number: 2 (lower is better) Translates to: RLGKLKQRPWWTGFLRRASSGHI*PDYTNH Trigger: GTGATTGGTGTAGTCAGGCCAGATGTGGCCTGAACT...AGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR TCA 90 bp | GTGACCCTGGTCCTACTGGGCCTCGGTTGCTCTGTGAAACAGCCAGAACATTTTTTAAGTGCACATGATTaGAGTGGCAGGAGAAACCGG | + |
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Preference number: 2 (lower is better) Translates to: VTLVLLGLGCSVKQPEHFLSAHD*SGRRNR Trigger: CCGGTTTCTCCTGCCACTTCAATCATGTGCACTTAA...AAAATGTTCTGGCTGTTTCACAGAGCAACCGAGGCCCAGTAGGACCAGGGTCAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR GCA 90 bp | TACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCAGTGTGCCACCTGTGTCAGGTaGCCTGCTTTTTGCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: YHVVAGIGAQNLQKSSQCATCVR*PAFCQP Trigger: TGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGC...ACACTGACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACGTGTACAACCAACCGTGAGGCCATTTCTTCTGCTGCTATAGACATTGCTGGCAAGCGGAGAGCTTaGATGTTTCCCAGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: WTCTTNREAISSAAIDIAGKRRA*MFPRKG Trigger: CCCTTTCCTGGGAAACATCCAAGCTCTCCGCTTGCC...AGCAATGTCTATAGCAGCAGAAGAAATGGCCTCACGGTTGGTTGTACACGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGCTTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGAAGTGACACATTTTCCTaGGGAGACTTACTGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: HCLGQTWEQQRASQSVLRSDTFS*GDLLES Trigger: AGACTCCAGTAAGTCTCCCCAGGAAAATGTGTCACT...TCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAAGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCTACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCTTGGAGTCATTCCTTaGAGTTCCTTCTCATCCGGC | + |
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Preference number: 2 (lower is better) Translates to: MSYHVVAGIGAQNLQKSSLGVIP*SSFSSG Trigger: GCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAG...ACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTAGCTCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | TACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCAGTGTTGTGACATGCTGAAGTaGGTATGGCACTTCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YHVVAGIGAQNLQKSSQCCDMLK*VWHFLE Trigger: TTCCAGGAAGTGCCATACCCACTTCAGCATGTCACA...ACACTGACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCCAGTTAAGTGCACATaGTTGAAGTGGCAGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MSYHVVAGIGAQNLQKSSPVKCT*LKWQEK Trigger: TTTCTCCTGCCACTTCAATCATGTGCACTTAACTGG...ACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTAGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTGGCCTAATTTTAGAGGGTATGGCACTTCCTaGAATAAAACAACTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: PGVSGTGLTLSLLWPNFRGYGTS*NKTTQT Trigger: TGTTTGAGTTGTTTTATTCCAGGAAGTGCCATACCC...TCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACAGCCAGAACATTTTATGAGTCAGATGACAGTGTTCAGAGACCTGCTTGGAAGGTTCATGCTCACTaGCCCACTAAGATATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ETARTFYESDDSVQRPAWKVHAH*PTKIFP Trigger: AGGAAATATCTTAGTGGGCCAGTGAGCATGAACCTT...CCAAGCAGGTCTCTGAACACTGTCATCTGACTCATAAAATGTTCTGGCTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 72 bp | CCTCACCTCCTGGGGAGAAGCTGTGCTCTGCCAAGGTaGCTGTACGATGAGAGCTGTGCGTCTGACGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PHLLGRSCALPR*LYDESCASDGR Trigger: TCTGCCGTCAGACGCACAGCTCTCATCGTACAGTCACCTTGGCAGAGCACAGCTTCTCCCCAGGAGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 72 bp | GGCCTTGCAGAGGACCAGTTCAGGCCACATCTGGCCTaGCTACACCAATCACTCCCAGCCTCCTCGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: GLAEDQFRPHLA*LHQSLPASSQT Trigger: AGTCTGCGAGGAGGCTGGGAGTGATTGGTGTAGTCAGGCCAGATGTGGCCTGAACTGGTCCTCTGCAAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR GCA 72 bp | ATGATGGCAGGCATCGTGGGTGAGCGCTGTCGTGCATaGAGGCTCTCCTACTCTCCTCTGCGTTCAGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: MMAGIVGERCRA*RLSYSPLRSGF Trigger: GAACCCTGAACGCAGAGGAGAGTAGGAGAGCCTGCATGCACGACAGCGCTCACCCACGATGCCTGCCATCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCGCTCGTCTTCCTTTTCCCCTaGCCTGCCACCCATGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PQPQNLESFLGVPSHPALVFLFP*PATHEL Trigger: GAGCTCATGGGTGGCAGGCAAGGGGAAAAGGAAGAC...GAGCGCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR TCA 72 bp | GCATGCATCTGTCAAGATGATGGCAGGCATCGTGGGTaGGCGCTGTCGTGCATGCAGGCTCTCCTACTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ACICQDDGRHRG*ALSCMQALLLS Trigger: GGAGAGTAGGAGAGCCTGCATGCACGACAGCGCTCACCCACGATGCCTGCCATCATCTTGACAGATGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | ACAGGGATGGCCACCTGTGTCAGGTGCCCTGCTTTTTaGCAACCATGGCCTCTCAAAGCAAGGCGTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TGMATCVRCPAF*QPWPLKARRLG Trigger: CCCCAAACGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCATCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | AGCCATTTCCTCACCTCCTGGGGAGAAGCTGTGCTCTaGCAAGGTGACTGTACGATGAGAGCTGTGCGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SHFLTSWGEAVL*QGDCTMRAVRL Trigger: CAGACGCACAGCTCTCATCGTACAGTCACCTTGGCAGAGCACAGCTTCTCCCCAGGAGGTGAGGAAATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | AACAACTCAAACACTGGCCCTGGCAAGCGGAGAGCTTaGATGTTTCCCAGGAAAGGGCCAAGGGGAGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NNSNTGPGKRRA*MFPRKGPRGAL Trigger: GAGAGCTCCCCTTGGCCCTTTCCTGGGAAACATCCAAGCTCTCCGCTTGCCAGGGCCAGTGTTTGAGTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR TCA 72 bp | AACTCCCACAGTCCCCAGGAGTCTCAGGGACAGGGTTaGCACTGTCCTTGCTGTGGCCTAATTTTAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NSHSPQESQGQG*HCPCCGLILEP Trigger: GGGCTCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGGGGACTGTGGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | CTCTCAGCAACACAGCACAGGGGACTCGGTCACAGGTaGTCAGTGTGTAGAAGTGGTCACCTCTTCCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: LSATQHRGLGHR*SVCRSGHLFLT Trigger: GGTTAGGAAGAGGTGACCACTTCTACACACTGAGCACCTGTGACCGAGTCCCCTGTGCTGTGTTGCTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | ATGATTCACAGGGATGGCCACCTGTGTCAGGTGCCCTaGTTTTTGCCAACCATGGCCTCTCAAAGCAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: MIHRDGHLCQVP*FLPTMASQSKA Trigger: CGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCATCCCTGTGAATCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | GGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTaGCCTAATTTTAGAGCCCGGGAGTCACAAGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GVSGTGLTLSLL*PNFRARESQAF Trigger: GAAGGCTTGTGACTCCCGGGCTCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | GCCACCTGTGTCAGGTGCCCTGCTTTTTGCCAACCATaGCCTCTCAAAGCAAGGCGTTTGGGGAAACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ATCVRCPAFCQP*PLKARRLGKLK Trigger: CTTCAGTTTCCCCAAACGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGGAGCTGCTCAGTTGTGACATGCTGAAGTGGGTATGGCACTTCCTGGAACCCAACGGTGAGACCTaGTCACCTCTCCCTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLELLSCDMLKWVWHFLEPNGET*SPLPGS Trigger: AGACCCAGGGAGAGGTGACAAGGTCTCACCGTTGGG...TTCCAGGAAGTGCCATACCCACTTCAGCATGTCACAACTGAGCAGCTCCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | GGAGGTCACAAGGCCAACATAATGCAGATGGTTTCCTaGCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGHKANIMQMVS*PSPRTWSHSLE Trigger: CTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGGCAGGAAACCATCTGCATTATGTTGGCCTTGTGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | CTCAGACCAAGCCCATGGGCAGGCAGGTGCCACTTCTaGTCCTACTCAAGTAAGGACAAGGATGATTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRPSPWAGRCHF*SYSSKDKDDSQ Trigger: CTGTGAATCATCCTTGTCCTTACTTGAGTAGGAGCAGAAGTGGCACCTGCCTGCCCATGGGCTTGGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | ATAATGCAGATGGTTTCCTGCCCCAGCCCCAGAACTTaGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: IMQMVSCPSPRT*SHSLEFLLIRR Trigger: GCGCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGGCAGGAAACCATCTGCATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR TCA 72 bp | GGGCTCCCTAGGGTTCTTCTTGGAGCTGCTCAGTTGTaGCATGCTGAAGTGGGTATGGCACTTCCTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: GLPRVLLGAAQL*HAEVGMALPGI Trigger: TATTCCAGGAAGTGCCATACCCACTTCAGCATGTCACAACTGAGCAGCTCCAAGAAGAACCCTAGGGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | CATGTGATACTAAGACAGCACCAACTTAGAGGGCCTTaGAGAGGACCAGTTCAGGCCACATCTGGCCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: HVILRQHQLRGP*RGPVQATSGLT Trigger: AGTCAGGCCAGATGTGGCCTGAACTGGTCCTCTGCAAGGCCCTCTAAGTTGGTGCTGTCTTAGTATCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR GCA 72 bp | TTGTCAGTACTCAGACCAAGCCCATGGGCAGGCAGGTaGCACTTCTGCTCCTACTCAAGTAAGGACAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSVLRPSPWAGR*HFCSYSSKDKD Trigger: ATCCTTGTCCTTACTTGAGTAGGAGCAGAAGTGGCACCTGCCTGCCCATGGGCTTGGTCTGAGTACTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTGGGGAAACTGAAGCAGAGGCCTTGGTGGACAGGATTTCTGAGGAGAGCTTTCCTGAGGGGAGAGTaGGCATTGCTGTCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLGKLKQRPWWTGFLRRAFLRGE*ALLSSF Trigger: AAAGGAAGACAGCAATGCCAACTCTCCCCTCAGGAA...AGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR TCA 72 bp | TGGAAGCGAGAATGTGTCCAGTTAAGTGCACATGATTaGAGTGGCAGGAGAAACCGGCAGGGGCAAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: WKRECVQLSAHD*SGRRNRQGQAI Trigger: AATGGCTTGCCCCTGCCGGTTTCTCCTGCCACTTCAATCATGTGCACTTAACTGGACACATTCTCGCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR TCA 72 bp | GTAATGGAAGCGAGAATGTGTCCAGTTAAGTGCACATaGTTGAAGTGGCAGGAGAAACCGGCAGGGGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VMEARMCPVKCT*LKWQEKPAGAS Trigger: GCTTGCCCCTGCCGGTTTCTCCTGCCACTTCAATCATGTGCACTTAACTGGACACATTCTCGCTTCCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR TCA 72 bp | CTCTCCAGCCCCACTGCTGGCTTTTCTATAGCATTGTaGTGTTCTTGTCAGTACTCAGACCAAGCCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSSPTAGFSIAL*CSCQYSDQAHG Trigger: CCCATGGGCTTGGTCTGAGTACTGACAAGAACATCACAATGCTATAGAAAAGCCAGCAGTGGGGCTGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | GCACTTCCTGGAATAAAACAACTCAAACACTGGCCCTaGCAAGCGGAGAGCTTGGATGTTTCCCAGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALPGIKQLKHWP*QAESLDVSQER Trigger: CCTTTCCTGGGAAACATCCAAGCTCTCCGCTTGCCAGGGCCAGTGTTTGAGTTGTTTTATTCCAGGAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | GCAAGGCGTTTGGGGAAACTGAAGCAGAGGCCTTGGTaGACAGGATTTCTGAGGAGAGCTGTGATTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARRLGKLKQRPW*TGFLRRAVILS Trigger: AGACAAAATCACAGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGCTACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTTGTTCAGAGACCTGCTaGGACGTGTACAACCAACCG | + |
|
Preference number: 3 (lower is better) Translates to: MSYHVVAGIGAQNLQKSSCSETC*DVYNQP Trigger: CGGTTGGTTGTACACGTCCAAGCAGGTCTCTGAACA...ACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTAGCTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | AACCACCTAGTGACACATTTTCCTGGGGAGACTTACTaGAGTCTGGGTCAAGTAGGATTCCCAACGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NHLVTHFPGETY*SLGQVGFPTVR Trigger: TCTCACCGTTGGGAATCCTACTTGACCCAGACTCCAGTAAGTCTCCCCAGGAAAATGTGTCACTAGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | CAAAGAAGAAATGCCCCGACAAAGGTTCATGCTCACTaGCCCACTAAGATATTTCCTGAGGGGAGAGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRRNAPTKVHAH*PTKIFPEGRVG Trigger: GCCAACTCTCCCCTCAGGAAATATCTTAGTGGGCCAGTGAGCATGAACCTTTGTCGGGGCATTTCTTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | CCTCAGCATAGGAATCGAGTTCAGAACAGCTCTGGCTaGAGGTCACAAGGCCAACATAATGCAGATGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PQHRNRVQNSSG*RSQGQHNADGF Trigger: GAAACCATCTGCATTATGTTGGCCTTGTGACCTCCAGCCAGAGCTGTTCTGAACTCGATTCCTATGCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | AAAGCAAGGCGTTTGGGGAAACTGAAGCAGAGGCCTTaGTGGACAGGATTTCTGAGGAGAGCTGTGATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KARRLGKLKQRP*WTGFLRRAVIL Trigger: CAAAATCACAGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | TTCTTAACCGCCGAGCCATCTCTCCAGCCCCACTGCTaGCTTTTCTATAGCATTGTGATGTTCTTGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLTAEPSLQPHC*LFYSIVMFLSV Trigger: TACTGACAAGAACATCACAATGCTATAGAAAAGCCAGCAGTGGGGCTGGAGAGATGGCTCGGCGGTTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR TCA 72 bp | TGTTCAGAGACCTGCTTGGACGTGTACAACCAACCGTaGGGCCATTTCTTCTGCTGCTATAGACATTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CSETCLDVYNQP*GHFFCCYRHCL Trigger: TAAGCAATGTCTATAGCAGCAGAAGAAATGGCCTCACGGTTGGTTGTACACGTCCAAGCAGGTCTCTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CCA 72 bp | TTTTATGAGTCAGATGACAGTGTTCAGAGACCTGCTTaGACGTGTACAACCAACCGTGAGGCCATTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FYESDDSVQRPA*TCTTNREAISS Trigger: AGAAGAAATGGCCTCACGGTTGGTTGTACACGTCCAAGCAGGTCTCTGAACACTGTCATCTGACTCATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCGCTCCCTGAGTCGCTGGGTTaGACGTCCACCACCACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPQNLESFLGVPSHPALPESLG*TSTTTR Trigger: GCGGGTGGTGGTGGACGTGCAACCCAGCGACTCAGG...GAGCGCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCCACCTGTGTCAGGTGCCCTGCTTTTTGCCAACCATGGCCTCTCAAAGCACAGCCGGTTAGGCCCTaGGACCCCACTGCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MATCVRCPAFCQPWPLKAQPVRP*DPTAGA Trigger: GGCCCCAGCAGTGGGGTCCCAGGGCCTAACCGGCTG...TGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR TCA 90 bp | TACACCAATCACTCCCAGCCTCCTCGCAGACTACACAGCACCTGGAGGGAGCTTAGTAGGAAGAGAAGGTaGGGCTGGCCACCGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTNHSQPPRRLHSTWRELSRKRR*GWPPGR Trigger: CCGCCCCGGTGGCCAGCCTCACCTTCTCTTCCTACT...AAGCTCCCTCCAGGTGCTGTGTAGTCTGCGAGGAGGCTGGGAGTGATTGGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTTCTTGTCAGTACTCAGACCAAGCCCATGGGCAGGCAGGTGCCACTTCGGGCCTGGCACAGCTTaGGCGCGATGCGCGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VMFLSVLRPSPWAGRCHFGPGTA*ARCART Trigger: TGTACGCGCGCATCGCGCGCAAGCTGTGCCAGGCCC...GAAGTGGCACCTGCCTGCCCATGGGCTTGGTCTGAGTACTGACAAGAACATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTTCTTGTCAGTACTCAGACCAAGCCCATGGGCAGGCAGGTGCCACTTCCGGCGGTGTAGACCTTaGGCATGCCCTTCTCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VMFLSVLRPSPWAGRCHFRRCRP*ACPSRA Trigger: GGCCCGAGAAGGGCATGCGCAAGGTCTACACCGCCG...GAAGTGGCACCTGCCTGCCCATGGGCTTGGTCTGAGTACTGACAAGAACATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGAAATCAAGACTCGGGGGCCAGCTaGCGTTGGGAGGCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQTWEQQRASQSVLRNQDSGAS*RWEAGR Trigger: CCTCCCAGCCTCCCAACGGCAGCTGGCCCCCGAGTC...TTGATTTCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGAAATCAAGCCCGGAAGGCAGCCTaGAAGCCGCGGCGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQTWEQQRASQSVLRNQARKAA*KPRRKF Trigger: GAACTTCCGCCGCGGCTTCCAGGCTGCCTTCCGGGC...TTGATTTCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CAA 72 bp | CACAGGGATGGCCACCTGTGTCAGGTGCCCTGCTTTTaGCCAACCATGGCCTCTCAAAGCAAGGCGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRDGHLCQVPCF*PTMASQSKAFG Trigger: CCCAAACGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGCAGGGCACCTGACACAGGTGGCCATCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTGGCCTAATTTTAGAGCTCCCCGTAGTCGATaGGCAGCAGCAGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGTGLTLSLLWPNFRAPRSR*AAAAPR Trigger: TCTGGGTGCTGCTGCTGCTCATCGACTACGGGGAGC...TCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | TGGACGTGTACAACCAACCGTGAGGCCATTTCTTCTGCTGCTATAGACATTGCTGCCCTGGGACCCCACTaGTGGGGCCAGACTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: WTCTTNREAISSAAIDIAALGPH*WGQTPM Trigger: CATCGGAGTCTGGCCCCAGCAGTGGGGTCCCAGGGC...AGCAATGTCTATAGCAGCAGAAGAAATGGCCTCACGGTTGGTTGTACACGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGAGCTGCTCAGTTGTGACATGCTGAAGTGGGTATGGCACTTCCTGGAACGTACATCACCACGATaGGCGCCAGCGGCGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLELLSCDMLKWVWHFLERTSPR*APAAPD Trigger: ATCTGGCGCCGCTGGCGCTCATCGTGGTGATGTACG...TTCCAGGAAGTGCCATACCCACTTCAGCATGTCACAACTGAGCAGCTCCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTGGCCTAATTTTAGATGTAGACCTTGCGCATaGCCTTCTCGGGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGTGLTLSLLWPNFRCRPCA*PSRARP Trigger: AGGCCTGGCCCGAGAAGGGCATGCGCAAGGTCTACA...TCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCCAGAACATTTTATGAGTCAGATGACAGTGTTCAGAGACCTGCTTGGGGGGCCAGCTGCCGTTaGGAGGCTGGGAGGGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETARTFYESDDSVQRPAWGASCR*EAGRVP Trigger: CGGAACCCTCCCAGCCTCCCAACGGCAGCTGGCCCC...CCAAGCAGGTCTCTGAACACTGTCATCTGACTCATAAAATGTTCTGGCTGTTTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCCAGAACATTTTATGAGTCAGATGACAGTGTTCAGAGACCTGCTTGGGCTGGACCGGGGGCCTaGCACAGCTTGCGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ETARTFYESDDSVQRPAWAGPGA*HSLRAM Trigger: CATCGCGCGCAAGCTGTGCCAGGCCCCCGGTCCAGC...CCAAGCAGGTCTCTGAACACTGTCATCTGACTCATAAAATGTTCTGGCTGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR CCA 90 bp | CATTGCTTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGACAGCAGCACCCAGAGTaGCAGCCAGGACAAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCLGQTWEQQRASQSVLRQQHPE*QPGQGE Trigger: TTCACCTTGTCCTGGCTGCCACTCTGGGTGCTGCTG...TCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAAGCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CAA 72 bp | GAGTCTGGGTCAAGTAGGATTCCCAACGGTGAGACCTaGTCACCTCTCCCTGGGTCTCAATGCCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGSSRIPNGET*SPLPGSQCLTV Trigger: GACAGTGAGGCATTGAGACCCAGGGAGAGGTGACAAGGTCTCACCGTTGGGAATCCTACTTGACCCAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CAA 72 bp | AAACAACTCAAACACTGGCCCTGGCAAGCGGAGAGCTaGGATGTTTCCCAGGAAAGGGCCAAGGGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKHWPWQAES*DVSQERAKGSS Trigger: AGAGCTCCCCTTGGCCCTTTCCTGGGAAACATCCAAGCTCTCCGCTTGCCAGGGCCAGTGTTTGAGTTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| 3UTR CAA 72 bp | TCCCCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTaGCTGTGGCCTAATTTTAGAGCCCGGGAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGVSGTGLTLS*LWPNFRARESQ Trigger: TTGTGACTCCCGGGCTCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGTCTCAGGGACAGGGTTGACACTGTCCTTGCTGTGGCCTAATTTTAGACAATGGCCACCAGTGTaGAAACCGACGCAGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGTGLTLSLLWPNFRQWPPV*KPTQTR Trigger: CCGTGTCTGCGTCGGTTTTCACACTGGTGGCCATTG...TCTAAAATTAGGCCACAGCAAGGACAGTGTCAACCCTGTCCCTGAGACTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR TCA 90 bp | TACTCAAGTAAGGACAAGGATGATTCACAGGGATGGCCACCTGTGTCAGGTGCCAGAAGAGCGCCACCATaGCCAGCATATGCACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: YSSKDKDDSQGWPPVSGARRAPP*PAYAPR Trigger: GCGTGGTGCATATGCTGGTCATGGTGGCGCTCTTCT...GGCACCTGACACAGGTGGCCATCCCTGTGAATCATCCTTGTCCTTACTTGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGGAGCTGCTCAGTTGTGACATGCTGAAGTGGGTATGGCACTTCCTGGAAACAGCTTGCGCGCGATaGGCGCGTACATCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FLELLSCDMLKWVWHFLETACAR*ARTSPR Trigger: TCGTGGTGATGTACGCGCGCATCGCGCGCAAGCTGT...TTCCAGGAAGTGCCATACCCACTTCAGCATGTCACAACTGAGCAGCTCCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS-3UTR GCA 90 bp | TACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCAGTGTACCATGACCAGCATATaGACCACGCGGGCCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YHVVAGIGAQNLQKSSQCTMTSI*TTRALR Trigger: CCGCAGGGCCCGCGTGGTGCATATGCTGGTCATGGT...ACACTGACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR GCA 90 bp | TTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGAAATCAAGAAGGCCAGCCAGTGTaGCAACGGGAAGGCGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGQTWEQQRASQSVLRNQEGQPV*QREGVD Trigger: GTCTACGCCTTCCCGTTGGCACACTGGCTGGCCTTC...TTGATTTCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 72 bp | CATAATGCAGATGGTTTCCTGCCCCAGCCCCAGAACTaGGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HNADGFLPQPQN*ESFLGVPSHPA Trigger: CGCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGGCAGGAAACCATCTGCATTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 72 bp | GCTTTTTGCCAACCATGGCCTCTCAAAGCAAGGCGTTaGGGGAAACTGAAGCAGAGGCCTTGGTGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFCQPWPLKARR*GKLKQRPWWTG Trigger: TCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGCTTTGAGAGGCCATGGTTGGCAAAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR GCA 90 bp | AGTGACACATTTTCCTGGGGAGACTTACTGGAGTCTGGGTCAAGTAGGATTCCCACGCAGACACGGACATaGCCTGTACCAAGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDTFSWGDLLESGSSRIPTQTRT*PVPSRS Trigger: TGAGCGGCTTGGTACAGGGCATGTCCGTGTCTGCGT...GGGAATCCTACTTGACCCAGACTCCAGTAAGTCTCCCCAGGAAAATGTGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCTACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTAAGCCAGCAGAGCTGTaGCCGGAAGGCAGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSYHVVAGIGAQNLQKSSKPAEL*PEGSLE Trigger: TTCCAGGCTGCCTTCCGGGCACAGCTCTGCTGGCTT...ACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTAGCTCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 72 bp | CCCCACTGCTGGCTTTTCTATAGCATTGTGATGTTCTaGTCAGTACTCAGACCAAGCCCATGGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHCWLFYSIVMF*SVLRPSPWAGR Trigger: CCTGCCTGCCCATGGGCTTGGTCTGAGTACTGACAAGAACATCACAATGCTATAGAAAAGCCAGCAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CCA 90 bp | GGGTTCTTCTTGGAGCTGCTCAGTTGTGACATGCTGAAGTGGGTATGGCACTTCCGCTCATCTTGCATGTaGCATTGTCAAAAGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLELLSCDMLKWVWHFRSSCM*HCQKAN Trigger: GTTGGCCTTTTGACAATGCCACATGCAAGATGAGCG...GAAGTGCCATACCCACTTCAGCATGTCACAACTGAGCAGCTCCAAGAAGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| 3UTR CAA 72 bp | CAAAGCAAGGCGTTTGGGGAAACTGAAGCAGAGGCCTaGGTGGACAGGATTTCTGAGGAGAGCTGTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSKAFGETEAEA*VDRISEESCDF Trigger: AAAATCACAGCTCTCCTCAGAAATCCTGTCCACCAAGGCCTCTGCTTCAGTTTCCCCAAACGCCTTGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR GCA 90 bp | CCTCTTCCTAACCACCTAGTGACACATTTTCCTGGGGAGACTTACTGGAGTCTGCCAAGCCGCTCATCTTaGATGTGGCATTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPNHLVTHFPGETYWSLPSRSS*MWHCQK Trigger: CTTTTGACAATGCCACATGCAAGATGAGCGGCTTGG...CAGACTCCAGTAAGTCTCCCCAGGAAAATGTGTCACTAGGTGGTTAGGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CCA 90 bp | TACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTCAGTGTTCAAATGTTCCAGGCTaGGATAGTGAGGGGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: YHVVAGIGAQNLQKSSQCSNVPG*DSEGHV Trigger: CACATGCCCCTCACTATCCCAGCCTGGAACATTTGA...ACACTGACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS GCA 90 bp | CCACTGCTGGGGCCAGACTCCGATGGCAGCCCTGAGTCGCTGGGTTaGACGTCCACCACCACCCGCCTGCGCAGGAGGCGGCCAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLGPDSDGSPESLG*TSTTTRLRRRRPGR Trigger: GCGGCCTGGCCGCCTCCTGCGCAGGCGGGTGGTGGTGGACGTGCAACCCAGCGACTCAGGGCTGCCATCGGAGTCTGGCCCCAGCAGTGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS GCA 90 bp | GGCAGCCAGGACAAGGTGAAGAAGAGCGCCACCATGACCAGCATATaGACCACGCGGGCCCTGCGGCGCGACGCGCGGCCACCCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSQDKVKKSATMTSI*TTRALRRDARPPSA Trigger: GGCCGAGGGTGGCCGCGCGTCGCGCCGCAGGGCCCGCGTGGTGCATATGCTGGTCATGGTGGCGCTCTTCTTCACCTTGTCCTGGCTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS GCA 90 bp | ATGGCAGCCCTGAGTCGCTGGGTTGCACGTCCACCACCACCCGCCTaGGCAGGAGGCGGCCAGGCCGCTCGGAGTAGGCTTGCTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MAALSRWVARPPPPA*AGGGQAARSRLACG Trigger: CCCACAAGCAAGCCTACTCCGAGCGGCCTGGCCGCCTCCTGCGCAGGCGGGTGGTGGTGGACGTGCAACCCAGCGACTCAGGGCTGCCAT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS TCA 90 bp | GGGCCTGGCACAGCTTGCGCGCGATGCGCGCGTACATCACCACGATaGGCGCCAGCGGCGCCAGATAGATGTGCGCGAAGAGCACGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGTACARCARTSPR*APAAPDRCARRARR Trigger: CCGCCGTGCTCTTCGCGCACATCTATCTGGCGCCGCTGGCGCTCATCGTGGTGATGTACGCGCGCATCGCGCGCAAGCTGTGCCAGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CCA 90 bp | AGGGGCATGTGGTTGCAGCCAGGCCCTTCCCTCGGGCCATCCTGGTaGGCCACACGCCCATTGCGCAATGGCAGCCGGTTAGGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGMWLQPGPSLGPSW*ATRPLRNGSRLGPG Trigger: CCCAGGGCCTAACCGGCTGCCATTGCGCAATGGGCGTGTGGCCCACCAGGATGGCCCGAGGGAAGGGCCTGGCTGCAACCACATGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CCA 90 bp | GTGAGGGGCATGTGGTTGCAGCCAGGCCCTTCCCTCGGGCCATCCTaGTGGGCCACACGCCCATTGCGCAATGGCAGCCGGTTAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRGMWLQPGPSLGPS*WATRPLRNGSRLGP Trigger: AGGGCCTAACCGGCTGCCATTGCGCAATGGGCGTGTGGCCCACCAGGATGGCCCGAGGGAAGGGCCTGGCTGCAACCACATGCCCCTCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS GCA 90 bp | GCGGCGCCAGATAGATGTGCGCGAAGAGCACGGCGGTGTAGACCTTaGGCATGCCCTTCTCGGGCCAGGCCTCCCAGCACGAGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAPDRCARRARRCRP*ACPSRARPPSTSRE Trigger: CTCTCTACTCGTGCTGGGAGGCCTGGCCCGAGAAGGGCATGCGCAAGGTCTACACCGCCGTGCTCTTCGCGCACATCTATCTGGCGCCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS GCA 90 bp | CCAGATAGATGTGCGCGAAGAGCACGGCGGTGTAGACCTTGCGCATaGCCTTCTCGGGCCAGGCCTCCCAGCACGAGTAGAGAGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDRCARRARRCRPCA*PSRARPPSTSREGR Trigger: CCTACCCTCTCTACTCGTGCTGGGAGGCCTGGCCCGAGAAGGGCATGCGCAAGGTCTACACCGCCGTGCTCTTCGCGCACATCTATCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS TCA 90 bp | ACATGGCGGCCACCGGAGAGGAGTGCTGGTAGTAGGAAGAGAAGGTaGGGCTGGCCACCGGGGCGGTTTCAGCATCACTCTCGTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWRPPERSAGSRKRR*GWPPGRFQHHSRSD Trigger: GTCTGAACGAGAGTGATGCTGAAACCGCCCCGGTGGCCAGCCTCACCTTCTCTTCCTACTACCAGCACTCCTCTCCGGTGGCCGCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CCA 90 bp | CTCGCTCAGCTCCCCGTAGTCGATGAGCAGCAGCAGCACCCAGAGTaGCAGCCAGGACAAGGTGAAGAAGAGCGCCACCATGACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LAQLPVVDEQQQHPE*QPGQGEEERHHDQH Trigger: ATGCTGGTCATGGTGGCGCTCTTCTTCACCTTGTCCTGGCTGCCACTCTGGGTGCTGCTGCTGCTCATCGACTACGGGGAGCTGAGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS TCA 90 bp | GGTGTACGATGCAGCGGAACCTCTCCACGGCAATGGCCACCAGTGTaGAAACCGACGCAGACACGGACATGCCCTGTACCAAGCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVRCSGTSPRQWPPV*KPTQTRTCPVPSRS Trigger: TGAGCGGCTTGGTACAGGGCATGTCCGTGTCTGCGTCGGTTTTCACACTGGTGGCCATTGCCGTGGAGAGGTTCCGCTGCATCGTACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CAA 90 bp | ATGAGCTACCATGTAGTTGCTGGAATTGGAGCTCAGAACCTCCAGAAGAGCAGTGGGGCCTGGCACAGCTaGCGCGCGATGCGCGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MSYHVVAGIGAQNLQKSSGAWHS*RAMRAY Trigger: GTACGCGCGCATCGCGCGCAAGCTGTGCCAGGCCCC...ACTGCTCTTCTGGAGGTTCTGAGCTCCAATTCCAGCAACTACATGGTAGCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CAA 90 bp | CATTGCTTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGAGGTTGTCCACGAGGGTaGTGGGCATGCAGAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: HCLGQTWEQQRASQSVLRGCPRG*WACRRC Trigger: GCATCTTCTGCATGCCCACAACCCTCGTGGACAACC...TCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAAGCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CAA 90 bp | TTAGGACAGACCTGGGAACAGCAAAGGGCCAGCCAGAGCGTGTTAAGAAATCAAAAGCAGACCAGGGTGTaGCCCACCATGCAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGQTWEQQRASQSVLRNQKQTRV*PTMQRR Trigger: CCTCCTCTGCATGGTGGGCAACACCCTGGTCTGCTT...TTGATTTCTTAACACGCTCTGGCTGGCCCTTTGCTGTTCCCAGGTCTGTCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CAA 90 bp | CCTGCCCCAGCCCCAGAACTTGGAGTCATTCCTTGGAGTTCCTTCTCATCCGGCACCAAGCCGCTCATCTaGCATGTGGCATTGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAPAPELGVIPWSSFSSGTKPLI*HVALSK Trigger: TTTTGACAATGCCACATGCAAGATGAGCGGCTTGGT...GCCGGATGAGAAGGAACTCCAAGGAATGACTCCAAGTTCTGGGGCTGGGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS-3UTR CAA 90 bp | GGGCCTCACCACATCCCGACTGACCACCTTCTCCTTCCCAGTAAACAAAGAAGAATCTTGCATGTGGCATaGTCAAAAGGCCAACCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPHHIPTDHLLLPSKQRRILHVA*SKGQPV Trigger: CACCGGTTGGCCTTTTGACAATGCCACATGCAAGAT...TCTTCTTTGTTTACTGGGAAGGAGAAGGTGGTCAGTCGGGATGTGGTGAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CCA 72 bp | ACCGCCTCCTCCGCGTCGCGCGCTGGACCGGGGGCCTaGCACAGCTTGCGCGCGATGCGCGCGTACATCACC | + |
|
Preference number: 6 (lower is better) Translates to: TASSASRAGPGA*HSLRAMRAYIT Trigger: GGTGATGTACGCGCGCATCGCGCGCAAGCTGTGCCAGGCCCCCGGTCCAGCGCGCGACGCGGAGGAGGCGGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CAA 90 bp | ACCGCCTCCTCCGCGTCGCGCGCTGGACCGGGGGCCTGGCACAGCTaGCGCGCGATGCGCGCGTACATCACCACGATGAGCGCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TASSASRAGPGAWHS*RAMRAYITTMSASG Trigger: GCCGCTGGCGCTCATCGTGGTGATGTACGCGCGCATCGCGCGCAAGCTGTGCCAGGCCCCCGGTCCAGCGCGCGACGCGGAGGAGGCGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CAA 90 bp | CACCACCCGCCTGCGCAGGAGGCGGCCAGGCCGCTCGGAGTAGGCTaGCTTGTGGGCGGCCCAGGGAAGCCAGCAGAGCTGTGCCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HHPPAQEAARPLGVG*LVGGPGKPAELCPE Trigger: TTCCGGGCACAGCTCTGCTGGCTTCCCTGGGCCGCCCACAAGCAAGCCTACTCCGAGCGGCCTGGCCGCCTCCTGCGCAGGCGGGTGGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CAA 72 bp | CCTGCGCAGGAGGCGGCCAGGCCGCTCGGAGTAGGCTaGCTTGTGGGCGGCCCAGGGAAGCCAGCAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAQEAARPLGVG*LVGGPGKPAEL Trigger: CAGCTCTGCTGGCTTCCCTGGGCCGCCCACAAGCAAGCCTACTCCGAGCGGCCTGGCCGCCTCCTGCGCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CAA 90 bp | CAGCCAGGCCCTTCCCTCGGGCCATCCTGGTGGGCCACACGCCCATaGCGCAATGGCAGCCGGTTAGGCCCTGGGACCCCACTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QPGPSLGPSWWATRP*RNGSRLGPGTPLLG Trigger: CCCCAGCAGTGGGGTCCCAGGGCCTAACCGGCTGCCATTGCGCAATGGGCGTGTGGCCCACCAGGATGGCCCGAGGGAAGGGCCTGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS GCA 72 bp | GACAAGGTGAAGAAGAGCGCCACCATGACCAGCATATaGACCACGCGGGCCCTGCGGCGCGACGCGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DKVKKSATMTSI*TTRALRRDARP Trigger: TGGCCGCGCGTCGCGCCGCAGGGCCCGCGTGGTGCATATGCTGGTCATGGTGGCGCTCTTCTTCACCTTGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CCA 72 bp | CACACGCCCATTGCGCAATGGCAGCCGGTTAGGCCCTaGGACCCCACTGCTGGGGCCAGACTCCGATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HTPIAQWQPVRP*DPTAGARLRWQ Trigger: CTGCCATCGGAGTCTGGCCCCAGCAGTGGGGTCCCAGGGCCTAACCGGCTGCCATTGCGCAATGGGCGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS CCA 72 bp | ATGTGGTTGCAGCCAGGCCCTTCCCTCGGGCCATCCTaGTGGGCCACACGCCCATTGCGCAATGGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: MWLQPGPSLGPS*WATRPLRNGSR Trigger: CCGGCTGCCATTGCGCAATGGGCGTGTGGCCCACCAGGATGGCCCGAGGGAAGGGCCTGGCTGCAACCACAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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| CDS GCA 72 bp | GATAGATGTGCGCGAAGAGCACGGCGGTGTAGACCTTaGGCATGCCCTTCTCGGGCCAGGCCTCCCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: DRCARRARRCRP*ACPSRARPPST Trigger: CGTGCTGGGAGGCCTGGCCCGAGAAGGGCATGCGCAAGGTCTACACCGCCGTGCTCTTCGCGCACATCTATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS TCA 72 bp | ACAGCTTGCGCGCGATGCGCGCGTACATCACCACGATaGGCGCCAGCGGCGCCAGATAGATGTGCGCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TACARCARTSPR*APAAPDRCARR Trigger: TCTTCGCGCACATCTATCTGGCGCCGCTGGCGCTCATCGTGGTGATGTACGCGCGCATCGCGCGCAAGCTGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS TCA 72 bp | CCACCGGAGAGGAGTGCTGGTAGTAGGAAGAGAAGGTaGGGCTGGCCACCGGGGCGGTTTCAGCATCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPERSAGSRKRR*GWPPGRFQHHS Trigger: AGAGTGATGCTGAAACCGCCCCGGTGGCCAGCCTCACCTTCTCTTCCTACTACCAGCACTCCTCTCCGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS TCA 72 bp | TGCAGCGGAACCTCTCCACGGCAATGGCCACCAGTGTaGAAACCGACGCAGACACGGACATGCCCTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: CSGTSPRQWPPV*KPTQTRTCPVP Trigger: TGGTACAGGGCATGTCCGTGTCTGCGTCGGTTTTCACACTGGTGGCCATTGCCGTGGAGAGGTTCCGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CAA 72 bp | CATGTGGCATTGTCAAAAGGCCAACCGGTGATAAGGTaGTCCACGAGGGTTGTGGGCATGCAGAAGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HVALSKGQPVIR*STRVVGMQKMP Trigger: GGGCATCTTCTGCATGCCCACAACCCTCGTGGACAACCTTATCACCGGTTGGCCTTTTGACAATGCCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CAA 72 bp | GCAGACACGGACATGCCCTGTACCAAGCCGCTCATCTaGCATGTGGCATTGTCAAAAGGCCAACCGGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: ADTDMPCTKPLI*HVALSKGQPVI Trigger: TATCACCGGTTGGCCTTTTGACAATGCCACATGCAAGATGAGCGGCTTGGTACAGGGCATGTCCGTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CAA 90 bp | AAAACCGACGCAGACACGGACATGCCCTGTACCAAGCCGCTCATCTaGCATGTGGCATTGTCAAAAGGCCAACCGGTGATAAGGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTDADTDMPCTKPLI*HVALSKGQPVIRLS Trigger: GGACAACCTTATCACCGGTTGGCCTTTTGACAATGCCACATGCAAGATGAGCGGCTTGGTACAGGGCATGTCCGTGTCTGCGTCGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
||
| CDS CAA 72 bp | ATGCCCTGTACCAAGCCGCTCATCTTGCATGTGGCATaGTCAAAAGGCCAACCGGTGATAAGGTTGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: MPCTKPLILHVA*SKGQPVIRLST Trigger: CGTGGACAACCTTATCACCGGTTGGCCTTTTGACAATGCCACATGCAAGATGAGCGGCTTGGTACAGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020287.8 |
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