Pregenerated sensors for NPEPPS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001441Ensembl transcript IDs: ENSMUST00000001480.14, ENSMUST00000154372.9, ENSMUST00000154917.8, ENSMUST00000165216.8, ENSMUST00000167806.8, ENSMUST00000172108.8
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTaGGTCAGCTGTTTGGTAGCTCCACCTCATCCCTGCAGAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: HCPTPTGVRLQILGM*VSCLVAPPHPCREA Trigger: TGCCTCTCTGCAGGGATGAGGTGGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR CCA 90 bp | ATAATTCTGCACAGGCTCCACTATGTGAGCCAGCTATCAGCCTTTTaGTCAGCATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: IILHRLHYVSQLSAF*SASPVMDIPGLSGC Trigger: GCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGATGCTGACCAAAAGGCTGATAGCTGGCTCACATAGTGGAGCCTGTGCAGAATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR CCA 90 bp | TGTGGCCATCAAAGATGTTTCTGTTATCTAAGGACAGGTCAGGGCTaGGCAGAACTAAAGGGAGAAGAACCCGGGAAGGGAGGGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: CGHQRCFCYLRTGQG*AELKGEEPGKGGRV Trigger: CACCCTCCCTCCCTTCCCGGGTTCTTCTCCCTTTAGTTCTGCCCAGCCCTGACCTGTCCTTAGATAACAGAAACATCTTTGATGGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR CCA 90 bp | CTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTaGCATGTGAGTCAGCTGTTTGGTAGCTCCACCTCATCCCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LHSLSNPHWCKTPDS*HVSQLFGSSTSSLQ Trigger: CTGCAGGGATGAGGTGGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR CCA 90 bp | TGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTaGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: WSVSRDLLHSLSNPH*CKTPDSWHVSQLFG Trigger: ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR TCA 90 bp | TCGGAAGAGGTGCAGCATTTGGCCTGTCAGGTAACCGGACAGTTTTaGGCAGAAGGCCTAGCTGATAATCTTTATTTCTACTCTTTCACC | + |
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Preference number: 1 (lower is better) Translates to: SEEVQHLACQVTGQF*AEGLADNLYFYSFT Trigger: GGTGAAAGAGTAGAAATAAAGATTATCAGCTAGGCCTTCTGCTCAAAACTGTCCGGTTACCTGACAGGCCAAATGCTGCACCTCTTCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTAGGACAGGTCAGGGCTaGGCAGAACTAAAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TLATQRCSGHLGPTAVPTRTGQG*AELKGE Trigger: TTCTCCCTTTAGTTCTGCCCAGCCCTGACCTGTCCT...AGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR-3UTR GCA 90 bp | GACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGGCTCCACCTCATCCCTaGAGAGAGGCAGTGAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: DLLHSLSNPHWCKTPDSWAPPHP*REAVRP Trigger: GGGCCTCACTGCCTCTCTGCAGGGATGAGGTGGAGC...CCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR-3UTR GCA 90 bp | TACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGGCTCCACCTCATCCCTaGAGAGAGGCAGTGAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: YYIHCPTPTGVRLQILGMAPPHP*REAVRP Trigger: GGGCCTCACTGCCTCTCTGCAGGGATGAGGTGGAGC...CATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR CAA 90 bp | TATAATTCTGCACAGGCTCCACTATGTGAGCCAGCTATCAGCCTTTaGGTCAGCATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YNSAQAPLCEPAISL*VSIPSDGHTRLVRL Trigger: CAGCCTGACAAGCCGGGTATGTCCATCACTGGGGATGCTGACCAAAAGGCTGATAGCTGGCTCACATAGTGGAGCCTGTGCAGAATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR CAA 90 bp | GGCTATAAAACAATATCCGTCACTAACAGGAGAGTGTTCAACACTTaGACCATGACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTC | + |
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Preference number: 2 (lower is better) Translates to: GYKTISVTNRRVFNT*TMTGFRKFHSFVML Trigger: GAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTCATGGTCAAAGTGTTGAACACTCTCCTGTTAGTGACGGATATTGTTTTATAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTCTAGTTTATTACTATCATCAGATTCTTGGCATGTaGGTCAGCTGTTTGGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DRLQEVSQFRYALVYYYHQILGM*VSCLVA Trigger: AGCTACCAAACAGCTGACTCACATGCCAAGAATCTG...ATGATAGTAATAAACTAGAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR TCA 72 bp | CAGCAGTCCCCACTGGCCCCTCATATGCACAAGTGGTaGGCCAGGCTCACTGATACTGATCGGAAGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: QQSPLAPHMHKW*ARLTDTDRKRC Trigger: GCACCTCTTCCGATCAGTATCAGTGAGCCTGGCTCACCACTTGTGCATATGAGGGGCCAGTGGGGACTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTGGAGGGAACTACAATCCTaGGTTCAGATTGAGTTATAC | + |
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Preference number: 3 (lower is better) Translates to: TGDTAVQRTSGPHSSPHWRELQS*VQIELY Trigger: GTATAACTCAATCTGAACCAAGGATTGTAGTTCCCT...CCAGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR GCA 72 bp | GCATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTaGAGACACCCACTTCACAAAACCCTCTTCCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: ASPVMDIPGLSG*RHPLHKTLFPL Trigger: AAGAGGGAAGAGGGTTTTGTGAAGTGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR CCA 72 bp | CACAGGCTCCACTATGTGAGCCAGCTATCAGCCTTTTaGTCAGCATCCCCAGTGATGGACATACCCGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HRLHYVSQLSAF*SASPVMDIPGL Trigger: CAAGCCGGGTATGTCCATCACTGGGGATGCTGACCAAAAGGCTGATAGCTGGCTCACATAGTGGAGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR-3UTR CAA 90 bp | ATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACACCCACTTCACAAGACCTACTACATTCATaGTCCAACCCCCACTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: IPSDGHTRLVRLQTPTSQDLLHS*SNPHWC Trigger: ACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTC...TTGTGAAGTGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| 3UTR CCA 72 bp | AGCAGGGACCTACTACATTCATTGTCCAACCCCCACTaGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SRDLLHSLSNPH*CKTPDSWHVSQ Trigger: CTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR TCA 72 bp | GATTTTCCTTTTTCAATAGAATTTAATTCTGGAGTGTaGGCAGGGACCTACTACATTCATTGTCCAACCCCC | + |
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Preference number: 3 (lower is better) Translates to: DFPFSIEFNSGV*AGTYYIHCPTP Trigger: GGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCAGAATTAAATTCTATTGAAAAAGGAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | ACACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTAACACTGCTGGATGGTaGGCTCAGCTGAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLATQRCSGHLGPTAVPTNTAGW*AQLKEL Trigger: CAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTGTT...AGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR TCA 90 bp | CTTTTGGTCAGCATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACAGGCAGAGGCTGTAGTTaGTGGGCGACACCTCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSIPSDGHTRLVRLQTGRGCS*WATPRR Trigger: CCGCCGAGGTGTCGCCCATCAACTACAGCCTCTGCC...TGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGATGCTGACCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR GCA 90 bp | TGGTCAGCATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACACCCAGCAGCTTTCCTCCCATaGTTGCTGCCTCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WSASPVMDIPGLSGCRHPAAFLP*LLPPAT Trigger: AGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGC...TGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGATGCTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR GCA 90 bp | ACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTGGGAGAAAGGTCACGGATaGCTGGTAATAAACTTTCGA | + |
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Preference number: 4 (lower is better) Translates to: TGDTAVQRTSGPHSSPHWEKGHG*LVINFR Trigger: TCGAAAGTTTATTACCAGGCATCCGTGACCTTTCTC...CCAGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR CCA 90 bp | ACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTGGGGAATCCCATTTGTTTaGTCCAGGTATTCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: TGDTAVQRTSGPHSSPHWGIPFV*SRYSSQ Trigger: CTGTGATGAATACCTGGACCAAACAAATGGGATTCC...CCAGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR CCA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCGTTGCCTGCCTTACCTaGGCGGCGGCCTCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSVACLT*AAASSL Trigger: CAAGCTGGAGGCCGCCGCCCAGGTAAGGCAGGCAAC...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR TCA 90 bp | GACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGGGCAGAGGCTGTAGTTaGTGGGCGACACCTCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: DLLHSLSNPHWCKTPDSWGRGCS*WATPRR Trigger: CCGCCGAGGTGTCGCCCATCAACTACAGCCTCTGCC...CCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR TCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCACCCTGGTACCGGTTGTaGAGCTCCTCCCAGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPPWYRL*SSSQLS Trigger: GGACAACTGGGAGGAGCTTCACAACCGGTACCAGGG...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR TCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATGGTGCGCTCAGCTaGAGGAGCTGGGTGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPDGALS*RSWVTL Trigger: GAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATC...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| 3UTR CAA 72 bp | GCACAGGCTCCACTATGTGAGCCAGCTATCAGCCTTTaGGTCAGCATCCCCAGTGATGGACATACCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AQAPLCEPAISL*VSIPSDGHTRL Trigger: AAGCCGGGTATGTCCATCACTGGGGATGCTGACCAAAAGGCTGATAGCTGGCTCACATAGTGGAGCCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR TCA 90 bp | AAATCCTGTCGCATGGATTTCTGTCAGGACCTGAGTTCAGGCACTCAAGAGTTTGGCAGAGGCTGTAGTTaGTGGGCGACACCTCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KSCRMDFCQDLSSGTQEFGRGCS*WATPRR Trigger: CCGCCGAGGTGTCGCCCATCAACTACAGCCTCTGCC...AAACTCTTGAGTGCCTGAACTCAGGTCCTGACAGAAATCCATGCGACAGGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154917.8 |
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| CDS-3UTR TCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTCCCTGGTACCGGTTGTaGAGCTCCTCCCAGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGPWYRL*SSSQLS Trigger: GGACAACTGGGAGGAGCTTCACAACCGGTACCAGGG...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR TCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTGATGGTGCGCTCAGCTaGAGGAGCTGGGTGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGDGALS*RSWVTL Trigger: GAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATC...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | TTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTCCTCCCATGCTTGCTaGCTCCAGCCACTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LSNPHWCKTPDSWHVSQLSSHAC*LQPLHQ Trigger: TTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGA...CAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCACTTTCCTCCCATGCTTaGTGCCTCCAGCCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPLSSHA*CLQPLH Trigger: GTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAG...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR CCA 90 bp | AAATCCTGTCGCATGGATTTCTGTCAGGACCTGAGTTCAGGCACTCAAGAGTTTGTTGCCTGCCTTACCTaGGCGGCGGCCTCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: KSCRMDFCQDLSSGTQEFVACLT*AAASSL Trigger: CAAGCTGGAGGCCGCCGCCCAGGTAAGGCAGGCAAC...AAACTCTTGAGTGCCTGAACTCAGGTCCTGACAGAAATCCATGCGACAGGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154917.8 |
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| CDS-3UTR GCA 90 bp | CCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCAACACTGCTGGATGGTaGGCTCAGCTGAAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PHWCKTPDSWHVSQLFGSNTAGW*AQLKEL Trigger: CAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTGTT...GCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR CCA 90 bp | AATTTAATTCTGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCAGTTGCCTGCCTTACCTaGGCGGCGGCCTCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: NLILECEQGPTTFIVQPPVACLT*AAASSL Trigger: CAAGCTGGAGGCCGCCGCCCAGGTAAGGCAGGCAAC...TGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCAGAATTAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR CCA 90 bp | ACACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTCTTTACCCATTGGTCTaGTTTGACATTTTTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: TLATQRCSGHLGPTAVPTLYPLV*FDIFQN Trigger: GTTTTGAAAAATGTCAAACCAGACCAATGGGTAAAG...AGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
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| CDS-3UTR CCA 90 bp | TGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGTCCAAGTCGATCCACTaGGGGCAGAGAAAGGTCACG | + |
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Preference number: 4 (lower is better) Translates to: WSVSRDLLHSLSNPHWCKSKSIH*GQRKVT Trigger: CGTGACCTTTCTCTGCCCCCAGTGGATCGACTTGGA...CTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | GACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCTTTCCTCCCATGCTTaGTGCCTCCAGCCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: DLLHSLSNPHWCKTPDSWLSSHA*CLQPLH Trigger: GTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAG...CCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR CCA 90 bp | TCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGTCCAAGTCGATCCACTaGGGGCAGAGAAAGGTCACG | + |
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Preference number: 4 (lower is better) Translates to: SLSNPHWCKTPDSWHVSQSKSIH*GQRKVT Trigger: CGTGACCTTTCTCTGCCCCCAGTGGATCGACTTGGA...CTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR CCA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCCACAACACTGCTGGATaGTGCGCTCAGCTGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSHNTAG*CAQLKE Trigger: CTCCTTCAGCTGAGCGCACCATCCAGCAGTGTTGTG...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR CCA 90 bp | TCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCACAACACTGCTGGATaGTGCGCTCAGCTGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSNPHWCKTPDSWHVSQHNTAG*CAQLKE Trigger: CTCCTTCAGCTGAGCGCACCATCCAGCAGTGTTGTG...CTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAAGTTGCCTTATGGCCTaGTTTTCCCAGTTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPSCLMA*FSQFAQ Trigger: CTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACT...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | CTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATTCCTCCCATGCTTGCTaGCTCCAGCCACTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LLHSLSNPHWCKTPDSWHSSHAC*LQPLHQ Trigger: TTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGA...ATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS-3UTR GCA 90 bp | CTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGCAGCTTTCCTCCCATaGTTGCTGCCTCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSLSNPHWCKTPDSWHAAFLP*LLPPAT Trigger: AGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGC...ATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACACCCACTTCACAATCATCACAATTTGATTaGTTGCCTGCCTTACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSDGHTRLVRLQTPTSQSSQFD*LPALPG Trigger: CCCAGGTAAGGCAGGCAACCAATCAAATTGTGATGA...TTGTGAAGTGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGCATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACACCCATACTCTGGAAAGCAGTaGTCTACACAAAGATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSASPVMDIPGLSGCRHPYSGKQ*STQRYS Trigger: TGAGTATCTTTGTGTAGACCACTGCTTTCCAGAGTA...TGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGATGCTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGGCAGAGGCTGTAGTTaGTGGGCGACACCTCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPGRGCS*WATPRR Trigger: CCGCCGAGGTGTCGCCCATCAACTACAGCCTCTGCC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCGGTATTCATCACAGCTaGTATGGGTTTGCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSGIHHS*YGFATG Trigger: GCCAGTGGCAAACCCATAGCAGCTGTGATGAATACC...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGTTGCCTTATGGCCTaGTTTTCCCAGTTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGSCLMA*FSQFAQ Trigger: CTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACT...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGTTGCCTGCCTTACCTaGGCGGCGGCCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPVACLT*AAASSL Trigger: CAAGCTGGAGGCCGCCGCCCAGGTAAGGCAGGCAAC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCACCCAGAGATCCTCTGTaGCAGCATTCTTTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPPRDPL*QHSFVG Trigger: TCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGG...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTTCACAACACTGCTaGATGGTGCGCTCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSNPHWCKTPDSWHVSQLFSQHC*MVRSAE Trigger: TTCAGCTGAGCGCACCATCCAGCAGTGTTGTGAAAA...CAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTGCACAAAACTTCTTCTaGGACAGCTTCAGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGAQNFF*DSFSTL Trigger: CAGAGTGCTGAAGCTGTCTCAGAAGAAGTTTTGTGC...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACACCCACTTCACAACATGCTTTAAAACAGTaGGATAGACAGGACTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IPSDGHTRLVRLQTPTSQHALKQ*DRQDSL Trigger: TAAGGAGTCCTGTCTATCTCACTGTTTTAAAGCATG...TTGTGAAGTGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR TCA 90 bp | GACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGTGTCAGCATCTCGCTTaGGCCAAGCAGCATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DLLHSLSNPHWCKTPDSWCQHLA*AKQHST Trigger: TGTTGAATGCTGCTTGGCTCAAGCGAGATGCTGACA...CCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGGTTCCTGTACCTGTTTaGAGAGTGCTAGGAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNPHWCKTPDSWHVSQLVPVPV*RVLGKD Trigger: GTCTTTTCCTAGCACTCTGCAAACAGGTACAGGAAC...CAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGGTTCCTGTACCTGTTTaGAGAGTGCTAGGAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSVSRDLLHSLSNPHWCKVPVPV*RVLGKD Trigger: GTCTTTTCCTAGCACTCTGCAAACAGGTACAGGAAC...CTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTTTCCTTGCTCTGCTTTaGCAACAGGGGTGTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGFLALL*QQGCKH Trigger: GTGTTTACACCCCTGTTGGCAAAGCAGAGCAAGGAA...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTTCCTTGCTCTGCTTTaGCAACAGGGGTGTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SRDLLHSLSNPHWCKTPDFLALL*QQGCKH Trigger: GTGTTTACACCCCTGTTGGCAAAGCAGAGCAAGGAA...ATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTCTCCATGGCACCAGCTaGAAAGTCAGCAATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGLHGTS*KVSNSN Trigger: ATTGCTATTGCTGACTTTGCAGCTGGTGCCATGGAG...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCACCCTCCATGGCACCAGCTaGAAAGTCAGCAATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WCKTPDSWHVSQLFGSSTLHGTS*KVSNSN Trigger: ATTGCTATTGCTGACTTTGCAGCTGGTGCCATGGAG...GGTGGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTATATTTTCACAACACTaGTGGATGGTGCGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FWSVSRDLLHSLSNPHWCIFSQH*WMVRSA Trigger: AGCTGAGCGCACCATCCAGCAGTGTTGTGAAAATAT...ACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAATAAACTTTCGAGCATaGCAGAGCTGTACTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPINFRA*QSCTGF Trigger: GAACCCAGTACAGCTCTGCCATGCTCGAAAGTTTAT...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTTCCAAAGTTGCCTTATaGCCTGCTTTTCCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FWSVSRDLLHSLSNPHWCSKVAL*PAFPSL Trigger: CAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGA...ACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCAAAGTTGCCTTATaGCCTGCTTTTCCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHWCKTPDSWHVSQLFGSSKVAL*PAFPSL Trigger: CAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGA...GCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCACCCATTGGTCTGGTTTaGCATTTTTCAAAACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPPIGLV*HFSKPH Trigger: GTGTGGTTTTGAAAAATGTCAAACCAGACCAATGGG...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCACAAAAGCCTCCATaGCTTTTAGAACCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHWCKTPDSWHVSQLFGSSQKPP*LLEPLQ Trigger: CTGTAGAGGTTCTAAAAGTCATGGAGGCTTTTGTGA...GCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGTGATGGACATACCCGGCTTGTCAGGCTGCAGACACCCACTTCACAAAATATCAGCTTGTTTGTaGAGCTTCAGCATGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPVMDIPGLSGCRHPLHKISACL*SFSMIS Trigger: AGATATCATGCTGAAGCTTCACAAACAAGCTGATAT...TTTGTGAAGTGGGTGTCTGCAGCCTGACAAGCCGGGTATGTCCATCACTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACCCTGGTACCGGTTGTaGAGCTCCTCCCAGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPPWYRL*SSSQLS Trigger: GGACAACTGGGAGGAGCTTCACAACCGGTACCAGGG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | TCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGATATTTTCACAACACTaGTGGATGGTGCGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSNPHWCKTPDSWHVSQIFSQH*WMVRSA Trigger: AGCTGAGCGCACCATCCAGCAGTGTTGTGAAAATAT...CTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATCAAAGATGTTTCTGTTATCTAAGGACAGGTCAGGGCTGGGCAGAACCCAGAGATCCTCTGTaGCAGCATTCTTTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGHQRCFCYLRTGQGWAEPRDPL*QHSFVG Trigger: TCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGG...TTCTGCCCAGCCCTGACCTGTCCTTAGATAACAGAAACATCTTTGATGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR TCA 90 bp | CCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCAGGATCCTCACTAGTTaGAATTGTGATAGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHWCKTPDSWHVSQLFGSRILTS*NCDRNH Trigger: ATGGTTCCTATCACAATTTCAACTAGTGAGGATCCT...GCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCACCCCCATTGGTCTGGTTTaGCATTTTTCAAAACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: WCKTPDSWHVSQLFGSSTPIGLV*HFSKPH Trigger: GTGTGGTTTTGAAAAATGTCAAACCAGACCAATGGG...GGTGGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTTCACAAAAGCCTCCATaGCTTTTAGAACCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGSQKPP*LLEPLQ Trigger: CTGTAGAGGTTCTAAAAGTCATGGAGGCTTTTGTGA...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATCCTCCCATGCTTGCTaGCTCCAGCCACTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSSHAC*LQPLHQ Trigger: TTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACTTTCCTCCCATGCTTaGTGCCTCCAGCCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPLSSHA*CLQPLH Trigger: GTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGCAGCTTTCCTCCCATaGTTGCTGCCTCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPAAFLP*LLPPAT Trigger: AGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATGTGAAAAGACATCTTTaGCAAACTCCTGGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRDLLHSLSNPHWCKTPDVKRHL*QTPGFP Trigger: AGGAAATCCAGGAGTTTGTCAAAGATGTCTTTTCAC...ATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTGTGAAAAGACATCTTTaGCAAACTCCTGGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGVKRHL*QTPGFP Trigger: AGGAAATCCAGGAGTTTGTCAAAGATGTCTTTTCAC...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCCATGCTTTAAAACAGTaGGATAGACAGGACTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSHALKQ*DRQDSL Trigger: TAAGGAGTCCTGTCTATCTCACTGTTTTAAAGCATG...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGATATCAGCTTGTTTGTaGAGCTTCAGCATGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: WSVSRDLLHSLSNPHWCKISACL*SFSMIS Trigger: AGATATCATGCTGAAGCTTCACAAACAAGCTGATAT...CTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCTACTCTGGAAAGCAGTaGTCTACACAAAGATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSYSGKQ*STQRYS Trigger: TGAGTATCTTTGTGTAGACCACTGCTTTCCAGAGTA...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATCCAAGTCGATCCACTaGGGGCAGAGAAAGGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSKSIH*GQRKVT Trigger: CGTGACCTTTCTCTGCCCCCAGTGGATCGACTTGGA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | CTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGAGAAAGGTCACGGATaGCTGGTAATAAACTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHSLSNPHWCKTPDSWHEKGHG*LVINFR Trigger: TCGAAAGTTTATTACCAGGCATCCGTGACCTTTCTC...ATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | CTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGGAATCCCATTTGTTTaGTCCAGGTATTCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHSLSNPHWCKTPDSWHGIPFV*SRYSSQ Trigger: CTGTGATGAATACCTGGACCAAACAAATGGGATTCC...ATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCACTTTACCCATTGGTCTaGTTTGACATTTTTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPLYPLV*FDIFQN Trigger: GTTTTGAAAAATGTCAAACCAGACCAATGGGTAAAG...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCAGAGCTTTATTAGTCTaGATATTAAGAACCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSRALLV*ILRTLP Trigger: AGGGAGGGTTCTTAATATCCAGACTAATAAAGCTCT...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGGTGGGGGAAAGGGCTaGGACTTAGTAAAAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPGGGKG*DLVKTH Trigger: GTGTGTTTTTACTAAGTCTCAGCCCTTTCCCCCACC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGGTATTCATCACAGCTaGTATGGGTTTGCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPGIHHS*YGFATG Trigger: GCCAGTGGCAAACCCATAGCAGCTGTGATGAATACC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAAGTTGCCTTATGGCCTaGTTTTCCCAGTTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSCLMA*FSQFAQ Trigger: CTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACT...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTTTTAGCTTTACCCATTaGTCTGGTTTGACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPHWCKTPDSWHVSQLFGFSFTH*SGLTFF Trigger: GAAAAATGTCAAACCAGACCAATGGGTAAAGCTAAA...ACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| 3UTR CAA 72 bp | ACAATATCCGTCACTAACAGGAGAGTGTTCAACACTTaGACCATGACAGGCTTCAGGAAGTTTCACAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TISVTNRRVFNT*TMTGFRKFHSF Trigger: GAAACTGTGAAACTTCCTGAAGCCTGTCATGGTCAAAGTGTTGAACACTCTCCTGTTAGTGACGGATATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR TCA 90 bp | AATTTAATTCTGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCAAGGATCCTCACTAGTTaGAATTGTGATAGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLILECEQGPTTFIVQPPRILTS*NCDRNH Trigger: ATGGTTCCTATCACAATTTCAACTAGTGAGGATCCT...TGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCAGAATTAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR TCA 90 bp | GACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTCTAGTTTATTACTATCATTGTCAGCATCTCGCTTaGGCCAAGCAGCATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DRLQEVSQFRYALVYYYHCQHLA*AKQHST Trigger: TGTTGAATGCTGCTTGGCTCAAGCGAGATGCTGACA...ATGATAGTAATAAACTAGAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACTCCATGGCACCAGCTaGAAAGTCAGCAATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPLHGTS*KVSNSN Trigger: ATTGCTATTGCTGACTTTGCAGCTGGTGCCATGGAG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACCCAGAGATCCTCTGTaGCAGCATTCTTTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPPRDPL*QHSFVG Trigger: TCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | CTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATAGAGCTTTATTAGTCTaGATATTAAGAACCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSLSNPHWCKTPDSWHRALLV*ILRTLP Trigger: AGGGAGGGTTCTTAATATCCAGACTAATAAAGCTCT...ATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGTTCCTGTACCTGTTTaGAGAGTGCTAGGAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPVPVPV*RVLGKD Trigger: GTCTTTTCCTAGCACTCTGCAAACAGGTACAGGAAC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAATAAACTTTCGAGCATaGCAGAGCTGTACTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPINFRA*QSCTGF Trigger: GAACCCAGTACAGCTCTGCCATGCTCGAAAGTTTAT...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATCCAAAGTTGCCTTATaGCCTGCTTTTCCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSKVAL*PAFPSL Trigger: CAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTCTAGTTTATTACTATCATTTTTCACAACACTGCTaGATGGTGCGCTCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DRLQEVSQFRYALVYYYHFSQHC*MVRSAE Trigger: TTCAGCTGAGCGCACCATCCAGCAGTGTTGTGAAAA...ATGATAGTAATAAACTAGAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATTAGTAAAAACACACTaGGTTAGGTGGCGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPLVKTH*VRWRGF Trigger: AAAGCCCCGCCACCTAACCCAGTGTGTTTTTACTAA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACCCATTGGTCTGGTTTaGCATTTTTCAAAACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPPIGLV*HFSKPH Trigger: GTGTGGTTTTGAAAAATGTCAAACCAGACCAATGGG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATCACAAAAGCCTCCATaGCTTTTAGAACCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSQKPP*LLEPLQ Trigger: CTGTAGAGGTTCTAAAAGTCATGGAGGCTTTTGTGA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGAGAAAGGTCACGGATaGCTGGTAATAAACTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPEKGHG*LVINFR Trigger: TCGAAAGTTTATTACCAGGCATCCGTGACCTTTCTC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGGAATCCCATTTGTTTaGTCCAGGTATTCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPGIPFV*SRYSSQ Trigger: CTGTGATGAATACCTGGACCAAACAAATGGGATTCC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTCTAGTTTATTACTATCATATAAACTTTCGAGCATaGCAGAGCTGTACTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRLQEVSQFRYALVYYYHINFRA*QSCTGF Trigger: GAACCCAGTACAGCTCTGCCATGCTCGAAAGTTTAT...ATGATAGTAATAAACTAGAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAAGGATCCTCACTAGTTaGAATTGTGATAGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPRILTS*NCDRNH Trigger: ATGGTTCCTATCACAATTTCAACTAGTGAGGATCCT...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGTGAAAAGACATCTTTaGCAAACTCCTGGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPVKRHL*QTPGFP Trigger: AGGAAATCCAGGAGTTTGTCAAAGATGTCTTTTCAC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACATGCTTTAAAACAGTaGGATAGACAGGACTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPHALKQ*DRQDSL Trigger: TAAGGAGTCCTGTCTATCTCACTGTTTTAAAGCATG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAATATCAGCTTGTTTGTaGAGCAGAGAAAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPISACL*SREKRS Trigger: TGACCTCTTTTCTCTGCTTCACAAACAAGCTGATAT...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167806.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATACTCTGGAAAGCAGTaGTCTACACAAAGATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPYSGKQ*STQRYS Trigger: TGAGTATCTTTGTGTAGACCACTGCTTTCCAGAGTA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAATATCAGCTTGTTTGTaGAGCTTCAGCATGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPISACL*SFSMIS Trigger: AGATATCATGCTGAAGCTTCACAAACAAGCTGATAT...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACTTTACCCATTGGTCTaGTTTGACATTTTTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPLYPLV*FDIFQN Trigger: GTTTTGAAAAATGTCAAACCAGACCAATGGGTAAAG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATTTAGCTTTACCCATTaGTCTGGTTTGACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPFSFTH*SGLTFF Trigger: GAAAAATGTCAAACCAGACCAATGGGTAAAGCTAAA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCGACACAGCGGTGCAGCGGACATCTGGGCCCCACAGCAGTCCCCACTGGACAGCTGCTATGGGTTaGCCACTGGCACTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGDTAVQRTSGPHSSPHWTAAMG*PLALSK Trigger: TTTGGAAAGTGCCAGTGGCAAACCCATAGCAGCTGT...CCAGTGGGGACTGCTGTGGGGCCCAGATGTCCGCTGCACCGCTGTGTCGCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS GCA 90 bp | CTCCTTAAACCGACGACGGGCTTCTTCCAAAGTTGCCTTATGGCCTaGTTTTCCCAGTTTGCCCAGCACCAAGCCCCTCAGGAGTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKPTTGFFQSCLMA*FSQFAQHQAPQECV Trigger: GACGCACTCCTGAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCCGTCGTCGGTTTAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS GCA 90 bp | GACGGGCTTCTTCCAAAGTTGCCTTATGGCCTGCTTTTCCCAGTTTaGCCAGCACCAAGCCCCTCAGGAGTGCGTCTAGATGACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGLLPKLPYGLLFPV*PAPSPSGVRLDDLL Trigger: GAGAAGGTCATCTAGACGCACTCCTGAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CCA 90 bp | ACGTGCTCCTTAAACCGACGACGGGCTTCTTCCAAAGTTGCCTTATaGCCTGCTTTTCCCAGTTTGCCCAGCACCAAGCCCCTCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TCSLNRRRASSKVAL*PAFPSLPSTKPLRS Trigger: ACTCCTGAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCCGTCGTCGGTTTAAGGAGCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | CCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCCCTGCTTTTCCCAGTTaGCCCAGCACCAAGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHWCKTPDSWHVSQLFGSPAFPS*PSTKPL Trigger: GAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGG...GCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS GCA 90 bp | TCCTCCCAGTTGTCCTTGATGAATTTCCAAGCAGCTTTCCTCCCATaGTTGCTGCCTCCAGCCACTCCACCAATCACCGACACAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSQLSLMNFQAAFLP*LLPPATPPITDTVS Trigger: GGACACTGTGTCGGTGATTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGCTTGGAAATTCATCAAGGACAACTGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCACCGCTTTCCTCCCATGCTaGCTGCCTCCAGCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WCKTPDSWHVSQLFGSSTAFLPC*LPPATP Trigger: TGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGC...GGTGGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGCAGACGCTGATGACAACACTAACCCTGCCCTGTGTAGGGAGGTACACTCACAATTTGATTGGTaGCCTGCCTTACCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLADADDNTNPALCREVHSQFDW*PALPGR Trigger: CCGCCCAGGTAAGGCAGGCAACCAATCAAATTGTGA...GTGTACCTCCCTACACAGGGCAGGGTTAGTGTTGTCATCAGCGTCTGCAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154917.8 |
||
| CDS-3UTR CAA 90 bp | TACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGGCTTTCCTCCCATGCTaGCTGCCTCCAGCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YYIHCPTPTGVRLQILGMAFLPC*LPPATP Trigger: TGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGC...CATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGCTGTCAGCATCTCGCTaGAGCCAAGCAGCATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WSVSRDLLHSLSNPHWCKLSASR*SQAAFN Trigger: GTTGAATGCTGCTTGGCTCAAGCGAGATGCTGACAG...CTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS GCA 90 bp | TCTGTAATCCAAGTCGATCCACTGGGGGCAGAGAAAGGTCACGGATaGCTGGTAATAAACTTTCGAGCATGGCAGAGCTGTACTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVIQVDPLGAEKGHG*LVINFRAWQSCTGF Trigger: GAACCCAGTACAGCTCTGCCATGCTCGAAAGTTTATTACCAGGCATCCGTGACCTTTCTCTGCCCCCAGTGGATCGACTTGGATTACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCTCACAATTTGATTGGTaGCCTGCCTTACCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSSQFDW*PALPGR Trigger: CCGCCCAGGTAAGGCAGGCAACCAATCAAATTGTGA...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS TCA 90 bp | GGACAGTCTTCACCGCCATATGGTCCACTGGCACAAAACTTCTTCTaGGACAGCTTCAGCACTCTGTCATCTTCTACCTGTTCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQSSPPYGPLAQNFF*DSFSTLSSSTCSAS Trigger: GGAAGCTGAACAGGTAGAAGATGACAGAGTGCTGAAGCTGTCTCAGAAGAAGTTTTGTGCCAGTGGACCATATGGCGGTGAAGACTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS GCA 90 bp | ACAGGACTCCTTAGGTCAGCAGAAAGAATCTGTTTCCCTTCCACGTaGTCCTTAAACCGACGACGGGCTTCTTCCAAAGTTGCCTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLRSAERICFPST*SLNRRRASSKVALW Trigger: CCATAAGGCAACTTTGGAAGAAGCCCGTCGTCGGTTTAAGGAGCACGTGGAAGGGAAACAGATTCTTTCTGCTGACCTAAGGAGTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CCA 90 bp | GGGGCAGAGAAAGGTCACGGATGCCTGGTAATAAACTTTCGAGCATaGCAGAGCTGTACTGGGTTCGATAAAACCCAACTGTTCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GAEKGHGCLVINFRA*QSCTGFDKTQLFPD Trigger: ATCTGGGAACAGTTGGGTTTTATCGAACCCAGTACAGCTCTGCCATGCTCGAAAGTTTATTACCAGGCATCCGTGACCTTTCTCTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCATCCTCCCAGTTGTCCTaGATGAATTTCCAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPSSQLS*MNFQAA Trigger: AGCTGCTTGGAAATTCATCAAGGACAACTGGGAGGA...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS TCA 90 bp | ATTCAACAGGATATTTTCACAACACTGCTGGATGGTGCGCTCAGCTaGAGGAGCTGGGTGACTCTCGAAGAAAGCCTTAACTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQQDIFTTLLDGALS*RSWVTLEESLNFSS Trigger: GCTGGAGAAGTTAAGGCTTTCTTCGAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTGTTGTGAAAATATCCTGTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS CCA 90 bp | GAGGGAATCCCATTTGTTTGGTCCAGGTATTCATCACAGCTGCTATaGGTTTGCCACTGGCACTTTCCAAACTTTCCCAGAGATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGIPFVWSRYSSQLL*VCHWHFPNFPRDPL Trigger: CAGAGGATCTCTGGGAAAGTTTGGAAAGTGCCAGTGGCAAACCCATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGGGAATCCCATTTGTTaGGTCCAGGTATTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPGNPIC*VQVFIT Trigger: TGTGATGAATACCTGGACCAAACAAATGGGATTCCC...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGGAGAGGGAATCCCATTaGTTTGGTCCAGGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WSVSRDLLHSLSNPHWCKERESH*FGPGIH Trigger: ATGAATACCTGGACCAAACAAATGGGATTCCCTCTC...CTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS TCA 90 bp | TTTTCCGCTGAAGGAGGTACTGGTGAATGCTGTCAGCATCTCGCTTaGGCCAAGCAGCATTCAACAGGATATTTTCACAACACTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSAEGGTGECCQHLA*AKQHSTGYFHNTAG Trigger: TCCAGCAGTGTTGTGAAAATATCCTGTTGAATGCTGCTTGGCTCAAGCGAGATGCTGACAGCATTCACCAGTACCTCCTTCAGCGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS CCA 90 bp | TTTGTTTGGTCCAGGTATTCATCACAGCTGCTATGGGTTTGCCACTaGCACTTTCCAAACTTTCCCAGAGATCCTCTGTGGCAGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVWSRYSSQLLWVCH*HFPNFPRDPLWQHS Trigger: AGAATGCTGCCACAGAGGATCTCTGGGAAAGTTTGGAAAGTGCCAGTGGCAAACCCATAGCAGCTGTGATGAATACCTGGACCAAACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS CCA 90 bp | AATTGTGATAGGAACCATCCACTGAGGACAGTCTTCACCGCCATATaGTCCACTGGCACAAAACTTCTTCTGAGACAGCTTCAGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: NCDRNHPLRTVFTAI*STGTKLLLRQLQHS Trigger: AGAGTGCTGAAGCTGTCTCAGAAGAAGTTTTGTGCCAGTGGACCATATGGCGGTGAAGACTGTCCTCAGTGGATGGTTCCTATCACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | TCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGGGGAATCCCATTTGTTaGGTCCAGGTATTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLSNPHWCKTPDSWHVSQGNPIC*VQVFIT Trigger: TGTGATGAATACCTGGACCAAACAAATGGGATTCCC...CTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGTGTAAGACTCCAGATTCTTGGCATGTGAGTCAGCTGTTTGGTAGCTCCGAGAGGGAATCCCATTaGTTTGGTCCAGGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HWCKTPDSWHVSQLFGSSERESH*FGPGIH Trigger: ATGAATACCTGGACCAAACAAATGGGATTCCCTCTC...GGAGCTACCAAACAGCTGACTCACATGCCAAGAATCTGGAGTCTTACACCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACCTGCTTTTCCCAGTTaGCCCAGCACCAAGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPPAFPS*PSTKPL Trigger: GAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGCTTTCCTCCCATGCTaGCTGCCTCCAGCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPAFLPC*LPPATP Trigger: TGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS TCA 90 bp | TGGTTAGGATCCTCACTAGTTGAAATTGTGATAGGAACCATCCACTaGGGACAGTCTTCACCGCCATATGGTCCACTGGCACAAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLGSSLVEIVIGTIH*GQSSPPYGPLAQNF Trigger: GAAGTTTTGTGCCAGTGGACCATATGGCGGTGAAGACTGTCCTCAGTGGATGGTTCCTATCACAATTTCAACTAGTGAGGATCCTAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS TCA 90 bp | ACCTTCTCCAGGTTTGGGGTCCCAGCCCAATCTCTCTCCTATAGGTaGAAAGACATCTTTGACAAACTCCTGGATTTCCTCATAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TFSRFGVPAQSLSYR*KDIFDKLLDFLIEV Trigger: GACTTCTATGAGGAAATCCAGGAGTTTGTCAAAGATGTCTTTTCACCTATAGGAGAGAGATTGGGCTGGGACCCCAAACCTGGAGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS TCA 90 bp | GGCTTTATTAGTCTGGATATTAAGAACCCTCCCTGGTACCGGTTGTaGAGCTCCTCCCAGTTGTCCTTGATGAATTTCCAAGCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFISLDIKNPPWYRL*SSSQLSLMNFQAAF Trigger: GAAAGCTGCTTGGAAATTCATCAAGGACAACTGGGAGGAGCTTCACAACCGGTACCAGGGAGGGTTCTTAATATCCAGACTAATAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172108.8 |
||
| CDS GCA 90 bp | AATGAGAGGGAATCCCATTTGTTTGGTCCAGGTATTCATCACAGCTaGTATGGGTTTGCCACTGGCACTTTCCAAACTTTCCCAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: NERESHLFGPGIHHS*YGFATGTFQTFPEI Trigger: GATCTCTGGGAAAGTTTGGAAAGTGCCAGTGGCAAACCCATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATTCCCTCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | AATTTAATTCTGGAGTGTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCAGGGCTTCTTCCAAAGTaGCCTTATGGCCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLILECEQGPTTFIVQPPGLLPK*PYGLLF Trigger: GAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCC...TGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCACACTCCAGAATTAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCAGGGACCTACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCATTCTTGCATATCAGCTaGTTTGTGAAGCTTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSRDLLHSLSNPHWCKTPFLHIS*FVKLQH Trigger: ATGCTGAAGCTTCACAAACAAGCTGATATGCAAGAA...TGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTAGGTCCCTGCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS TCA 90 bp | GCTTCAGCACTCTGTCATCTTCTACCTGTTCAGCTTCCACATAAATaGGAGGGAATCCCATTTGTTTGGTCCAGGTATTCATCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASALCHLLPVQLPHK*EGIPFVWSRYSSQL Trigger: CAGCTGTGATGAATACCTGGACCAAACAAATGGGATTCCCTCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGAGTGCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS TCA 90 bp | AAACTCCTGGATTTCCTCATAGAAGTCTGTGTGGGACAAGAGAGTTaGAAGAATCCCCAGGTTACAGCTCAGGTCGCTCCATACAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: KLLDFLIEVCVGQES*KNPQVTAQVAPYSI Trigger: TATACTGTATGGAGCGACCTGAGCTGTAACCTGGGGATTCTTTCAACTCTCTTGTCCCACACAGACTTCTATGAGGAAATCCAGGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS TCA 90 bp | AGCTTTATTAGTCTGGATATTAAGAACCCTCCCTGGTACCGGTTGTaGAGCTCCTCCCAGTTGTCCTTGATGAATTTCCAAGCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFISLDIKNPPWYRL*SSSQLSLMNFQAAF Trigger: GAAAGCTGCTTGGAAATTCATCAAGGACAACTGGGAGGAGCTTCACAACCGGTACCAGGGAGGGTTCTTAATATCCAGACTAATAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAAGGTCTTAGCAGCAACCTCGAGCGCAAACTTTCCTTGCTCTGCTTTGAGGATAATTACCTGTTaGCAGAGTGCTAGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGKVLAATSSANFPCSALRIITC*QSARKR Trigger: TCTTTTCCTAGCACTCTGCAAACAGGTAATTATCCT...CAAAGCAGAGCAAGGAAAGTTTGCGCTCGAGGTTGCTGCTAAGACCTTGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154372.9 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATCACAATTTGATTGGTaGCCTGCCTTACCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSQFDW*PALPGR Trigger: CCGCCCAGGTAAGGCAGGCAACCAATCAAATTGTGA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCACTGTCAGCATCTCGCTaGAGCCAAGCAGCATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPLSASR*SQAAFN Trigger: GTTGAATGCTGCTTGGCTCAAGCGAGATGCTGACAG...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR CAA 90 bp | GACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTCTAGTTTATTACTATCATTCACAATTTGATTGGTaGCCTGCCTTACCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DRLQEVSQFRYALVYYYHSQFDW*PALPGR Trigger: CCGCCCAGGTAAGGCAGGCAACCAATCAAATTGTGA...ATGATAGTAATAAACTAGAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGGGCTTCTTCCAAAGTaGCCTTATGGCCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPGLLPK*PYGLLF Trigger: GAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | TACTACATTCATTGTCCAACCCCCACTGGTGTAAGACTCCAGATTCTTGGCATGTTCTTGCATATCAGCTaGTTTGTGAAGCTTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YYIHCPTPTGVRLQILGMFLHIS*FVKLQH Trigger: ATGCTGAAGCTTCACAAACAAGCTGATATGCAAGAA...CATGCCAAGAATCTGGAGTCTTACACCAGTGGGGGTTGGACAATGAATGTAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS CCA 90 bp | ACCACACTCATCTCTGGCTTATCCATTAGTATTTTCAGCTTAGCCTaGTTAGGATCCTCACTAGTTGAAATTGTGATAGGAACCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TTLISGLSISIFSLA*LGSSLVEIVIGTIH Trigger: GTGGATGGTTCCTATCACAATTTCAACTAGTGAGGATCCTAACCAGGCTAAGCTGAAAATACTAATGGATAAGCCAGAGATGAGTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATCCTCCCAGTTGTCCTaGATGAATTTCCAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPSSQLS*MNFQAA Trigger: AGCTGCTTGGAAATTCATCAAGGACAACTGGGAGGA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGGGAATCCCATTTGTTaGGTCCAGGTATTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPGNPIC*VQVFIT Trigger: TGTGATGAATACCTGGACCAAACAAATGGGATTCCC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCAGAGAGGGAATCCCATTaGTTTGGTCCAGGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPERESH*FGPGIH Trigger: ATGAATACCTGGACCAAACAAATGGGATTCCCTCTC...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGCTTCAGGAAGTTTCACAGTTTCGTTATGCTCTAGTTTATTACTATCATTCCTCCCAGTTGTCCTaGATGAATTTCCAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DRLQEVSQFRYALVYYYHSSQLS*MNFQAA Trigger: AGCTGCTTGGAAATTCATCAAGGACAACTGGGAGGA...ATGATAGTAATAAACTAGAGCATAACGAAACTGTGAAACTTCCTGAAGCCTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001480.14 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATTCTTGCATATCAGCTaGTTTGTGAAGCTTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPFLHIS*FVKLQH Trigger: ATGCTGAAGCTTCACAAACAAGCTGATATGCAAGAA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000172108.8 |
||
| CDS-3UTR CAA 90 bp | ACAATAGCACAAAAATGTTTCAAGGAAGCAGTCTCACAATCTGATGACCTTCCATTCTTGCATATCAGCTaGTTTGTGAAGCAGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TIAQKCFKEAVSQSDDLPFLHIS*FVKQRK Trigger: TTTTCTCTGCTTCACAAACAAGCTGATATGCAAGAA...TGGAAGGTCATCAGATTGTGAGACTGCTTCCTTGAAACATTTTTGTGCTATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167806.8 |
||
| CDS GCA 72 bp | CCGACGACGGGCTTCTTCCAAAGTTGCCTTATGGCCTaGTTTTCCCAGTTTGCCCAGCACCAAGCCCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTTGFFQSCLMA*FSQFAQHQAPQ Trigger: CTGAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCCGTCGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS GCA 72 bp | CCTCCAGCCACTCCACCAATCACCGACACAGTGTCCTaGGGACGGACCTCTTCTGAAAGTGCAAAAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPATPPITDTVS*GRTSSESAKVR Trigger: CCTTACTTTTGCACTTTCAGAAGAGGTCCGTCCGCAGGACACTGTGTCGGTGATTGGTGGAGTGGCTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CAA 90 bp | TCCCAGTTGTCCTTGATGAATTTCCAAGCAGCTTTCCTCCCATGCTaGCTGCCTCCAGCCACTCCACCAATCACCGACACAGTGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQLSLMNFQAAFLPC*LPPATPPITDTVSC Trigger: GCAGGACACTGTGTCGGTGATTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGCTTGGAAATTCATCAAGGACAACTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS TCA 72 bp | CACTGCTGGATGGTGCGCTCAGCTGAAGGAGCTGGGTaGCTCTCGAAGAAAGCCTTAACTTCTCCAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: HCWMVRSAEGAG*LSKKALTSPAI Trigger: AATGGCTGGAGAAGTTAAGGCTTTCTTCGAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
||
| CDS GCA 72 bp | CTTCCAAAGTTGCCTTATGGCCTGCTTTTCCCAGTTTaGCCAGCACCAAGCCCCTCAGGAGTGCGTCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPKLPYGLLFPV*PAPSPSGVRLD Trigger: ATCTAGACGCACTCCTGAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CCA 72 bp | TTAAACCGACGACGGGCTTCTTCCAAAGTTGCCTTATaGCCTGCTTTTCCCAGTTTGCCCAGCACCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LNRRRASSKVAL*PAFPSLPSTKP Trigger: GGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAGAAGCCCGTCGTCGGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CAA 72 bp | TCTTCCAAAGTTGCCTTATGGCCTGCTTTTCCCAGTTaGCCCAGCACCAAGCCCCTCAGGAGTGCGTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSKVALWPAFPS*PSTKPLRSASR Trigger: TCTAGACGCACTCCTGAGGGGCTTGGTGCTGGGCAAACTGGGAAAAGCAGGCCATAAGGCAACTTTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS GCA 72 bp | CAAGTCGATCCACTGGGGGCAGAGAAAGGTCACGGATaGCTGGTAATAAACTTTCGAGCATGGCAGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QVDPLGAEKGHG*LVINFRAWQSC Trigger: ACAGCTCTGCCATGCTCGAAAGTTTATTACCAGGCATCCGTGACCTTTCTCTGCCCCCAGTGGATCGACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
||
| CDS GCA 72 bp | TTGTCCTTGATGAATTTCCAAGCAGCTTTCCTCCCATaGTTGCTGCCTCCAGCCACTCCACCAATCACCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSLMNFQAAFLP*LLPPATPPITD Trigger: GTCGGTGATTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGCTTGGAAATTCATCAAGGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CAA 72 bp | TCCTTGATGAATTTCCAAGCAGCTTTCCTCCCATGCTaGCTGCCTCCAGCCACTCCACCAATCACCGACACA | + |
|
Preference number: 6 (lower is better) Translates to: SLMNFQAAFLPC*LPPATPPITDT Trigger: TGTGTCGGTGATTGGTGGAGTGGCTGGAGGCAGCAAGCATGGGAGGAAAGCTGCTTGGAAATTCATCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
||
| CDS CCA 72 bp | TCCACTGAGGACAGTCTTCACCGCCATATGGTCCACTaGCACAAAACTTCTTCTGAGACAGCTTCAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: STEDSLHRHMVH*HKTSSETASAL Trigger: GAGTGCTGAAGCTGTCTCAGAAGAAGTTTTGTGCCAGTGGACCATATGGCGGTGAAGACTGTCCTCAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CCA 72 bp | CAGCATTCAACAGGATATTTTCACAACACTGCTGGATaGTGCGCTCAGCTGAAGGAGCTGGGTGACTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: QHSTGYFHNTAG*CAQLKELGDSR Trigger: TCGAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTGTTGTGAAAATATCCTGTTGAATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS TCA 72 bp | GATATTTTCACAACACTGCTGGATGGTGCGCTCAGCTaGAGGAGCTGGGTGACTCTCGAAGAAAGCCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: DIFTTLLDGALS*RSWVTLEESLN Trigger: GTTAAGGCTTTCTTCGAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTGTTGTGAAAATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS GCA 72 bp | CATTCAACAGGATATTTTCACAACACTGCTGGATGGTaGGCTCAGCTGAAGGAGCTGGGTGACTCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HSTGYFHNTAGW*AQLKELGDSRR Trigger: TCTTCGAGAGTCACCCAGCTCCTTCAGCTGAGCGCACCATCCAGCAGTGTTGTGAAAATATCCTGTTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS CCA 72 bp | TCCAGGTATTCATCACAGCTGCTATGGGTTTGCCACTaGCACTTTCCAAACTTTCCCAGAGATCCTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRYSSQLLWVCH*HFPNFPRDPLW Trigger: CCACAGAGGATCTCTGGGAAAGTTTGGAAAGTGCCAGTGGCAAACCCATAGCAGCTGTGATGAATACCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CCA 72 bp | AGGAACCATCCACTGAGGACAGTCTTCACCGCCATATaGTCCACTGGCACAAAACTTCTTCTGAGACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RNHPLRTVFTAI*STGTKLLLRQL Trigger: AAGCTGTCTCAGAAGAAGTTTTGTGCCAGTGGACCATATGGCGGTGAAGACTGTCCTCAGTGGATGGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | TCACCGCCATATGGTCCACTGGCACAAAACTTCTTCTaGGACAGCTTCAGCACTCTGTCATCTTCTACCTGT | + |
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Preference number: 6 (lower is better) Translates to: SPPYGPLAQNFF*DSFSTLSSSTC Trigger: ACAGGTAGAAGATGACAGAGTGCTGAAGCTGTCTCAGAAGAAGTTTTGTGCCAGTGGACCATATGGCGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | TCCTCACTAGTTGAAATTGTGATAGGAACCATCCACTaGGGACAGTCTTCACCGCCATATGGTCCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLVEIVIGTIH*GQSSPPYGPLA Trigger: TGCCAGTGGACCATATGGCGGTGAAGACTGTCCTCAGTGGATGGTTCCTATCACAATTTCAACTAGTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | GATTTCCTCATAGAAGTCTGTGTGGGACAAGAGAGTTaGAAGAATCCCCAGGTTACAGCTCAGGTCGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: DFLIEVCVGQES*KNPQVTAQVAP Trigger: TGGAGCGACCTGAGCTGTAACCTGGGGATTCTTTCAACTCTCTTGTCCCACACAGACTTCTATGAGGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
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| CDS GCA 72 bp | CTTAGGTCAGCAGAAAGAATCTGTTTCCCTTCCACGTaGTCCTTAAACCGACGACGGGCTTCTTCCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LRSAERICFPST*SLNRRRASSKV Trigger: AACTTTGGAAGAAGCCCGTCGTCGGTTTAAGGAGCACGTGGAAGGGAAACAGATTCTTTCTGCTGACCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
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| CDS CAA 90 bp | AATCCCATTTGTTTGGTCCAGGTATTCATCACAGCTGCTATGGGTTaGCCACTGGCACTTTCCAAACTTTCCCAGAGATCCTCTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: NPICLVQVFITAAMG*PLALSKLSQRSSVA Trigger: TGCCACAGAGGATCTCTGGGAAAGTTTGGAAAGTGCCAGTGGCAAACCCATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CAA 90 bp | CAAACTCCTGGATTTCCTCATAGAAGTCTGTGTGGGACAAGAGAGTaGAAAGAATCCCCAGGTTACAGCTCAGGTCGCTCCATACAGTAT | + |
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Preference number: 6 (lower is better) Translates to: QTPGFPHRSLCGTRE*KESPGYSSGRSIQY Trigger: ATACTGTATGGAGCGACCTGAGCTGTAACCTGGGGATTCTTTCAACTCTCTTGTCCCACACAGACTTCTATGAGGAAATCCAGGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | AGTCTGGATATTAAGAACCCTCCCTGGTACCGGTTGTaGAGCTCCTCCCAGTTGTCCTTGATGAATTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SLDIKNPPWYRL*SSSQLSLMNFQ Trigger: TTGGAAATTCATCAAGGACAACTGGGAGGAGCTTCACAACCGGTACCAGGGAGGGTTCTTAATATCCAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | GAAGGAGGTACTGGTGAATGCTGTCAGCATCTCGCTTaGGCCAAGCAGCATTCAACAGGATATTTTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: EGGTGECCQHLA*AKQHSTGYFHN Trigger: GTTGTGAAAATATCCTGTTGAATGCTGCTTGGCTCAAGCGAGATGCTGACAGCATTCACCAGTACCTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 |
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| CDS CCA 72 bp | AAAGGTCACGGATGCCTGGTAATAAACTTTCGAGCATaGCAGAGCTGTACTGGGTTCGATAAAACCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: KGHGCLVINFRA*QSCTGFDKTQL Trigger: CAGTTGGGTTTTATCGAACCCAGTACAGCTCTGCCATGCTCGAAAGTTTATTACCAGGCATCCGTGACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CAA 72 bp | CTGTTCAGCTTCCACATAAATGAGAGGGAATCCCATTaGTTTGGTCCAGGTATTCATCACAGCTGCTATGGG | + |
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Preference number: 6 (lower is better) Translates to: LFSFHINERESH*FGPGIHHSCYG Trigger: CCCATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATTCCCTCTCATTTATGTGGAAGCTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CAA 90 bp | ATCTTCTACCTGTTCAGCTTCCACATAAATGAGAGGGAATCCCATTaGTTTGGTCCAGGTATTCATCACAGCTGCTATGGGTTTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: IFYLFSFHINERESH*FGPGIHHSCYGFAT Trigger: AGTGGCAAACCCATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATTCCCTCTCATTTATGTGGAAGCTGAACAGGTAGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | CTCTGTCATCTTCTACCTGTTCAGCTTCCACATAAATaGGAGGGAATCCCATTTGTTTGGTCCAGGTATTCA | + |
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Preference number: 6 (lower is better) Translates to: LCHLLPVQLPHK*EGIPFVWSRYS Trigger: TGAATACCTGGACCAAACAAATGGGATTCCCTCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS TCA 72 bp | TATTTTCAGCTTAGCCTGGTTAGGATCCTCACTAGTTaGAATTGTGATAGGAACCATCCACTGAGGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: YFQLSLVRILTS*NCDRNHPLRTV Trigger: GACTGTCCTCAGTGGATGGTTCCTATCACAATTTCAACTAGTGAGGATCCTAACCAGGCTAAGCTGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CAA 72 bp | ACTGTTCCCAGATTTAGCTTTACCCATTGGTCTGGTTaGACATTTTTCAAAACCACACTCATCTCTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: TVPRFSFTHWSG*TFFKTTLISGL Trigger: TAAGCCAGAGATGAGTGTGGTTTTGAAAAATGTCAAACCAGACCAATGGGTAAAGCTAAATCTGGGAACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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| CDS CCA 72 bp | ATCTCTGGCTTATCCATTAGTATTTTCAGCTTAGCCTaGTTAGGATCCTCACTAGTTGAAATTGTGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: ISGLSISIFSLA*LGSSLVEIVIG Trigger: TCCTATCACAATTTCAACTAGTGAGGATCCTAACCAGGCTAAGCTGAAAATACTAATGGATAAGCCAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001480.14 ENSMUST00000165216.8 ENSMUST00000167806.8 ENSMUST00000172108.8 |
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