Pregenerated sensors for NPDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015094Ensembl transcript IDs: ENSMUST00000055921.14, ENSMUST00000071442.12, ENSMUST00000133409.2, ENSMUST00000141567.8, ENSMUST00000154809.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGACTTGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTaGAAGCAGATGCTAGATCTCCCACATAAGGCGGAGAATCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: WTWISSLRVHTRQRM*KQMLDLPHKAENLP Trigger: AGGGAGATTCTCCGCCTTATGTGGGAGATCTAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCAAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGCCCACTGGTGGGCTGTaGGCTGCAGGCATGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRPTGGL*AAGMWA Trigger: GGCCCACATGCCTGCAGCCCACAGCCCACCAGTGGG...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGCTCGTCCCCACTGGTaGGCTGTGGGCTGCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRARPHW*AVGCRH Trigger: ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGC...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGTGCTGCTCTTTTCCATaGGGAACACCAGGACTCGCT | + |
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Preference number: 2 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGCCSFP*GTPGLA Trigger: AGCGAGTCCTGGTGTTCCCCATGGAAAAGAGCAGCA...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAGTGGCGCCTCCCTCCTaGCAAAAGCATGCGGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: WISSLRVHTRQRMCKQMLVAPPS*QKHAGV Trigger: GACCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCAC...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR CAA 90 bp | TCTCCAAAACTCTCTATCCATGCCTGGGCTCTAGGGTTCCTGGACTaGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SPKLSIHAWALGFLD*DLQFEGSYQTENVQ Trigger: TTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCAAGTCCAGGAACCCTAGAGCCCAGGCATGGATAGAGAGTTTTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR CCA 72 bp | TTTCCATGGGGAACACCAGGACTCGCTCGTCCCCACTaGTGGGCTGTGGGCTGCAGGCATGTGGGCCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: FPWGTPGLARPH*WAVGCRHVGLG Trigger: TCCTAGGCCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCATGGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| 3UTR GCA 72 bp | ATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTaGAAGCAGATGCTAGATCTCCCACATAAGGCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ISSLRVHTRQRM*KQMLDLPHKAE Trigger: CTCCGCCTTATGTGGGAGATCTAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGGGGCCGCTCCCAGGATaGGGCCGGAGAGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGGPLPG*GRRAAA Trigger: GGCTGCTGCTCTCCGGCCTCATCCTGGGAGCGGCCC...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
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| CDS-3UTR GCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATCGTAGCAGCCGCAGGTaGCGCGGGGAAGGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHRSSRR*RGEGGG Trigger: CCCTCCGCCTTCCCCGCGGCACCTGCGGCTGCTACG...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
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| CDS-3UTR GCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGCGTAGCAGCCGCAGGTaGCGCGGGGAAGGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGRSSRR*RGEGGG Trigger: CCCTCCGCCTTCCCCGCGGCACCTGCGGCTGCTACG...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
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| CDS-3UTR TCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGCTGTGTGCCAGCCGCTaGTCCCCAGGCGAGATTCGT | + |
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Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGLCASR*SPGEIR Trigger: ACGAATCTCGCCTGGGGATCAGCGGCTGGCACACAG...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGTTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATC | + |
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Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGFPCLP*GSSGDI Trigger: GATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAA...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGCTCCATCTCCCCTGTTaGCGCCAGGCCTGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGLHLPC*RQAWAF Trigger: GAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAG...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGTGAAGAGGTTCCATaGGTAGAGGGGAGCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRGEEVP*VEGSPG Trigger: GCCCGGGCTCCCCTCTACTCATGGAACCTCTTCACC...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGAGGCGGATCTCTCGCTaGAGCCTACACCAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGRRISR*SLHQQR Trigger: CCTCTGCTGGTGTAGGCTTCAGCGAGAGATCCGCCT...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGCGGTCAGCCTTGAGTaGCCCGCCTCCTTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRAVSLE*PASFSF Trigger: GAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGC...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGTGAGGCCATTCCCATaGCTTCCCTGGGGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRVRPFP*LPWGSS Trigger: GCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCAC...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGCATCTCAGCACTGTGTaGCAGCCGCTGATCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGHLSTV*QPLIPR Trigger: CCTGGGGATCAGCGGCTGGCACACAGTGCTGAGATG...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGTCTCCTCTTCCAGTCTaGGCTGGGGCAGGCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGSPLPV*AGAGPP Trigger: GGGAGGGCCTGCCCCAGCCCAGACTGGAAGAGGAGA...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATTCTCCTCTTCCAGTCTaGGCTGGGGCAGGCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHSPLPV*AGAGPP Trigger: GGGAGGGCCTGCCCCAGCCCAGACTGGAAGAGGAGA...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATC | + |
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Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRFPCLP*GSSGDI Trigger: GATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGGTGAAGAGGTTCCATaGGTAGAGGGGAGCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHGEEVP*VEGSPG Trigger: GCCCGGGCTCCCCTCTACTCATGGAACCTCTTCACC...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCACTGTGTGCCAGCCGCTaGTCCCCAGGCGAGATTCGT | + |
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Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQALCASR*SPGEIR Trigger: ACGAATCTCGCCTGGGGATCAGCGGCTGGCACACAG...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTGGAGGAGCCAAGGGTaGGGCCATTCCCATGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRWRSQG*GHSHAF Trigger: GAAGGCATGGGAATGGCCTCACCCTTGGCTCCTCCA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGGCGGTCAGCCTTGAGTaGCCCGCCTCCTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGAVSLE*PASFSF Trigger: GAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGC...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGCGGTCAGCCTTGAGTaGCCCGCCTCCTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHAVSLE*PASFSF Trigger: GAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGC...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGGAATCCCAGGGTAGCTaGAGGCTCCAGGAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGESQGS*RLQELL Trigger: CAGAAGCTCCTGGAGCCTGCAGCTACCCTGGGATTC...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAGTGAGGCCATTCCCATaGCTTCCCTGGGGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAVRPFP*LPWGSS Trigger: GCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCAC...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGAGGCCATTCCCATaGCTTCCCTGGGGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHVRPFP*LPWGSS Trigger: GCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCAC...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGCATCTCAGCACTGTGTaGCAGCCGCTGATCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRHLSTV*QPLIPR Trigger: CCTGGGGATCAGCGGCTGGCACACAGTGCTGAGATG...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGGAAGGACTGAAGGCATaGTCCACAGGCATGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGEGLKA*STGMCP Trigger: GGGGCACATGCCTGTGGACCATGCCTTCAGTCCTTC...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
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| CDS-3UTR CCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGCTCCATCTCCCCTGTTaGCGCCAGGCCTGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGLHLPC*RQAWAF Trigger: GAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAG...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATCTCCATCTCCCCTGTTaGCGCCAGGCCTGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHLHLPC*RQAWAF Trigger: GAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAG...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAAGCGGCGGCAAGGAATaGGGACCAGGCACTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQASGGKE*GPGTGA Trigger: AGCACCAGTGCCTGGTCCCCATTCCTTGCCGCCGCT...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGATCAGCACAAGGGTaGGGCCATTCCCATGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRGSAQG*GHSHAF Trigger: GAAGGCATGGGAATGGCCTCACCCTTGTGCTGATCC...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
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| CDS-3UTR TCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAAGGCGGATCTCTCGCTaGAGCCTACACCAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQARRISR*SLHQQR Trigger: CCTCTGCTGGTGTAGGCTTCAGCGAGAGATCCGCCT...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGCTCCTTCTCCTTCAGTaGCAGTTCCTGGGCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGLLLLQ*QFLGQR Trigger: TCTCTGGCCCAGGAACTGGCACTGAAGGAGAAGGAG...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCACATCTCAGCACTGTGTaGCAGCCGCTGATCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAHLSTV*QPLIPR Trigger: CCTGGGGATCAGCGGCTGGCACACAGTGCTGAGATG...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTTCAGTGCCAGTTCCTaGAGCAAGCAGCCTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRFSASS*SKQPPE Trigger: CTCCGGAGGCTGCTTGCTGCAGGAACTGGCACTGAA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055921.14 |
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| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGGCTGACAGCGTGGAATaGTCAAACAGTGGGTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGADSVE*SNSGLR Trigger: GCGCAACCCACTGTTTGACCATTCCACGCTGTCAGC...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAGGATCAGCACAAGGGTaGGGCCATTCCCATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAGSAQG*GHSHAF Trigger: GAAGGCATGGGAATGGCCTCACCCTTGTGCTGATCC...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
||
| CDS-3UTR GCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATTGCCCGCCTCTTCAGTaGACAATCCAGGCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHCPPLQ*TIQASR Trigger: CCTGGAAGCCTGGATTGTGCACTGAAGAGGCGGGCA...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
||
| CDS-3UTR GCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGCCCGCCTCTTCAGTaGACAATCCAGGCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQACPPLQ*TIQASR Trigger: CCTGGAAGCCTGGATTGTGCACTGAAGAGGCGGGCA...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
||
| CDS-3UTR GCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAGAATCCCAGGGTAGCTaGAGGCTCCAGGAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAESQGS*RLQELL Trigger: CAGAAGCTCCTGGAGCCTGCAGCTACCCTGGGATTC...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR GCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGGAATCCCAGGGTAGCTaGAGGCTCCAGGAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGESQGS*RLQELL Trigger: CAGAAGCTCCTGGAGCCTGCAGCTACCCTGGGATTC...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGAAGGACTGAAGGCATaGTCCACAGGCATGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHEGLKA*STGMCP Trigger: GGGGCACATGCCTGTGGACCATGCCTTCAGTCCTTC...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGTGTTGGCGCCAGGCCTaGGCATTCATACACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGCWRQA*AFIHSE Trigger: TTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACA...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGGGAATGGTCAAACAGTaGGTTGCGCACCTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGGMVKQ*VAHLHL Trigger: GAGATGGAGGTGCGCAACCCACTGTTTGACCATTCC...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGCCAGGATCAGCACTGTaGGAGAAAGGGGCAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGPGSAL*EKGAIW Trigger: CCATATTGCCCCTTTCTCCCACAGTGCTGATCCTGG...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000133409.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTTTGGAGGTTCCTTATaGCGCTCCAGGCACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRFGGSL*RSRHSI Trigger: GATGCTGTGCCTGGAGCGGCATAAGGAACCTCCAAA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTTCAGTGCCAGTTCCTaGGCCAGAGAATCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRFSASS*ARESIS Trigger: GGAGATCGATTCTCTGGCCCAGGAACTGGCACTGAA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTGTTGGCGCCAGGCCTaGGCATTCATACACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRCWRQA*AFIHSE Trigger: TTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAGCTGACAGCGTGGAATaGTCAAACAGTGGGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAADSVE*SNSGLR Trigger: GCGCAACCCACTGTTTGACCATTCCACGCTGTCAGC...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATTTTGGAGGTTCCTTATaGCGCTCCAGGCACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHFGGSL*RSRHSI Trigger: GATGCTGTGCCTGGAGCGGCATAAGGAACCTCCAAA...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGGGAATGGTCAAACAGTaGGTTGCGCACCTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTRTRSSPLVGCGLQACGGMVKQ*VAHLHL Trigger: GAGATGGAGGTGCGCAACCCACTGTTTGACCATTCC...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAGGAATGGTCAAACAGTaGGTTGCGCACCTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAGMVKQ*VAHLHL Trigger: GAGATGGAGGTGCGCAACCCACTGTTTGACCATTCC...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGAGTATGGGGTATAGGTaGAGAGGTTCCATGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRSMGYR*RGSMSR Trigger: TCTACTCATGGAACCTCTTCACCTATACCCCATACT...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATTCTTGGTTTCCATGGTaGCAACTGAGGGATCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHSWFPW*QLRDQK Trigger: CTTCTGATCCCTCAGTTGTCACCATGGAAACCAAGA...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055921.14 |
||
| CDS-3UTR TCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAGGGCCGCTCCCAGGATaGGGCCGGAGAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLGPLPG*GRRAAA Trigger: GGCTGCTGCTCTCCGGCCTCATCCTGGGAGCGGCCC...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 |
||
| CDS-3UTR TCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATAGTATGGGGTATAGGTaGAGAGGTTCCATGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHSMGYR*RGSMSR Trigger: TCTACTCATGGAACCTCTTCACCTATACCCCATACT...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGAACTCAAGGAAGTATaGGGTATAGGTGAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRELKEV*GIGEEV Trigger: AACCTCTTCACCTATACCCCATACTTCCTTGAGTTC...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAGAACTCAAGGAAGTATaGGGTATAGGTGAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAELKEV*GIGEEV Trigger: AACCTCTTCACCTATACCCCATACTTCCTTGAGTTC...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGAACTCAAGGAAGTATaGGGTATAGGTGAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WGTPGLARPHWWAVGCRHELKEV*GIGEEV Trigger: AACCTCTTCACCTATACCCCATACTTCCTTGAGTTC...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAGGTGAAGAGGTTCCATaGGTAGAGGGGAGCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLGEEVP*VEGSPG Trigger: GCCCGGGCTCCCCTCTACTCATGGAACCTCTTCACC...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR TCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTACTGTGTGCCAGCCGCTaGTCCCCAGGCGAGATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLLCASR*SPGEIR Trigger: ACGAATCTCGCCTGGGGATCAGCGGCTGGCACACAG...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTATTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLFPCLP*GSSGDI Trigger: GATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAA...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAAGCGGCGGCAAGGAATaGGGACCAGGCACTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLSGGKE*GPGTGA Trigger: AGCACCAGTGCCTGGTCCCCATTCCTTGCCGCCGCT...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAGCTGACAGCGTGGAATaGTCAAACAGTGGGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLADSVE*SNSGLR Trigger: GCGCAACCCACTGTTTGACCATTCCACGCTGTCAGC...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTATGTTGGCGCCAGGCCTaGGCATTCATACACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLCWRQA*AFIHSE Trigger: TTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACA...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAAGTATGGGGTATAGGTaGAGAGGTTCCATGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WISSLRVHTRQRMCKQMLSMGYR*RGSMSR Trigger: TCTACTCATGGAACCTCTTCACCTATACCCCATACT...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS TCA 90 bp | CATCCGGGCGGCGGGCGGTGGCACCATTCAGGGCCGCTCCCAGGATaGGGCCGGAGAGCAGCAGCCGTAGCAGCCGCAGGTGCCGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPGGGRWHHSGPLPG*GRRAAAVAAAGAAG Trigger: CCCCGCGGCACCTGCGGCTGCTACGGCTGCTGCTCTCCGGCCTCATCCTGGGAGCGGCCCTGAATGGTGCCACCGCCCGCCGCCCGGATG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGCCTCCATCTCCCCTGTaGGCGCCAGGCCTGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRPPSPL*APGLGI Trigger: AATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGG...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGCTGTGCGGTCAGCCTaGAGTGCCCCGCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WGTPGLARPHWWAVGCRHAVRSA*SAPPPS Trigger: AGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGC...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGGGGCCAGGGCGGCTGAGCTaGCTAAGCAGAAAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGKGVQGWRLPPAKSMRGPGRLS*LSRKPG Trigger: TCCTGGCTTTCTGCTTAGCAAGCTCAGCCGCCCTGG...CCCCCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CAA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGCCTCCATCTCCCCTGTaGGCGCCAGGCCTGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: NTRTRSSPLVGCGLQACGPPSPL*APGLGI Trigger: AATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGG...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATCCTCCATCTCCCCTGTaGGCGCCAGGCCTGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: WGTPGLARPHWWAVGCRHPPSPL*APGLGI Trigger: AATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGG...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS TCA 90 bp | CAGGAGCTTCTGCGCAGCCTCAAGCAAGGGCTGTGCGGTCAGCCTTaGGTGCCCCGCCTCCTTCTCCTTCAGTGCCAGTTCCTGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QELLRSLKQGLCGQP*VPRLLLLQCQFLGQ Trigger: CTGGCCCAGGAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGCCCTTGCTTGAGGCTGCGCAGAAGCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 ENSMUST00000141567.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATCCAGGGCGGCTGAGCTaGCTAAGCAGAAAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WGTPGLARPHWWAVGCRHPGRLS*LSRKPG Trigger: TCCTGGCTTTCTGCTTAGCAAGCTCAGCCGCCCTGG...ATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCTGGCAAGGGAGTCCAGGGGTGGCGCCTCCCTCCTGCCAAAAGCATGCGGTGGTCAAACAGTGGGTaGCGCACCTCCATCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGKGVQGWRLPPAKSMRWSNSG*RTSISP Trigger: AGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCA...CCGCATGCTTTTGGCAGGAGGGAGGCGCCACCCCTGGACTCCCTTGCCAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS GCA 90 bp | TCCACAGGCATGTGCCCCTGGTGGGCATTTTGCCCGCCTCTTCAGTaGACAATCCAGGCTTCCAGGACAGGTGGTAGCATCCGGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: STGMCPWWAFCPPLQ*TIQASRTGGSIRAA Trigger: CGCCGCCCGGATGCTACCACCTGTCCTGGAAGCCTGGATTGTGCACTGAAGAGGCGGGCAAAATGCCCACCAGGGGCACATGCCTGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
||
| CDS CCA 90 bp | GGCGGCAAGGAATGGGGACCAGGCACTGGTGCTGACAGCGTGGAATaGTCAAACAGTGGGTTGCGCACCTCCATCTCCCCTGTTGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGKEWGPGTGADSVE*SNSGLRTSISPVGA Trigger: GGCGCCAACAGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACGCTGTCAGCACCAGTGCCTGGTCCCCATTCCTTGCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS CCA 90 bp | GGCAATATGGAGGAGCCAAGGGTGAGGCCATTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATCTGCACAGGTCCAGAGGATGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GNMEEPRVRPFPCLP*GSSGDICTGPEDAR Trigger: CCGAGCATCCTCTGGACCTGTGCAGATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCACCCTTGGCTCCTCCATATTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133409.2 |
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| CDS TCA 90 bp | GGGCGGCTGAGCTTGCTAAGCAGAAAGCCAGGATCAGCACAAGGGTaGGGCCATTCCCATGCCTTCCCTGGGGCTCCAGCGGGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLSLLSRKPGSAQG*GHSHAFPGAPAGTS Trigger: AGATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCACCCTTGTGCTGATCCTGGCTTTCTGCTTAGCAAGCTCAGCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 |
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| CDS TCA 90 bp | CAGGAGCTTCTGCGCAGCCTCAAGCAAGGGCTGTGCGGTCAGCCTTaGGTGCCCCGCCTCCTTCTCCTTCAGTGCCAGTTCCTGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QELLRSLKQGLCGQP*VPRLLLLQCQFLQQ Trigger: TTGCTGCAGGAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGCCCTTGCTTGAGGCTGCGCAGAAGCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000154809.8 |
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| CDS GCA 90 bp | AGCTTCTGCGCAGCCTCAAGCAAGGGCTGTGCGGTCAGCCTTGAGTaGCCCGCCTCCTTCTCCTTCAGTGCCAGTTCCTGGGCCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFCAASSKGCAVSLE*PASFSFSASSWARE Trigger: TTCTCTGGCCCAGGAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGCCCTTGCTTGAGGCTGCGCAGAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 ENSMUST00000141567.8 |
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| CDS GCA 90 bp | AGCTTCTGCGCAGCCTCAAGCAAGGGCTGTGCGGTCAGCCTTGAGTaGCCCGCCTCCTTCTCCTTCAGTGCCAGTTCCTGCAGCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFCAASSKGCAVSLE*PASFSFSASSCSKQ Trigger: CTGCTTGCTGCAGGAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGCCCTTGCTTGAGGCTGCGCAGAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000154809.8 |
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| CDS CCA 90 bp | GTCAGCCTTGAGTGCCCCGCCTCCTTCTCCTTCAGTGCCAGTTCCTaGGCCAGAGAATCGATCTCCTCTTCCAGTCTGGGCTGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLECPASFSFSASS*ARESISSSSLGWGR Trigger: CCTGCCCCAGCCCAGACTGGAAGAGGAGATCGATTCTCTGGCCCAGGAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071442.12 ENSMUST00000133409.2 ENSMUST00000141567.8 |
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| CDS CCA 90 bp | AAAGCCAGGATCAGCACAAGGGTGAGGCCATTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATCTGCACAGGTCCAGAGGATGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KARISTRVRPFPCLP*GSSGDICTGPEDAR Trigger: CCGAGCATCCTCTGGACCTGTGCAGATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCACCCTTGTGCTGATCCTGGCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 |
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| CDS CCA 90 bp | GCAGCGGCGGCAAGGAATGGGGACCAGGCACTGGTGCTGACAGCGTaGAATGGTCAAACAGTGGGTTGCGCACCTCCATCTCCCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAAARNGDQALVLTA*NGQTVGCAPPSPLL Trigger: CAACAGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACGCTGTCAGCACCAGTGCCTGGTCCCCATTCCTTGCCGCCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS GCA 90 bp | GGACTGAAGGCATGGTCCACAGGCATGTGCCCCTGGTGGGCATTTTaGCCGCCTCTTCAGTGCACAATCCAGGCTTCCAGGACAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLKAWSTGMCPWWAF*PPLQCTIQASRTGG Trigger: ACCACCTGTCCTGGAAGCCTGGATTGTGCACTGAAGAGGCGGGCAAAATGCCCACCAGGGGCACATGCCTGTGGACCATGCCTTCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS CCA 90 bp | TGGCACACAGAACCCTCGCTGGTCTTCCTGGAAGGACTGAAGGCATaGTCCACAGGCATGTGCCCCTGGTGGGCATTTTGCCCGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WHTEPSLVFLEGLKA*STGMCPWWAFCPPL Trigger: AAGAGGCGGGCAAAATGCCCACCAGGGGCACATGCCTGTGGACCATGCCTTCAGTCCTTCCAGGAAGACCAGCGAGGGTTCTGTGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS-3UTR CAA 90 bp | AACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCATGTGGGAAGATAGGTGTTTCCTaGGCACACAGAACCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NTRTRSSPLVGCGLQACGKIGVS*AHRTLA Trigger: AGCGAGGGTTCTGTGTGCCAAGGAAACACCTATCTT...CCCACATGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCAAAGATAGGTGTTTCCTaGGCACACAGAACCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAKIGVS*AHRTLA Trigger: AGCGAGGGTTCTGTGTGCCAAGGAAACACCTATCTT...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS GCA 90 bp | TCGCTGGTCTTCCTGGAAGGACTGAAGGCATGGTCCACAGGCATGTaGCCCTGGTGGGCATTTTGCCCGCCTCTTCAGTGCACAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLVFLEGLKAWSTGM*PWWAFCPPLQCTIQ Trigger: CTGGATTGTGCACTGAAGAGGCGGGCAAAATGCCCACCAGGGGCACATGCCTGTGGACCATGCCTTCAGTCCTTCCAGGAAGACCAGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS TCA 90 bp | TGTTTCCTTGGCACACAGAACCCTCGCTGGTCTTCCTGGAAGGACTaGAGGCATGGTCCACAGGCATGTGCCCCTGGTGGGCATTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLGTQNPRWSSWKD*RHGPQACAPGGHFA Trigger: GGCAAAATGCCCACCAGGGGCACATGCCTGTGGACCATGCCTTCAGTCCTTCCAGGAAGACCAGCGAGGGTTCTGTGTGCCAAGGAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS CCA 90 bp | CGTGGAATGGTCAAACAGTGGGTTGCGCACCTCCATCTCCCCTGTTaGCGCCAGGCCTGGGCATTCATACACAGTGAAGTCGCCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGMVKQWVAHLHLPC*RQAWAFIHSEVAIF Trigger: GAAGATGGCGACTTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS TCA 90 bp | AGGTCCAGAGGATGCTCGGGAACTCAAGGAAGTATGGGGTATAGGTaGAGAGGTTCCATGAGTAGAGGGGAGCCCGGGCTCCAGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSRGCSGTQGSMGYR*RGSMSRGEPGLQSL Trigger: CAACGACTGGAGCCCGGGCTCCCCTCTACTCATGGAACCTCTTCACCTATACCCCATACTTCCTTGAGTTCCCGAGCATCCTCTGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 ENSMUST00000141567.8 |
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| CDS-3UTR CAA 90 bp | ATGGGGAACACCAGGACTCGCTCGTCCCCACTGGTGGGCTGTGGGCTGCAGGCACAAAGTTTCACTATCTaGGTTTCCATGGTGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: MGNTRTRSSPLVGCGLQAQSFTI*VSMVTT Trigger: AGTTGTCACCATGGAAACCAAGATAGTGAAACTTTG...TGCCTGCAGCCCACAGCCCACCAGTGGGGACGAGCGAGTCCTGGTGTTCCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055921.14 |
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| CDS CCA 90 bp | AAACAGTGGGTTGCGCACCTCCATCTCCCCTGTTGGCGCCAGGCCTaGGCATTCATACACAGTGAAGTCGCCATCTTCATTTTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KQWVAHLHLPCWRQA*AFIHSEVAIFIFLI Trigger: GATGAGGAAAATGAAGATGGCGACTTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGGTGCGCAACCCACTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS-3UTR CAA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAGCTGTGCGGTCAGCCTaGAGTGCCCCGCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WISSLRVHTRQRMCKQMLAVRSA*SAPPPS Trigger: AGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGC...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS TCA 90 bp | AGATGGAGGGTCCCATCCAAAGTTTCACTATCTTGGTTTCCATGGTaGCAACAGAAGATAGGTGTTTCCTTGGCACACAGAACCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWRVPSKVSLSWFPW*QQKIGVSLAHRTLA Trigger: AGCGAGGGTTCTGTGTGCCAAGGAAACACCTATCTTCTGTTGTCACCATGGAAACCAAGATAGTGAAACTTTGGATGGGACCCTCCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154809.8 |
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| CDS-3UTR CAA 90 bp | TGGATCTCCAGTTTGAGGGTTCATACCAGACAGAGAATGTGCAAGCAGATGCTAAAGATAGGTGTTTCCTaGGCACACAGAACCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: WISSLRVHTRQRMCKQMLKIGVS*AHRTLA Trigger: AGCGAGGGTTCTGTGTGCCAAGGAAACACCTATCTT...TAGCATCTGCTTGCACATTCTCTGTCTGGTATGAACCCTCAAACTGGAGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS TCA 90 bp | AGATGGAGGGTCCCATCCAAAGTTTCACTATCTTGGTTTCCATGGTaGCAACTGAGGGATCAGAAGATAGGTGTTTCCTTGGCACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWRVPSKVSLSWFPW*QLRDQKIGVSLAHR Trigger: TCTGTGTGCCAAGGAAACACCTATCTTCTGATCCCTCAGTTGTCACCATGGAAACCAAGATAGTGAAACTTTGGATGGGACCCTCCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055921.14 |
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| CDS CCA 72 bp | GAGGAGCCAAGGGTGAGGCCATTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATCTGCACAGGTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EEPRVRPFPCLP*GSSGDICTGPE Trigger: CTCTGGACCTGTGCAGATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCACCCTTGGCTCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133409.2 |
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| CDS TCA 72 bp | CTGCGCAGCCTCAAGCAAGGGCTGTGCGGTCAGCCTTaGGTGCCCCGCCTCCTTCTCCTTCAGTGCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRSLKQGLCGQP*VPRLLLLQCQF Trigger: GAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGCCCTTGCTTGAGGCTGCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS CAA 90 bp | CCAGGAGCTTCTGCGCAGCCTCAAGCAAGGGCTGTGCGGTCAGCCTaGAGTGCCCCGCCTCCTTCTCCTTCAGTGCCAGTTCCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGASAQPQARAVRSA*SAPPPSPSVPVPAA Trigger: TGCTGCAGGAACTGGCACTGAAGGAGAAGGAGGCGGGGCACTCAAGGCTGACCGCACAGCCCTTGCTTGAGGCTGCGCAGAAGCTCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055921.14 ENSMUST00000154809.8 |
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| CDS CAA 90 bp | GGACCAGGCACTGGTGCTGACAGCGTGGAATGGTCAAACAGTGGGTaGCGCACCTCCATCTCCCCTGTTGGCGCCAGGCCTGGGCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPGTGADSVEWSNSG*RTSISPVGARPGHS Trigger: TGAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACGCTGTCAGCACCAGTGCCTGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS GCA 72 bp | GGCAATATGGAGGAGCCAAGGGTGAGGCCATTCCCATaGCTTCCCTGGGGCTCCAGCGGGGACATCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: GNMEEPRVRPFP*LPWGSSGDICT Trigger: TGTGCAGATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCACCCTTGGCTCCTCCATATTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133409.2 |
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| CDS CCA 72 bp | ATCAGCACAAGGGTGAGGCCATTCCCATGCCTTCCCTaGGGCTCCAGCGGGGACATCTGCACAGGTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISTRVRPFPCLP*GSSGDICTGPE Trigger: CTCTGGACCTGTGCAGATGTCCCCGCTGGAGCCCCAGGGAAGGCATGGGAATGGCCTCACCCTTGTGCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 |
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| CDS CAA 72 bp | ACTGGTGCTGACAGCGTGGAATGGTCAAACAGTGGGTaGCGCACCTCCATCTCCCCTGTTGGCGCCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGADSVEWSNSG*RTSISPVGARP Trigger: AGGCCTGGCGCCAACAGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACGCTGTCAGCACCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS CAA 90 bp | AGGACTGAAGGCATGGTCCACAGGCATGTGCCCCTGGTGGGCATTTaGCCCGCCTCTTCAGTGCACAATCCAGGCTTCCAGGACAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTEGMVHRHVPLVGI*PASSVHNPGFQDRW Trigger: CCACCTGTCCTGGAAGCCTGGATTGTGCACTGAAGAGGCGGGCAAAATGCCCACCAGGGGCACATGCCTGTGGACCATGCCTTCAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS GCA 72 bp | TTCCTGGAAGGACTGAAGGCATGGTCCACAGGCATGTaGCCCTGGTGGGCATTTTGCCCGCCTCTTCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLEGLKAWSTGM*PWWAFCPPLQC Trigger: GCACTGAAGAGGCGGGCAAAATGCCCACCAGGGGCACATGCCTGTGGACCATGCCTTCAGTCCTTCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS CCA 72 bp | GAATGGGGACCAGGCACTGGTGCTGACAGCGTGGAATaGTCAAACAGTGGGTTGCGCACCTCCATCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EWGPGTGADSVE*SNSGLRTSISP Trigger: AGGGGAGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACGCTGTCAGCACCAGTGCCTGGTCCCCATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS GCA 72 bp | ATGTGCCCCTGGTGGGCATTTTGCCCGCCTCTTCAGTaGACAATCCAGGCTTCCAGGACAGGTGGTAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: MCPWWAFCPPLQ*TIQASRTGGSI Trigger: GATGCTACCACCTGTCCTGGAAGCCTGGATTGTGCACTGAAGAGGCGGGCAAAATGCCCACCAGGGGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000141567.8 ENSMUST00000154809.8 |
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| CDS CCA 72 bp | GCAAGGAATGGGGACCAGGCACTGGTGCTGACAGCGTaGAATGGTCAAACAGTGGGTTGCGCACCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ARNGDQALVLTA*NGQTVGCAPPS Trigger: AGATGGAGGTGCGCAACCCACTGTTTGACCATTCCACGCTGTCAGCACCAGTGCCTGGTCCCCATTCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS CCA 72 bp | GTTGCGCACCTCCATCTCCCCTGTTGGCGCCAGGCCTaGGCATTCATACACAGTGAAGTCGCCATCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: VAHLHLPCWRQA*AFIHSEVAIFI Trigger: AATGAAGATGGCGACTTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACAGGGGAGATGGAGGTGCGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS TCA 72 bp | CCCCTGTTGGCGCCAGGCCTGGGCATTCATACACAGTaGAGTCGCCATCTTCATTTTCCTCATCGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLAPGLGIHTQ*SRHLHFPHRRK Trigger: CTTCCTCCGATGAGGAAAATGAAGATGGCGACTTCACTGTGTATGAATGCCCAGGCCTGGCGCCAACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS GCA 72 bp | TCTCTGGTGCTGATAATGATACATCTCAGCACTGTGTaGCAGCCGCTGATCCCCAGGCGAGATTCGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLVLIMIHLSTV*QPLIPRRDSWC Trigger: ACACCACGAATCTCGCCTGGGGATCAGCGGCTGGCACACAGTGCTGAGATGTATCATTATCAGCACCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
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| CDS CAA 90 bp | CGCCATCTTCATTTTCCTCATCGGAGGAAGCTGACTCTAGTTCCTTaGGAGGTTCCTTATGCCGCTCCAGGCACAGCATCTGCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RHLHFPHRRKLTLVP*EVPYAAPGTASAVS Trigger: AGAGACAGCAGATGCTGTGCCTGGAGCGGCATAAGGAACCTCCAAAGGAACTAGAGTCAGCTTCCTCCGATGAGGAAAATGAAGATGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS CAA 72 bp | CATTTTCCTCATCGGAGGAAGCTGACTCTAGTTCCTTaGGAGGTTCCTTATGCCGCTCCAGGCACAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HFPHRRKLTLVP*EVPYAAPGTAS Trigger: AGATGCTGTGCCTGGAGCGGCATAAGGAACCTCCAAAGGAACTAGAGTCAGCTTCCTCCGATGAGGAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055921.14 ENSMUST00000071442.12 ENSMUST00000133409.2 |
||
| CDS CAA 72 bp | CCGGAGATGGAGGGTCCCATCCAAAGTTTCACTATCTaGGTTTCCATGGTGACAACTGAGGGATCAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PEMEGPIQSFTI*VSMVTTEGSED Trigger: ATCTTCTGATCCCTCAGTTGTCACCATGGAAACCAAGATAGTGAAACTTTGGATGGGACCCTCCATCTCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055921.14 |
||
| CDS CAA 72 bp | CCGGAGATGGAGGGTCCCATCCAAAGTTTCACTATCTaGGTTTCCATGGTGACAACAGAAGATAGGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PEMEGPIQSFTI*VSMVTTEDRCF Trigger: GAAACACCTATCTTCTGTTGTCACCATGGAAACCAAGATAGTGAAACTTTGGATGGGACCCTCCATCTCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154809.8 |
||
| CDS TCA 72 bp | GTCCCATCCAAAGTTTCACTATCTTGGTTTCCATGGTaGCAACAGAAGATAGGTGTTTCCTTGGCACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: VPSKVSLSWFPW*QQKIGVSLAHR Trigger: TCTGTGTGCCAAGGAAACACCTATCTTCTGTTGTCACCATGGAAACCAAGATAGTGAAACTTTGGATGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154809.8 |
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