Pregenerated sensors for NPEPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039263Ensembl transcript IDs: ENSMUST00000044415.16, ENSMUST00000125502.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGCTTaGGGGCTGCTGGGTGGAGTGGTTCTGTACCTCAGCCTCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: SSTSHLRPRRASEGA*GLLGGVVLYLSLRQ Trigger: CTGTCTGAGGCTGAGGTACAGAACCACTCCACCCAGCAGCCCTCAAGCTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR TCA 90 bp | CAGTGCAAGCGTGACAGGGAGCCTTACTTCCCCGAGTACAGCAGGTaGATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTCG | + |
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Preference number: 1 (lower is better) Translates to: QCKRDREPYFPEYSR*MSSGLVALGPTAFS Trigger: CGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCTCCCTGTCACGCTTGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 90 bp | GGGAGCCTTACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTaGTGGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGAACACAG | + |
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Preference number: 1 (lower is better) Translates to: GSLTSPSTAGECHPA*WHWVQLHSRPSRTQ Trigger: CTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 90 bp | ACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTaGGTCCAACTGCATTCTCGGCCAAGCAGAACACAGCATGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TSPSTAGECHPAWWH*VQLHSRPSRTQHGG Trigger: ACCTCCATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 90 bp | AGCCTTACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTaGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGAACACAGCAT | + |
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Preference number: 1 (lower is better) Translates to: SLTSPSTAGECHPAW*HWVQLHSRPSRTQH Trigger: ATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR GCA 90 bp | GTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTaGATTCTCGGCCAAGCAGAACACAGCATGGAGGTTATCTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: VQQVNVIRPGGIGSN*ILGQAEHSMEVIFE Trigger: TTCAAAGATAACCTCCATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR GCA 90 bp | TTCTCGGCCAAGCAGAACACAGCATGGAGGTTATCTTTGAAACCCTaGAGGACATTTCCTTGCCAGCATGTCTTAGATGGCAGGGCAACA | + |
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Preference number: 1 (lower is better) Translates to: FSAKQNTAWRLSLKP*RTFPCQHVLDGRAT Trigger: TGTTGCCCTGCCATCTAAGACATGCTGGCAAGGAAATGTCCTGCAGGGTTTCAAAGATAACCTCCATGCTGTGTTCTGCTTGGCCGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR GCA 90 bp | AACACAGCATGGAGGTTATCTTTGAAACCCTGCAGGACATTTCCTTaGCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: NTAWRLSLKPCRTFP*QHVLDGRATGVKAF Trigger: GAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCAAGGAAATGTCCTGCAGGGTTTCAAAGATAACCTCCATGCTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 90 bp | GACAAGGTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAACTaGGGGTTGGTGGGAGCTGTGAGGGTCTCCTGCTTCACAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: DKVMLWPYLIQLQVN*GLVGAVRVSCFTEW Trigger: CCATTCTGTGAAGCAGGAGACCCTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCACAACATAACCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR-3UTR GCA 90 bp | CTTACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGGTCCCTTCTGCAAACACGTaGGCCCATGGCTGTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LTSPSTAGECHPAWWHWVPSANT*AHGCSL Trigger: AAGGGAACAGCCATGGGCGCACGTGTTTGCAGAAGG...GACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTAGGACTTCTCTGGTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAACAGGGAGCCCCAGCTTaGGCAAGGGCCTGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: CPRTSLVGTVRFMFRVEEQGAPA*ARAWVR Trigger: CCTGACCCAGGCCCTTGCTCAAGCTGGGGCTCCCTG...TTCCTCAACTCTGAACATGAATCTCACAGTTCCTACCAGAGAAGTCCTAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR-3UTR TCA 90 bp | GGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATATGGCGAGCGAGGGAGCTTaGGGGCTGCTGGGTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: GTVRFMFRVEESQVYPNMASEGA*GLLGGV Trigger: CACTCCACCCAGCAGCCCTCAAGCTCCCTCGCTCGC...CATATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR-3UTR GCA 90 bp | CGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTTGCAGGACATTTCCTTaGCAGCATGTCTTAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: RVQQVNVIRPGGIGSNCICRTFP*QHVLDG Trigger: GCCATCTAAGACATGCTGGCAAGGAAATGTCCTGCA...AATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCGTGACAGGGAGCCTTACTTCCCCGAGTACAGCAGGTGAATGTCATCCGAAGCAGAACACAGCATaGAGGTTATCTTTGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: ASVTGSLTSPSTAGECHPKQNTA*RLSLKP Trigger: GGGTTTCAAAGATAACCTCCATGCTGTGTTCTGCTT...CGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCTCCCTGTCACGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CAA 90 bp | GTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTaGGTGGGAGCTGTGAGGGTCTCCTGCTTCACAGAATGGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VMLWPYLIQLQVNWG*VGAVRVSCFTEWGP Trigger: GGGACCCCATTCTGTGAAGCAGGAGACCCTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCACAACATAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGCGGAGACAAGGTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAATCAGTCAGTGCAAAATaGGGTAAGGAACCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SERRQGYVVAIFNSTSSESVSAK*GKEPCV Trigger: GACACAGGGTTCCTTACCTCATTTTGCACTGACTGA...TTCACTTGAAGTTGAATTAAATATGGCCACAACATAACCTTGTCTCCGCTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR CCA 72 bp | GGCCCAGGAGAGCGAGCGAGGGAGCTTGAGGGCTGCTaGGTGGAGTGGTTCTGTACCTCAGCCTCAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: GPGERARELEGC*VEWFCTSASDR Trigger: CCTGTCTGAGGCTGAGGTACAGAACCACTCCACCCAGCAGCCCTCAAGCTCCCTCGCTCGCTCTCCTGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR TCA 72 bp | AGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGCTTaGGGGCTGCTGGGTGGAGTGGTTCTGTACCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SHLRPRRASEGA*GLLGGVVLYLS Trigger: GCTGAGGTACAGAACCACTCCACCCAGCAGCCCTCAAGCTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR TCA 72 bp | AGGGCCTGGGTCAGGAAGTACACTCACTACAGAGGGTaGCCTGAGGTGGCTCTAAAGACCAGGGTGGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: RAWVRKYTHYRG*PEVALKTRVED Trigger: GTCCTCCACCCTGGTCTTTAGAGCCACCTCAGGTCACCCTCTGTAGTGAGTGTACTTCCTGACCCAGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR TCA 72 bp | CGTGACAGGGAGCCTTACTTCCCCGAGTACAGCAGGTaGATGTCATCCGGCCTGGTGGCATTGGGTCCAACT | + |
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Preference number: 3 (lower is better) Translates to: RDREPYFPEYSR*MSSGLVALGPT Trigger: AGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCTCCCTGTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 72 bp | TCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTaGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SPSTAGECHPAW*HWVQLHSRPSR Trigger: TCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 72 bp | ACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTaGTGGCATTGGGTCCAACTGCATTCTCGGCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: TSPSTAGECHPA*WHWVQLHSRPS Trigger: GCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR TCA 72 bp | CTGGGTCAGGAAGTACACTCACTACAGAGGGTGACCTaGGGTGGCTCTAAAGACCAGGGTGGAGGACAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LGQEVHSLQRVT*GGSKDQGGGQG Trigger: CCCTTGTCCTCCACCCTGGTCTTTAGAGCCACCTCAGGTCACCCTCTGTAGTGAGTGTACTTCCTGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR CCA 72 bp | CCCCACCAAGCCCCTAAGCTGCTTCTAAGAGAAGAATaGCTCACTCCTGTCACCACTGGGCACGGAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: PHQAPKLLLREE*LTPVTTGHGRR Trigger: TCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTCTTAGAAGCAGCTTAGGGGCTTGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR GCA 72 bp | GTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTaGATTCTCGGCCAAGCAGAACACAGCATGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: VNVIRPGGIGSN*ILGQAEHSMEV Trigger: AACCTCCATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 72 bp | ACAGGAGTAAAGGCCTTCTGCAAACACGTGCGCCCATaGCTGTTCCCTTCAGAGAACCTTCAGCAAGCACCC | + |
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Preference number: 3 (lower is better) Translates to: TGVKAFCKHVRP*LFPSENLQQAP Trigger: GGGTGCTTGCTGAAGGTTCTCTGAAGGGAACAGCCATGGGCGCACGTGTTTGCAGAAGGCCTTTACTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR-3UTR CAA 90 bp | GTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATAGCGAGCGAGGGAGCTaGAGGGCTGCTGGGTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: VGTVRFMFRVEESQVYPNSERGS*RAAGWS Trigger: ACTCCACCCAGCAGCCCTCAAGCTCCCTCGCTCGCT...ATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR CCA 72 bp | AGACCAGGGTGGAGGACAAGGGACAGAGCTTACAGATaGAGACCTATGGGGTCTGTGACAATTTTCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RPGWRTRDRAYR*RPMGSVTIFSR Trigger: TCTGGAGAAAATTGTCACAGACCCCATAGGTCTCCATCTGTAAGCTCTGTCCCTTGTCCTCCACCCTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| 3UTR CCA 72 bp | ACCCTGCAGGACATTTCCTTGCCAGCATGTCTTAGATaGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAACA | + |
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Preference number: 3 (lower is better) Translates to: TLQDISLPACLR*QGNRSKGLLQT Trigger: TGTTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCAAGGAAATGTCCTGCAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| 3UTR CCA 72 bp | ATGTTGTGGCCATATTTAATTCAACTTCAAGTGAACTaGGGGTTGGTGGGAGCTGTGAGGGTCTCCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: MLWPYLIQLQVN*GLVGAVRVSCF Trigger: GAAGCAGGAGACCCTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCACAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | ACATCTACCCAGGGCTGGCTAGACACCCCAGGGAGCCCCAGCTTGAGCAAGGGCACGCGGTGCAGGTGTTaGAGCTGGCCCAACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSTQGWLDTPGSPSLSKGTRCRC*SWPNSS Trigger: GCTGCTGTTGGGCCAGCTGCAACACCTGCACCGCGT...GCCCTTGCTCAAGCTGGGGCTCCCTGGGGTGTCTAGCCAGCCCTGGGTAGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CCA 90 bp | GCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGTCCCCGGCGCTGGCCTaGAACTGCAGCCCCACGCTC | + |
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Preference number: 4 (lower is better) Translates to: AVKPVPLAISGPGERARESPALA*NCSPTL Trigger: GAGCGTGGGGCTGCAGTTCCAGGCCAGCGCCGGGGA...CTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | GCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGCTCCAGGGCACGCGGTaGAGGTGTTGCAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AVKPVPLAISGPGERARELQGTR*RCCSWP Trigger: GGGCCAGCTGCAACACCTGCACCGCGTGCCCTGGAG...CTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CCA 90 bp | GGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGCAGCGATGTCCAGGTaGACCCAGACCCCGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GCKTSSTSHLRPRRASEGAAMSR*TQTPGQ Trigger: CTGGCCCGGGGTCTGGGTCCACCTGGACATCGCTGC...TCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR TCA 90 bp | GAGAAGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGAAGCCAAACTCGCCAGAGCTCCTCGGTaGCCCGGGGCTGCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EKNGSLLSPLGTEGEAKLARAPR*PGAAAS Trigger: GGAAGCTGCAGCCCCGGGTCACCGAGGAGCTCTGGC...GAGTTTGGCTTCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | GAGAAGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGAAGCCAAACTCGGCTCCCAGGACGGCTaGCGCACCCCCACAGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: EKNGSLLSPLGTEGEAKLGSQDG*RTPTVS Trigger: CGAGACTGTGGGGGTGCGGCAGCCGTCCTGGGAGCC...GAGTTTGGCTTCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CCA 90 bp | GTGGCTCTAAAGACCAGGGTGGAGGACAAGGGACAGAGCTTACAGATGGAGACCAGCTTCCCGCGGACGTaGCTCCAGGGCACGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VALKTRVEDKGQSLQMETSFPRT*LQGTRC Trigger: GCACCGCGTGCCCTGGAGCCACGTCCGCGGGAAGCT...GGTCTCCATCTGTAAGCTCTGTCCCTTGTCCTCCACCCTGGTCTTTAGAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR TCA 90 bp | GTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTCGGCCAAGCACCCCTGAGCGGTGTGTaGAGAGTGGGAAGGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: VNVIRPGGIGSNCILGQAPLSGV*RVGRPV Trigger: CACGGGCCTTCCCACTCTTCACACACCGCTCAGGGG...TGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS-3UTR CCA 90 bp | CTGGGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGATGGCCAGAGCGGGTaGATGGAGGGCAGCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LGCKTSSTSHLRPRRASEDGQSG*MEGSFA Trigger: GGCAAAGCTGCCCTCCATCCACCCGCTCTGGCCATC...CTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR TCA 90 bp | GCTGCTTCTAAGAGAAGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGCCCCTGAGCGGTGTGTaGAGAGTGGGAAGGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: AASKRRMAHSCHHWARKEPLSGV*RVGRPV Trigger: CACGGGCCTTCCCACTCTTCACACACCGCTCAGGGG...CTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTCTTAGAAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR TCA 90 bp | CCCAGGGAGCCCCAGCTTGAGCAAGGGCCTGGGTCAGGAAGTACACTCACTACATGGCCATGTCCACGATaGTGTCAGCCCCCAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PREPQLEQGPGSGSTLTTWPCPR*CQPPGL Trigger: AAGACCTGGGGGCTGACATCATCGTGGACATGGCCA...TGTAGTGAGTGTACTTCCTGACCCAGGCCCTTGCTCAAGCTGGGGCTCCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | GCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGCTGCCAGCACCAGCCTaGCCTCAGCATCCGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: AVKPVPLAISGPGERARELPAPA*PQHPCC Trigger: ACAACACGGATGCTGAGGGCAGGCTGGTGCTGGCAG...CTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CCA 90 bp | GGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGACTCGCCAGCATGCACTaGAGCAGCGATGTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GCKTSSTSHLRPRRASEGLASMH*SSDVQV Trigger: CACCTGGACATCGCTGCTCCAGTGCATGCTGGCGAG...TCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | GGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGACGGTGTCATAGACGATaGCCTTGCCCACCCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GCKTSSTSHLRPRRASEGRCHRR*PCPPRQ Trigger: TTGCCTGGGTGGGCAAGGGCATCGTCTATGACACCG...TCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | CTCTGGGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGCAGCCCCCAGGTCTTTaGAAGCGTAAGACACCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LWAVKPVPLAISGPGERAQPPGL*KRKTPR Trigger: ACGGGGTGTCTTACGCTTGCAAAGACCTGGGGGCTG...CGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | CTGGGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGTTGGTGAGCACGGCTaGATGGTACTTCCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGCKTSSTSHLRPRRASEVGEHG*MVLPCG Trigger: GCCACAGGGAAGTACCATGCAGCCGTGCTCACCAAC...CTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR TCA 90 bp | GCTGCTTCTAAGAGAAGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGACTCGGCGCTGTTGGTaGGCACGGCTGCATGGTACT | + |
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Preference number: 4 (lower is better) Translates to: AASKRRMAHSCHHWARKETRRCW*ARLHGT Trigger: AGTACCATGCAGCCGTGCTCACCAACAGCGCCGAGT...CTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTCTTAGAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR GCA 90 bp | CCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGGGAGCTGTGAGGGTCTCGGTGACCCGGGGCTaGAGCTTCCCGCGGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYLIQLQVNWGLVGAVRVSVTRG*SFPRTW Trigger: CCACGTCCGCGGGAAGCTGCAGCCCCGGGTCACCGA...GACCCTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGCATAGACGATGCCCTTaGCCACCCAGGCAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWAVKPVPLAISGPGERAHRRCP*PPRQWS Trigger: AGACCATTGCCTGGGTGGGCAAGGGCATCGTCTATG...CGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTCGGCGGTGTCATAGACGATaGCCTTGCCCACCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TAGECHPAWWHWVQLHSRRCHRR*PCPPRQ Trigger: TTGCCTGGGTGGGCAAGGGCATCGTCTATGACACCG...CCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR TCA 90 bp | AGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGAAGCCAAACTCATCTCCCGAGTACAGCAGGTaGATGTCATCCGGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMAHSCHHWARKEKPNSSPEYSR*MSSGLV Trigger: CACCAGGCCGGATGACATTCACCTGCTGTACTCGGG...AGATGAGTTTGGCTTCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAAGCGGTGTGTGAAGAGTaGGAAGGCCCGTGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCQHVLDGRATGVKAFCKAVCEE*EGPCQG Trigger: GCCTTGGCACGGGCCTTCCCACTCTTCACACACCGC...TTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | ACATCTACCCAGGGCTGGCTAGACACCCCAGGGAGCCCCAGCTTGAGCAAGGGCTTCCTCCAAATCCTTTaGTCTTTAGCTGCTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTQGWLDTPGSPSLSKGFLQIL*SLAAHR Trigger: GCGATGAGCAGCTAAAGACCAAAGGATTTGGAGGAA...GCCCTTGCTCAAGCTGGGGCTCCCTGGGGTGTCTAGCCAGCCCTGGGTAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAAGATGGCCAGAGCGGGTaGATGGAGGGCAGCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCQHVLDGRATGVKAFCKDGQSG*MEGSFA Trigger: GGCAAAGCTGCCCTCCATCCACCCGCTCTGGCCATC...TTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAACACGTGCGCTGCCCACCCAGGCAATaGTCTGTGTGGCCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVLDGRATGVKAFCKHVRCPPRQ*SVWPHQ Trigger: CTGATGGGGCCACACAGACCATTGCCTGGGTGGGCA...GCGCACGTGTTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCTAAGAGAAGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGAAGGCAGAGCTGCCACTGTaGCGCAGTTCAGGTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASKRRMAHSCHHWARKEKAELPL*RSSGRE Trigger: CTCTCTACCTGAACTGCGCCACAGTGGCAGCTCTGC...CTTCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTCTTAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | GCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGGTCTCGCTTCATCCCTaGCATAGTGGTCTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVKPVPLAISGPGERAREVSLHP*HSGLSF Trigger: AAAGGAAAGACCACTATGCCAGGGATGAAGCGAGAC...CTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | GCTTCTAAGAGAAGAATGGCTCACTCCTGTCACCACTGGGCACGGAAGGAGAAGCATGGTACTTCCCTGTaGCAATGCCTTGTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASKRRMAHSCHHWARKEKHGTSL*QCLVPL Trigger: CAGGGGCACAAGGCATTGCCACAGGGAAGTACCATG...CTTCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAGCCATTCTTCTCTTAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | CGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTGTGTTCATCTCATTaGACGGCGTGTCCACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RVQQVNVIRPGGIGSNCILCSSH*TACPQC Trigger: GCATTGTGGACACGCCGTGCAATGAGATGAACACAG...AATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR GCA 90 bp | GGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGAACACAGCATGGAGGTTATCGATGGAGGGCAGCTTTaGCAACCCCATAGATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GIGSNCILGQAEHSMEVIDGGQL*QPHRFL Trigger: GAGGAATCTATGGGGTTGGCAAAGCTGCCCTCCATC...GATAACCTCCATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAACACCATAGACGATGCCCTTaGCCACCCAGGCAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQHVLDGRATGVKAFCKHHRRCP*PPRQWS Trigger: AGACCATTGCCTGGGTGGGCAAGGGCATCGTCTATG...GTGTTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCTAGGACTTCTCTGGTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAGTAAGACACCCCGTCTaGCAGCACCAGCCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPRTSLVGTVRFMFRVEEVRHPV*QHQPAL Trigger: GAGGGCAGGCTGGTGCTGGCAGACGGGGTGTCTTAC...TTCCTCAACTCTGAACATGAATCTCACAGTTCCTACCAGAGAAGTCCTAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCTCAGACAGGCTCTACACCTAGACAAAGAAGTAAGACAAAGAAGTTGTGCAGGTGTTGCAGCTaGCCCAACAGCAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPQTGSTPRQRSKTKKLCRCCS*PNSSRG Trigger: GCCCCTGCTGCTGTTGGGCCAGCTGCAACACCTGCA...CAACTTCTTTGTCTTACTTCTTTGTCTAGGTGTAGAGCCTGTCTGAGGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | CCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAACACGTGGTGGACACTTCCACTaGGCCATTGTCTTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PACLRWQGNRSKGLLQTRGGHFH*AIVLSH Trigger: GTGGGACAAGACAATGGCCCAGTGGAAGTGTCCACC...ACGTGTTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGTTAAACATTGCAAGGTaGACACTTCCACTGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVKPVPLAISGPGERARELNIAR*TLPLGH Trigger: ATGGCCCAGTGGAAGTGTCCACCTTGCAATGTTTAA...CTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | CTCACTCCTGTCACCACTGGGCACGGAAGGAGAAGCCAAACTCATCTTAAGAGTGTGAGCACGGCTGCATaGTACTTCCCTGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LTPVTTGHGRRSQTHLKSVSTAA*YFPVAM Trigger: CATTGCCACAGGGAAGTACCATGCAGCCGTGCTCAC...ACTCTTAAGATGAGTTTGGCTTCTCCTTCCGTGCCCAGTGGTGACAGGAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | GTTATCTTTGAAACCCTGCAGGACATTTCCTTGCCAGCATGTCTTAGATGGCAGGGTGATGAAGTGGGCTaGGGACGGGCTGTTATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VIFETLQDISLPACLRWQGDEVG*GRAVMP Trigger: CGGCATAACAGCCCGTCCGCAGCCCACTTCATCACC...CTGCCATCTAAGACATGCTGGCAAGGAAATGTCCTGCAGGGTTTCAAAGATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | GTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGGGAGCTGTGAGATCAGGATACACCGGTaGGTTCCAGGAGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAIFNSTSSELGVGGSCEIRIHR*VPGGRQ Trigger: CTGCCTGCCTCCTGGAACCCACCGGTGTATCCTGAT...CTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | AGCCTTACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGTTAAACATTGCAAGGTaGACACTTCCACTGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSPSTAGECHPAWWHWLNIAR*TLPLGH Trigger: ATGGCCCAGTGGAAGTGTCCACCTTGCAATGTTTAA...CCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTTACTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGTTCCTCCAAATCCTTTaGTCTTTAGCTGCTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSPSTAGECHPAWWHWFLQIL*SLAAHR Trigger: GCGATGAGCAGCTAAAGACCAAAGGATTTGGAGGAA...CCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGTAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAAGCAGAACACAGCATaGAGGTTATCTTTGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LWAVKPVPLAISGPGERAKQNTA*RLSLKP Trigger: GGGTTTCAAAGATAACCTCCATGCTGTGTTCTGCTT...CGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCTCAGACAGGCTCTACACCTAGACAAAGAAGTAAGACAAAGAAGTTGCCTAGAAGGCAGAGCTaGCACTGTGGCGCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPQTGSTPRQRSKTKKLPRRQS*HCGAVQ Trigger: CTGAACTGCGCCACAGTGGCAGCTCTGCCTTCTAGG...CAACTTCTTTGTCTTACTTCTTTGTCTAGGTGTAGAGCCTGTCTGAGGCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | GTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATGGTGATGAAGTGGGCTaGGGACGGGCTGTTATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGTVRFMFRVEESQVYPNGDEVG*GRAVMP Trigger: CGGCATAACAGCCCGTCCGCAGCCCACTTCATCACC...ATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | GGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATATGTGCCCACCCAGGCAATaGTCTGTGTGGCCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVRFMFRVEESQVYPNMCPPRQ*SVWPHQ Trigger: CTGATGGGGCCACACAGACCATTGCCTGGGTGGGCA...CATATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | GTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATCCGGCCTGGTGGCATTaGGTCCAACTGCATTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGTVRFMFRVEESQVYPNPAWWH*VQLHSR Trigger: CCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGG...ATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR TCA 90 bp | TGCCCTAGGACTTCTCTGGTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAACGATGTGTGAAGCAATaGAGAGGCCAGCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRTSLVGTVRFMFRVEERCVKQ*RGQHRS Trigger: GCTCCTGTGCTGGCCTCTTCATTGCTTCACACATCG...TTCCTCAACTCTGAACATGAATCTCACAGTTCCTACCAGAGAAGTCCTAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | CAAGGTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGCGGACGGGCTGTTATaGCGGCTCACCCTAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGYVVAIFNSTSSELGVGADGLL*RLTLEG Trigger: GCCTTCTAGGGTGAGCCGGCATAACAGCCCGTCCGC...ACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCACAACATAACCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | CAAGGTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGCGGTGTGTGAAGAGTaGGAAGGCCCGTGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGYVVAIFNSTSSELGVGAVCEE*EGPCQG Trigger: GCCTTGGCACGGGCCTTCCCACTCTTCACACACCGC...ACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCACAACATAACCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | TGCCCTAGGACTTCTCTGGTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAGGTGGACACTTCCACTaGGCCATTGTCTTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPRTSLVGTVRFMFRVEEGGHFH*AIVLSH Trigger: GTGGGACAAGACAATGGCCCAGTGGAAGTGTCCACC...TTCCTCAACTCTGAACATGAATCTCACAGTTCCTACCAGAGAAGTCCTAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | TGCCCTAGGACTTCTCTGGTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAATGTTGTCGCCTTCCTaGGCATCCACCTCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPRTSLVGTVRFMFRVEEMLSPS*ASTSQS Trigger: GGACTGTGAGGTGGATGCCCAGGAAGGCGACAACAT...TTCCTCAACTCTGAACATGAATCTCACAGTTCCTACCAGAGAAGTCCTAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | GTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATCGAGCCTCCGTCTCTTaGAGTCACGCCCCATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGTVRFMFRVEESQVYPNRASVS*SHAPCC Trigger: ACAACATGGGGCGTGACTCCAAGAGACGGAGGCTCG...ATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | GTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGGGAGCTGTGAGCTGTGTTCATCTCATTaGACGGCGTGTCCACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VAIFNSTSSELGVGGSCELCSSH*TACPQC Trigger: GCATTGTGGACACGCCGTGCAATGAGATGAACACAG...CTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| 3UTR CAA 72 bp | TGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTaGGTGGGAGCTGTGAGGGTCTCCTGCTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPYLIQLQVNWG*VGAVRVSCFTE Trigger: TTCTGTGAAGCAGGAGACCCTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | GTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATGATGGAGGGCAGCTTTaGCAACCCCATAGATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTVRFMFRVEESQVYPNDGGQL*QPHRFL Trigger: GAGGAATCTATGGGGTTGGCAAAGCTGCCCTCCATC...ATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR GCA 90 bp | AGTGAGCGGAGACAAGGTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAAACTTCCCTGTGGCAATaGCTTGTGCCCCTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SERRQGYVVAIFNSTSSETSLWQ*LVPLSG Trigger: CCCTGACAGGGGCACAAGGCATTGCCACAGGGAAGT...TTCACTTGAAGTTGAATTAAATATGGCCACAACATAACCTTGTCTCCGCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CCA 90 bp | ACATTTCCTTGCCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCAGCTCCTTTCCAACTTaGATAATCTCCTCAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFPCQHVLDGRATGVKAFSSFPT*IISSRK Trigger: CTTCCTTGAGGAGATTATCCAAGTTGGAAAGGAGCT...GAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCAAGGAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
||
| CDS-3UTR CCA 90 bp | GTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGGGAGCTGTGAGAGCTCCTTTCCAACTTaGATAATCTCCTCAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAIFNSTSSELGVGGSCESSFPT*IISSRK Trigger: CTTCCTTGAGGAGATTATCCAAGTTGGAAAGGAGCT...CTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS GCA 90 bp | TGCAGCTTCCCGCGGACGTGGCTCCAGGGCACGCGGTGCAGGTGTTaGAGCTGGCCCAACAGCAGCAGGGGCCGGCTCTGGGGGTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSFPRTWLQGTRCRC*SWPNSSRGRLWGSA Trigger: CGCGGACCCCCAGAGCCGGCCCCTGCTGCTGTTGGGCCAGCTGCAACACCTGCACCGCGTGCCCTGGAGCCACGTCCGCGGGAAGCTGCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS GCA 90 bp | AGCGTGGCCAGAGCTGCCTGCCAGAGCTCCTCGGTGACCCGGGGCTaGAGCTTCCCGCGGACGTGGCTCCAGGGCACGCGGTGCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVARAACQSSSVTRG*SFPRTWLQGTRCRC Trigger: ACACCTGCACCGCGTGCCCTGGAGCCACGTCCGCGGGAAGCTGCAGCCCCGGGTCACCGAGGAGCTCTGGCAGGCAGCTCTGGCCACGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS CCA 90 bp | TGCCAGAGCTCCTCGGTGACCCGGGGCTGCAGCTTCCCGCGGACGTaGCTCCAGGGCACGCGGTGCAGGTGTTGCAGCTGGCCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQSSSVTRGCSFPRT*LQGTRCRCCSWPNS Trigger: GCTGTTGGGCCAGCTGCAACACCTGCACCGCGTGCCCTGGAGCCACGTCCGCGGGAAGCTGCAGCCCCGGGTCACCGAGGAGCTCTGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS TCA 90 bp | TCCGGCCAGCCTTCACGCAGGCCGCCTCCCACTCGGCGCTGTTGGTaGGCACGGCTGCATGGTACTTCCCTGTGGCAATGCCTTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGQPSRRPPPTRRCW*ARLHGTSLWQCLVP Trigger: GGGCACAAGGCATTGCCACAGGGAAGTACCATGCAGCCGTGCTCACCAACAGCGCCGAGTGGGAGGCGGCCTGCGTGAAGGCTGGCCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS CCA 90 bp | ACGCAGGCCGCCTCCCACTCGGCGCTGTTGGTGAGCACGGCTGCATaGTACTTCCCTGTGGCAATGCCTTGTGCCCCTGTCAGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQAASHSALLVSTAA*YFPVAMPCAPVRVA Trigger: GGCCACCCTGACAGGGGCACAAGGCATTGCCACAGGGAAGTACCATGCAGCCGTGCTCACCAACAGCGCCGAGTGGGAGGCGGCCTGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS GCA 90 bp | CTTCACGCAGGCCGCCTCCCACTCGGCGCTGTTGGTGAGCACGGCTaGATGGTACTTCCCTGTGGCAATGCCTTGTGCCCCTGTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHAGRLPLGAVGEHG*MVLPCGNALCPCQG Trigger: ACCCTGACAGGGGCACAAGGCATTGCCACAGGGAAGTACCATGCAGCCGTGCTCACCAACAGCGCCGAGTGGGAGGCGGCCTGCGTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS-3UTR CAA 90 bp | ACATCTACCCAGGGCTGGCTAGACACCCCAGGGAGCCCCAGCTTGAGCAAGGGCGAGTCACGCCCCATGTaGTCGCCTTCCTGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTQGWLDTPGSPSLSKGESRPM*SPSWAS Trigger: GGATGCCCAGGAAGGCGACAACATGGGGCGTGACTC...GCCCTTGCTCAAGCTGGGGCTCCCTGGGGTGTCTAGCCAGCCCTGGGTAGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS TCA 90 bp | GGTGGACCCAGACCCCGGGCCAGTCAAACCCGATGTGTGAAGCAATaGAGAGGCCAGCACAGGAGCTGGGGCTGTTGTCTCGGTCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPRPRASQTRCVKQ*RGQHRSWGCCLGPP Trigger: TGGCGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTCTTCATTGCTTCACACATCGGGTTTGACTGGCCCGGGGTCTGGGTCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 90 bp | GGCTGCGGACGGGCTGTTATGCCGGCTCACCCTAGAAGGCAGAGCTaGCACTGTGGCGCAGTTCAGGTAGAGAGGACAGCTGTCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCGRAVMPAHPRRQS*HCGAVQVERTAVCG Trigger: CCCACAGACAGCTGTCCTCTCTACCTGAACTGCGCCACAGTGGCAGCTCTGCCTTCTAGGGTGAGCCGGCATAACAGCCCGTCCGCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 90 bp | CCTGTGGCTCGCTCGCCAGCATGCACTGGAGCAGCGATGTCCAGGTaGACCCAGACCCCGGGCCAGTCAAACCCGATGTGTGAAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PVARSPACTGAAMSR*TQTPGQSNPMCEAM Trigger: CATTGCTTCACACATCGGGTTTGACTGGCCCGGGGTCTGGGTCCACCTGGACATCGCTGCTCCAGTGCATGCTGGCGAGCGAGCCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 90 bp | GTTCTCACGAGCCTGGTGATGAAGTGGGCTGCGGACGGGCTGTTATaGCGGCTCACCCTAGAAGGCAGAGCTGCCACTGTGGCGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLTSLVMKWAADGLL*RLTLEGRAATVAQF Trigger: GAACTGCGCCACAGTGGCAGCTCTGCCTTCTAGGGTGAGCCGGCATAACAGCCCGTCCGCAGCCCACTTCATCACCAGGCTCGTGAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 90 bp | ACGAGCCTCCGTCTCTTGGAGTCACGCCCCATGTTGTCGCCTTCCTaGGCATCCACCTCACAGTCCAGCGGGGATACCAGGTTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSLRLLESRPMLSPS*ASTSQSSGDTRFSS Trigger: GCTGCTGAACCTGGTATCCCCGCTGGACTGTGAGGTGGATGCCCAGGAAGGCGACAACATGGGGCGTGACTCCAAGAGACGGAGGCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS TCA 90 bp | CTTCCACTGGGCCATTGTCTTGTCCCACCAGGAAGAACTCCACCATaGCTGTCCTCTTCTCTGCGCGCCGGGATGCCCCTGAGCGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLGHCLVPPGRTPP*LSSSLRAGMPLSGV Trigger: CACACCGCTCAGGGGCATCCCGGCGCGCAGAGAAGAGGACAGTCATGGTGGAGTTCTTCCTGGTGGGACAAGACAATGGCCCAGTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS-3UTR CAA 90 bp | ACATCTACCCAGGGCTGGCTAGACACCCCAGGGAGCCCCAGCTTGAGCAAGGGCACTTCCACTGGGCCATaGTCTTGTCCCACCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSTQGWLDTPGSPSLSKGTSTGP*SCPTRK Trigger: CTTCCTGGTGGGACAAGACAATGGCCCAGTGGAAGT...GCCCTTGCTCAAGCTGGGGCTCCCTGGGGTGTCTAGCCAGCCCTGGGTAGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 90 bp | TTTGAAACCCTGCTTGATGGCGGCTCTGAAGGCTCCCAGGACGGCTaGCGCACCCCCACAGTCTCGCTTCATCCCTGGCATAGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FETLLDGGSEGSQDG*RTPTVSLHPWHSGL Trigger: AAGACCACTATGCCAGGGATGAAGCGAGACTGTGGGGGTGCGGCAGCCGTCCTGGGAGCCTTCAGAGCCGCCATCAAGCAGGGTTTCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | GCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAGACGAGCCTCCGTCTCTaGGAGTCACGCCCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVKPVPLAISGPGERARETSLRL*ESRPML Trigger: CAACATGGGGCGTGACTCCAAGAGACGGAGGCTCGT...CTCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 90 bp | GATGATGTCAGCCCCCAGGTCTTTGCAAGCGTAAGACACCCCGTCTaGCAGCACCAGCCTGCCCTCAGCATCCGTGTTGTTGATCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: DDVSPQVFASVRHPV*QHQPALSIRVVDLY Trigger: GTAGAGATCAACAACACGGATGCTGAGGGCAGGCTGGTGCTGGCAGACGGGGTGTCTTACGCTTGCAAAGACCTGGGGGCTGACATCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 90 bp | TCTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTaGGTCCAACTGCATTCTCGGCCAAGCAGAACACAGCATGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSTAGECHPAWWH*VQLHSRPSRTQHGG Trigger: ACCTCCATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 90 bp | CTACGGTCTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTGGTaGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGAACACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRSSPSTAGECHPAW*HWVQLHSRPSRTQH Trigger: ATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGACCGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 90 bp | TCTCTACGGTCTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTaGTGGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRSSPSTAGECHPA*WHWVQLHSRPSRTQ Trigger: CTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGACCGTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | TGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAACACGTGCGCCCATGGCTGTTCACTGGGCCATTGTCTaGTCCCACCAGGAAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: WQGNRSKGLLQTRAPMAVHWAIV*SHQEEL Trigger: GAGTTCTTCCTGGTGGGACAAGACAATGGCCCAGTG...AACAGCCATGGGCGCACGTGTTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS-3UTR CAA 90 bp | GTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTCGGCCAAGCAACTTCCACTGGGCCATaGTCTTGTCCCACCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VNVIRPGGIGSNCILGQATSTGP*SCPTRK Trigger: CTTCCTGGTGGGACAAGACAATGGCCCAGTGGAAGT...TGCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS TCA 90 bp | GCATCCGTGTTGTTGATCTCTACGGTCTTCCCCGAGTACAGCAGGTaGATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASVLLISTVFPEYSR*MSSGLVALGPTAFS Trigger: CGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGACCGTAGAGATCAACAACACGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | AGGAGTAAAGGCCTTCTGCAAACACGTGCGCCCATGGCTGTTCCCTTCAGAGAAAAGCTCCACTTTCCTTaGATGCTGAGACCGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSKGLLQTRAPMAVPFREKLHFP*MLRPPV Trigger: CACCGGCGGTCTCAGCATCAAAGGAAAGTGGAGCTT...TTCTCTGAAGGGAACAGCCATGGGCGCACGTGTTTGCAGAAGGCCTTTACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS CCA 90 bp | GTGGCATTGGGTCCAACTGCATTCTCGGCCAAGCAGAACACAGCATaGAGGTTATCTTTGAAACCCTGCTTGATGGCGGCTCTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VALGPTAFSAKQNTA*RLSLKPCLMAALKA Trigger: AGCCTTCAGAGCCGCCATCAAGCAGGGTTTCAAAGATAACCTCCATGCTGTGTTCTGCTTGGCCGAGAATGCAGTTGGACCCAATGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | GTAGGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATTCTGTGGGGTTGGGGTaGAGCGTGGCCAGAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGTVRFMFRVEESQVYPNSVGLG*SVARAA Trigger: GGCAGCTCTGGCCACGCTCAACCCCAACCCCACAGA...ATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGCAGCTCCTTTCCAACTaGGATAATCTCCTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LWAVKPVPLAISGPGERAQLLSN*DNLLKE Trigger: TTCCTTGAGGAGATTATCCAAGTTGGAAAGGAGCTG...CGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | GTGGCTCTAAAGACCAGGGTGGAGGACAAGGGACAGAGCTTACAGATGGAGACCGCATGGAGGTTATCTTaGAAACCCTGCTTGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VALKTRVEDKGQSLQMETAWRLS*KPCLMA Trigger: CGCCATCAAGCAGGGTTTCAAAGATAACCTCCATGC...GGTCTCCATCTGTAAGCTCTGTCCCTTGTCCTCCACCCTGGTCTTTAGAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 90 bp | ATGCGAGCTGCTAGTCGGACACCTTCTGTAGCATTGGTTAAACATTaGAAGGTGGACACTTCCACTGGGCCATTGTCTTGTCCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MRAASRTPSVALVKH*KVDTSTGPLSCPTR Trigger: CCTGGTGGGACAAGACAATGGCCCAGTGGAAGTGTCCACCTTGCAATGTTTAACCAATGCTACAGAAGGTGTCCGACTAGCAGCTCGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS-3UTR CAA 90 bp | GGCTGTAAAACCAGTTCCACTAGCCATCTCAGGCCCAGGAGAGCGAGCGAGGGAACACCTTCTGTAGCATaGGTTAAACATTGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GCKTSSTSHLRPRRASEGTPSVA*VKHCKV Trigger: CACCTTGCAATGTTTAACCAATGCTACAGAAGGTGT...TCCCTCGCTCGCTCTCCTGGGCCTGAGATGGCTAGTGGAACTGGTTTTACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | GTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTGGGAGCTGTGAGCACTGGGCCATTGTCTaGTCCCACCAGGAAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VAIFNSTSSELGVGGSCEHWAIV*SHQEEL Trigger: GAGTTCTTCCTGGTGGGACAAGACAATGGCCCAGTG...CTCACAGCTCCCACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGTGAATGTCATCCGGCCTGGTGGCATTGGGTCCAACTGCATTCTCGGACACCTTCTGTAGCATaGGTTAAACATTGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAGECHPAWWHWVQLHSRTPSVA*VKHCKV Trigger: CACCTTGCAATGTTTAACCAATGCTACAGAAGGTGT...CCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS-3UTR CAA 90 bp | CAAGGTTATGTTGTGGCCATATTTAATTCAACTTCAAGTGAACTGGGGGTTGGTTCCCACTCGGCGCTGTaGGTGAGCACGGCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: QGYVVAIFNSTSSELGVGSHSAL*VSTAAW Trigger: CCATGCAGCCGTGCTCACCAACAGCGCCGAGTGGGA...ACCAACCCCCAGTTCACTTGAAGTTGAATTAAATATGGCCACAACATAACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | TGCAGGACATTTCCTTGCCAGCATGTCTTAGATGGCAGGGCAACAGGAGTAAAGTCTGTGTTCATCTCATaGCACGGCGTGTCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: CRTFPCQHVLDGRATGVKSVFIS*HGVSTM Trigger: CATTGTGGACACGCCGTGCAATGAGATGAACACAGA...CTTTACTCCTGTTGCCCTGCCATCTAAGACATGCTGGCAAGGAAATGTCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS-3UTR CAA 90 bp | CATGTCTTAGATGGCAGGGCAACAGGAGTAAAGGCCTTCTGCAAACACGTGCGCCAGCTCCTTTCCAACTaGGATAATCTCCTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HVLDGRATGVKAFCKHVRQLLSN*DNLLKE Trigger: TTCCTTGAGGAGATTATCCAAGTTGGAAAGGAGCTG...GCGCACGTGTTTGCAGAAGGCCTTTACTCCTGTTGCCCTGCCATCTAAGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125502.3 |
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| CDS-3UTR CAA 90 bp | CCTCAGCCTCAGACAGGCTCTACACCTAGACAAAGAAGTAAGACAAAGAAGTTGTCTTTGAAACCCTGCTaGATGGCGGCTCTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQPQTGSTPRQRSKTKKLSLKPC*MAALKA Trigger: AGCCTTCAGAGCCGCCATCAAGCAGGGTTTCAAAGA...CAACTTCTTTGTCTTACTTCTTTGTCTAGGTGTAGAGCCTGTCTGAGGCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS-3UTR CAA 90 bp | GGAACTGTGAGATTCATGTTCAGAGTTGAGGAAAGCCAAGTCTACCCCAATATGTCTGTGTTCATCTCATaGCACGGCGTGTCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GTVRFMFRVEESQVYPNMSVFIS*HGVSTM Trigger: CATTGTGGACACGCCGTGCAATGAGATGAACACAGA...CATATTGGGGTAGACTTGGCTTTCCTCAACTCTGAACATGAATCTCACAGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 72 bp | CCGCGGACGTGGCTCCAGGGCACGCGGTGCAGGTGTTaGAGCTGGCCCAACAGCAGCAGGGGCCGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRTWLQGTRCRC*SWPNSSRGRLW Trigger: CCAGAGCCGGCCCCTGCTGCTGTTGGGCCAGCTGCAACACCTGCACCGCGTGCCCTGGAGCCACGTCCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CAA 90 bp | CTGCAGCTTCCCGCGGACGTGGCTCCAGGGCACGCGGTGCAGGTGTaGCAGCTGGCCCAACAGCAGCAGGGGCCGGCTCTGGGGGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LQLPADVAPGHAVQV*QLAQQQQGPALGVR Trigger: GCGGACCCCCAGAGCCGGCCCCTGCTGCTGTTGGGCCAGCTGCAACACCTGCACCGCGTGCCCTGGAGCCACGTCCGCGGGAAGCTGCAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 72 bp | ACGTGGCTCCAGGGCACGCGGTGCAGGTGTTGCAGCTaGCCCAACAGCAGCAGGGGCCGGCTCTGGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TWLQGTRCRCCS*PNSSRGRLWGS Trigger: GGACCCCCAGAGCCGGCCCCTGCTGCTGTTGGGCCAGCTGCAACACCTGCACCGCGTGCCCTGGAGCCACGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 72 bp | TCCTCGGTGACCCGGGGCTGCAGCTTCCCGCGGACGTaGCTCCAGGGCACGCGGTGCAGGTGTTGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSVTRGCSFPRT*LQGTRCRCCSW Trigger: CCAGCTGCAACACCTGCACCGCGTGCCCTGGAGCCACGTCCGCGGGAAGCTGCAGCCCCGGGTCACCGAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 72 bp | CACCCCAAAGCCTGTGGCTCGCTCGCCAGCATGCACTaGAGCAGCGATGTCCAGGTGGACCCAGACCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HPKACGSLASMH*SSDVQVDPDPG Trigger: CCCGGGGTCTGGGTCCACCTGGACATCGCTGCTCCAGTGCATGCTGGCGAGCGAGCCACAGGCTTTGGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 72 bp | GGCCGCCTCCCACTCGGCGCTGTTGGTGAGCACGGCTaGATGGTACTTCCCTGTGGCAATGCCTTGTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRLPLGAVGEHG*MVLPCGNALCP Trigger: GGGGCACAAGGCATTGCCACAGGGAAGTACCATGCAGCCGTGCTCACCAACAGCGCCGAGTGGGAGGCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS TCA 72 bp | CCTTCACGCAGGCCGCCTCCCACTCGGCGCTGTTGGTaGGCACGGCTGCATGGTACTTCCCTGTGGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: PSRRPPPTRRCW*ARLHGTSLWQC Trigger: GCATTGCCACAGGGAAGTACCATGCAGCCGTGCTCACCAACAGCGCCGAGTGGGAGGCGGCCTGCGTGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 72 bp | CTGCTTGATGGCGGCTCTGAAGGCTCCCAGGACGGCTaGCGCACCCCCACAGTCTCGCTTCATCCCTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLDGGSEGSQDG*RTPTVSLHPWH Trigger: ATGCCAGGGATGAAGCGAGACTGTGGGGGTGCGGCAGCCGTCCTGGGAGCCTTCAGAGCCGCCATCAAGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 72 bp | GGAGGCAGGCAGGTTCTCACGAGCCTGGTGATGAAGTaGGCTGCGGACGGGCTGTTATGCCGGCTCACCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GGRQVLTSLVMK*AADGLLCRLTL Trigger: TAGGGTGAGCCGGCATAACAGCCCGTCCGCAGCCCACTTCATCACCAGGCTCGTGAGAACCTGCCTGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS GCA 72 bp | AGCCTGGTGATGAAGTGGGCTGCGGACGGGCTGTTATaGCGGCTCACCCTAGAAGGCAGAGCTGCCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLVMKWAADGLL*RLTLEGRAATV Trigger: CACAGTGGCAGCTCTGCCTTCTAGGGTGAGCCGGCATAACAGCCCGTCCGCAGCCCACTTCATCACCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS GCA 72 bp | CAGGCAGGTTCTCACGAGCCTGGTGATGAAGTGGGCTaGGGACGGGCTGTTATGCCGGCTCACCCTAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QAGSHEPGDEVG*GRAVMPAHPRR Trigger: CCTTCTAGGGTGAGCCGGCATAACAGCCCGTCCGCAGCCCACTTCATCACCAGGCTCGTGAGAACCTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
||
| CDS CCA 72 bp | CGTCTCTTGGAGTCACGCCCCATGTTGTCGCCTTCCTaGGCATCCACCTCACAGTCCAGCGGGGATACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLESRPMLSPS*ASTSQSSGDTR Trigger: CCTGGTATCCCCGCTGGACTGTGAGGTGGATGCCCAGGAAGGCGACAACATGGGGCGTGACTCCAAGAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CAA 72 bp | CACACGAGCCTCCGTCTCTTGGAGTCACGCCCCATGTaGTCGCCTTCCTGGGCATCCACCTCACAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HTSLRLLESRPM*SPSWASTSQSS Trigger: GCTGGACTGTGAGGTGGATGCCCAGGAAGGCGACAACATGGGGCGTGACTCCAAGAGACGGAGGCTCGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS TCA 72 bp | GGCCATTGTCTTGTCCCACCAGGAAGAACTCCACCATaGCTGTCCTCTTCTCTGCGCGCCGGGATGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GHCLVPPGRTPP*LSSSLRAGMPL Trigger: CAGGGGCATCCCGGCGCGCAGAGAAGAGGACAGTCATGGTGGAGTTCTTCCTGGTGGGACAAGACAATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
||
| CDS GCA 72 bp | AGCCCCCAGGTCTTTGCAAGCGTAAGACACCCCGTCTaGCAGCACCAGCCTGCCCTCAGCATCCGTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPQVFASVRHPV*QHQPALSIRVV Trigger: AACAACACGGATGCTGAGGGCAGGCTGGTGCTGGCAGACGGGGTGTCTTACGCTTGCAAAGACCTGGGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS CCA 72 bp | GACGGCTGCCGCACCCCCACAGTCTCGCTTCATCCCTaGCATAGTGGTCTTTCCTTTGATGCTGAGACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: DGCRTPTVSLHP*HSGLSFDAETA Trigger: GGCGGTCTCAGCATCAAAGGAAAGACCACTATGCCAGGGATGAAGCGAGACTGTGGGGGTGCGGCAGCCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS TCA 72 bp | AGACCCCGGGCCAGTCAAACCCGATGTGTGAAGCAATaGAGAGGCCAGCACAGGAGCTGGGGCTGTTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPRASQTRCVKQ*RGQHRSWGCCL Trigger: GAGACAACAGCCCCAGCTCCTGTGCTGGCCTCTTCATTGCTTCACACATCGGGTTTGACTGGCCCGGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
||
| CDS CCA 72 bp | ACCTCAGTCTGTTCGCAGACCATCAGGATACACCGGTaGGTTCCAGGAGGCAGGCAGGTTCTCACGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TSVCSQTIRIHR*VPGGRQVLTSL Trigger: CAGGCTCGTGAGAACCTGCCTGCCTCCTGGAACCCACCGGTGTATCCTGATGGTCTGCGAACAGACTGAGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS CCA 72 bp | CAAAAAGAGCCAGTAGGAGAGCCACCCCAAAGCCTGTaGCTCGCTCGCCAGCATGCACTGGAGCAGCGATGT | + |
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Preference number: 6 (lower is better) Translates to: QKEPVGEPPQSL*LARQHALEQRC Trigger: ACATCGCTGCTCCAGTGCATGCTGGCGAGCGAGCCACAGGCTTTGGGGTGGCTCTCCTACTGGCTCTTTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CAA 72 bp | GAAGCAATGAAGAGGCCAGCACAGGAGCTGGGGCTGTaGTCTCGGTCCGCCACGGAGTTCTTCATGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: EAMKRPAQELGL*SRSATEFFMSA Trigger: GGCTGACATGAAGAACTCCGTGGCGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTCTTCATTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS TCA 72 bp | CTGCCAGCACCAGCCTGCCCTCAGCATCCGTGTTGTTaGTCTCTACGGTCTTCCCCGAGTACAGCAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LPAPACPQHPCC*SLRSSPSTAGE Trigger: TTCACCTGCTGTACTCGGGGAAGACCGTAGAGATCAACAACACGGATGCTGAGGGCAGGCTGGTGCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS TCA 72 bp | TGCCTTGTGCCCCTGTCAGGGTGGCCATGTCCACGATaGTGTCAGCCCCCAGGTCTTTGCAAGCGTAAGACA | + |
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Preference number: 6 (lower is better) Translates to: CLVPLSGWPCPR*CQPPGLCKRKT Trigger: TGTCTTACGCTTGCAAAGACCTGGGGGCTGACATCATCGTGGACATGGCCACCCTGACAGGGGCACAAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CCA 72 bp | TCTTCCCCGAGTACAGCAGGTGAATGTCATCCGGCCTaGTGGCATTGGGTCCAACTGCATTCTCGGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSPSTAGECHPA*WHWVQLHSRPS Trigger: GCTTGGCCGAGAATGCAGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS TCA 72 bp | TTGTTGATCTCTACGGTCTTCCCCGAGTACAGCAGGTaGATGTCATCCGGCCTGGTGGCATTGGGTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: LLISTVFPEYSR*MSSGLVALGPT Trigger: AGTTGGACCCAATGCCACCAGGCCGGATGACATTCACCTGCTGTACTCGGGGAAGACCGTAGAGATCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044415.16 |
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| CDS CAA 72 bp | ACATTGCAAGGTGGACACTTCCACTGGGCCATTGTCTaGTCCCACCAGGAAGAACTCCACCATGACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TLQGGHFHWAIV*SHQEELHHDCP Trigger: AGGACAGTCATGGTGGAGTTCTTCCTGGTGGGACAAGACAATGGCCCAGTGGAAGTGTCCACCTTGCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS CAA 90 bp | GTAGCATTGGTTAAACATTGCAAGGTGGACACTTCCACTGGGCCATaGTCTTGTCCCACCAGGAAGAACTCCACCATGACTGTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VALVKHCKVDTSTGP*SCPTRKNSTMTVLF Trigger: GAAGAGGACAGTCATGGTGGAGTTCTTCCTGGTGGGACAAGACAATGGCCCAGTGGAAGTGTCCACCTTGCAATGTTTAACCAATGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS CAA 72 bp | GTTAAACATTGCAAGGTGGACACTTCCACTGGGCCATaGTCTTGTCCCACCAGGAAGAACTCCACCATGACT | + |
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Preference number: 6 (lower is better) Translates to: VKHCKVDTSTGP*SCPTRKNSTMT Trigger: AGTCATGGTGGAGTTCTTCCTGGTGGGACAAGACAATGGCCCAGTGGAAGTGTCCACCTTGCAATGTTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS CAA 72 bp | ATAATCTCCTCAAGGAAGATGTCTGTGTTCATCTCATaGCACGGCGTGTCCACAATGCGAGCTGCTAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: IISSRKMSVFIS*HGVSTMRAASR Trigger: CCGACTAGCAGCTCGCATTGTGGACACGCCGTGCAATGAGATGAACACAGACATCTTCCTTGAGGAGATTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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| CDS CAA 72 bp | GATGATGGTGGGGGTGATACCCAGCTCCTTTCCAACTaGGATAATCTCCTCAAGGAAGATGTCTGTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: DDGGGDTQLLSN*DNLLKEDVCVH Trigger: ATGAACACAGACATCTTCCTTGAGGAGATTATCCAAGTTGGAAAGGAGCTGGGTATCACCCCCACCATCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044415.16 ENSMUST00000125502.3 |
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