Pregenerated sensors for NPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024413Ensembl transcript IDs: ENSMUST00000025279.6
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGATAGAGGAACAGCCAAGAACCTCTGGTGTTCCTGTCGGCCCTaGTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCT | + |
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Preference number: 1 (lower is better) Translates to: ADRGTAKNLWCSCRP*SLLLRPGCSYPNTA Trigger: AGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGACCAGGGCCGACAGGAACACCAGAGGTTCTTGGCTGTTCCTCTATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR GCA 90 bp | CGGACACAGCCTGAAGCCAGCTCAGTCTTGACAGCGCAGCTGTCTTaGAGTAAACTTGACCTATCCATAAACACAGTCACCAAAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RTQPEASSVLTAQLS*SKLDLSINTVTKAC Trigger: GCAGGCTTTGGTGACTGTGTTTATGGATAGGTCAAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 90 bp | TGCGAGTGGGTCGAGCTGCCACTGCTGACCCGTGAACTGAATTGCTaGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTT | + |
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Preference number: 1 (lower is better) Translates to: CEWVELPLLTRELNC*FPDNADRICSKEPF Trigger: AAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTCACGGGTCAGCAGTGGCAGCTCGACCCACTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 90 bp | AATACTGCTTCACAAGTTAGGTGTGCATTCCTGAGTTTAAAAGCGTaGGTAGAGCTGCATGTGACACAGCTCGGACACAGCCTGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: NTASQVRCAFLSLKA*VELHVTQLGHSLKP Trigger: TGGCTTCAGGCTGTGTCCGAGCTGTGTCACATGCAGCTCTACCCACGCTTTTAAACTCAGGAATGCACACCTAACTTGTGAAGCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CCA 90 bp | CTGATAGAGGAACAGCCAAGAACCTCTGGTGTTCCTGTCGGCCCTGGTCCCTCCCCCACTATCTCTGGTTaGTGGTGGGCTAGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LIEEQPRTSGVPVGPGPSPTISG*WWARRE Trigger: CTCCCTTCTAGCCCACCACCAACCAGAGATAGTGGG...GGAGGGACCAGGGCCGACAGGAACACCAGAGGTTCTTGGCTGTTCCTCTATCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CAA 90 bp | GCTGCATGTGACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTaGACAGCGCAGCTGTCTTGCAGTAAACTTGACCTATCCATAAAC | + |
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Preference number: 2 (lower is better) Translates to: AACDTARTQPEASSV*TAQLSCSKLDLSIN Trigger: GTTTATGGATAGGTCAAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGTCACATGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGTTGAGCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGACAGCCAAGAACCTCTaGTGTTCCTGTCGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VVELHVLGLHRENIELAVTAKNL*CSCRPW Trigger: CCAGGGCCGACAGGAACACCAGAGGTTCTTGGCTGT...CACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CCA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGCCTCCTGCTGAGGCCTaGCTGCTCCTATCCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: EYRASCVMFVGLQSSLIEPPAEA*LLLSQH Trigger: GTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGG...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGAAGCCAGCTCAGTCTTaGCAGCGCAGCTGTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LKKNKLKPMSVVCILSSRKPAQS*QRSCLA Trigger: TGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR TCA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTAGCTCGGACACAGCCTaGAGCCAGCTCAGTCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: LKQVKVTELSFLVPKMRFSSDTA*SQLSLD Trigger: GTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCT...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CAA 90 bp | AAAGAAAAGGAGACAGCATGTGGGGTAGGGATCAGGTCACAGTTATaGCCACTGGGAAATGGAAACTTAAGGGTTCTTTGGAAAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KEKETACGVGIRSQL*PLGNGNLRVLWKVS Trigger: ACTGACTTTCCAAAGAACCCTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACATGCTGTCTCCTTTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR GCA 90 bp | CATTTTGCTGAAGCAGACACAGGTGAAAGGCAGACTTGTGAAGGACTGTTTCCCAATGCAGACAGGATCTaGTCCAAAGAACCATTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HFAEADTGERQTCEGLFPNADRI*SKEPFL Trigger: TAGAAATGGTTCTTTGGAGCAGATCCTGTCTGCATT...GGGAAACAGTCCTTCACAAGTCTGCCTTTCACCTGTGTCTGCTTCAGCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGCAGGCATGTATTGGTTaGTCTGCCTTATATTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: MWGRDQVTVIATGKWKLKQACIG*SALYCV Trigger: TACACAATATAAGGCAGACCAACCAATACATGCCTG...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR GCA 90 bp | TATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGGAAACCCGTGAACTGAATTaGTGGTTTCCTGATAATGCA | + |
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Preference number: 2 (lower is better) Translates to: YRASCVMFVGLQSSLIEETRELN*WFPDNA Trigger: TGCATTATCAGGAAACCAGCAATTCAGTTCACGGGT...TTCCTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGCGTGAACTGAATTGCTaGTTTCCTGATAATGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LKKNKLKPMSVVCILSSRRELNC*FPDNAD Trigger: GTCTGCATTATCAGGAAACCAGCAATTCAGTTCACG...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGAACTTAAGGGTTCTTTaGAAAGTCAGTTGTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LKKNKLKPMSVVCILSSRNLRVL*KVSCVR Trigger: TCTAACACAACTGACTTTCCAAAGAACCCTTAAGTT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR GCA 72 bp | CCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTaGTGGTGTATCCGTGAAGTGTTTGCGAGTGGGTCG | + |
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Preference number: 3 (lower is better) Translates to: PPAEAWLLLSQH*WCIREVFASGS Trigger: CGACCCACTCGCAAACACTTCACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | CCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTaGTGTATCCGTGAAGTGTTTGCGAGTGGGTCGAGC | + |
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Preference number: 3 (lower is better) Translates to: PAEAWLLLSQHC*CIREVFASGSS Trigger: GCTCGACCCACTCGCAAACACTTCACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | CCAGTCTTCGCTGATAGAGGAACAGCCAAGAACCTCTaGTGTTCCTGTCGGCCCTGGTCCCTCCTGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: PVFADRGTAKNL*CSCRPWSLLLR Trigger: CCTCAGCAGGAGGGACCAGGGCCGACAGGAACACCAGAGGTTCTTGGCTGTTCCTCTATCAGCGAAGACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR TCA 72 bp | ACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTTaGCAGCGCAGCTGTCTTGCAGTAAACTTGACCTAT | + |
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Preference number: 3 (lower is better) Translates to: TQLGHSLKPAQS*QRSCLAVNLTY Trigger: ATAGGTCAAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR TCA 72 bp | CTGACTGAGCCGCGTTGTCCTTACAGGAGAGCACTGTaGAGAACACGTTGCCTTTTTCAAGCAGGTTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: LTEPRCPYRRAL*RTRCLFQAGFW Trigger: CCAAAAACCTGCTTGAAAAAGGCAACGTGTTCTTCACAGTGCTCTCCTGTAAGGACAACGCGGCTCAGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | TCACAAGTTAGGTGTGCATTCCTGAGTTTAAAAGCGTaGGTAGAGCTGCATGTGACACAGCTCGGACACAGC | + |
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Preference number: 3 (lower is better) Translates to: SQVRCAFLSLKA*VELHVTQLGHS Trigger: GCTGTGTCCGAGCTGTGTCACATGCAGCTCTACCCACGCTTTTAAACTCAGGAATGCACACCTAACTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | CTTCCCCTGTATCCTTTCTTTCCCACTATCTCTGGTTaGTGGTGGGCTAGAAGGGAGGTTAAAGTGTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: LPLYPFFPTISG*WWARREVKVFN Trigger: ATTAAACACTTTAACCTCCCTTCTAGCCCACCACCAACCAGAGATAGTGGGAAAGAAAGGATACAGGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR-3UTR CAA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGACAGGCATGTATTGGTaGGTCTGCCTTATATTGTGT | + |
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Preference number: 3 (lower is better) Translates to: MWGRDQVTVIATGKWKLKTGMYW*VCLILC Trigger: ACACAATATAAGGCAGACCAACCAATACATGCCTGT...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR TCA 72 bp | GGCATGTATTGGTTGGTCTGCCTTATATTGTGTAGTTaGGCTCCATGTGTTGGGACTCCACAGAGAGAATAT | + |
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Preference number: 3 (lower is better) Translates to: GMYWLVCLILCS*APCVGTPQREY Trigger: ATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTACACAATATAAGGCAGACCAACCAATACATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | GGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATaGAAACTTAAGGGTTCTTTGGAAAGTCAGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GRDQVTVIATGK*KLKGSLESQLC Trigger: ACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR TCA 72 bp | GTTTCCCTAAAGCAAGCACATGAAAGGACACGTGAATaGCAGGCATGTATTGGTTGGTCTGCCTTATATTGT | + |
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Preference number: 3 (lower is better) Translates to: VSLKQAHERTRE*QACIGWSALYC Trigger: ACAATATAAGGCAGACCAACCAATACATGCCTGTCATTCACGTGTCCTTTCATGTGCTTGCTTTAGGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | TTATTGCCACTGGGAAATGGAAACTTAAGGGTTCTTTaGAAAGTCAGTTGTGTTAGATGGGGTTTTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LLPLGNGNLRVL*KVSCVRWGFAG Trigger: CCCAGCAAAACCCCATCTAACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCATTTCCCAGTGGCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CCA 72 bp | AACTTAAGGGTTCTTTGGAAAGTCAGTTGTGTTAGATaGGGTTTTGCTGGGGCAAATGTGAAAGAACATTTT | + |
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Preference number: 3 (lower is better) Translates to: NLRVLWKVSCVR*GFAGANVKEHF Trigger: AAAATGTTCTTTCACATTTGCCCCAGCAAAACCCCATCTAACACAACTGACTTTCCAAAGAACCCTTAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR GCA 90 bp | CTGATAGAGGAACAGCCAAGAACCTCTGGTGTTCCTGTCGGCCCTGGTCCCTCCCCACCAGGAGCCTGCTaGAGCTCTGGATGTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: LIEEQPRTSGVPVGPGPSPPGAC*SSGCDP Trigger: TGGGTCACATCCAGAGCTGCAGCAGGCTCCTGGTGG...GGAGGGACCAGGGCCGACAGGAACACCAGAGGTTCTTGGCTGTTCCTCTATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR TCA 90 bp | AGAGCTGCATGTGACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTTGACACGTCGTCAGCGCCTCTaGCACAGCACAGGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RAACDTARTQPEASSVLTRRQRL*HSTGCP Trigger: TGGACATCCTGTGCTGTGTCAGAGGCGCTGACGACG...TGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGTCACATGCAGCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR GCA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATACCCATGTGGGCCAGTaGCTCTTCCGCCCGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDTHVGQ*LFRPAH Trigger: GTGAGCCGGGCGGAAGAGGCACTGGCCCACATGGGT...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR GCA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTGCCACACAGATGTCCTaGAGTGTCACGGTTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRATQMS*SVTVSL Trigger: CAATGAAACCGTGACACTGCAGGACATCTGTGTGGC...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTGGATTGGTGGTGACCTaGACAAATACCAGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRGLVVT*TNTRPE Trigger: TTCTGGCCTGGTATTTGTCCAGGTCACCACCAATCC...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | AGAGCTGCATGTGACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTTGACAGCAGCAGGACGACTGTaGCGAGACCCAGTCAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: RAACDTARTQPEASSVLTAAGRL*RDPVKV Trigger: TACTTTGACTGGGTCTCGCCACAGTCGTCCTGCTGC...TGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGTCACATGCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | CTGATAGAGGAACAGCCAAGAACCTCTGGTGTTCCTGTCGGCCCTGGTCCCTCCGCCGAGCTTTCTTCATaGCATCAGTATAGTCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LIEEQPRTSGVPVGPGPSAELSS*HQYSQR Trigger: CCGCTGACTATACTGATGCCATGAAGAAAGCTCGGC...GGAGGGACCAGGGCCGACAGGAACACCAGAGGTTCTTGGCTGTTCCTCTATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR TCA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTTGTCACAGCAGAGACTaGCATTGTCAAAGAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRCHSRD*HCQRRV Trigger: GACTCTTCTTTGACAATGTCAGTCTCTGCTGTGACA...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR TCA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTGGGCAAAGTAGTTTTTaGAGAAGCGAAACAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRGQSSF*RSETGS Trigger: GCTACCTGTTTCGCTTCTTCAAAAACTACTTTGCCC...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATACAGAACTACCCATGTaGGCCAGTGCCTCTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDTELPM*ASASSA Trigger: GGCGGAAGAGGCACTGGCCCACATGGGTAGTTCTGT...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| 3UTR CAA 72 bp | GACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTaGACAGCGCAGCTGTCTTGCAGTAAACTTGACCTA | + |
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Preference number: 4 (lower is better) Translates to: DTARTQPEASSV*TAQLSCSKLDL Trigger: TAGGTCAAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR TCA 90 bp | GTAGTTGAGCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGCTGCAGCTCTGGATGTaGCCCAGGGCGAGGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: VVELHVLGLHRENIELAVLQLWM*PRAREM Trigger: CATTTCCCTCGCCCTGGGTCACATCCAGAGCTGCAG...CACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | GTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTGGGGCCGCAGACGATaGAGCAGTCCTGGCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VTELSFLVPKMRFLLVRQWGRRR*SSPGSY Trigger: GTAGCTGCCAGGACTGCTCCATCGTCTGCGGCCCCA...CTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATCACCGCTACCACAATTaGCCTCAGCCAGTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDHRYHN*PQPVLQ Trigger: CTGAAGGACTGGCTGAGGCCAATTGTGGTAGCGGTG...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR TCA 90 bp | GTAGTTGAGCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGGCATCCCCATGTAGCTaGAGATGCCCAGAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VVELHVLGLHRENIELAVASPCS*RCPESR Trigger: CCTGCTCTCTGGGCATCTTCAGCTACATGGGGATGC...CACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR GCA 90 bp | AGAGCTGCATGTGACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTTGACAGCTGCGTTAAATATCTaGTGCACCAGGGAGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: RAACDTARTQPEASSVLTAALNI*CTRESL Trigger: CAATGACTCCCTGGTGCAGCAGATATTTAACGCAGC...TGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGTCACATGCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CCA 90 bp | GCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTAATGTTTGAAGGTGTGCACAGCTaGCATCGAGGACAGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: APCVGTPQREYRASCVMFEGVHS*HRGQRP Trigger: GGGGCGCTGTCCTCGATGCCAGCTGTGCACACCTTC...AAACATTACACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR TCA 90 bp | AGAGCTGCATGTGACACAGCTCGGACACAGCCTGAAGCCAGCTCAGTCTTGACAACGGCCCTATGTAACTaGGTAAGACGGGAAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: RAACDTARTQPEASSVLTTALCN*VRREEI Trigger: TATTTCTTCCCGTCTTACTCAGTTACATAGGGCCGT...TGTCAAGACTGAGCTGGCTTCAGGCTGTGTCCGAGCTGTGTCACATGCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR GCA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATTACCAAACACAGGATTaGGAAAACACCTGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDYQTQD*ENTCAG Trigger: CCCTGCGCAGGTGTTTTCGCAATCCTGTGTTTGGTA...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | CATTTTGCTGAAGCAGACACAGGTGAAAGGCAGACTTGTGAAGGACTGTTTCCCAGGCCTTCTCGTTACTaGAAGGCGCCTCCACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFAEADTGERQTCEGLFPRPSRY*KAPPHH Trigger: GTGATGTGGAGGCGCCTTCCAGTAACGAGAAGGCCT...GGGAAACAGTCCTTCACAAGTCTGCCTTTCACCTGTGTCTGCTTCAGCAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TTCCTGAGTTTAAAAGCGTGGGTAGAGCTGCATGTGACACAGCTCGGACACAGCAGGATGAAAGGAACATaGTCGGGGCCACTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLKAWVELHVTQLGHSRMKGT*SGPLLQ Trigger: TTGGAGAAGTGGCCCCGACCATGTTCCTTTCATCCT...GCTGTGTCCGAGCTGTGTCACATGCAGCTCTACCCACGCTTTTAAACTCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGGACAAAGTACACGGGTaGGCCCGAGTGCAGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: MWGRDQVTVIATGKWKLKDKVHG*ARVQVL Trigger: CAGTACCTGCACTCGGGCCCACCCGTGTACTTTGTC...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GTAGTTGAGCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGGGTCTCAGAAAAGGATaGAAGGAACATGGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVELHVLGLHRENIELAVGLRKG*KEHGRG Trigger: GCCCCGACCATGTTCCTTTCATCCTTTTCTGAGACC...CACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGGAAGGAGGAAGTCAATaGGGACGGCCATTCCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTELSFLVPKMRFLLVRQEGGSQ*GRPFPQ Trigger: TTGCGGGAATGGCCGTCCTCATTGACTTCCTCCTTC...CTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTAAAATAATCCTCAGTTaGTGTCACATTCAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRKIILS*CHIQKL Trigger: CAGTTTCTGAATGTGACAGCAACTGAGGATTATTTT...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGCTACAGGATTGGTGGTaGCCTGGACAAATACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTELSFLVPKMRFLLVRQLQDWW*PGQIPG Trigger: GCCTGGTATTTGTCCAGGTCACCACCAATCCTGTAG...CTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGGATTGCGAAAACACCTaGGCAGGGCACAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EYRASCVMFVGLQSSLIEDCENT*AGHSSS Trigger: GCTGCTGCTGTGCCCTGCGCAGGTGTTTTCGCAATC...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGCACCTGGACAGGAACTaGAGGGGCAGCTGCAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EYRASCVMFVGLQSSLIEHLDRN*RGSCRL Trigger: TAACCTGCAGCTGCCCCTGCAGTTCCTGTCCAGGTG...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTTTAAAAGCGTGGGTAGAGCTGCATGTGACACAGCTCGGACACAGCCATCTACAGACTCATTaGAGCCTTTGGTGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLKAWVELHVTQLGHSHLQTH*SLWWHF Trigger: GAAATGCCACCAAAGGCTGCAATGAGTCTGTAGATG...GCTGTGTCCGAGCTGTGTCACATGCAGCTCTACCCACGCTTTTAAACTCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | ACACAGCCTGAAGCCAGCTCAGTCTTGACAGCGCAGCTGTCTTGCAGTAAACTTCTTCCCCTTTGTCACTaGTATTCACAGAAAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TQPEASSVLTAQLSCSKLLPLCH*YSQKRR Trigger: TCGCCTTTTCTGTGAATAGCAGTGACAAAGGGGAAG...AAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGGTCATAGCCGTCCTTTaGGAGGGGTTTTGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EYRASCVMFVGLQSSLIEVIAVL*EGFWWA Trigger: GGCCCACCAAAACCCCTCCCAAAGGACGGCTATGAC...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGACGATGGAGCAGTCCTaGCAGCTACATGGCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRTMEQS*QLHGPV Trigger: CACGGGGCCATGTAGCTGCCAGGACTGCTCCATCGT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTTGAGCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTGCCGCACTTGGGGTTaGGGTTATCAGAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VVELHVLGLHRENIELAVCRTWG*GYQKGT Trigger: TGTTCCTTTCTGATAACCCCAACCCCAAGTGCGGCA...CACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | ACACAGCCTGAAGCCAGCTCAGTCTTGACAGCGCAGCTGTCTTGCAGTAAACTTAAACACAAACAGAAATaGCACGTAGGTGACCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TQPEASSVLTAQLSCSKLKHKQK*HVGDPH Trigger: ATGTGGGTCACCTACGTGGCATTTCTGTTTGTGTTT...AAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATAATGCTCTCGTTATATaGCTGCAGAACTCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDNALVI*LQNSTE Trigger: TTCTGTGGAGTTCTGCAGCCATATAACGAGAGCATT...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGGTCACATTCAGAAACTaGCTCTGGTGTGGGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: MWGRDQVTVIATGKWKLKVTFRN*LWCGLH Trigger: ATGTAGCCCACACCAGAGTCAGTTTCTGAATGTGAC...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTTCCAGTTGGTGGCATTaGAGGCACGGGCATCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKQVKVTELSFLVPKMRFSSWWH*RHGHPS Trigger: GGAGGGATGCCCGTGCCTGCAATGCCACCAACTGGA...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGGAAAACAGAGAGAAGGTGTaGACAGCTGGCATCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRASCVMFVGLQSSLIEENREKV*TAGIED Trigger: GTCCTCGATGCCAGCTGTGCACACCTTCTCTCTGTT...TTCCTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGCATTGTCACAGCCCATaGCGCCGCACACCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRHCHSP*RRTPCS Trigger: AGAACATGGTGTGCGGCGGCATGGGCTGTGACAATG...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | GCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTAATGTTTGGTGTCCAGCTCAGCTaGGTTAAATATCTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: APCVGTPQREYRASCVMFGVQLS*VKYLLH Trigger: GTGCAGCAGATATTTAACGCAGCTGAGCTGGACACC...AAACATTACACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | CATTTTGCTGAAGCAGACACAGGTGAAAGGCAGACTTGTGAAGGACTGTTTCCCTGGGAGGGGTTTTGGTaGGCCAGAATATTTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFAEADTGERQTCEGLFPWEGFW*ARIFTV Trigger: AACTGTAAATATTCTGGCCCACCAAAACCCCTCCCA...GGGAAACAGTCCTTCACAAGTCTGCCTTTCACCTGTGTCTGCTTCAGCAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTAATGTTTGTTCTGCCCTTTGCGTaGACTGTAGTTATAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APCVGTPQREYRASCVMFVLPFA*TVVIAF Trigger: GAAGGCTATAACTACAGTTCACGCAAAGGGCAGAAC...AAACATTACACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GAACTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCACACAATGTTAACAGCTaGACCGTAAGCAGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELNCWFPDNADRICSKEPHNVNS*TVSSMS Trigger: GGACATGCTGCTTACGGTTCAGCTGTTAACATTGTG...TGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTTTAAAAGCGTGGGTAGAGCTGCATGTGACACAGCTCGGACACAGCAGATGGTTTTTCTCTTaGCTCTTAATATCTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLKAWVELHVTQLGHSRWFFS*LLISNP Trigger: GGGGTTAGATATTAAGAGGCAAGAGAAAAACCATCT...GCTGTGTCCGAGCTGTGTCACATGCAGCTCTACCCACGCTTTTAAACTCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGGCGTTAAATATCTGCTaGACCAGGGAGTCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MWGRDQVTVIATGKWKLKALNIC*TRESLS Trigger: TGACAATGACTCCCTGGTGCAGCAGATATTTAACGC...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGTGGTGGCATTTCTCATaGGCTCCATCCCAAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EYRASCVMFVGLQSSLIEWWHFS*APSQGL Trigger: CAATCCTTGGGATGGAGCCCATGAGAAATGCCACCA...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGAAGTACCGCCTTCTGTaGCACCACACTGCCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRKYRLL*HHTANS Trigger: ACTGTTGGCAGTGTGGTGCCACAGAAGGCGGTACTT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GAACTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCACCAATGAGAAGAAAATaGTGCAGGTGGGATTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELNCWFPDNADRICSKEPPMRRK*CRWDFG Trigger: TCCGAAATCCCACCTGCATCATTTTCTTCTCATTGG...TGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGAGGTCTGCACTAGAATaGAGATGTTGTCCACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRRSALE*RCCPPR Trigger: TCGGGGTGGACAACATCTTCATTCTAGTGCAGACCT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| 3UTR CAA 72 bp | GGTTTCTACTGGTACGACAGTAGGGGCTGGCGATTGTaGCTTTCAGATCCATTAATACTGCTTCACAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GFYWYDSRGWRL*LSDPLILLHKL Trigger: TAACTTGTGAAGCAGTATTAATGGATCTGAAAGCAACAATCGCCAGCCCCTACTGTCGTACCAGTAGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTAATGTTTAGTGATGAAGGCCAATaGGAAGAAAATGATGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: APCVGTPQREYRASCVMFSDEGQ*EENDAG Trigger: ACCTGCATCATTTTCTTCTCATTGGCCTTCATCACT...AAACATTACACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGAAGTCCAGAACCTGGTaGAGAATCTCTTTGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MWGRDQVTVIATGKWKLKKSRTW*RISLFN Trigger: ATTGAACAAAGAGATTCTGCACCAGGTTCTGGACTT...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | GTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTTCATTGTTGTAAGATaGGGTGATGCTTTCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTELSFLVPKMRFLLVRQFIVVR*GDAFNG Trigger: GCCATTGAAAGCATCACCGCATCTTACAACAATGAA...CTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGCTTTGGGAGGGGTTTTaGTGGGCCAGAATATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: EYRASCVMFVGLQSSLIELWEGF*WARIFT Trigger: TGTAAATATTCTGGCCCACCAAAACCCCTCCCAAAG...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTACTCAATCCAGTTGGTaGCATTGCAGGCACGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVKVTELSFLVPKMRFTQSSW*HCRHGH Trigger: ATGCCCGTGCCTGCAATGCCACCAACTGGATTGAGT...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTTGTACTCAATCCAGTTaGTGGCATTGCAGGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQVKVTELSFLVPKMRFCTQSS*WHCRHG Trigger: CCCGTGCCTGCAATGCCACCAACTGGATTGAGTACA...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTAATGTTTTGTAAGTCCAGAACCTaGTGCAGAATCTCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: APCVGTPQREYRASCVMFCKSRT*CRISLF Trigger: GAACAAAGAGATTCTGCACCAGGTTCTGGACTTACA...AAACATTACACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | GAACTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCAGTCCGTTGTCTTTATTaGACATGTACTCAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELNCWFPDNADRICSKEPVRCLY*TCTQSS Trigger: ACTGGATTGAGTACATGTTCAATAAAGACAACGGAC...TGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGACAAAGCAGGTAATCTaGAGGAGGAAGTCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRTKQVI*RRKSMR Trigger: CCTCATTGACTTCCTCCTTCAGATTACCTGCTTTGT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTTGGTGTGGTAGGTCATaGAGTAAGTGGCCCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVKVTELSFLVPKMRFWCGRS*SKWPQC Trigger: ACATTGGGGCCACTTACTTCATGACCTACCACACCA...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGAGAAATATTAGTCCATaGGTGGCTCCGAGTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRRNISP*VAPSKT Trigger: GGTCTTACTCGGAGCCACTCATGGACTAATATTTCT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | GAACTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCAAAGAAAGGCCCAAAGTaGTTGTCAAAGTACTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELNCWFPDNADRICSKEPKKGPK*LSKYSF Trigger: AAAGGAGTACTTTGACAAGCACTTTGGGCCTTTCTT...TGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGCCATGTTCTGCCCTTTaGGTGAACTGTAGTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRPCSAL*VNCSYS Trigger: GCTATAACTACAGTTCACGCAAAGGGCAGAACATGG...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGGAACACAGGATGTCCAGATaGTTTTTCTCTTGCCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YRASCVMFVGLQSSLIEEHRMSR*FFSCLL Trigger: TAAGAGGCAAGAGAAAAACCATCTGGACATCCTGTG...TTCCTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGATATTAGTCCATGAGTaGCTCCGAGTAAGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKNKLKPMSVVCILSSRILVHE*LRVRPW Trigger: CCATGGTCTTACTCGGAGCCACTCATGGACTAATAT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR TCA 90 bp | TATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGGAAACTGAGCGAGTGATTTaGAATAGTCAATCACATACG | + |
|
Preference number: 4 (lower is better) Translates to: YRASCVMFVGLQSSLIEETERVI*NSQSHT Trigger: CGTATGTGATTGACTATTTCAAATCACTCGCTCAGT...TTCCTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTCTCTCGTTATATGGCTaGAGAACTCCACAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LKQVKVTELSFLVPKMRFLSLYG*RTPQKC Trigger: GCATTTCTGTGGAGTTCTGCAGCCATATAACGAGAG...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | GCAATTCCACACTCTCCATACCAAACACAGGATTGCGAAAACACCTaGGCAGGGCACAGCAGCAGCAGCAGCAGGCCGAGGGCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AIPHSPYQTQDCENT*AGHSSSSSRPRAGW Trigger: CCACCCGGCCCTCGGCCTGCTGCTGCTGCTGCTGTGCCCTGCGCAGGTGTTTTCGCAATCCTGTGTTTGGTATGGAGAGTGTGGAATTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTAGTCATAGCCGTCCTTaGGGAGGGGTTTTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRSHSRP*GGVLVG Trigger: GCCCACCAAAACCCCTCCCAAAGGACGGCTATGACT...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 90 bp | AGCCACGGGAACACCGGTCCTCCAAATGTACCCAGGCAAGGACCGTaGAGCAAACTCGTATCATTCAAGGAGGCGGGAGCCCGTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SHGNTGPPNVPRQGP*SKLVSFKEAGARTQ Trigger: CTGTGTACGGGCTCCCGCCTCCTTGAATGATACGAGTTTGCTCCACGGTCCTTGCCTGGGTACATTTGGAGGACCGGTGTTCCCGTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | TGGGGCCGCAGACGATGGAGCAGTCCTGGCAGCTACATGGCCCCGTaGCCTCATCTACAGACTCATTGCAGCCTTTGGTGGCATTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGRRRWSSPGSYMAP*PHLQTHCSLWWHFS Trigger: TGAGAAATGCCACCAAAGGCTGCAATGAGTCTGTAGATGAGGTCACGGGGCCATGTAGCTGCCAGGACTGCTCCATCGTCTGCGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 90 bp | CACGGGCATCCCTCCCACACAAGAGTCCTAAGGCCTTCTCGTTACTaGAAGGCGCCTCCACATCACGGCAGGCATTGTACATCGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: HGHPSHTRVLRPSRY*KAPPHHGRHCTSHS Trigger: CGAATGCGATGTACAATGCCTGCCGTGATGTGGAGGCGCCTTCCAGTAACGAGAAGGCCTTAGGACTCTTGTGTGGGAGGGATGCCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 90 bp | GCAGAACTGGTGAGTGACGTTGTAGAGTCTGCAGCAGGACGACTGTaGCGAGACCCAGTCAAAGTAGTCATCGATCCAGGACGAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AELVSDVVESAAGRL*RDPVKVVIDPGRGG Trigger: GCCCCCTCGTCCTGGATCGATGACTACTTTGACTGGGTCTCGCCACAGTCGTCCTGCTGCAGACTCTACAACGTCACTCACCAGTTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTCCTTTGGGAGGGGTTTaGGTGGGCCAGAATATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRPLGGV*VGQNIY Trigger: GTAAATATTCTGGCCCACCAAAACCCCTCCCAAAGG...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATTGCACCAGGGAGTCATaGTCACAGCCCATGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDCTRES*SQPMPP Trigger: CGGCGGCATGGGCTGTGACAATGACTCCCTGGTGCA...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | GGACACAGGTTGGGTCCATCACAGAAGCATTGCAGAACTGGTGAGTaGCGTTGTAGAGTCTGCAGCAGGACGACTGTGGCGAGACCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHRLGPSQKHCRTGE*RCRVCSRTTVARPS Trigger: ACTGGGTCTCGCCACAGTCGTCCTGCTGCAGACTCTACAACGTCACTCACCAGTTCTGCAATGCTTCTGTGATGGACCCAACCTGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | GTGCCTCTTCCGCCCGGCTCACTCGGCTTCCTTTGGTACTCATGGTaGATGCTCTCGTTATATGGCTGCAGAACTCCACAGAAATGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VPLPPGSLGFLWYSW*MLSLYGCRTPQKCR Trigger: GCGGCATTTCTGTGGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAGCCGGGCGGAAGAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | TTATCTCCAGTCGCAATTCCACACTCTCCATACCAAACACAGGATTaGGAAAACACCTGCGCAGGGCACAGCAGCAGCAGCAGCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSPVAIPHSPYQTQD*ENTCAGHSSSSSRP Trigger: CGGCCTGCTGCTGCTGCTGCTGTGCCCTGCGCAGGTGTTTTCGCAATCCTGTGTTTGGTATGGAGAGTGTGGAATTGCGACTGGAGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | AAAAGGATGAAAGGAACATGGTCGGGGCCACTTCTCCAAGGATCCTaGCCAGCTGCTGATCCAGCGTTTCCTCCTGAAGACGCTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRMKGTWSGPLLQGS*PAADPAFPPEDAHL Trigger: GAGATGAGCGTCTTCAGGAGGAAACGCTGGATCAGCAGCTGGGCAGGATCCTTGGAGAAGTGGCCCCGACCATGTTCCTTTCATCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | CTCTTCCGCCCGGCTCACTCGGCTTCCTTTGGTACTCATGGTGAATaGTCTCGTTATATGGCTGCAGAACTCCACAGAAATGCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFRPAHSASFGTHGE*SRYMAAELHRNAAA Trigger: AGCTGCGGCATTTCTGTGGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAGCCGGGCGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | CGTAAGTGTGATTCCACTGAATACAGAACTACCCATGTGGGCCAGTaGCTCTTCCGCCCGGCTCACTCGGCTTCCTTTGGTACTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKCDSTEYRTTHVGQ*LFRPAHSASFGTHG Trigger: ACCATGAGTACCAAAGGAAGCCGAGTGAGCCGGGCGGAAGAGGCACTGGCCCACATGGGTAGTTCTGTATTCAGTGGAATCACACTTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | CTTGTCAAAGTACTCCTTTTCCAAGCGGGCCTGACTGTGAGGGGCTaGCCAGAGCTCTACAGGATTGGTGGTGACCTGGACAAATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVKVLLFQAGLTVRG*PELYRIGGDLDKYQ Trigger: CTGGTATTTGTCCAGGTCACCACCAATCCTGTAGAGCTCTGGTCAGCCCCTCACAGTCAGGCCCGCTTGGAAAAGGAGTACTTTGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | AGTCATTGTCACAGCCCATGCCGCCGCACACCATGTTCTGCCCTTTaGGTGAACTGTAGTTATAGCCTTCCTCCAGGACAAAGTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: SHCHSPCRRTPCSAL*VNCSYSLPPGQSTR Trigger: CCGTGTACTTTGTCCTGGAGGAAGGCTATAACTACAGTTCACGCAAAGGGCAGAACATGGTGTGCGGCGGCATGGGCTGTGACAATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS GCA 90 bp | ATTCTTTCCCCTGAGGCCTCTGTTTACCCTCTGGAGTCAGAGGTCTaGAGCGGACACAGGTTGGGTCCATCACAGAAGCATTGCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ILSPEASVYPLESEV*SGHRLGPSQKHCRT Trigger: AGTTCTGCAATGCTTCTGTGATGGACCCAACCTGTGTCCGCTGCAGACCTCTGACTCCAGAGGGTAAACAGAGGCCTCAGGGGAAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | GAACTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCAGCAGCATGTCCCCCTTaGCCGCACTTGGGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELNCWFPDNADRICSKEPAACPP*PHLGLG Trigger: CCCCAACCCCAAGTGCGGCAAAGGGGGACATGCTGC...TGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 90 bp | CTGATCCAACCCGATGTCTACTTTGTTCACCACCGCAACACTGAATaGCAGAACGCCCACAAACACCGCTACCACAATTGGCCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIQPDVYFVHHRNTE*QNAHKHRYHNWPQP Trigger: TGGCTGAGGCCAATTGTGGTAGCGGTGTTTGTGGGCGTTCTGTCATTCAGTGTTGCGGTGGTGAACAAAGTAGACATCGGGTTGGATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CAA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTCCAGAATATTTACAGTaGTACCTCTTATCTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRPEYLQ*YLLSPV Trigger: GACTGGAGATAAGAGGTACAACTGTAAATATTCTGG...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | ACACAGCCTGAAGCCAGCTCAGTCTTGACAGCGCAGCTGTCTTGCAGTAAACTTATGTACTCAATCCAGTaGGTGGCATTGCAGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: TQPEASSVLTAQLSCSKLMYSIQ*VALQAR Trigger: CCGTGCCTGCAATGCCACCAACTGGATTGAGTACAT...AAGTTTACTGCAAGACAGCTGCGCTGTCAAGACTGAGCTGGCTTCAGGCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CAA 90 bp | GTCCCTCCTGCTGAGGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTATCCGTTGTCCGTTGTCTTTATaGAACATGTACTCAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPPAEAWLLLSQHCWCIRCPLSL*NMYSIQ Trigger: CTGGATTGAGTACATGTTCAATAAAGACAACGGACA...ACGGATACACCAGCAGTGTTGGGATAGGAGCAGCCAGGCCTCAGCAGGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 90 bp | GAGACTGATCCAACCCGATGTCTACTTTGTTCACCACCGCAACACTaGATGACAGAACGCCCACAAACACCGCTACCACAATTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETDPTRCLLCSPPQH*MTERPQTPLPQLAS Trigger: TGAGGCCAATTGTGGTAGCGGTGTTTGTGGGCGTTCTGTCATTCAGTGTTGCGGTGGTGAACAAAGTAGACATCGGGTTGGATCAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTGTACCCAAGATGAGGTTTCTACTGGTACGACAGTAGGGGCTGGCGATCAGAGCTCTACAGGATaGGTGGTGACCTGGACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPCTQDEVSTGTTVGAGDQSSTG*VVTWTN Trigger: ATTTGTCCAGGTCACCACCAATCCTGTAGAGCTCTG...ATCGCCAGCCCCTACTGTCGTACCAGTAGAAACCTCATCTTGGGTACAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS-3UTR CAA 90 bp | CATTTTGCTGAAGCAGACACAGGTGAAAGGCAGACTTGTGAAGGACTGTTTCCCTGCAGCGGACACAGGTaGGGTCCATCACAGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HFAEADTGERQTCEGLFPCSGHR*GPSQKH Trigger: ATGCTTCTGTGATGGACCCAACCTGTGTCCGCTGCA...GGGAAACAGTCCTTCACAAGTCTGCCTTTCACCTGTGTCTGCTTCAGCAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CCA 90 bp | CTCACTCGGCTTCCTTTGGTACTCATGGTGAATGCTCTCGTTATATaGCTGCAGAACTCCACAGAAATGCCGCAGCTCATCACCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTRLPLVLMVNALVI*LQNSTEMPQLITKL Trigger: CAACTTGGTGATGAGCTGCGGCATTTCTGTGGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTTGAGCTCCATGTGTTGGGACTCCACAGAGAGAATATAGAGCTAGCTGTGTTGCCGCACTTGGGGTaGGGGTTATCAGAAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VVELHVLGLHRENIELAVLPHLG*GLSERN Trigger: GTTCCTTTCTGATAACCCCAACCCCAAGTGCGGCAA...CACAGCTAGCTCTATATTCTCTCTGTGGAGTCCCAACACATGGAGCTCAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 90 bp | TGCCTCTTAATATCTAACCCCAACAGGCTCACAAAGCAGGTAATCTaGAGGAGGAAGTCAATGAGGACGGCCATTCCCGCAAACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLISNPNRLTKQVI*RRKSMRTAIPANRE Trigger: CTCTCTGTTTGCGGGAATGGCCGTCCTCATTGACTTCCTCCTTCAGATTACCTGCTTTGTGAGCCTGTTGGGGTTAGATATTAAGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 90 bp | TTATCAGAAAGGAACATGGGCAGGAATTTCATGAATTCTTTCCCCTaGGGCCTCTGTTTACCCTCTGGAGTCAGAGGTCTGCAGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSERNMGRNFMNSFP*GLCLPSGVRGLQRT Trigger: TGTCCGCTGCAGACCTCTGACTCCAGAGGGTAAACAGAGGCCTCAGGGGAAAGAATTCATGAAATTCCTGCCCATGTTCCTTTCTGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 90 bp | ATGCTGCACCAAGTGGGTCACAGCATGAGGCTTCCCCTTTGTCACTaGTATTCACAGAAAAGGCGATGTTACTGTCAATGGGAGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: MLHQVGHSMRLPLCH*YSQKRRCYCQWECT Trigger: AGTACACTCCCATTGACAGTAACATCGCCTTTTCTGTGAATAGCAGTGACAAAGGGGAAGCCTCATGCTGTGACCCACTTGGTGCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTGAGTTTAAAAGCGTGGGTAGAGCTGCATGTGACACAGCTCGGACACAGCAAAGGCCCAAAGTGCTaGTCAAAGTACTCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLSLKAWVELHVTQLGHSKGPKC*SKYSFS Trigger: GGAAAAGGAGTACTTTGACAAGCACTTTGGGCCTTT...GCTGTGTCCGAGCTGTGTCACATGCAGCTCTACCCACGCTTTTAAACTCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGACTAGAATGAAGATGTaGTCCACCCCGACAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MWGRDQVTVIATGKWKLKTRMKM*STPTAS Trigger: GCTGGCTGTCGGGGTGGACAACATCTTCATTCTAGT...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | CAAAGTACACGGGTGGGCCCGAGTGCAGGTACTGAGCGAGTGATTTaGAATAGTCAATCACATACGAATCGTTTGGCATTGAGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: QSTRVGPSAGTERVI*NSQSHTNRLALRET Trigger: AGTCTCTCTCAATGCCAAACGATTCGTATGTGATTGACTATTTCAAATCACTCGCTCAGTACCTGCACTCGGGCCCACCCGTGTACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | GGTTACTCTTCAGCGTCTGAAGCTGTTGAATGTCACAGCAGAGACTaGCATTGTCAAAGAAGAGTCCTGGACAGAGTTCCTGCACTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GYSSASEAVECHSRD*HCQRRVLDRVPALS Trigger: ACTTAGTGCAGGAACTCTGTCCAGGACTCTTCTTTGACAATGTCAGTCTCTGCTGTGACATTCAACAGCTTCAGACGCTGAAGAGTAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | TCTGGAGCCTCTCTGTGTCATTGTAGTAATTATTCACGGGGAAGGTaGTCACAAGCGCGGTGGCATTGTTGTAGTTCTGATCATCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGASLCHCSNYSRGR*SQARWHCCSSDHHS Trigger: GCTATGATGATCAGAACTACAACAATGCCACCGCGCTTGTGATCACCTTCCCCGTGAATAATTACTACAATGACACAGAGAGGCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | GAATATAGAGCTAGCTGTGTAATGTTTGTTGGTCTCCAGTCTTCGCTGATAGAGCAGCGTCTGAAGCTGTaGAATGTCACAGCAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: EYRASCVMFVGLQSSLIEQRLKL*NVTAET Trigger: AGTCTCTGCTGTGACATTCAACAGCTTCAGACGCTG...CTCTATCAGCGAAGACTGGAGACCAACAAACATTACACAGCTAGCTCTATATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGGCTCCATCCCAAGGATaGAAAGATCTGAAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: MWGRDQVTVIATGKWKLKAPSQG*KDLKTQ Trigger: CTGTGTTTTCAGATCTTTCAATCCTTGGGATGGAGC...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGGTAGGGATCAGGTCACAGTTATTGCCACTGGGAAATGGAAACTTAAGAATGGCGCTTGTCCGTaGTCTTTATTGAACATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MWGRDQVTVIATGKWKLKNGACP*SLLNMY Trigger: GTACATGTTCAATAAAGACAACGGACAAGCGCCATT...CTTAAGTTTCCATTTCCCAGTGGCAATAACTGTGACCTGATCCCTACCCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGACGAATCGTTTGGCATaGAGAGAGACTGATCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LKKNKLKPMSVVCILSSRTNRLA*RETDPT Trigger: GGTTGGATCAGTCTCTCTCAATGCCAAACGATTCGT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | TTAAAGAAAAATAAGTTAAAACCCATGAGCGTTGTCTGCATCCTGTCTTCCCGGATGACACCGAACATGTaGACCAGGATCATGGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LKKNKLKPMSVVCILSSRMTPNM*TRIMAM Trigger: CATAGCCATGATCCTGGTCAACATGTTCGGTGTCAT...CCGGGAAGACAGGATGCAGACAACGCTCATGGGTTTTAACTTATTTTTCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTATACCAAACACAGGATaGCGAAAACACCTGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKQVKVTELSFLVPKMRFIPNTG*RKHLRR Trigger: CCTGCGCAGGTGTTTTCGCAATCCTGTGTTTGGTAT...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS-3UTR CAA 90 bp | TTGAAACAAGTTAAAGTGACAGAACTATCCTTCCTTGTACCCAAGATGAGGTTTTGGTGCAGAATCTCTTaGTTCAATGGAGGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKQVKVTELSFLVPKMRFWCRIS*FNGGPK Trigger: CTTCGGGCCTCCATTGAACAAAGAGATTCTGCACCA...AAACCTCATCTTGGGTACAAGGAAGGATAGTTCTGTCACTTTAACTTGTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 90 bp | TTAGTCCATGAGTGGCTCCGAGTAAGACCATGGCTAAGTACATCCTaGAGTAAAATATCTCAAAAATTTGAGATTTGGCAAAGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LVHEWLRVRPWLSTS*SKISQKFEIWQRLT Trigger: TGTTAGCCTTTGCCAAATCTCAAATTTTTGAGATATTTTACTTCAGGATGTACTTAGCCATGGTCTTACTCGGAGCCACTCATGGACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 90 bp | CCCATGTGGGCCAGTGCCTCTTCCGCCCGGCTCACTCGGCTTCCTTaGGTACTCATGGTGAATGCTCTCGTTATATGGCTGCAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PMWASASSARLTRLP*VLMVNALVIWLQNS Trigger: GGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAGCCGGGCGGAAGAGGCACTGGCCCACATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | GAAGCGAAACAGGTAGCTTTCGGAGGCGTGGCTACCTaGTCCGTCGTCAGCGCCTCTGACACAGCACAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EAKQVAFGGVAT*SVVSASDTAQD Trigger: ATCCTGTGCTGTGTCAGAGGCGCTGACGACGGACAAGGTAGCCACGCCTCCGAAAGCTACCTGTTTCGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | AGACGATGGAGCAGTCCTGGCAGCTACATGGCCCCGTaGCCTCATCTACAGACTCATTGCAGCCTTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRWSSPGSYMAP*PHLQTHCSLWW Trigger: CCACCAAAGGCTGCAATGAGTCTGTAGATGAGGTCACGGGGCCATGTAGCTGCCAGGACTGCTCCATCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS GCA 72 bp | GATTCCACTGAATACAGAACTACCCATGTGGGCCAGTaGCTCTTCCGCCCGGCTCACTCGGCTTCCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DSTEYRTTHVGQ*LFRPAHSASFG Trigger: ACCAAAGGAAGCCGAGTGAGCCGGGCGGAAGAGGCACTGGCCCACATGGGTAGTTCTGTATTCAGTGGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CCA 72 bp | CCCTCCCACACAAGAGTCCTAAGGCCTTCTCGTTACTaGAAGGCGCCTCCACATCACGGCAGGCATTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: PSHTRVLRPSRY*KAPPHHGRHCT Trigger: TGTACAATGCCTGCCGTGATGTGGAGGCGCCTTCCAGTAACGAGAAGGCCTTAGGACTCTTGTGTGGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | GCCAGTGCCTCTTCCGCCCGGCTCACTCGGCTTCCTTaGGTACTCATGGTGAATGCTCTCGTTATATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASASSARLTRLP*VLMVNALVIWL Trigger: CAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAGCCGGGCGGAAGAGGCACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 90 bp | CTTATCTCCAGTCGCAATTCCACACTCTCCATACCAAACACAGGATaGCGAAAACACCTGCGCAGGGCACAGCAGCAGCAGCAGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LISSRNSTLSIPNTG*RKHLRRAQQQQQQA Trigger: GGCCTGCTGCTGCTGCTGCTGTGCCCTGCGCAGGTGTTTTCGCAATCCTGTGTTTGGTATGGAGAGTGTGGAATTGCGACTGGAGATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | TGTGAGGGGCTGACCAGAGCTCTACAGGATTGGTGGTaGCCTGGACAAATACCAGGCCAGAAGAGCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: CEGLTRALQDWW*PGQIPGQKSTQ Trigger: CTGTGTGCTCTTCTGGCCTGGTATTTGTCCAGGTCACCACCAATCCTGTAGAGCTCTGGTCAGCCCCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | CCGCCCGGCTCACTCGGCTTCCTTTGGTACTCATGGTaGATGCTCTCGTTATATGGCTGCAGAACTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PPGSLGFLWYSW*MLSLYGCRTPQ Trigger: CTGTGGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAGCCGGGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS GCA 72 bp | CACAGCCCATGCCGCCGCACACCATGTTCTGCCCTTTaGGTGAACTGTAGTTATAGCCTTCCTCCAGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: HSPCRRTPCSAL*VNCSYSLPPGQ Trigger: TTGTCCTGGAGGAAGGCTATAACTACAGTTCACGCAAAGGGCAGAACATGGTGTGCGGCGGCATGGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 72 bp | GGCGAAGCCTACTCGGGTGTAGGTGTCCAGCTCAGCTaGGTTAAATATCTGCTGCACCAGGGAGTCATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GEAYSGVGVQLS*VKYLLHQGVIV Trigger: GACAATGACTCCCTGGTGCAGCAGATATTTAACGCAGCTGAGCTGGACACCTACACCCGAGTAGGCTTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 72 bp | GGGGCTGACCAGAGCTCTACAGGATTGGTGGTGACCTaGACAAATACCAGGCCAGAAGAGCACACAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GADQSSTGLVVT*TNTRPEEHTVM Trigger: CATCACTGTGTGCTCTTCTGGCCTGGTATTTGTCCAGGTCACCACCAATCCTGTAGAGCTCTGGTCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 72 bp | CTGAACCGTAAGCAGCATGTCCCCCTTTGCCGCACTTaGGGTTGGGGTTATCAGAAAGGAACATGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LNRKQHVPLCRT*GWGYQKGTWAG Trigger: TCCTGCCCATGTTCCTTTCTGATAACCCCAACCCCAAGTGCGGCAAAGGGGGACATGCTGCTTACGGTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 72 bp | GTAAGTGTGATTCCACTGAATACAGAACTACCCATGTaGGCCAGTGCCTCTTCCGCCCGGCTCACTCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSVIPLNTELPM*ASASSARLTRL Trigger: AAGCCGAGTGAGCCGGGCGGAAGAGGCACTGGCCCACATGGGTAGTTCTGTATTCAGTGGAATCACACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 72 bp | TCGTTACTGGAAGGCGCCTCCACATCACGGCAGGCATaGTACATCGCATTCGCGAAGCTCTGTCCGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLEGASTSRQA*YIAFAKLCPTK Trigger: CTTTGTCGGACAGAGCTTCGCGAATGCGATGTACAATGCCTGCCGTGATGTGGAGGCGCCTTCCAGTAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 72 bp | TACCCTCTGGAGTCAGAGGTCTGCAGCGGACACAGGTaGGGTCCATCACAGAAGCATTGCAGAACTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: YPLESEVCSGHR*GPSQKHCRTGE Trigger: CTCACCAGTTCTGCAATGCTTCTGTGATGGACCCAACCTGTGTCCGCTGCAGACCTCTGACTCCAGAGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | CAGTCCTGGCAGCTACATGGCCCCGTGACCTCATCTACAGACTCATaGCAGCCTTTGGTGGCATTTCTCATGGGCTCCATCCCAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QSWQLHGPVTSSTDS*QPLVAFLMGSIPRI Trigger: AATCCTTGGGATGGAGCCCATGAGAAATGCCACCAAAGGCTGCAATGAGTCTGTAGATGAGGTCACGGGGCCATGTAGCTGCCAGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 90 bp | GTTTTTGAAGAAGCGAAACAGGTAGCTTTCGGAGGCGTGGCTACCTaGTCCGTCGTCAGCGCCTCTGACACAGCACAGGATGTCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VFEEAKQVAFGGVAT*SVVSASDTAQDVQM Trigger: CATCTGGACATCCTGTGCTGTGTCAGAGGCGCTGACGACGGACAAGGTAGCCACGCCTCCGAAAGCTACCTGTTTCGCTTCTTCAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | TTAGAATCCACCAGGAGCCTGCTGCAGCTCTGGATGTaGCCCAGGGCGAGGGAAATGTACAGAAACATCACG | + |
|
Preference number: 6 (lower is better) Translates to: LESTRSLLQLWM*PRAREMYRNIT Trigger: CGTGATGTTTCTGTACATTTCCCTCGCCCTGGGTCACATCCAGAGCTGCAGCAGGCTCCTGGTGGATTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | GAAGACGCTCATCTCTCTGGTAGGTCTGCACTAGAATaGAGATGTTGTCCACCCCGACAGCCAGCACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: EDAHLSGRSALE*RCCPPRQPAPG Trigger: TCCTGGTGCTGGCTGTCGGGGTGGACAACATCTTCATTCTAGTGCAGACCTACCAGAGAGATGAGCGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | TTGGGTCCATCACAGAAGCATTGCAGAACTGGTGAGTaGCGTTGTAGAGTCTGCAGCAGGACGACTGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGPSQKHCRTGE*RCRVCSRTTVA Trigger: CGCCACAGTCGTCCTGCTGCAGACTCTACAACGTCACTCACCAGTTCTGCAATGCTTCTGTGATGGACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CCA 72 bp | GTGAGTGACGTTGTAGAGTCTGCAGCAGGACGACTGTaGCGAGACCCAGTCAAAGTAGTCATCGATCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSDVVESAAGRL*RDPVKVVIDPG Trigger: TCCTGGATCGATGACTACTTTGACTGGGTCTCGCCACAGTCGTCCTGCTGCAGACTCTACAACGTCACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 72 bp | AGTCGCAATTCCACACTCTCCATACCAAACACAGGATaGCGAAAACACCTGCGCAGGGCACAGCAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRNSTLSIPNTG*RKHLRRAQQQQ Trigger: CTGCTGCTGCTGTGCCCTGCGCAGGTGTTTTCGCAATCCTGTGTTTGGTATGGAGAGTGTGGAATTGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | CAGCTACATGGCCCCGTGACCTCATCTACAGACTCATaGCAGCCTTTGGTGGCATTTCTCATGGGCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: QLHGPVTSSTDS*QPLVAFLMGSI Trigger: GATGGAGCCCATGAGAAATGCCACCAAAGGCTGCAATGAGTCTGTAGATGAGGTCACGGGGCCATGTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | AAGGCCTTCTCGTTACTGGAAGGCGCCTCCACATCACGGCAGGCATaGTACATCGCATTCGCGAAGCTCTGTCCGACAAAGTACTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: KAFSLLEGASTSRQA*YIAFAKLCPTKYSN Trigger: ATTAGAGTACTTTGTCGGACAGAGCTTCGCGAATGCGATGTACAATGCCTGCCGTGATGTGGAGGCGCCTTCCAGTAACGAGAAGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | TGTCCGTTGTCTTTATTGAACATGTACTCAATCCAGTTGGTGGCATaGCAGGCACGGGCATCCCTCCCACACAAGAGTCCTAAGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLSLLNMYSIQLVA*QARASLPHKSPKAF Trigger: GAAGGCCTTAGGACTCTTGTGTGGGAGGGATGCCCGTGCCTGCAATGCCACCAACTGGATTGAGTACATGTTCAATAAAGACAACGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | AATGGCGCTTGTCCGTTGTCTTTATTGAACATGTACTCAATCCAGTaGGTGGCATTGCAGGCACGGGCATCCCTCCCACACAAGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NGACPLSLLNMYSIQ*VALQARASLPHKSP Trigger: AGGACTCTTGTGTGGGAGGGATGCCCGTGCCTGCAATGCCACCAACTGGATTGAGTACATGTTCAATAAAGACAACGGACAAGCGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | CAGCTACATGGCCCCGTGACCTCATCTACAGACTCATTGCAGCCTTaGGTGGCATTTCTCATGGGCTCCATCCCAAGGATTGAAAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: QLHGPVTSSTDSLQP*VAFLMGSIPRIERS Trigger: AGATCTTTCAATCCTTGGGATGGAGCCCATGAGAAATGCCACCAAAGGCTGCAATGAGTCTGTAGATGAGGTCACGGGGCCATGTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | CCCGATGTCTACTTTGTTCACCACCGCAACACTGAATaGCAGAACGCCCACAAACACCGCTACCACAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: PDVYFVHHRNTE*QNAHKHRYHNW Trigger: CCAATTGTGGTAGCGGTGTTTGTGGGCGTTCTGTCATTCAGTGTTGCGGTGGTGAACAAAGTAGACATCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | CCAACCCGATGTCTACTTTGTTCACCACCGCAACACTaGATGACAGAACGCCCACAAACACCGCTACCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PTRCLLCSPPQH*MTERPQTPLPQ Trigger: TTGTGGTAGCGGTGTTTGTGGGCGTTCTGTCATTCAGTGTTGCGGTGGTGAACAAAGTAGACATCGGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | TGTCCGTTGTCTTTATTGAACATGTACTCAATCCAGTaGGTGGCATTGCAGGCACGGGCATCCCTCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: CPLSLLNMYSIQ*VALQARASLPH Trigger: GTGTGGGAGGGATGCCCGTGCCTGCAATGCCACCAACTGGATTGAGTACATGTTCAATAAAGACAACGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | GTGGTAATCAGCGTAGATATAGAAGTCGTCGCCTACTaGGCTGTCCAGCACCGCATGGCTGTTCTGGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VVISVDIEVVAY*AVQHRMAVLEV Trigger: TACTTCCAGAACAGCCATGCGGTGCTGGACAGCCAAGTAGGCGACGACTTCTATATCTACGCTGATTACCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | ATATCTAACCCCAACAGGCTCACAAAGCAGGTAATCTaGAGGAGGAAGTCAATGAGGACGGCCATTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISNPNRLTKQVI*RRKSMRTAIPA Trigger: TGCGGGAATGGCCGTCCTCATTGACTTCCTCCTTCAGATTACCTGCTTTGTGAGCCTGTTGGGGTTAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | GTACACGGGTGGGCCCGAGTGCAGGTACTGAGCGAGTaGTTTGAAATAGTCAATCACATACGAATCGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHGWARVQVLSE*FEIVNHIRIVW Trigger: CCAAACGATTCGTATGTGATTGACTATTTCAAATCACTCGCTCAGTACCTGCACTCGGGCCCACCCGTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | AGGAACATGGGCAGGAATTTCATGAATTCTTTCCCCTaGGGCCTCTGTTTACCCTCTGGAGTCAGAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RNMGRNFMNSFP*GLCLPSGVRGL Trigger: CAGACCTCTGACTCCAGAGGGTAAACAGAGGCCTCAGGGGAAAGAATTCATGAAATTCCTGCCCATGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS GCA 72 bp | ATGCTTTCAATGGCGATCTGTAAGTCCAGAACCTGGTaGAGAATCTCTTTGTTCAATGGAGGCCCGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MLSMAICKSRTW*RISLFNGGPKG Trigger: GCCCTTCGGGCCTCCATTGAACAAAGAGATTCTGCACCAGGTTCTGGACTTACAGATCGCCATTGAAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS GCA 72 bp | CCGGCTCACTCGGCTTCCTTTGGTACTCATGGTGAATaGTCTCGTTATATGGCTGCAGAACTCCACAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PAHSASFGTHGE*SRYMAAELHRN Trigger: ATTTCTGTGGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAGCCGAGTGAGCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | CTGGACAGAGTTCCTGCACTAAGTCATAGCCGTCCTTaGGGAGGGGTTTTGGTGGGCCAGAATATTTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LDRVPALSHSRP*GGVLVGQNIYS Trigger: ACTGTAAATATTCTGGCCCACCAAAACCCCTCCCAAAGGACGGCTATGACTTAGTGCAGGAACTCTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | TCTTTATTGAACATGTACTCAATCCAGTTGGTGGCATaGCAGGCACGGGCATCCCTCCCACACAAGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLNMYSIQLVA*QARASLPHKSP Trigger: AGGACTCTTGTGTGGGAGGGATGCCCGTGCCTGCAATGCCACCAACTGGATTGAGTACATGTTCAATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | AGAAGAGTCCTGGACAGAGTTCCTGCACTAAGTCATAGCCGTCCTTaGGGAGGGGTTTTGGTGGGCCAGAATATTTACAGTTGTACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRVLDRVPALSHSRP*GGVLVGQNIYSCTS Trigger: AGAGGTACAACTGTAAATATTCTGGCCCACCAAAACCCCTCCCAAAGGACGGCTATGACTTAGTGCAGGAACTCTGTCCAGGACTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS GCA 72 bp | CAAGTGGGTCACAGCATGAGGCTTCCCCTTTGTCACTaGTATTCACAGAAAAGGCGATGTTACTGTCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: QVGHSMRLPLCH*YSQKRRCYCQW Trigger: CCATTGACAGTAACATCGCCTTTTCTGTGAATAGCAGTGACAAAGGGGAAGCCTCATGCTGTGACCCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 72 bp | CTTCCTTTGGTACTCATGGTGAATGCTCTCGTTATATaGCTGCAGAACTCCACAGAAATGCCGCAGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LPLVLMVNALVI*LQNSTEMPQLI Trigger: GATGAGCTGCGGCATTTCTGTGGAGTTCTGCAGCCATATAACGAGAGCATTCACCATGAGTACCAAAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | GAAAACACAGGAATGATGGTAAATGGCGCTTGTCCGTTGTCTTTATaGAACATGTACTCAATCCAGTTGGTGGCATTGCAGGCACGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ENTGMMVNGACPLSL*NMYSIQLVALQARA Trigger: TGCCCGTGCCTGCAATGCCACCAACTGGATTGAGTACATGTTCAATAAAGACAACGGACAAGCGCCATTTACCATCATTCCTGTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | TCAGCGTCTGAAGCTGTTGAATGTCACAGCAGAGACTaGCATTGTCAAAGAAGAGTCCTGGACAGAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SASEAVECHSRD*HCQRRVLDRVP Trigger: AGGAACTCTGTCCAGGACTCTTCTTTGACAATGTCAGTCTCTGCTGTGACATTCAACAGCTTCAGACGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | ACAGTCATCAAATGCTGCACCAAGTGGGTCACAGCATaGGGCTTCCCCTTTGTCACTGCTATTCACAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TVIKCCTKWVTA*GFPFVTAIHRK Trigger: TTTTCTGTGAATAGCAGTGACAAAGGGGAAGCCTCATGCTGTGACCCACTTGGTGCAGCATTTGATGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 72 bp | CCTGCACTAAGTCATAGCCGTCCTTTGGGAGGGGTTTaGGTGGGCCAGAATATTTACAGTTGTACCTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PALSHSRPLGGV*VGQNIYSCTSY Trigger: ATAAGAGGTACAACTGTAAATATTCTGGCCCACCAAAACCCCTCCCAAAGGACGGCTATGACTTAGTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CAA 72 bp | ATGATGACGGTGAACACGTCACTGTTACTTTCCCGATaGAGCTCATCTTCGATGCTTCGCTCAGCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MMTVNTSLLLSR*SSSSMLRSAVK Trigger: TTTCACTGCTGAGCGAAGCATCGAAGATGAGCTCAATCGGGAAAGTAACAGTGACGTGTTCACCGTCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS TCA 72 bp | TCAATCACATACGAATCGTTTGGCATTGAGAGAGACTaGTCCAACCCGATGTCTACTTTGTTCACCACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SITYESFGIERD*SNPMSTLFTTA Trigger: TGCGGTGGTGAACAAAGTAGACATCGGGTTGGATCAGTCTCTCTCAATGCCAAACGATTCGTATGTGATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS GCA 72 bp | CTGACACAGCACAGGATGTCCAGATGGTTTTTCTCTTaGCTCTTAATATCTAACCCCAACAGGCTCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTQHRMSRWFFS*LLISNPNRLTK Trigger: CTTTGTGAGCCTGTTGGGGTTAGATATTAAGAGGCAAGAGAAAAACCATCTGGACATCCTGTGCTGTGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 72 bp | CTACAGACTCATTGCAGCCTTTGGTGGCATTTCTCATaGGCTCCATCCCAAGGATTGAAAGATCTGAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LQTHCSLWWHFS*APSQGLKDLKT Trigger: TGTTTTCAGATCTTTCAATCCTTGGGATGGAGCCCATGAGAAATGCCACCAAAGGCTGCAATGAGTCTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
||
| CDS CCA 72 bp | CACTGCTATTCACAGAAAAGGCGATGTTACTGTCAATaGGAGTGTACTCAGACACAAAGTACCGCCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: HCYSQKRRCYCQ*ECTQTQSTAFC Trigger: ACAGAAGGCGGTACTTTGTGTCTGAGTACACTCCCATTGACAGTAACATCGCCTTTTCTGTGAATAGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | TCTCTGTGTCATTGTAGTAATTATTCACGGGGAAGGTaGTCACAAGCGCGGTGGCATTGTTGTAGTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLCHCSNYSRGR*SQARWHCCSSD Trigger: ATCAGAACTACAACAATGCCACCGCGCTTGTGATCACCTTCCCCGTGAATAATTACTACAATGACACAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 90 bp | GAAAGATCTGAAAACACAGGAATGATGGTAAATGGCGCTTGTCCGTaGTCTTTATTGAACATGTACTCAATCCAGTTGGTGGCATTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ERSENTGMMVNGACP*SLLNMYSIQLVALQ Trigger: CTGCAATGCCACCAACTGGATTGAGTACATGTTCAATAAAGACAACGGACAAGCGCCATTTACCATCATTCCTGTGTTTTCAGATCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS CAA 72 bp | GAAAACACAGGAATGATGGTAAATGGCGCTTGTCCGTaGTCTTTATTGAACATGTACTCAATCCAGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ENTGMMVNGACP*SLLNMYSIQLV Trigger: CACCAACTGGATTGAGTACATGTTCAATAAAGACAACGGACAAGCGCCATTTACCATCATTCCTGTGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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| CDS TCA 72 bp | TTTGAAATAGTCAATCACATACGAATCGTTTGGCATTaGGAGAGACTGATCCAACCCGATGTCTACTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FEIVNHIRIVWH*ERLIQPDVYFV Trigger: AACAAAGTAGACATCGGGTTGGATCAGTCTCTCTCAATGCCAAACGATTCGTATGTGATTGACTATTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025279.6 |
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