Pregenerated sensors for NPC1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020447Ensembl transcript IDs: ENSMUST00000004505.3
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCATACAATACTCAAGATATTCTCTTTACAGAGGAGGTAATCTaGTCATGGCCTCGGGGACCTATGACAACAAAGTGGCCAGTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: IPYNTQDILFTEEVI*SWPRGPMTTKWPVL Trigger: CAGCACTGGCCACTTTGTTGTCATAGGTCCCCGAGGCCATGATCAGATTACCTCCTCTGTAAAGAGAATATCTTGAGTATTGTATGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR CCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCCAAAGTGGCCAGTGCTaGCTGCCTCAGGACAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HMANYLCSGTTATRSQVSQSGQC*LPQDKN Trigger: ATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTG...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR CCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCCCTATGACAACAAAGTaGCCAGTGCTGGCTGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: HMANYLCSGTTATRSQVSPMTTK*PVLAAS Trigger: TGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACACAGAGGAGGTAATCTaGTCATGGCCTCGGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: RSQVSFIPESFLLLDVPHTEEVI*SWPRGP Trigger: AGGTCCCCGAGGCCATGATCAGATTACCTCCTCTGT...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR GCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCAACAAAGTGGCCAGTaGTGGCTGCCTCAGGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: RSQVSFIPESFLLLDVPHQQSGQ*WLPQDK Trigger: CTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTG...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR CCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCTATCAGCAAGAACCATaGAGCCTGGACAAGCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: HMANYLCSGTTATRSQVSYQQEP*SLDKLL Trigger: TAGGAGCTTGTCCAGGCTCCATGGTTCTTGCTGATA...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTGAGGGAAGACCCTCGTaGCCCCTTATCAGCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SQVSFIPESFLLLDVPHPEGRPS*PLISKN Trigger: GTTCTTGCTGATAAGGGGCCACGAGGGTCTTCCCTC...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTACTTTCCCCAGGCCTTaGAAACAACCAGAGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KCPLSQNPFFSWMFHTLFTFPRP*KQPEGR Trigger: TCTTCCCTCTGGTTGTTTCCAAGGCCTGGGGAAAGT...AAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTAACTTTCCCCAGGCCTaGGAAACAACCAGAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVSFIPESFLLLDVPHPINFPQA*ETTRGK Trigger: CTTCCCTCTGGTTGTTTCCAAGGCCTGGGGAAAGTT...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCATGGCCTCGGGGACCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAACTCGGCTCCATCTaGAGTAGCTGCCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWPRGPMTTKWPVLAASGQLGSI*SSCPGP Trigger: TGGCCCTGGGCAGCTACTCCAGATGGAGCCGAGTTG...TCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGGTCCCCGAGGCCATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAACCATCTGCCAGGGCCTaGCCAGGCTCCAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQPSARA*PGSKRW Trigger: CCACCTCTTGGAGCCTGGCCAGGCCCTGGCAGATGG...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGCCGGGGGCGGAGGGATaGCAGGGCAGGATGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESFLLLDVPHPISCLSHRPGAEG*QGRMLH Trigger: GTGCAGCATCCTGCCCTGTCATCCCTCCGCCCCCGG...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | TCATGGCCTCGGGGACCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGAGGGCGGATGAATCTGTaGAGCAGGAAGGGAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SWPRGPMTTKWPVLAASGGRMNL*SRKGVY Trigger: ATACACTCCCTTCCTGCTGCACAGATTCATCCGCCC...TCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGGTCCCCGAGGCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGAGCCAGCGAGGCAGCTaGAGGGATGCGCACCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPRILSSPGCSTPYFLPKSQRGS*RDAHPA Trigger: AGCCGGGTGCGCATCCCTGCAGCTGCCTCGCTGGCT...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAAGCCAGCGCTGAGCATTaGAGAGGGCAGAGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQASAEH*RGQSHT Trigger: TGTATGGCTCTGCCCTCTGCAATGCTCAGCGCTGGC...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCGACAGGGCAGGATGCTaGACAGTCCTGGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HMANYLCSGTTATRSQVSDRAGC*TVLAGT Trigger: TGTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTC...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAACCAGGCTCCAAGAGGTaGAAGGTGATGTCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQPGSKR*KVMSSG Trigger: TCCGCTGGACATCACCTTCCACCTCTTGGAGCCTGG...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTCCTCCCAGAGCTTaGCGTGGGCCATGCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHPPPRA*RGPCGD Trigger: ATCCCCGCATGGCCCACGCCAAGCTCTGGGAGGAGG...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCAGGAGTAGAAGCCCATaGCAGCCACGACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMANYLCSGTTATRSQVSRSRSP*QPRLLP Trigger: TGGGAGCAGTCGTGGCTGCCATGGGCTTCTACTCCT...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCCCAAGAGGTGGAAGGTaGTGTCCAGCGGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPAPRGGR*CPAEPG Trigger: GCCTGGCTCCGCTGGACATCACCTTCCACCTCTTGG...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACGGCTGCACAGCAGCATaGTGGGGGCCACACTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHGCTAA*WGPHYP Trigger: TGGGTAGTGTGGCCCCCAGCATGCTGCTGTGCAGCC...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTGCTTACGAGGGAGGTTaGGGGCTTCCTGGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQVSFIPESFLLLDVPHPAYEGG*GLPGSL Trigger: CAGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGC...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCGACAGTGAGTGGCCATaGGGCCACCCTTGTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPADSEWP*GHPCSP Trigger: TGGGGAACAAGGGTGGCCTCATGGCCACTCACTGTC...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACTACCCCACACAGCCATaGGGCCGATGGTGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHYPTQP*GRWCPR Trigger: TCGTGGACACCATCGGCCTCATGGCTGTGTGGGGTA...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGACACTCCACACATGCTaGCCACAGCCAGCGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESFLLLDVPHPISCLSHRTLHTC*PQPARQ Trigger: CTGCCTCGCTGGCTGTGGGCAGCATGTGTGGAGTGT...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGTGGCTTCATCCCATCTaGCAGGGCCTGGCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPRILSSPGCSTPYFLPKWLHPI*QGLARL Trigger: GAGCCTGGCCAGGCCCTGGCAGATGGGATGAAGCCA...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCCATGGCAGCCACGACTaGTCCCAGCACAACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPAHGSHD*SQHNSH Trigger: GTGGCTGTTGTGCTGGGAGCAGTCGTGGCTGCCATG...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCTCAGGTAGGAATCCTTaGGCAGAGCCAGATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMANYLCSGTTATRSQVSSGRNP*AEPDPG Trigger: ACCAGGATCTGGCTCTGCCCAAGGATTCCTACCTGA...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGAAGTTGAGCCAGCGCTaGGCATTGCAGAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESFLLLDVPHPISCLSHRKLSQR*ALQRAE Trigger: CTCTGCCCTCTGCAATGCTCAGCGCTGGCTCAACTT...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAATGGTGTTATGCGGTTTaGGGGGAGCATAGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQWCYAV*GEHSRC Trigger: ACATCTGCTATGCTCCCCTCAAACCGCATAACACCA...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCCTGGAGGGAGATGTTaGGCTGTGCCTCATGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCPGGRC*AVPHGT Trigger: GGTCCCATGAGGCACAGCGCAACATCTCCCTCCAGG...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGGGCCACGGGTATAAATaGGGCAGCAGGAGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ESFLLLDVPHPISCLSHRGHGYK*GSRRRM Trigger: CATCCTCCTCCTGCTGCCGCATTTATACCCGTGGCC...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCATAGTCACTGGTGTTTaGATCAGCCGGGAAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HMANYLCSGTTATRSQVSIVTGV*ISREGV Trigger: TACCCCTTCCCGGCTGATGCAAACACCAGTGACTAT...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTGGAGAAGAGCCAGGTaGTCACCTGTGACATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPAWRRAR*SPVTWR Trigger: CCGCCATGTCACAGGTGACCACCTGGCTCTTCTCCA...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCAGGTTGGGGGCTTCCTaGGAGCCTGCTGTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPARLGAS*EPAVLF Trigger: GAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCT...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTCCTCACAGCTGGCATaGAGGTCAGGGCCCCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPASSQLA*RSGPLE Trigger: TTCTAGGGGCCCTGACCTCCATGCCAGCTGTGAGGA...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTGGCAGAGCCAGATCCTaGTCCAGCCCCACGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QVSFIPESFLLLDVPHPIGRARS*SSPTLM Trigger: CATCAGCGTGGGGCTGGACCAGGATCTGGCTCTGCC...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACGGATGCCCGGGAAGTTaGTCATGGCCACTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHGCPGS*SWPLQQ Trigger: TTGCTGGAGTGGCCATGACCAACTTCCCGGGCATCC...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGGGGTCAGCCAGTCGATaGAGTCATCTACCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPRILSSPGCSTPYFLPKGSASR*SHLPRR Trigger: CCTCCTGGGTAGATGACTTCATCGACTGGCTGACCC...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTCAGGTTGAGGATGCCTaGGCGTATGTCCAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSFIPESFLLLDVPHPIQVEDA*AYVQAQ Trigger: CTGGGCCTGGACATACGCTCAGGCATCCTCAACCTG...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCTCTAATGACACCAGCTaGTTGGTAGAGCAACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HMANYLCSGTTATRSQVSSNDTS*LVEQQA Trigger: TGCCTGTTGCTCTACCAAGCAGCTGGTGTCATTAGA...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTAGCTCCAACAGCTCCTaGAGCAAGTCCAGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVSFIPESFLLLDVPHPSSNSS*SKSRDR Trigger: CCTATCCCTGGACTTGCTGCAGGAGCTGTTGGAGCT...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCGCCGAGTCTTCACCCTaGGACTCATTGCAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCAESSP*DSLQGV Trigger: CACACCCTGCAATGAGTCCCAGGGTGAAGACTCGGC...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACTGGCCATTCAGAGTCTaGTTGGCTGTGAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHWPFRV*LAVSSR Trigger: CCTGCTGCTCACAGCCAACCAGACTCTGAATGGCCA...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACAAGGACAGTGTGAGGTaGGAATCTGCGCTTACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHKDSVR*ESALTR Trigger: CCTCGTAAGCGCAGATTCTCACCTCACACTGTCCTT...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAAAAGAAGGGGCCAAAATaGTCGTCATGGAAAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQKKGPK*SSWKAF Trigger: AAAGGCTTTCCATGACGAGCATTTTGGCCCCTTCTT...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCGGAGATGTTGCGCTGTaGCTCATGGGACCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCGDVAL*LMGPHL Trigger: CAAGTGTGGTCCCATGAGGCACAGCGCAACATCTCC...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACGCCTCCAGAAAGCTCTaGGTTCTTCCCACACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHASRKL*VLPTLF Trigger: GAAGAGTGTGGGAAGAACCCAGAGCTTTCTGGAGGC...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAACCAAAATGCTCGTCATaGAAAGCCTTTTCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQPKCSS*KAFSFR Trigger: CCGGAAAGAAAAGGCTTTCCATGACGAGCATTTTGG...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCTTGCGCTGTGCCTCATaGGACCACACTTGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCLRCAS*DHTCRC Trigger: ACACCTGCAAGTGTGGTCCCATGAGGCACAGCGCAA...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTGCAGCAGGAGGAGGATaGGGTCAGCCAGTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVSFIPESFLLLDVPHPIAAGGG*GQPVDE Trigger: TTCATCGACTGGCTGACCCCATCCTCCTCCTGCTGC...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTGAAACTGTTCTGTTGTaGGTCTCACGGGACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQVSFIPESFLLLDVPHPETVLL*VSRDPE Trigger: CTCTGGGTCCCGTGAGACCCACAACAGAACAGTTTC...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACAAGGACCGGGTAATGTaGGACACGAACTCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHKDRVM*DTNSTD Trigger: GTCTGTGGAGTTCGTGTCCCACATTACCCGGTCCTT...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTCCATGGCTGCCTCAGTaGCTAGTTTCTCCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQVSFIPESFLLLDVPHPPWLPQ*LVSPPV Trigger: TACTGGAGGAGAAACTAGCCACTGAGGCAGCCATGG...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCGGTCCAGCCCCACGCTaGTGTTGCACATTAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCGPAPR*CCTLSR Trigger: TCTACTTAATGTGCAACATCAGCGTGGGGCTGGACC...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAACTTCTCTGGAAGGATTaGATTTCCTTCAAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PMTTKWPVLAASGQECQQLLWKD*ISFKKA Trigger: GGCTTTCTTGAAGGAAATGCAATCCTTCCAGAGAAG...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTTCCATCTGGAGTAGCTaGCCAGGGCCAGGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KCPLSQNPFFSWMFHTLFSIWSS*PGPGRC Trigger: ACATCTCCCTGGCCCTGGGCAGCTACTCCAGATGGA...AAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCTCATGCCTGCCTCGGTaGAAAAGTTGTAGCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCSCLPR*KSCSLR Trigger: CCTCAGGCTACAACTTTTCCACCGAGGCAGGCATGA...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTATTGGATAGTGATGTaGGGCCTCCAGAAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPAYWIVM*GLQKAL Trigger: CAGAGCTTTCTGGAGGCCTCACATCACTATCCAATA...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCAGAGAACGCTCAGCTaGGAACGCAATCTGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YPRILSSPGCSTPYFLPKQRTLS*ERNLEL Trigger: AAGTTCCAGATTGCGTTCTCAGCTGAGCGTTCTCTG...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCGTAGTTCAGCTGTaGTGTTGGCTGCTAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: QVSFIPESFLLLDVPHPISVVQL*CWLLAT Trigger: GGTTGCTAGCAGCCAACATCACAGCTGAACTACGGA...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGAGCAGAGAGCAAGAGTaGAGATTCCCTCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YPRILSSPGCSTPYFLPKSREQE*RFPQGE Trigger: TTCTCCCTGAGGGAATCTTCACTCTTGCTCTCTGCT...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGAACTATGAAGGACAGTaGCAAGACAGTGAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESFLLLDVPHPISCLSHRNYEGQ*QDSEWP Trigger: TGGCCACTCACTGTCTTGGCACTGTCCTTCATAGTT...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTTGATGAAGAGGCTCTaGTCAGGGCTGCAGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPALMKRL*SGLQVL Trigger: TAATACCTGCAGCCCTGACCAGAGCCTCTTCATCAA...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGGCTGTCACAAAAATCTaGTTGGTTCGGAAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESFLLLDVPHPISCLSHRAVTKI*LVRKKG Trigger: CCCCTTCTTCCGAACCAACCAGATTTTTGTGACAGC...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCGGGCTGCAGGTATTATaGCAGTGTATGCTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPAGLQVL*QCMLTK Trigger: TTTTGTGAGCATACACTGTCATAATACCTGCAGCCC...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGCCCCGTAGTCAGCTATaGAGCTCAGGGCCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQPRSQL*SSGPGL Trigger: CAGCCCTGGCCCTGAGCTGCATAGCTGACTACGGGG...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTGTTCTTGTTCCTGTTaGAAGCCACTCGGAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPACSCSC*KPLGDT Trigger: TGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACA...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACACAAAGGCTGTCATCTaGAGCAGGAAGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHTKAVI*SRKSKM Trigger: CATCTTTGACTTCCTGCTCCAGATGACAGCCTTTGT...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACGCATACTGGATTTTCTaGGTTAGGGAGAAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQVSFIPESFLLLDVPHAYWIF*VREKLS Trigger: TGAGAGCTTCTCCCTAACCCAGAAAATCCAGTATGC...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTTGGGAGGCTATAATCTaGCCATCTGAGCTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SQVSFIPESFLLLDVPHPWEAII*PSELKF Trigger: GAATTTGAGCTCAGATGGCCAGATTATAGCCTCCCA...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTGCAGGAAGTCAAAGATaGTTGCTAAGCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSFIPESFLLLDVPHPIAGSQR*LLSQRS Trigger: TGACCTCTGGCTTAGCAATCATCTTTGACTTCCTGC...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGGAGCAAAGCCCAGGATaGGGATGCCCGGGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQEQSPG*GCPGSW Trigger: CCAACTTCCCGGGCATCCTCATCCTGGGCTTTGCTC...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCACTCTTCATAAAAGGTaGAGAAGCCAGCTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSQNPFFSWMFHTLFPATLHKR*RSQLCE Trigger: CTCACAAAGCTGGCTTCTGCACCTTTTATGAAGAGT...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCTCACAAAAATCTGGTTaGTTCGGAAGAAGGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFIPESFLLLDVPHPISCSQKSG*FGRRGQ Trigger: TTGGCCCCTTCTTCCGAACCAACCAGATTTTTGTGA...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGGGGATAGGATCCCACTaGAGTTCTTGGGCCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQGIGSH*SSWALA Trigger: TGCTAGGGCCCAAGAACTTCAGTGGGATCCTATCCC...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTTTGTTCTGGAAGTATTaGAGGAGGCTGTTGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KCPLSQNPFFSWMFHTLFLFWKY*RRLLTQ Trigger: CTGTGTCAACAGCCTCCTTCAATACTTCCAGAACAA...AAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTAATTCACTGGCATACTaGATTTTCTGGGTTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSFIPESFLLLDVPHPINSLAY*IFWVRE Trigger: CTCCCTAACCCAGAAAATCCAGTATGCCAGTGAATT...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGTGCCATCTTTGTACGTaGGAGGGGCATTGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQCHLCT*EGHWHS Trigger: ACTGTGCCAATGCCCCTCTCACGTACAAAGATGGCA...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTACTCAAGAACAAAGATaGAGATGTTGTCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCPLSQNPFFSWMFHTLFTQEQR*RCCQLP Trigger: TGGGAGCTGACAACATCTTCATCTTTGTTCTTGAGT...AAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTTATAATCTGGCCATCTaGGCTCAAATTCACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCPLSQNPFFSWMFHTLFYNLAI*AQIHRG Trigger: ACCTCTGTGAATTTGAGCTCAGATGGCCAGATTATA...AAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGAGGCATAGGTGTCATTaGGGCCATTGTATAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQRHRCH*GHCIGG Trigger: CCCGCCTATACAATGGCCCCAATGACACCTATGCCT...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGGGAAGACCTCAAAGTTaGGATCTGTCCCAGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQGRPQS*DLSQAP Trigger: AGGTGCCTGGGACAGATCCCAACTTTGAGGTCTTCC...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGAGCTTGGTTAACATCTaGCCCCAGATAGCTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQSLVNI*PQIAED Trigger: GTCCTCAGCTATCTGGGGCCAGATGTTAACCAAGCT...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CCA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGTTCAGGGATAAATTCTaGATTAAAGCCGTAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YPRILSSPGCSTPYFLPKFRDKF*IKAVVN Trigger: GTTAACTACGGCTTTAATCCAGAATTTATCCCTGAA...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGGGAACTTGTCAGCTGTaGTTCTCTGGAAGGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQGTCQL*FSGRIA Trigger: TGCAATCCTTCCAGAGAAGCACAGCTGACAAGTTCC...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR GCA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGCCTTCTCTGCAAAACTaGGTTGATAAAAGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICIYINLHFATWLITCAQPSLQN*VDKRPH Trigger: ATGAGGCCTTTTATCAACGCAGTTTTGCAGAGAAGG...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | CACAGCAGCATGCTGGGGGCCACACTACCCAGGGTGCGGCCAATGTaGGCCTCTCGCTGCTCCCCGGGCATCCTAGGCAGCCTCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HSSMLGATLPRVRPM*ASRCSPGILGSLWY Trigger: GTACCAGAGGCTGCCTAGGATGCCCGGGGAGCAGCGAGAGGCTCACATTGGCCGCACCCTGGGTAGTGTGGCCCCCAGCATGCTGCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | GAAAGAAGGGCGCAGGGCCGGGGGCGGAGGGATGACAGGGCAGGATaGTGCACAGTCCTGGCAGGAACAGGCTGCCGAGTCTTCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERRAQGRGRRDDRAG*CTVLAGTGCRVFTL Trigger: CAGGGTGAAGACTCGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTCATCCCTCCGCCCCCGGCCCTGCGCCCTTCTTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | TTCGACCCATGTAGAAAGAAGGGCGCAGGGCCGGGGGCGGAGGGATaGCAGGGCAGGATGCTGCACAGTCCTGGCAGGAACAGGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FDPCRKKGAGPGAEG*QGRMLHSPGRNRLP Trigger: CGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTCATCCCTCCGCCCCCGGCCCTGCGCCCTTCTTTCTACATGGGTCGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | AGGGCCGGGGGCGGAGGGATGACAGGGCAGGATGCTGCACAGTCCTaGCAGGAACAGGCTGCCGAGTCTTCACCCTGGGACTCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAGGGGMTGQDAAQS*QEQAAESSPWDSLQ Trigger: CTGCAATGAGTCCCAGGGTGAAGACTCGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTCATCCCTCCGCCCCCGGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | AGAGCCATACACTCCACACATGCTGCCCACAGCCAGCGAGGCAGCTaGAGGGATGCGCACCCGGCTACAGGACTCATAGGCCTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAIHSTHAAHSQRGS*RDAHPATGLIGLLC Trigger: GCAGAGAAGGCCTATGAGTCCTGTAGCCGGGTGCGCATCCCTGCAGCTGCCTCGCTGGCTGTGGGCAGCATGTGTGGAGTGTATGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | CCCCTAGAAAGAAGCAGATGGCCTCAGAGAGGCTGCACAGCAGCATaGTGGGGGCCACACTACCCAGGGTGCGGCCAATGTGAGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLERSRWPQRGCTAA*WGPHYPGCGQCEPL Trigger: GAGAGGCTCACATTGGCCGCACCCTGGGTAGTGTGGCCCCCAGCATGCTGCTGTGCAGCCTCTCTGAGGCCATCTGCTTCTTTCTAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | AGTGGCTTCATCCCATCTGCCAGGGCCTGGCCAGGCTCCAAGAGGTaGAAGGTGATGTCCAGCGGAGCCAGGCCATTCCCTGTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGFIPSARAWPGSKR*KVMSSGARPFPVSP Trigger: AGGAGACACAGGGAATGGCCTGGCTCCGCTGGACATCACCTTCCACCTCTTGGAGCCTGGCCAGGCCCTGGCAGATGGGATGAAGCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | GGTGTGATCTTCCCATCCAGTGGCTTCATCCCATCTGCCAGGGCCTaGCCAGGCTCCAAGAGGTGGAAGGTGATGTCCAGCGGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVIFPSSGFIPSARA*PGSKRWKVMSSGAR Trigger: CCTGGCTCCGCTGGACATCACCTTCCACCTCTTGGAGCCTGGCCAGGCCCTGGCAGATGGGATGAAGCCACTGGATGGGAAGATCACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | TCATGGCCTCGGGGACCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACGCTTACGAGGGAGGTaGGGGGCTTCCTGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWPRGPMTTKWPVLAASGRLRGR*GASWEP Trigger: AGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGCG...TCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGGTCCCCGAGGCCATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | CCCAGCTCTCGAAGAACCGGCCAAGGACAGTGTGAGGTGAGAATCTaGGCTTACGAGGGAGGTTGGGGGCTTCCTGGGAGCCTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSRRTGQGQCEVRI*AYEGGWGLPGSLLS Trigger: AGACAGCAGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGCGCAGATTCTCACCTCACACTGTCCTTGGCCGGTTCTTCGAGAGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAAGCCTCCTCCCAGAGCTaGGCGTGGGCCATGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMTTKWPVLAASGQECQQASSQS*AWAMRG Trigger: TCCCCGCATGGCCCACGCCAAGCTCTGGGAGGAGGC...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | GGAGCCAGGCCATTCCCTGTGTCTCCTTGGAAGTTGAGCCAGCGCTaGGCATTGCAGAGGGCAGAGCCATACACTCCACACATGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GARPFPVSPWKLSQR*ALQRAEPYTPHMLP Trigger: GGGCAGCATGTGTGGAGTGTATGGCTCTGCCCTCTGCAATGCTCAGCGCTGGCTCAACTTCCAAGGAGACACAGGGAATGGCCTGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | TTGAAAAGCAGCACACGACGTCGGGGCGAGAGGCCTCCTGCCTCTTaGTATCCAGGGAGAGCAGGGCCACAAAGGCTGTCATCTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSTRRRGERPPAS*YPGRAGPQRLSSGA Trigger: TGCTCCAGATGACAGCCTTTGTGGCCCTGCTCTCCCTGGATAGCAAGAGGCAGGAGGCCTCTCGCCCCGACGTCGTGTGCTGCTTTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | TTTCGGCTTGAAAAGCAGCACACGACGTCGGGGCGAGAGGCCTCCTaGCTCTTGCTATCCAGGGAGAGCAGGGCCACAAAGGCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FRLEKQHTTSGREAS*LLLSRESRATKAVI Trigger: GATGACAGCCTTTGTGGCCCTGCTCTCCCTGGATAGCAAGAGGCAGGAGGCCTCTCGCCCCGACGTCGTGTGCTGCTTTTCAAGCCGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | GTCTTCACCCTGGGACTCATTGCAGGGTGTGATCTTCCCATCCAGTaGCTTCATCCCATCTGCCAGGGCCTGGCCAGGCTCCAAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFTLGLIAGCDLPIQ*LHPICQGLARLQEV Trigger: CACCTCTTGGAGCCTGGCCAGGCCCTGGCAGATGGGATGAAGCCACTGGATGGGAAGATCACACCCTGCAATGAGTCCCAGGGTGAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | GATGCTGCACAGTCCTGGCAGGAACAGGCTGCCGAGTCTTCACCCTaGGACTCATTGCAGGGTGTGATCTTCCCATCCAGTGGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: DAAQSWQEQAAESSP*DSLQGVIFPSSGFI Trigger: GATGAAGCCACTGGATGGGAAGATCACACCCTGCAATGAGTCCCAGGGTGAAGACTCGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | CAATACAAAGACAGCAGTGAAGATGATGATGAGAGCCAGCCAGCCTaGCATTCGACCCATGTAGAAAGAAGGGCGCAGGGCCGGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QYKDSSEDDDESQPA*HSTHVERRAQGRGR Trigger: CCGCCCCCGGCCCTGCGCCCTTCTTTCTACATGGGTCGAATGCCAGGCTGGCTGGCTCTCATCATCATCTTCACTGCTGTCTTTGTATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | GGCCAAGGACAGTGTGAGGTGAGAATCTGCGCTTACGAGGGAGGTTaGGGGCTTCCTGGGAGCCTGCTGTCTTGTTCTTGTTCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GQGQCEVRICAYEGG*GLPGSLLSCSCSCW Trigger: CCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGCGCAGATTCTCACCTCACACTGTCCTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | TCCAGCCGGGTAGGCTTGGTGCTTACAGCAAAGGACCGGGTAATGTaGGACACGAACTCCACAGACATGCCCACTGCCGTGACAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRVGLVLTAKDRVM*DTNSTDMPTAVTRL Trigger: CAACCTTGTCACGGCAGTGGGCATGTCTGTGGAGTTCGTGTCCCACATTACCCGGTCCTTTGCTGTAAGCACCAAGCCTACCCGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | CATCAGCCGGGAAGGGGTACTGTGGGCAAGAAGGCTCTGAGACCATaGCTGCCTCAGTGGCTAGTTTCTCCTCCAGTACCAGAGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HQPGRGTVGKKALRP*LPQWLVSPPVPELG Trigger: ACCAAGCTCTGGTACTGGAGGAGAAACTAGCCACTGAGGCAGCCATGGTCTCAGAGCCTTCTTGCCCACAGTACCCCTTCCCGGCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | GGCTATCACAACTATGAAGGACAGTGCCAAGACAGTGAGTGGCCATaGGGCCACCCTTGTTCCCCAGCTCTCGAAGAACCGGCCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GYHNYEGQCQDSEWP*GHPCSPALEEPAKD Trigger: GTCCTTGGCCGGTTCTTCGAGAGCTGGGGAACAAGGGTGGCCTCATGGCCACTCACTGTCTTGGCACTGTCCTTCATAGTTGTGATAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | AGCTGCAGGGATGCGCACCCGGCTACAGGACTCATAGGCCTTCTCTaGAAAACTGCGTTGATAAAAGGCCTCATAGGCCACCACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRDAHPATGLIGLL*KTALIKGLIGHHSR Trigger: CCTGCTGTGGTGGCCTATGAGGCCTTTTATCAACGCAGTTTTGCAGAGAAGGCCTATGAGTCCTGTAGCCGGGTGCGCATCCCTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | ATCAGGAGGTTGAGGCGGAAGAAGAAAATCTGGATAAGCTGGGCCTaGGCAAAGCCCAGGATGAGGATGCCCGGGAAGTTGGTCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRRLRRKKKIWISWA*AKPRMRMPGKLVMA Trigger: GGCCATGACCAACTTCCCGGGCATCCTCATCCTGGGCTTTGCTCAGGCCCAGCTTATCCAGATTTTCTTCTTCCGCCTCAACCTCCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | GGATGCGCACCCGGCTACAGGACTCATAGGCCTTCTCTGCAAAACTaGGTTGATAAAAGGCCTCATAGGCCACCACAGCAGGAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCAPGYRTHRPSLQN*VDKRPHRPPQQEAV Trigger: GACAGCTTCCTGCTGTGGTGGCCTATGAGGCCTTTTATCAACGCAGTTTTGCAGAGAAGGCCTATGAGTCCTGTAGCCGGGTGCGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | CACACTTGCAGGTGTCGAAGTCTCTCCTGTAGCTCCAACAGCTCCTaGAGCAAGTCCAGGGATAGGATCCCACTGAAGTTCTTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HTCRCRSLSCSSNSS*SKSRDRIPLKFLGP Trigger: AGGGCCCAAGAACTTCAGTGGGATCCTATCCCTGGACTTGCTGCAGGAGCTGTTGGAGCTACAGGAGAGACTTCGACACCTGCAAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | AGAGCAAATGGCGTTCATGCCTGCCTCGGTGGAAAAGTTGTAGCCTaGGGTGGTGTCAAAGTACACTGGAGGCCCCACTTCCAAGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: RANGVHACLGGKVVA*GGVKVHWRPHFQVP Trigger: CGGTACTTGGAAGTGGGGCCTCCAGTGTACTTTGACACCACCTCAGGCTACAACTTTTCCACCGAGGCAGGCATGAACGCCATTTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | GGCCTCCAGAAAGCTCTGGGTTCTTCCCACACTCTTCATAAAAGGTaGAGAAGCCAGCTTTGTGAGTGGGTGTGTAGAGCTCACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQKALGSSHTLHKR*RSQLCEWVCRAHPG Trigger: CCCAGGGTGAGCTCTACACACCCACTCACAAAGCTGGCTTCTGCACCTTTTATGAAGAGTGTGGGAAGAACCCAGAGCTTTCTGGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAACGTGTAAGGAGGGCCTaGGTGATAGACAGGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: PMTTKWPVLAASGQECQQRVRRA*VIDRLL Trigger: CAGTAGCCTGTCTATCACCAAGGCCCTCCTTACACG...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGGAGGCCTCCTGCCTCTaGCTATCCAGGGAGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESFLLLDVPHPISCLSHREASCL*LSRESR Trigger: CCTGCTCTCCCTGGATAGCAAGAGGCAGGAGGCCTC...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CCTATGACAACAAAGTGGCCAGTGCTGGCTGCCTCAGGACAAGAATGCCAGCAACTCCAGTACCAGAGCTaGGTTAACATCTGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PMTTKWPVLAASGQECQQLQYQS*VNIWPQ Trigger: CTGGGGCCAGATGTTAACCAAGCTCTGGTACTGGAG...TTGCTGGCATTCTTGTCCTGAGGCAGCCAGCACTGGCCACTTTGTTGTCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | AGAGCAGGGCCACAAAGGCTGTCATCTGGAGCAGGAAGTCAAAGATaGTTGCTAAGCCAGAGGTCAAGGCAAAGGTCCTCACAGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGPQRLSSGAGSQR*LLSQRSRQRSSQLA Trigger: TGCCAGCTGTGAGGACCTTTGCCTTGACCTCTGGCTTAGCAATCATCTTTGACTTCCTGCTCCAGATGACAGCCTTTGTGGCCCTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | AAATGGTCCTTCCAGTCCACCAGGGAGGTCTGGCCATTCAGAGTCTaGTTGGCTGTGAGCAGCAGGAGTGTGTGGTTGTTCTGGAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KWSFQSTREVWPFRV*LAVSSRSVWLFWKY Trigger: ATACTTCCAGAACAACCACACACTCCTGCTGCTCACAGCCAACCAGACTCTGAATGGCCAGACCTCCCTGGTGGACTGGAAGGACCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | AAATGGCGTTCATGCCTGCCTCGGTGGAAAAGTTGTAGCCTGAGGTaGTGTCAAAGTACACTGGAGGCCCCACTTCCAAGTACCGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KWRSCLPRWKSCSLR*CQSTLEAPLPSTGS Trigger: TGAACCGGTACTTGGAAGTGGGGCCTCCAGTGTACTTTGACACCACCTCAGGCTACAACTTTTCCACCGAGGCAGGCATGAACGCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACTCCTGGAGGGAGATGTaGCGCTGTGCCTCATGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSQVSFIPESFLLLDVPHSWREM*RCASWD Trigger: GTCCCATGAGGCACAGCGCAACATCTCCCTCCAGGA...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACAGGATGCCCGGGAAGTaGGTCATGGCCACTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQVSFIPESFLLLDVPHRMPGK*VMATPA Trigger: TGCTGGAGTGGCCATGACCAACTTCCCGGGCATCCT...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | TGGTTGGCTGTGAGCAGCAGGAGTGTGTGGTTGTTCTGGAAGTATTaGAGGAGGCTGTTGACACAGCAGTCAGTGAGGCTGGTGTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: WLAVSSRSVWLFWKY*RRLLTQQSVRLVLC Trigger: GCATAACACCAGCCTCACTGACTGCTGTGTCAACAGCCTCCTTCAATACTTCCAGAACAACCACACACTCCTGCTGCTCACAGCCAACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | TTGCTCCAAACAGGACCAGAAAGAGCAGCAGCACAACAGGGCGGATaGATCTGTGCAGCAGGAAGGGAGTGTATATCTTGCGGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLQTGPERAAAQQGG*ICAAGRECISCGRS Trigger: GCTTCTTCCGCAAGATATACACTCCCTTCCTGCTGCACAGATTCATCCGCCCTGTTGTGCTGCTGCTCTTTCTGGTCCTGTTTGGAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | CATCTGATGTTGGGCGTATCATTCAGGAACCAGGGCAGGTACTTATaGAACTGTTCTGTTGTGGGTCTCACGGGACCCAGAGTGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLMLGVSFRNQGRYL*NCSVVGLTGPRVRF Trigger: GAACCGCACTCTGGGTCCCGTGAGACCCACAACAGAACAGTTTCATAAGTACCTGCCCTGGTTCCTGAATGATACGCCCAACATCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | ATCAGCGGGGTAGTTATTGATAGAGAAGGTTATGATCAGGGCTTCTaGCTCCGAGTAGTCCGTCCCTTGGTAGCCCCCAACAGCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISGVVIDREGYDQGF*LRVVRPLVAPNSKE Trigger: TTCCTTGCTGTTGGGGGCTACCAAGGGACGGACTACTCGGAGGCAGAAGCCCTGATCATAACCTTCTCTATCAATAACTACCCCGCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | GGTTGGGGGCTTCCTGGGAGCCTGCTGTCTTGTTCTTGTTCCTGTTaGAAGCCACTCGGAGATACACAAGGACAACAGAGAGCAATACAA | + |
|
Preference number: 5 (lower is better) Translates to: GWGLPGSLLSCSCSC*KPLGDTQGQQRAIQ Trigger: TTGTATTGCTCTCTGTTGTCCTTGTGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCACAAAGATGAAGATGTaGTCAGCTCCCACAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HMANYLCSGTTATRSQVSTKMKM*SAPTAS Trigger: GCTGGCTGTGGGAGCTGACAACATCTTCATCTTTGT...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCGGGAAGACCTCAAAGTaGGGATCTGTCCCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLSQNPFFSWMFHTLFPAGKTSK*GSVPGT Trigger: GGTGCCTGGGACAGATCCCAACTTTGAGGTCTTCCC...GGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACTCCAGCCGGGTAGGCTaGGTGCTTACAGCAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSQVSFIPESFLLLDVPHSSRVG*VLTAKD Trigger: GTCCTTTGCTGTAAGCACCAAGCCTACCCGGCTGGA...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | CCAGAGAACGCTCAGCTGAGAACGCAATCTGGAACTTGTCAGCTGTaGTTCTCTGGAAGGATTGCATTTCCTTCAAGAAAGCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PENAQLRTQSGTCQL*FSGRIAFPSRKPPP Trigger: GGGAGGAGGCTTTCTTGAAGGAAATGCAATCCTTCCAGAGAAGCACAGCTGACAAGTTCCAGATTGCGTTCTCAGCTGAGCGTTCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 90 bp | CGCTCAGCTGAGAACGCAATCTGGAACTTGTCAGCTGTGCTTCTCTaGAAGGATTGCATTTCCTTCAAGAAAGCCTCCTCCCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSAENAIWNLSAVLL*KDCISFKKASSQSL Trigger: CAAGCTCTGGGAGGAGGCTTTCTTGAAGGAAATGCAATCCTTCCAGAGAAGCACAGCTGACAAGTTCCAGATTGCGTTCTCAGCTGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACTCACCCTGGGACTCATaGCAGGGTGTGATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQVSFIPESFLLLDVPHSPWDS*QGVIFP Trigger: TGGGAAGATCACACCCTGCAATGAGTCCCAGGGTGA...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CACATGGCTAATTACCTGTGCTCAGGTACCACTGCCACACGTTCCCAAGTGTCCAACTTTTGGTCACTTTaGGGCAGAGAGCTGCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HMANYLCSGTTATRSQVSNFWSL*GRELLA Trigger: TGCTAGCAGCTCTCTGCCCAAAAGTGACCAAAAGTT...GGACACTTGGGAACGTGTGGCAGTGGTACCTGAGCACAGGTAATTAGCCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 90 bp | GCTGCAGGTATTATGACAGTGTATGCTCACAAAATTTTCAGAGCATaGCGGGCAGCGTGTAAGGAGGGCCTTGGTGATAGACAGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: AAGIMTVYAHKIFRA*RAACKEGLGDRQAT Trigger: AGTAGCCTGTCTATCACCAAGGCCCTCCTTACACGCTGCCCGGCATGCTCTGAAAATTTTGTGAGCATACACTGTCATAATACCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | GAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGCCATAGGAGTTCAGCTGTGATGTaGGCTGCTAGCAACCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESFLLLDVPHPISCLSHRSSAVM*AASNRD Trigger: ATCCCGGTTGCTAGCAGCCAACATCACAGCTGAACT...CCTATGGCTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | CGAGTAACATTGATGAAGAGGCTCTGGTCAGGGCTGCAGGTATTATaGCAGTGTATGCTCACAAAATTTTCAGAGCATGCCGGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RVTLMKRLWSGLQVL*QCMLTKFSEHAGQR Trigger: ACGCTGCCCGGCATGCTCTGAAAATTTTGTGAGCATACACTGTCATAATACCTGCAGCCCTGACCAGAGCCTCTTCATCAATGTTACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 90 bp | CAGTTCCACAGGGTCTGTGGTGAGTTCTATAAAGGTCAGGCCTACTaGCAAGGCTATCACAACTATGAAGGACAGTGCCAAGACAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QFHRVCGEFYKGQAY*QGYHNYEGQCQDSE Trigger: CTCACTGTCTTGGCACTGTCCTTCATAGTTGTGATAGCCTTGTCAGTAGGCCTGACCTTTATAGAACTCACCACAGACCCTGTGGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACACCACGCGAGTAACATaGATGAAGAGGCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQVSFIPESFLLLDVPHTTRVT*MKRLWS Trigger: TGACCAGAGCCTCTTCATCAATGTTACTCGCGTGGT...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTTGGGAGCCTGCTGTCTaGTTCTTGTTCCTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQVSFIPESFLLLDVPHPWEPAV*FLFLLE Trigger: TTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCA...AGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTAGGGCTGTGCCATCTTaGTACGTGAGAGGGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: QVSFIPESFLLLDVPHPIRAVPS*YVRGAL Trigger: CAATGCCCCTCTCACGTACAAAGATGGCACAGCCCT...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTATGATGGAGAGCAGGTaGAGGATGCCTGAGCGTATG | + |
|
Preference number: 5 (lower is better) Translates to: QVSFIPESFLLLDVPHPIMMESR*RMPERM Trigger: CATACGCTCAGGCATCCTCAACCTGCTCTCCATCAT...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTACTGCCGTGACAAGGTaGATGAGGGACACAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KCPLSQNPFFSWMFHTLFTAVTR*MRDTAL Trigger: CAATGCTGTGTCCCTCATCAACCTTGTCACGGCAGT...AAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGAAGGTGATCAGGAGGTaGAGGCGGAAGAAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: YPRILSSPGCSTPYFLPKKVIRR*RRKKKI Trigger: GATTTTCTTCTTCCGCCTCAACCTCCTGATCACCTT...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | TATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCCTAAGGTTGTTCTGGAAGTATaGAAGGAGGCTGTTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: YPRILSSPGCSTPYFLPKVVLEV*KEAVDT Trigger: TGTGTCAACAGCCTCCTTCAATACTTCCAGAACAAC...CTTAGGCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTCAGGAAAGGTACCACTaGAATGATGACCAGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVSFIPESFLLLDVPHPIQERYH*NDDQRG Trigger: TCCTCTCTGGTCATCATTCAAGTGGTACCTTTCCTG...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCGGTTCATGCAGTTTTaGAGACAGTTGAAGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSQVSFIPESFLLLDVPHRFMQF*RQLKEV Trigger: TACTTCCTTCAACTGTCTCAAAAACTGCATGAACCG...GTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTGGGAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCAAGGGAGTGTATATCTaGCGGAAGAAGCAAAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFIPESFLLLDVPHPISCKGVYI*RKKQSK Trigger: CTTACTTTGCTTCTTCCGCAAGATATACACTCCCTT...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTTCCTGCACATTAAGTAGAGGTTaGCTCCAAACAGGACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFIPESFLLLDVPHPISCTLSRG*LQTGPE Trigger: TTCTGGTCCTGTTTGGAGCAAACCTCTACTTAATGT...GCAGGAAATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGCCATTCAGAGTCTGGTaGGCTGTGAGCAGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICIYINLHFATWLITCAQPFRVW*AVSSRS Trigger: ACTCCTGCTGCTCACAGCCAACCAGACTCTGAATGG...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCTTTATCCCAGAATCCTTTCTTCTCCTGGATGTTCCACACCCTATTCAGTTTTTGAGACAGTaGAAGGAAGTATCCGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVSFIPESFLLLDVPHPIQFLRQ*KEVSVE Trigger: CTCAACGGATACTTCCTTCAACTGTCTCAAAAACTG...AATAGGGTGTGGAACATCCAGGAGAAGAAAGGATTCTGGGATAAAGGACACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS-3UTR CAA 90 bp | ATATGCATTTATATTAATCTACATTTCGCCACATGGCTAATTACCTGTGCTCAGGTCACAAAAATCTGGTaGGTTCGGAAGAAGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ICIYINLHFATWLITCAQVTKIW*VRKKGP Trigger: TGGCCCCTTCTTCCGAACCAACCAGATTTTTGTGAC...CTGAGCACAGGTAATTAGCCATGTGGCGAAATGTAGATTAATATAAATGCATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | GCGCAGGGCCGGGGGCGGAGGGATGACAGGGCAGGATaGTGCACAGTCCTGGCAGGAACAGGCTGCCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: AQGRGRRDDRAG*CTVLAGTGCRV Trigger: GACTCGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTCATCCCTCCGCCCCCGGCCCTGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | ATGCTGGGGGCCACACTACCCAGGGTGCGGCCAATGTaGGCCTCTCGCTGCTCCCCGGGCATCCTAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MLGATLPRVRPM*ASRCSPGILGS Trigger: GCTGCCTAGGATGCCCGGGGAGCAGCGAGAGGCTCACATTGGCCGCACCCTGGGTAGTGTGGCCCCCAGCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | TGTAGAAAGAAGGGCGCAGGGCCGGGGGCGGAGGGATaGCAGGGCAGGATGCTGCACAGTCCTGGCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CRKKGAGPGAEG*QGRMLHSPGRN Trigger: GTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTCATCCCTCCGCCCCCGGCCCTGCGCCCTTCTTTCTACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | GGCGGAGGGATGACAGGGCAGGATGCTGCACAGTCCTaGCAGGAACAGGCTGCCGAGTCTTCACCCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GGGMTGQDAAQS*QEQAAESSPWD Trigger: GTCCCAGGGTGAAGACTCGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATCCTGCCCTGTCATCCCTCCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | GAGAGGAGGGGACACCCAGGTAGGAGTAGAAGCCCATaGCAGCCACGACTGCTCCCAGCACAACAGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: ERRGHPGRSRSP*QPRLLPAQQPP Trigger: GGGTGGCTGTTGTGCTGGGAGCAGTCGTGGCTGCCATGGGCTTCTACTCCTACCTGGGTGTCCCCTCCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | AGAAGCAGATGGCCTCAGAGAGGCTGCACAGCAGCATaGTGGGGGCCACACTACCCAGGGTGCGGCCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRWPQRGCTAA*WGPHYPGCGQC Trigger: ACATTGGCCGCACCCTGGGTAGTGTGGCCCCCAGCATGCTGCTGTGCAGCCTCTCTGAGGCCATCTGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | GAAAAGCAGCACACGACGTCGGGGCGAGAGGCCTCCTaGCTCTTGCTATCCAGGGAGAGCAGGGCCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EKQHTTSGREAS*LLLSRESRATK Trigger: CTTTGTGGCCCTGCTCTCCCTGGATAGCAAGAGGCAGGAGGCCTCTCGCCCCGACGTCGTGTGCTGCTTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | CTTGAAAAGCAGCACACGACGTCGGGGCGAGAGGCCTCCTGCCTCTaGCTATCCAGGGAGAGCAGGGCCACAAAGGCTGTCATCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LEKQHTTSGREASCL*LSRESRATKAVIWS Trigger: GCTCCAGATGACAGCCTTTGTGGCCCTGCTCTCCCTGGATAGCAAGAGGCAGGAGGCCTCTCGCCCCGACGTCGTGTGCTGCTTTTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | AGGGCAGGATGCTGCACAGTCCTGGCAGGAACAGGCTaGCGAGTCTTCACCCTGGGACTCATTGCAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RAGCCTVLAGTG*RVFTLGLIAGC Trigger: ACACCCTGCAATGAGTCCCAGGGTGAAGACTCGGCAGCCTGTTCCTGCCAGGACTGTGCAGCATCCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | CGAAGAACCGGCCAAGGACAGTGTGAGGTGAGAATCTaGGCTTACGAGGGAGGTTGGGGGCTTCCTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTGQGQCEVRI*AYEGGWGLPGS Trigger: GCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGCGCAGATTCTCACCTCACACTGTCCTTGGCCGGTTCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | TATAGGCGGGGACAGACGCGCTGGAGAAGAGCCAGGTaGTCACCTGTGACATGGCGGGCTGGGGTATTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: YRRGQTRWRRAR*SPVTWRAGVLD Trigger: GTCTAATACCCCAGCCCGCCATGTCACAGGTGACCACCTGGCTCTTCTCCAGCGCGTCTGTCCCCGCCTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | TTCCCATCCAGTGGCTTCATCCCATCTGCCAGGGCCTaGCCAGGCTCCAAGAGGTGGAAGGTGATGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPSSGFIPSARA*PGSKRWKVMSS Trigger: GCTGGACATCACCTTCCACCTCTTGGAGCCTGGCCAGGCCCTGGCAGATGGGATGAAGCCACTGGATGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | CTGGGACTCATTGCAGGGTGTGATCTTCCCATCCAGTaGCTTCATCCCATCTGCCAGGGCCTGGCCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLIAGCDLPIQ*LHPICQGLARL Trigger: GAGCCTGGCCAGGCCCTGGCAGATGGGATGAAGCCACTGGATGGGAAGATCACACCCTGCAATGAGTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | GATGTCCAGCGGAGCCAGGCCATTCCCTGTGTCTCCTaGGAAGTTGAGCCAGCGCTGAGCATTGCAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DVQRSQAIPCVS*EVEPALSIAEG Trigger: GCCCTCTGCAATGCTCAGCGCTGGCTCAACTTCCAAGGAGACACAGGGAATGGCCTGGCTCCGCTGGACATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | TGGGATCTGTCCCAGGCACCTTCCGTAGTTCAGCTGTaGTGTTGGCTGCTAGCAACCGGGATGCCCGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WDLSQAPSVVQL*CWLLATGMPGE Trigger: CTCTCCGGGCATCCCGGTTGCTAGCAGCCAACATCACAGCTGAACTACGGAAGGTGCCTGGGACAGATCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | GCGCTTACGAGGGAGGTTGGGGGCTTCCTGGGAGCCTaGTGTCTTGTTCTTGTTCCTGTTGGAAGCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALTREVGGFLGA*CLVLVPVGSHS Trigger: CGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | CAGTCCTGGCAGGAACAGGCTGCCGAGTCTTCACCCTaGGACTCATTGCAGGGTGTGATCTTCCCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSWQEQAAESSP*DSLQGVIFPSS Trigger: ACTGGATGGGAAGATCACACCCTGCAATGAGTCCCAGGGTGAAGACTCGGCAGCCTGTTCCTGCCAGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | CAGTCCACCAGGGAGGTCTGGCCATTCAGAGTCTGGTaGGCTGTGAGCAGCAGGAGTGTGTGGTTGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QSTREVWPFRVW*AVSSRSVWLFW Trigger: CCAGAACAACCACACACTCCTGCTGCTCACAGCCAACCAGACTCTGAATGGCCAGACCTCCCTGGTGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | TCTGTCCCAGGCACCTTCCGTAGTTCAGCTGTGATGTaGGCTGCTAGCAACCGGGATGCCCGGAGAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVPGTFRSSAVM*AASNRDARRAS Trigger: AGAAGCTCTCCGGGCATCCCGGTTGCTAGCAGCCAACATCACAGCTGAACTACGGAAGGTGCCTGGGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | GCGCACCCGGCTACAGGACTCATAGGCCTTCTCTGCAAAACTGCGTaGATAAAAGGCCTCATAGGCCACCACAGCAGGAAGCTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AHPATGLIGLLCKTA*IKGLIGHHSRKLSR Trigger: CCTGGACAGCTTCCTGCTGTGGTGGCCTATGAGGCCTTTTATCAACGCAGTTTTGCAGAGAAGGCCTATGAGTCCTGTAGCCGGGTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | CTGCGCTTACGAGGGAGGTTGGGGGCTTCCTGGGAGCCTGCTGTCTaGTTCTTGTTCCTGTTGGAAGCCACTCGGAGATACACAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LRLRGRLGASWEPAV*FLFLLEATRRYTRT Trigger: TGTCCTTGTGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAAGCGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | TGCAGCTCAGGGCCAGGGCTGTGCCATCTTTGTACGTaGGAGGGGCATTGGCACAGTAGAGGAAATGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSGPGLCHLCT*EGHWHSRGNGP Trigger: AGGACCATTTCCTCTACTGTGCCAATGCCCCTCTCACGTACAAAGATGGCACAGCCCTGGCCCTGAGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | GGCGTTCATGCCTGCCTCGGTGGAAAAGTTGTAGCCTaGGGTGGTGTCAAAGTACACTGGAGGCCCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GVHACLGGKVVA*GGVKVHWRPHF Trigger: GAAGTGGGGCCTCCAGTGTACTTTGACACCACCTCAGGCTACAACTTTTCCACCGAGGCAGGCATGAACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | AGGGAGATGTTGCGCTGTGCCTCATGGGACCACACTTaGAGGTGTCGAAGTCTCTCCTGTAGCTCCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: REMLRCASWDHT*RCRSLSCSSNS Trigger: GCTGTTGGAGCTACAGGAGAGACTTCGACACCTGCAAGTGTGGTCCCATGAGGCACAGCGCAACATCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | ACGCGCTGGAGAAGAGCCAGGTGGTCACCTGTGACATaGCGGGCTGGGGTATTAGACAAGCAGGAGATATTG | + |
|
Preference number: 6 (lower is better) Translates to: TRWRRARWSPVT*RAGVLDKQEIL Trigger: CAATATCTCCTGCTTGTCTAATACCCCAGCCCGCCATGTCACAGGTGACCACCTGGCTCTTCTCCAGCGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | TTCCAGTCCACCAGGGAGGTCTGGCCATTCAGAGTCTaGTTGGCTGTGAGCAGCAGGAGTGTGTGGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FQSTREVWPFRV*LAVSSRSVWLF Trigger: GAACAACCACACACTCCTGCTGCTCACAGCCAACCAGACTCTGAATGGCCAGACCTCCCTGGTGGACTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | GTAGGCTTGGTGCTTACAGCAAAGGACCGGGTAATGTaGGACACGAACTCCACAGACATGCCCACTGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGLVLTAKDRVM*DTNSTDMPTAV Trigger: CACGGCAGTGGGCATGTCTGTGGAGTTCGTGTCCCACATTACCCGGTCCTTTGCTGTAAGCACCAAGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | GTCAGCTCCCACAGCCAGCACCAGGAAAGGTACCACTaGAATGATGACCAGAGAGGAGGGGACACCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSSHSQHQERYH*NDDQRGGDTQV Trigger: TACCTGGGTGTCCCCTCCTCTCTGGTCATCATTCAAGTGGTACCTTTCCTGGTGCTGGCTGTGGGAGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | GCCACTCCAGCAAACACCGCACTGCCCATGAAGATAGTAGCATCTTaGGCTCTCTCCAGCCGGGTAGGCTTGGTGCTTACAGCAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ATPANTALPMKIVAS*ALSSRVGLVLTAKD Trigger: GTCCTTTGCTGTAAGCACCAAGCCTACCCGGCTGGAGAGAGCCAAAGATGCTACTATCTTCATGGGCAGTGCGGTGTTTGCTGGAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | GCCTCTCGCTGCTCCCCGGGCATCCTAGGCAGCCTCTaGTACTCAAGAACAAAGATGAAGATGTTGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASRCSPGILGSL*YSRTKMKMLSA Trigger: AGCTGACAACATCTTCATCTTTGTTCTTGAGTACCAGAGGCTGCCTAGGATGCCCGGGGAGCAGCGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | AGGTTGGGGGCTTCCTGGGAGCCTGCTGTCTTGTTCTaGTTCCTGTTGGAAGCCACTCGGAGATACACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGASWEPAVLF*FLLEATRRYTR Trigger: CCTTGTGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | TTACGAGGGAGGTTGGGGGCTTCCTGGGAGCCTGCTGTCTTGTTCTaGTTCCTGTTGGAAGCCACTCGGAGATACACAAGGACAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRGRLGASWEPAVLF*FLLEATRRYTRTTE Trigger: CTCTGTTGTCCTTGTGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCTCCCTCGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | CCCATGAAGATAGTAGCATCTTTGGCTCTCTCCAGCCGGGTAGGCTaGGTGCTTACAGCAAAGGACCGGGTAATGTGGGACACGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PMKIVASLALSSRVG*VLTAKDRVMWDTNS Trigger: GGAGTTCGTGTCCCACATTACCCGGTCCTTTGCTGTAAGCACCAAGCCTACCCGGCTGGAGAGAGCCAAAGATGCTACTATCTTCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | TTGAGGCGGAAGAAGAAAATCTGGATAAGCTGGGCCTaGGCAAAGCCCAGGATGAGGATGCCCGGGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRRKKKIWISWA*AKPRMRMPGKL Trigger: CAACTTCCCGGGCATCCTCATCCTGGGCTTTGCTCAGGCCCAGCTTATCCAGATTTTCTTCTTCCGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | CCCGGCTACAGGACTCATAGGCCTTCTCTGCAAAACTaGGTTGATAAAAGGCCTCATAGGCCACCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGYRTHRPSLQN*VDKRPHRPPQQ Trigger: CTGCTGTGGTGGCCTATGAGGCCTTTTATCAACGCAGTTTTGCAGAGAAGGCCTATGAGTCCTGTAGCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | AGGTGTCGAAGTCTCTCCTGTAGCTCCAACAGCTCCTaGAGCAAGTCCAGGGATAGGATCCCACTGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RCRSLSCSSNSS*SKSRDRIPLKF Trigger: GAACTTCAGTGGGATCCTATCCCTGGACTTGCTGCAGGAGCTGTTGGAGCTACAGGAGAGACTTCGACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | TCATGCCTGCCTCGGTGGAAAAGTTGTAGCCTGAGGTaGTGTCAAAGTACACTGGAGGCCCCACTTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCLPRWKSCSLR*CQSTLEAPLPS Trigger: ACTTGGAAGTGGGGCCTCCAGTGTACTTTGACACCACCTCAGGCTACAACTTTTCCACCGAGGCAGGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | TTTTCAGAGCATGCCGGGCAGCGTGTAAGGAGGGCCTaGGTGATAGACAGGCTACTGTCTAATGACACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSEHAGQRVRRA*VIDRLLSNDTS Trigger: GCTGGTGTCATTAGACAGTAGCCTGTCTATCACCAAGGCCCTCCTTACACGCTGCCCGGCATGCTCTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | TCAGGAACCAGGGCAGGTACTTATGAAACTGTTCTGTaGTGGGTCTCACGGGACCCAGAGTGCGGTTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SGTRAGTYETVL*WVSRDPECGSC Trigger: GCATGAACCGCACTCTGGGTCCCGTGAGACCCACAACAGAACAGTTTCATAAGTACCTGCCCTGGTTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | ATGGTGTCCACGAGGATCATAATGATGGAGAGCAGGTaGAGGATGCCTGAGCGTATGTCCAGGCCCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: MVSTRIIMMESR*RMPERMSRPSR Trigger: CCTACTGGGCCTGGACATACGCTCAGGCATCCTCAACCTGCTCTCCATCATTATGATCCTCGTGGACACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | ATAGTAGCATCTTTGGCTCTCTCCAGCCGGGTAGGCTaGGTGCTTACAGCAAAGGACCGGGTAATGTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: IVASLALSSRVG*VLTAKDRVMWD Trigger: GTCCCACATTACCCGGTCCTTTGCTGTAAGCACCAAGCCTACCCGGCTGGAGAGAGCCAAAGATGCTACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | GCAAACACCGCACTGCCCATGAAGATAGTAGCATCTTaGGCTCTCTCCAGCCGGGTAGGCTTGGTGCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: ANTALPMKIVAS*ALSSRVGLVLT Trigger: TGTAAGCACCAAGCCTACCCGGCTGGAGAGAGCCAAAGATGCTACTATCTTCATGGGCAGTGCGGTGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | GTGAGCAGCAGGAGTGTGTGGTTGTTCTGGAAGTATTaGAGGAGGCTGTTGACACAGCAGTCAGTGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSRSVWLFWKY*RRLLTQQSVRL Trigger: CAGCCTCACTGACTGCTGTGTCAACAGCCTCCTTCAATACTTCCAGAACAACCACACACTCCTGCTGCTCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | TCGTCCTCCAGAGAACGCTCAGCTGAGAACGCAATCTaGAACTTGTCAGCTGTGCTTCTCTGGAAGGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRERSAENAI*NLSAVLLWKDC Trigger: GCAATCCTTCCAGAGAAGCACAGCTGACAAGTTCCAGATTGCGTTCTCAGCTGAGCGTTCTCTGGAGGACGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | GCTTCCTGGGAGCCTGCTGTCTTGTTCTTGTTCCTGTaGGAAGCCACTCGGAGATACACAAGGACAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASWEPAVLFLFL*EATRRYTRTTE Trigger: CTCTGTTGTCCTTGTGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | GGTCTCACGGGACCCAGAGTGCGGTTCATGCAGTTTTaGAGACAGTTGAAGGAAGTATCCGTTGAGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GLTGPRVRFMQF*RQLKEVSVEGQ Trigger: CTGTCCCTCAACGGATACTTCCTTCAACTGTCTCAAAAACTGCATGAACCGCACTCTGGGTCCCGTGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | AGGTTGGGGGCTTCCTGGGAGCCTGCTGTCTTGTTCTTGTTCCTGTaGGAAGCCACTCGGAGATACACAAGGACAACAGAGAGCAATACA | + |
|
Preference number: 6 (lower is better) Translates to: RLGASWEPAVLFLFL*EATRRYTRTTESNT Trigger: TGTATTGCTCTCTGTTGTCCTTGTGTATCTCCGAGTGGCTTCCAACAGGAACAAGAACAAGACAGCAGGCTCCCAGGAAGCCCCCAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | CTGGTTGGCTGTGAGCAGCAGGAGTGTGTGGTTGTTCTGGAAGTATaGAAGGAGGCTGTTGACACAGCAGTCAGTGAGGCTGGTGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LVGCEQQECVVVLEV*KEAVDTAVSEAGVM Trigger: CATAACACCAGCCTCACTGACTGCTGTGTCAACAGCCTCCTTCAATACTTCCAGAACAACCACACACTCCTGCTGCTCACAGCCAACCAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | CTCACAAAATTTTCAGAGCATGCCGGGCAGCGTGTAAGGAGGGCCTaGGTGATAGACAGGCTACTGTCTAATGACACCAGCTGCTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LTKFSEHAGQRVRRA*VIDRLLSNDTSCLV Trigger: TACCAAGCAGCTGGTGTCATTAGACAGTAGCCTGTCTATCACCAAGGCCCTCCTTACACGCTGCCCGGCATGCTCTGAAAATTTTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | GGTCTCACGGGACCCAGAGTGCGGTTCATGCAGTTTTTGAGACAGTaGAAGGAAGTATCCGTTGAGGGACAGAACTCATCTTTATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLTGPRVRFMQFLRQ*KEVSVEGQNSSLWG Trigger: CCCCCATAAAGATGAGTTCTGTCCCTCAACGGATACTTCCTTCAACTGTCTCAAAAACTGCATGAACCGCACTCTGGGTCCCGTGAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | AGTGCGATTGATCTCGTCCTCCAGAGAACGCTCAGCTaGGAACGCAATCTGGAACTTGTCAGCTGTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SAIDLVLQRTLS*ERNLELVSCAS Trigger: AGAAGCACAGCTGACAAGTTCCAGATTGCGTTCTCAGCTGAGCGTTCTCTGGAGGACGAGATCAATCGCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | TTGGGCGTATCATTCAGGAACCAGGGCAGGTACTTATaGAACTGTTCTGTTGTGGGTCTCACGGGACCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGVSFRNQGRYL*NCSVVGLTGPR Trigger: TCTGGGTCCCGTGAGACCCACAACAGAACAGTTTCATAAGTACCTGCCCTGGTTCCTGAATGATACGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | GTAGTTATTGATAGAGAAGGTTATGATCAGGGCTTCTaGCTCCGAGTAGTCCGTCCCTTGGTAGCCCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VVIDREGYDQGF*LRVVRPLVAPN Trigger: GTTGGGGGCTACCAAGGGACGGACTACTCGGAGGCAGAAGCCCTGATCATAACCTTCTCTATCAATAACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | AGAAAGAGCAGCAGCACAACAGGGCGGATGAATCTGTaGAGCAGGAAGGGAGTGTATATCTTGCGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RKSSSTTGRMNL*SRKGVYILRKK Trigger: CTTCTTCCGCAAGATATACACTCCCTTCCTGCTGCACAGATTCATCCGCCCTGTTGTGCTGCTGCTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | ACACATTGGAGATCGTGTAAGGGAAGACCTCAAAGTTaGGATCTGTCCCAGGCACCTTCCGTAGTTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: THWRSCKGRPQS*DLSQAPSVVQL Trigger: CAGCTGAACTACGGAAGGTGCCTGGGACAGATCCCAACTTTGAGGTCTTCCCTTACACGATCTCCAATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | TGTGAGCAGCAGGAGTGTGTGGTTGTTCTGGAAGTATaGAAGGAGGCTGTTGACACAGCAGTCAGTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CEQQECVVVLEV*KEAVDTAVSEA Trigger: AGCCTCACTGACTGCTGTGTCAACAGCCTCCTTCAATACTTCCAGAACAACCACACACTCCTGCTGCTCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | CTATACGCTGCTAGGCCCCCTTTAGGACATCTGATGTaGGGCGTATCATTCAGGAACCAGGGCAGGTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: LYAARPPLGHLM*GVSFRNQGRYL Trigger: TAAGTACCTGCCCTGGTTCCTGAATGATACGCCCAACATCAGATGTCCTAAAGGGGGCCTAGCAGCGTATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | TCTGTTGTGGGTCTCACGGGACCCAGAGTGCGGTTCATGCAGTTTTaGAGACAGTTGAAGGAAGTATCCGTTGAGGGACAGAACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SVVGLTGPRVRFMQF*RQLKEVSVEGQNSS Trigger: AGATGAGTTCTGTCCCTCAACGGATACTTCCTTCAACTGTCTCAAAAACTGCATGAACCGCACTCTGGGTCCCGTGAGACCCACAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS GCA 72 bp | TGGATTAAAGCCGTAGTTAACATAGTCACTGGTGTTTaGATCAGCCGGGAAGGGGTACTGTGGGCAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WIKAVVNIVTGV*ISREGVLWARR Trigger: CCTTCTTGCCCACAGTACCCCTTCCCGGCTGATGCAAACACCAGTGACTATGTTAACTACGGCTTTAATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | ACAACAGGGCGGATGAATCTGTGCAGCAGGAAGGGAGTGTATATCTaGCGGAAGAAGCAAAGTAAGAGGCCTTCTTTTTGTTTCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TTGRMNLCSRKGVYI*RKKQSKRPSFCFGG Trigger: CCCACCGAAACAAAAAGAAGGCCTCTTACTTTGCTTCTTCCGCAAGATATACACTCCCTTCCTGCTGCACAGATTCATCCGCCCTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | GCAGAGAGCAAGAGTGAAGATTCCCTCAGGGAGAACCGTCAGGTATaGCTGGTAGAACACATTGGAGATCGTGTAAGGGAAGACCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AESKSEDSLRENRQV*LVEHIGDRVREDLK Trigger: TTTGAGGTCTTCCCTTACACGATCTCCAATGTGTTCTACCAGCAATACCTGACGGTTCTCCCTGAGGGAATCTTCACTCTTGCTCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | GGACCCAGAGTGCGGTTCATGCAGTTTTTGAGACAGTaGAAGGAAGTATCCGTTGAGGGACAGAACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRVRFMQFLRQ*KEVSVEGQNSS Trigger: AGATGAGTTCTGTCCCTCAACGGATACTTCCTTCAACTGTCTCAAAAACTGCATGAACCGCACTCTGGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 90 bp | ATCTCGTCCTCCAGAGAACGCTCAGCTGAGAACGCAATCTGGAACTaGTCAGCTGTGCTTCTCTGGAAGGATTGCATTTCCTTCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISSSRERSAENAIWN*SAVLLWKDCISFKK Trigger: TTTCTTGAAGGAAATGCAATCCTTCCAGAGAAGCACAGCTGACAAGTTCCAGATTGCGTTCTCAGCTGAGCGTTCTCTGGAGGACGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | AGGGTCTGTGGTGAGTTCTATAAAGGTCAGGCCTACTaGCAAGGCTATCACAACTATGAAGGACAGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RVCGEFYKGQAY*QGYHNYEGQCQ Trigger: TTGGCACTGTCCTTCATAGTTGTGATAGCCTTGTCAGTAGGCCTGACCTTTATAGAACTCACCACAGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | AATCTGGAACTTGTCAGCTGTGCTTCTCTGGAAGGATaGCATTTCCTTCAAGAAAGCCTCCTCCCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NLELVSCASLEG*HFLQESLLPEL Trigger: AAGCTCTGGGAGGAGGCTTTCTTGAAGGAAATGCAATCCTTCCAGAGAAGCACAGCTGACAAGTTCCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CAA 72 bp | AAGAGTGAAGATTCCCTCAGGGAGAACCGTCAGGTATaGCTGGTAGAACACATTGGAGATCGTGTAAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KSEDSLRENRQV*LVEHIGDRVRE Trigger: TTCCCTTACACGATCTCCAATGTGTTCTACCAGCAATACCTGACGGTTCTCCCTGAGGGAATCTTCACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS TCA 72 bp | TTGATGAAGAGGCTCTGGTCAGGGCTGCAGGTATTATaGCAGTGTATGCTCACAAAATTTTCAGAGCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LMKRLWSGLQVL*QCMLTKFSEHA Trigger: GGCATGCTCTGAAAATTTTGTGAGCATACACTGTCATAATACCTGCAGCCCTGACCAGAGCCTCTTCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||
| CDS CCA 72 bp | AGAGCTGCTAGCAGCATTAATTTCAGGGATAAATTCTaGATTAAAGCCGTAGTTAACATAGTCACTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RAASSINFRDKF*IKAVVNIVTGV Trigger: AACACCAGTGACTATGTTAACTACGGCTTTAATCCAGAATTTATCCCTGAAATTAATGCTGCTAGCAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004505.3 |
||