Pregenerated sensors for NPAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033054Ensembl transcript IDs: ENSMUST00000035850.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CGCAGTCTGTCTCTGGCCCGTTTCCTACTCGCCATCTaGAGGACACTAGTTTTAAATAGCTACTGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSLSLARFLLAI*RTLVLNSYWSL Trigger: CAGAGACCAGTAGCTATTTAAAACTAGTGTCCTTCAGATGGCGAGTAGGAAACGGGCCAGAGACAGACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| 3UTR TCA 72 bp | AAGTTTAGGCCAGCTTTTCAACTTGACTGTTGTTTATaGGTCAGTCCAACACAGAGAAGGCACCTCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KFRPAFQLDCCL*VSPTQRRHLSL Trigger: GAGTGAGAGGTGCCTTCTCTGTGTTGGACTGACTCATAAACAACAGTCAAGTTGAAAAGCTGGCCTAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| 3UTR TCA 72 bp | GGCGAAGTCAATCAAGACAGTGTGGGAATATTAGGTTaGTTTAAGCTCTATTTTTACACAATATACACATGT | + |
|
Preference number: 3 (lower is better) Translates to: GEVNQDSVGILG*FKLYFYTIYTC Trigger: ACATGTGTATATTGTGTAAAAATAGAGCTTAAATCAACCTAATATTCCCACACTGTCTTGATTGACTTCGCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| 3UTR CAA 72 bp | CACATGTACAATATACAGTGTCAAAGCTGTACAGTTTaGCAGATTGGGTTTACTTACATTTCTGCGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HMYNIQCQSCTV*QIGFTYISAYV Trigger: AACATACGCAGAAATGTAAGTAAACCCAATCTGCAAAACTGTACAGCTTTGACACTGTATATTGTACATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | TGCAGCGAGGCTATGGCTTTTTCGTTCCTCAAGCTCCCATTCTGCTaGCCACCAGGCAGTTTTGAGGTGTCTGCATTCTTCGGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSEAMAFSFLKLPFC*PPGSFEVSAFFGLS Trigger: GGAAAGGCCGAAGAATGCAGACACCTCAAAACTGCCTGGTGGGCAGCAGAATGGGAGCTTGAGGAACGAAAAAGCCATAGCCTCGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | TCCTGCAGCGAGGCTATGGCTTTTTCGTTCCTCAAGCTCCCATTCTaGTGCCCACCAGGCAGTTTTGAGGTGTCTGCATTCTTCGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSEAMAFSFLKLPF*CPPGSFEVSAFFGL Trigger: AAGGCCGAAGAATGCAGACACCTCAAAACTGCCTGGTGGGCAGCAGAATGGGAGCTTGAGGAACGAAAAAGCCATAGCCTCGCTGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | GTTTTCACTGCCTGTTTCACTGGCTGGGCTGCAGGCAGGCAAGTCTaGAGTGACAGGAGGGATCATTACTCTTGGCATGCTGCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFTACFTGWAAGRQV*SDRRDHYSWHAAFF Trigger: GAAGAAGGCAGCATGCCAAGAGTAATGATCCCTCCTGTCACTGCAGACTTGCCTGCCTGCAGCCCAGCCAGTGAAACAGGCAGTGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | TCACCAATCCCAGGAGGTGGTTTGCTCTGCAGTGGAGAGTTATCTTaGCAATCTGCTTGTGGCTGTGCAGCAGCTGGCGATACAGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPIPGGGLLCSGELS*QSACGCAAAGDTVL Trigger: TAACACTGTATCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGGGATTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | GCTGTAGTCCTAGCAATTGCTGCTCTGGAGAGAATCATGAGCGTGTaGGCAGCCATGCTCACACTGTTTTCACTGCCTGTTTCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVVLAIAALERIMSV*AAMLTLFSLPVSLA Trigger: AGCCAGTGAAACAGGCAGTGAAAACAGTGTGAGCATGGCTGCCCACACGCTCATGATTCTCTCCAGAGCAGCAATTGCTAGGACTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | ACAGCAAACGCACTGTTAGATTTAGGTGGTGTCTGTAACTGCTGTTaGGGAGGCTGTGCAGTCATAGGTGCAGAACTCCCAGGCAATACC | + |
|
Preference number: 5 (lower is better) Translates to: TANALLDLGGVCNCC*GGCAVIGAELPGNT Trigger: GGTATTGCCTGGGAGTTCTGCACCTATGACTGCACAGCCTCCTCAACAGCAGTTACAGACACCACCTAAATCTAACAGTGCGTTTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | CGGCCTTTCCCCATCACCGCACAATTCATTCTCCTTGTTAGCTGTTaGTTTATGGAGAGACTCAAGGGCCACTTCTGTGGGGGAAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPFPITAQFILLVSC*FMERLKGHFCGGNF Trigger: AAAGTTTCCCCCACAGAAGTGGCCCTTGAGTCTCTCCATAAAGCAACAGCTAACAAGGAGAATGAATTGTGCGGTGATGGGGAAAGGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | TCAGTATCGGCACTCCTATTGGCTGGGCTGTGGATGGGAACATCCTaGAGTATTTCTGCCCCAATTAAAGAACTGGCAGGTTTACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSALLLAGLWMGTS*SISAPIKELAGLLC Trigger: GCAGAGTAAACCTGCCAGTTCTTTAATTGGGGCAGAAATACTGCAGGATGTTCCCATCCACAGCCCAGCCAATAGGAGTGCCGATACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | TGCCATCTTCATTCTGAGTGTTGTTTACCATGGGCTCCTCAGGTTTaGGCACTAAAAGGTTCTGCTCCATGGAGCCGGAATCCCCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: CHLHSECCLPWAPQV*ALKGSAPWSRNPLL Trigger: AAGTAGGGGATTCCGGCTCCATGGAGCAGAACCTTTTAGTGCTCAAACCTGAGGAGCCCATGGTAAACAACACTCAGAATGAAGATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | GCAGTCATAGGTGCAGAACTCCCAGGCAATACCACTACATTAGACTaGCTGACAGTTGGTCCCAAGGCTGTTGAATCAGTCATACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVIGAELPGNTTTLD*LTVGPKAVESVIQV Trigger: TACCTGTATGACTGATTCAACAGCCTTGGGACCAACTGTCAGTCAGTCTAATGTAGTGGTATTGCCTGGGAGTTCTGCACCTATGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | TTTGCAACAGAAGAAACAGTACTATCGAAACAAAGCACCCGCCTATaGCTTTCAAATGGCTTGCTGGGAGGAGCTACCCTCTCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FATEETVLSKQSTRL*LSNGLLGGATLSPE Trigger: CTCAGGAGAGAGGGTAGCTCCTCCCAGCAAGCCATTTGAAAGTCATAGGCGGGTGCTTTGTTTCGATAGTACTGTTTCTTCTGTTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | CATTGGTCTCACCACCAAGAGACACAAATGAAGTCACTGGCACACTaGGCTGATCAGGCTGATACTGAGATTGACTCAGTATATCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HWSHHQETQMKSLAH*ADQADTEIDSVYLQ Trigger: CTGCAGATATACTGAGTCAATCTCAGTATCAGCCTGATCAGCCCAGTGTGCCAGTGACTTCATTTGTGTCTCTTGGTGGTGAGACCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | CCATTCTGTCCAACTACAGACACAGGTATCATTCCCACCATTCCTTaGAGTACAGGCTGGACTGGAGAAGCAATTATGATGGCAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFCPTTDTGIIPTIP*STGWTGEAIMMADP Trigger: AGGATCTGCCATCATAATTGCTTCTCCAGTCCAGCCTGTACTTCAAGGAATGGTGGGAATGATACCTGTGTCTGTAGTTGGACAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | AGAGACTCAAGGGCCACTTCTGTGGGGGAAACTTTCTTTTCAGACTaGACTTCTTTCACAGTGGTGTGTCGACTAGAGGCAGTTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RDSRATSVGETFFSD*TSFTVVCRLEAVSD Trigger: ATCAGAAACTGCCTCTAGTCGACACACCACTGTGAAAGAAGTTCAGTCTGAAAAGAAAGTTTCCCCCACAGAAGTGGCCCTTGAGTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | CACACTGGGCTGATCAGGCTGATACTGAGATTGACTCAGTATATCTaGAGACAAAGAATTCTTCTCACCCACAGCCACTTCAGCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HTGLIRLILRLTQYI*RQRILLTHSHFSFS Trigger: ACTGAAGCTGAAGTGGCTGTGGGTGAGAAGAATTCTTTGTCTGCAGATATACTGAGTCAATCTCAGTATCAGCCTGATCAGCCCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | CCTGAAAGGCGGGGTCTGATTCTGTCTGCTCCAAAATATCTTGTATaGCTTCTTCAGACATATGGATTTCACTCGGAAGGCCTAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PERRGLILSAPKYLV*LLQTYGFHSEGLAV Trigger: AACTGCTAGGCCTTCCGAGTGAAATCCATATGTCTGAAGAAGCCATACAAGATATTTTGGAGCAGACAGAATCAGACCCCGCCTTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | CTGTATGTATCCTCCGTCCTTAGGAACACATGGTGCAACATTGGCTaGAAAAGCAATGCCATCTTCATTCTGAGTGTTGTTTACCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYVSSVLRNTWCNIG*KSNAIFILSVVYHG Trigger: CCCATGGTAAACAACACTCAGAATGAAGATGGCATTGCTTTTTCAGCCAATGTTGCACCATGTGTTCCTAAGGACGGAGGATACATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | AATTCTTCTCACCCACAGCCACTTCAGCTTCAGTGGGTATCTGACTaGCGAATAACTCAGAACAATGTTCATTACATTCAGCAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSSHPQPLQLQWVSD*RITQNNVHYIQQSF Trigger: GAAGCTCTGCTGAATGTAATGAACATTGTTCTGAGTTATTCGCCAGTCAGATACCCACTGAAGCTGAAGTGGCTGTGGGTGAGAAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | GATGCATCTACCTCTGTTGAGTTGCTAGTTTTACCATCAGTATTTTaGGTCTCAGGAGAGACTCCCACTGAACCACCAGATTCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DASTSVELLVLPSVF*VSGETPTEPPDSEE Trigger: TTCTTCAGAATCTGGTGGTTCAGTGGGAGTCTCTCCTGAGACCCAAAATACTGATGGTAAAACTAGCAACTCAACAGAGGTAGATGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | TGTGGATGGGAACATCCTGCAGTATTTCTGCCCCAATTAAAGAACTaGCAGGTTTACTCTGCTCTTGTTTTTGATCCTTCACAGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CGWEHPAVFLPQLKN*QVYSALVFDPSQFH Trigger: GTGGAACTGTGAAGGATCAAAAACAAGAGCAGAGTAAACCTGCCAGTTCTTTAATTGGGGCAGAAATACTGCAGGATGTTCCCATCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | AAAGAATTCTTCTCACCCACAGCCACTTCAGCTTCAGTGGGTATCTaGCTGGCGAATAACTCAGAACAATGTTCATTACATTCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KEFFSPTATSASVGI*LANNSEQCSLHSAE Trigger: CTCTGCTGAATGTAATGAACATTGTTCTGAGTTATTCGCCAGTCAGATACCCACTGAAGCTGAAGTGGCTGTGGGTGAGAAGAATTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | AAAGACTCTCCAGCTGTATTAGTTACAGTACTTTGTGGCTGTGACTaGTTGACCACCACAATATTTGACCTCACTGGAGTTGAAATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KDSPAVLVTVLCGCD*LTTTIFDLTGVEIG Trigger: CCCAATTTCAACTCCAGTGAGGTCAAATATTGTGGTGGTCAACCAGTCACAGCCACAAAGTACTGTAACTAATACAGCTGGAGAGTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 90 bp | CTGCAGACAAAGAATTCTTCTCACCCACAGCCACTTCAGCTTCAGTaGGTATCTGACTGGCGAATAACTCAGAACAATGTTCATTACATT | + |
|
Preference number: 5 (lower is better) Translates to: LQTKNSSHPQPLQLQ*VSDWRITQNNVHYI Trigger: AATGTAATGAACATTGTTCTGAGTTATTCGCCAGTCAGATACCCACTGAAGCTGAAGTGGCTGTGGGTGAGAAGAATTCTTTGTCTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | ATTTTCCGTTTCTTTGTAGTGCTCCTTGAAGATGTTCTAAACTGCTaGGTGTTATCTTTTAGAGGAGTTGCTGTAGTCCTAGCAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFRFFVVLLEDVLNC*VLSFRGVAVVLAIA Trigger: AGCAATTGCTAGGACTACAGCAACTCCTCTAAAAGATAACACGCAGCAGTTTAGAACATCTTCAAGGAGCACTACAAAGAAACGGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 90 bp | GTTTTCTCCACTGATACTAGACACAGCACTGTTAAGCTCTGCATCTaGGGAAACAAATGGATCATCACTAATGATAATTTTGAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VFSTDTRHSTVKLCI*GNKWIITNDNFERD Trigger: GTCTCTCTCAAAATTATCATTAGTGATGATCCATTTGTTTCCTCAGATGCAGAGCTTAACAGTGCTGTGTCTAGTATCAGTGGAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 90 bp | TCAATTTTCCGTTTCTTTGTAGTGCTCCTTGAAGATGTTCTAAACTaGTGCGTGTTATCTTTTAGAGGAGTTGCTGTAGTCCTAGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SIFRFFVVLLEDVLN*CVLSFRGVAVVLAI Trigger: AATTGCTAGGACTACAGCAACTCCTCTAAAAGATAACACGCAGCAGTTTAGAACATCTTCAAGGAGCACTACAAAGAAACGGAAAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | CCCAGGAGGTGGTTTGCTCTGCAGTGGAGAGTTATCTaGGCAATCTGCTTGTGGCTGTGCAGCAGCTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PRRWFALQWRVI*AICLWLCSSWR Trigger: TCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | CCAGGAGGTGGTTTGCTCTGCAGTGGAGAGTTATCTTaGCAATCTGCTTGTGGCTGTGCAGCAGCTGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGGGLLCSGELS*QSACGCAAAGD Trigger: ATCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | AGTATCTCCATCTTTCACAGAAGGGGGCTCGGGCTCTaGAGCACTGGCAGACTGAAGTGGCTCCGTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SISIFHRRGLGL*STGRLKWLRLA Trigger: AGCAAGACGGAGCCACTTCAGTCTGCCAGTGCTCAAGAGCCCGAGCCCCCTTCTGTGAAAGATGGAGATACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | GTCCGGGGTACTGGCAAGTCAGTATCGGCACTCCTATaGGCTGGGCTGTGGATGGGAACATCCTGCAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: VRGTGKSVSALL*AGLWMGTSCSI Trigger: AATACTGCAGGATGTTCCCATCCACAGCCCAGCCAATAGGAGTGCCGATACTGACTTGCCAGTACCCCGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | GGGTACTGGCAAGTCAGTATCGGCACTCCTATTGGCTaGGCTGTGGATGGGAACATCCTGCAGTATTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GYWQVSIGTPIG*AVDGNILQYFC Trigger: GCAGAAATACTGCAGGATGTTCCCATCCACAGCCCAGCCAATAGGAGTGCCGATACTGACTTGCCAGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GGTAAAACCAGTAACTCTGAACTGACGGGAGCTGCCTaGGATGCTAGCCATCGCTGCCGCTTGATTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GKTSNSELTGAA*DASHRCRLISA Trigger: TGCAGAAATCAAGCGGCAGCGATGGCTAGCATCTCAGGCAGCTCCCGTCAGTTCAGAGTTACTGGTTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GTCCTGAAGCATAAGGTAAAACCAGTAACTCTGAACTaGCGGGAGCTGCCTGAGATGCTAGCCATCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLKHKVKPVTLN*RELPEMLAIAA Trigger: GGCAGCGATGGCTAGCATCTCAGGCAGCTCCCGTCAGTTCAGAGTTACTGGTTTTACCTTATGCTTCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | CGAAACAAAGCACCCGCCTATGACTTTCAAATGGCTTaGTGGGAGGAGCTACCCTCTCTCCTGAGAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RNKAPAYDFQMA*WEELPSLLRGK Trigger: TTTCCCTCTCAGGAGAGAGGGTAGCTCCTCCCAGCAAGCCATTTGAAAGTCATAGGCGGGTGCTTTGTTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | AGGCAAGTCTGCAGTGACAGGAGGGATCATTACTCTTaGCATGCTGCCTTCTTCACCACAGCGTCTACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RQVCSDRRDHYS*HAAFFTTASTS Trigger: GCTAGTAGACGCTGTGGTGAAGAAGGCAGCATGCCAAGAGTAATGATCCCTCCTGTCACTGCAGACTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | TTCACCAATCCCAGGAGGTGGTTTGCTCTGCAGTGGAGAGTTATCTaGGCAATCTGCTTGTGGCTGTGCAGCAGCTGGCGATACAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FTNPRRWFALQWRVI*AICLWLCSSWRYSV Trigger: AACACTGTATCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGGGATTGGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | CTTTTTCGTTCCTCAAGCTCCCATTCTGCTGCCCACCAGGCAGTTTaGAGGTGTCTGCATTCTTCGGCCTTTCCCCATCACCGCACAATT | + |
|
Preference number: 6 (lower is better) Translates to: LFRSSSSHSAAHQAV*RCLHSSAFPHHRTI Trigger: AATTGTGCGGTGATGGGGAAAGGCCGAAGAATGCAGACACCTCAAAACTGCCTGGTGGGCAGCAGAATGGGAGCTTGAGGAACGAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | TGGTTTGCTCTGCAGTGGAGAGTTATCTTGGCAATCTaGTTGTGGCTGTGCAGCAGCTGGCGATACAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WFALQWRVILAI*LWLCSSWRYSV Trigger: AACACTGTATCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | CCCAAACTTTCACCAATCCCAGGAGGTGGTTTGCTCTaGAGTGGAGAGTTATCTTGGCAATCTGCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PKLSPIPGGGLL*SGELSWQSACG Trigger: GCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGGGATTGGTGAAAGTTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | GCTATGGCTTTTTCGTTCCTCAAGCTCCCATTCTGCTaGCCACCAGGCAGTTTTGAGGTGTCTGCATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AMAFSFLKLPFC*PPGSFEVSAFF Trigger: GAAGAATGCAGACACCTCAAAACTGCCTGGTGGGCAGCAGAATGGGAGCTTGAGGAACGAAAAAGCCATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | ATTTCTCGTTCGAGCTCTCTGATGGGCAGCAAACCCTaGAGAACTGTGCATGCTCCTGATCTGAGAGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISRSSSLMGSKP*RTVHAPDLREC Trigger: ACACTCTCTCAGATCAGGAGCATGCACAGTTCTCCAGGGTTTGCTGCCCATCAGAGAGCTCGAACGAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GGTGCAGAACTCCCAGGCAATACCACTACATTAGACTaGCTGACAGTTGGTCCCAAGGCTGTTGAATCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GAELPGNTTTLD*LTVGPKAVESV Trigger: GACTGATTCAACAGCCTTGGGACCAACTGTCAGTCAGTCTAATGTAGTGGTATTGCCTGGGAGTTCTGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GCACTGTTAGATTTAGGTGGTGTCTGTAACTGCTGTTaGGGAGGCTGTGCAGTCATAGGTGCAGAACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLDLGGVCNCC*GGCAVIGAELP Trigger: TGGGAGTTCTGCACCTATGACTGCACAGCCTCCTCAACAGCAGTTACAGACACCACCTAAATCTAACAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | CCCATCACCGCACAATTCATTCTCCTTGTTAGCTGTTaGTTTATGGAGAGACTCAAGGGCCACTTCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PITAQFILLVSC*FMERLKGHFCG Trigger: CCCACAGAAGTGGCCCTTGAGTCTCTCCATAAAGCAACAGCTAACAAGGAGAATGAATTGTGCGGTGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | AGTCAGTATCGGCACTCCTATTGGCTGGGCTGTGGATaGGAACATCCTGCAGTATTTCTGCCCCAATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SQYRHSYWLGCG*EHPAVFLPQLK Trigger: CTTTAATTGGGGCAGAAATACTGCAGGATGTTCCCATCCACAGCCCAGCCAATAGGAGTGCCGATACTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TTTGCTCTGCAGTGGAGAGTTATCTTGGCAATCTGCTaGTGGCTGTGCAGCAGCTGGCGATACAGTGTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: FALQWRVILAIC*WLCSSWRYSVS Trigger: ACTAACACTGTATCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | TCTGCATTCTTCGGCCTTTCCCCATCACCGCACAATTCATTCTCCTaGTTAGCTGTTGCTTTATGGAGAGACTCAAGGGCCACTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SAFFGLSPSPHNSFS*LAVALWRDSRATSV Trigger: CACAGAAGTGGCCCTTGAGTCTCTCCATAAAGCAACAGCTAACAAGGAGAATGAATTGTGCGGTGATGGGGAAAGGCCGAAGAATGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | TTGATTTCTGCAATTCCATTTCTCGTTCGAGCTCTCTaGTGGGCAGCAAACCCTGGAGAACTGTGCATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LISAIPFLVRAL*WAANPGELCML Trigger: GAGCATGCACAGTTCTCCAGGGTTTGCTGCCCATCAGAGAGCTCGAACGAGAAATGGAATTGCAGAAATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GAAGAAACAGTACTATCGAAACAAAGCACCCGCCTATaGCTTTCAAATGGCTTGCTGGGAGGAGCTACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EETVLSKQSTRL*LSNGLLGGATL Trigger: GAGGGTAGCTCCTCCCAGCAAGCCATTTGAAAGTCATAGGCGGGTGCTTTGTTTCGATAGTACTGTTTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | AGGGCCACTTCTGTGGGGGAAACTTTCTTTTCAGACTaGACTTCTTTCACAGTGGTGTGTCGACTAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RATSVGETFFSD*TSFTVVCRLEA Trigger: TGCCTCTAGTCGACACACCACTGTGAAAGAAGTTCAGTCTGAAAAGAAAGTTTCCCCCACAGAAGTGGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | GTTATCTTGGCAATCTGCTTGTGGCTGTGCAGCAGCTaGCGATACAGTGTTAGTCTCAGTTTTCCTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VILAICLWLCSS*RYSVSLSFPVC Trigger: GCAAACAGGAAAACTGAGACTAACACTGTATCGCCAGCTGCTGCACAGCCACAAGCAGATTGCCAAGATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | TCCATTCTGTCCAACTACAGACACAGGTATCATTCCCACCATTCCTaGAAGTACAGGCTGGACTGGAGAAGCAATTATGATGGCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SILSNYRHRYHSHHS*KYRLDWRSNYDGRS Trigger: GGATCTGCCATCATAATTGCTTCTCCAGTCCAGCCTGTACTTCAAGGAATGGTGGGAATGATACCTGTGTCTGTAGTTGGACAGAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | CACATTTACACCCAAACTTTCACCAATCCCAGGAGGTaGTTTGCTCTGCAGTGGAGAGTTATCTTGGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: HIYTQTFTNPRR*FALQWRVILAI Trigger: GATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGGGATTGGTGAAAGTTTGGGTGTAAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | ATGGCAGATCCTTGTGAAAAGTTTGGCGACACAGCTTaGCTGACAGCAAACGCACTGTTAGATTTAGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MADPCEKFGDTA*LTANALLDLGG Trigger: ACCACCTAAATCTAACAGTGCGTTTGCTGTCAGCCAAGCTGTGTCGCCAAACTTTTCACAAGGATCTGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TTTACACCCAAACTTTCACCAATCCCAGGAGGTGGTTaGCTCTGCAGTGGAGAGTTATCTTGGCAATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FTPKLSPIPGGG*LCSGELSWQSA Trigger: AGCAGATTGCCAAGATAACTCTCCACTGCAGAGCAAACCACCTCCTGGGATTGGTGAAAGTTTGGGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | GACTCTCCAGCTGTATTAGTTACAGTACTTTGTGGCTGTGACTGGTaGACCACCACAATATTTGACCTCACTGGAGTTGAAATTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DSPAVLVTVLCGCDW*TTTIFDLTGVEIGP Trigger: TGGCCCAATTTCAACTCCAGTGAGGTCAAATATTGTGGTGGTCAACCAGTCACAGCCACAAAGTACTGTAACTAATACAGCTGGAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GCAACATTGGCTGAAAAAGCAATGCCATCTTCATTCTaGGTGTTGTTTACCATGGGCTCCTCAGGTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATLAEKAMPSSF*VLFTMGSSGLS Trigger: GCTCAAACCTGAGGAGCCCATGGTAAACAACACTCAGAATGAAGATGGCATTGCTTTTTCAGCCAATGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | TTCCTTGAAGTACAGGCTGGACTGGAGAAGCAATTATaGTGGCAGATCCTTGTGAAAAGTTTGGCGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: FLEVQAGLEKQL*WQILVKSLATQ Trigger: CTGTGTCGCCAAACTTTTCACAAGGATCTGCCATCATAATTGCTTCTCCAGTCCAGCCTGTACTTCAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | CCAACTACAGACACAGGTATCATTCCCACCATTCCTTaGAGTACAGGCTGGACTGGAGAAGCAATTATGATG | + |
|
Preference number: 6 (lower is better) Translates to: PTTDTGIIPTIP*STGWTGEAIMM Trigger: CATCATAATTGCTTCTCCAGTCCAGCCTGTACTTCAAGGAATGGTGGGAATGATACCTGTGTCTGTAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | CGGGGTCTGATTCTGTCTGCTCCAAAATATCTTGTATaGCTTCTTCAGACATATGGATTTCACTCGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLILSAPKYLV*LLQTYGFHSEG Trigger: GCCTTCCGAGTGAAATCCATATGTCTGAAGAAGCCATACAAGATATTTTGGAGCAGACAGAATCAGACCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | CACCCACAGCCACTTCAGCTTCAGTGGGTATCTGACTaGCGAATAACTCAGAACAATGTTCATTACATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPQPLQLQWVSD*RITQNNVHYIQ Trigger: CTGAATGTAATGAACATTGTTCTGAGTTATTCGCCAGTCAGATACCCACTGAAGCTGAAGTGGCTGTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | ACCTCTGTTGAGTTGCTAGTTTTACCATCAGTATTTTaGGTCTCAGGAGAGACTCCCACTGAACCACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TSVELLVLPSVF*VSGETPTEPPD Trigger: ATCTGGTGGTTCAGTGGGAGTCTCTCCTGAGACCCAAAATACTGATGGTAAAACTAGCAACTCAACAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | TTCTCACCCACAGCCACTTCAGCTTCAGTGGGTATCTaGCTGGCGAATAACTCAGAACAATGTTCATTACAT | + |
|
Preference number: 6 (lower is better) Translates to: FSPTATSASVGI*LANNSEQCSLH Trigger: ATGTAATGAACATTGTTCTGAGTTATTCGCCAGTCAGATACCCACTGAAGCTGAAGTGGCTGTGGGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | CTGATCAGGCTGATACTGAGATTGACTCAGTATATCTaGAGACAAAGAATTCTTCTCACCCACAGCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LIRLILRLTQYI*RQRILLTHSHF Trigger: GAAGTGGCTGTGGGTGAGAAGAATTCTTTGTCTGCAGATATACTGAGTCAATCTCAGTATCAGCCTGATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | CTGTTGCTTTATGGAGAGACTCAAGGGCCACTTCTGTaGGGGAAACTTTCTTTTCAGACTGAACTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLYGETQGPLL*GKLSFQTELLS Trigger: TGAAAGAAGTTCAGTCTGAAAAGAAAGTTTCCCCCACAGAAGTGGCCCTTGAGTCTCTCCATAAAGCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TCCAACTACAGACACAGGTATCATTCCCACCATTCCTaGAAGTACAGGCTGGACTGGAGAAGCAATTATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SNYRHRYHSHHS*KYRLDWRSNYD Trigger: ATCATAATTGCTTCTCCAGTCCAGCCTGTACTTCAAGGAATGGTGGGAATGATACCTGTGTCTGTAGTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | GGCTCTGTCGGGTTGCTGTCTGTCTGCTTAGGTACTTaGGCAACACTACTATCACTAGTCAAAAACTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: GSVGLLSVCLGT*ATLLSLVKNLF Trigger: AAATAAGTTTTTGACTAGTGATAGTAGTGTTGCTCAAGTACCTAAGCAGACAGACAGCAACCCGACAGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | GCTGTATTAGTTACAGTACTTTGTGGCTGTGACTGGTaGACCACCACAATATTTGACCTCACTGGAGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: AVLVTVLCGCDW*TTTIFDLTGVE Trigger: TTCAACTCCAGTGAGGTCAAATATTGTGGTGGTCAACCAGTCACAGCCACAAAGTACTGTAACTAATACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TGGCTCTGTCGGGTTGCTGTCTGTCTGCTTAGGTACTaGAGCAACACTACTATCACTAGTCAAAAACTTATT | + |
|
Preference number: 6 (lower is better) Translates to: WLCRVAVCLLRY*SNTTITSQKLI Trigger: AATAAGTTTTTGACTAGTGATAGTAGTGTTGCTCAAGTACCTAAGCAGACAGACAGCAACCCGACAGAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TCAGTCATACAGGTAGCTATCAGAATGTTACTTGAATaGCCAAACGCTGTGCTTGTGGTAGGCATCAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVIQVAIRMLLE*PNAVLVVGINC Trigger: ACAGTTGATGCCTACCACAAGCACAGCGTTTGGCAATTCAAGTAACATTCTGATAGCTACCTGTATGACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | GCTGTTGAATCAGTCATACAGGTAGCTATCAGAATGTTACTTGAATaGCCAAACGCTGTGCTTGTGGTAGGCATCAACTGTATGTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: AVESVIQVAIRMLLE*PNAVLVVGINCMYP Trigger: AGGATACATACAGTTGATGCCTACCACAAGCACAGCGTTTGGCAATTCAAGTAACATTCTGATAGCTACCTGTATGACTGATTCAACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | TACATTAGACTGACTGACAGTTGGTCCCAAGGCTGTTaGATCAGTCATACAGGTAGCTATCAGAATGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: YIRLTDSWSQGC*ISHTGSYQNVT Trigger: AGTAACATTCTGATAGCTACCTGTATGACTGATTCAACAGCCTTGGGACCAACTGTCAGTCAGTCTAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | GGGAATTTTTCCCAGAGAGAACTAAGTTTTTGTCATTaGTCTCACCACCAAGAGACACAAATGAAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GNFSQRELSFCH*SHHQETQMKSL Trigger: CAGTGACTTCATTTGTGTCTCTTGGTGGTGAGACCAATGACAAAAACTTAGTTCTCTCTGGGAAAAATTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | GAACATCCTGCAGTATTTCTGCCCCAATTAAAGAACTaGCAGGTTTACTCTGCTCTTGTTTTTGATCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EHPAVFLPQLKN*QVYSALVFDPS Trigger: TGAAGGATCAAAAACAAGAGCAGAGTAAACCTGCCAGTTCTTTAATTGGGGCAGAAATACTGCAGGATGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | ATTAAAGAACTGGCAGGTTTACTCTGCTCTTGTTTTTaGTCCTTCACAGTTCCACCTACAGAAGTGGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: IKELAGLLCSCF*SFTVPPTEVAF Trigger: AAATGCCACTTCTGTAGGTGGAACTGTGAAGGATCAAAAACAAGAGCAGAGTAAACCTGCCAGTTCTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS GCA 72 bp | TTCTTTGTAGTGCTCCTTGAAGATGTTCTAAACTGCTaGGTGTTATCTTTTAGAGGAGTTGCTGTAGTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: FFVVLLEDVLNC*VLSFRGVAVVL Trigger: TAGGACTACAGCAACTCCTCTAAAAGATAACACGCAGCAGTTTAGAACATCTTCAAGGAGCACTACAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TGGGAATTTTTCCCAGAGAGAACTAAGTTTTTGTCATaGGTCTCACCACCAAGAGACACAAATGAAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: WEFFPERTKFLS*VSPPRDTNEVT Trigger: AGTGACTTCATTTGTGTCTCTTGGTGGTGAGACCAATGACAAAAACTTAGTTCTCTCTGGGAAAAATTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | AGAGAGACAATACTTGATGCATCTACCTCTGTTGAGTaGCTAGTTTTACCATCAGTATTTTGGGTCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RETILDASTSVE*LVLPSVFWVSG Trigger: TCCTGAGACCCAAAATACTGATGGTAAAACTAGCAACTCAACAGAGGTAGATGCATCAAGTATTGTCTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TTTCGGAGGTCATCTTATACAGTGACCCCTGTGTATTaGCAACAGAAGAAACAGTACTATCGAAACAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FRRSSYTVTPVY*QQKKQYYRNKA Trigger: TGCTTTGTTTCGATAGTACTGTTTCTTCTGTTGCAAATACACAGGGGTCACTGTATAAGATGACCTCCGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | GAGAAGTTTTCCTGGGATTCCTGTGGAAGAACATCATaGCTGTTGCCACTCTTCAAATCATTTAATAATACA | + |
|
Preference number: 6 (lower is better) Translates to: EKFSWDSCGRTS*LLPLFKSFNNT Trigger: TGTATTATTAAATGATTTGAAGAGTGGCAACAGCCATGATGTTCTTCCACAGGAATCCCAGGAAAACTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CCA 72 bp | CTTCAGTTCTCTGCGTATGACATGCTTCTGAAAGACTaGACAAGTTTGTCAAATTATTTACCTGTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQFSAYDMLLKD*TSLSNYLPVFL Trigger: CAGGAAAACAGGTAAATAATTTGACAAACTTGTCCAGTCTTTCAGAAGCATGTCATACGCAGAGAACTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | AGAACAATGTTCATTACATTCAGCAGAGCTTCCTCTTaGGTTAAAGTCACTCAAGTTAGACACAGACTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RTMFITFSRASS*VKVTQVRHRLK Trigger: CTTGAGTCTGTGTCTAACTTGAGTGACTTTAACCAAAGAGGAAGCTCTGCTGAATGTAATGAACATTGTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | AGCTCTGCATCTGAGGAAACAAATGGATCATCACTAATGATAATTTaGAGAGAGACAATACTTGATGCATCTACCTCTGTTGAGTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSASEETNGSSLMII*RETILDASTSVELL Trigger: TAGCAACTCAACAGAGGTAGATGCATCAAGTATTGTCTCTCTCAAAATTATCATTAGTGATGATCCATTTGTTTCCTCAGATGCAGAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TTTTCCTGGGATTCCTGTGGAAGAACATCATGGCTGTaGCCACTCTTCAAATCATTTAATAATACATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSWDSCGRTSWL*PLFKSFNNTSS Trigger: TGAAGATGTATTATTAAATGATTTGAAGAGTGGCAACAGCCATGATGTTCTTCCACAGGAATCCCAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 90 bp | CTTGCAGTTTCTTCTGAAGATAGGCATGTAACAAATTCTGCATTTTaGGCAGGAGATTTAGAAGACAGAATTATCGTTGGTAAGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAVSSEDRHVTNSAF*AGDLEDRIIVGKFS Trigger: AGAAAACTTACCAACGATAATTCTGTCTTCTAAATCTCCTGCCAAAAATGCAGAATTTGTTACATGCCTATCTTCAGAAGAAACTGCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS TCA 72 bp | ACTGATACTAGACACAGCACTGTTAAGCTCTGCATCTaGGGAAACAAATGGATCATCACTAATGATAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: TDTRHSTVKLCI*GNKWIITNDNF Trigger: AAAATTATCATTAGTGATGATCCATTTGTTTCCTCAGATGCAGAGCTTAACAGTGCTGTGTCTAGTATCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||
| CDS CAA 72 bp | TCTGAGGAAACAAATGGATCATCACTAATGATAATTTaGAGAGAGACAATACTTGATGCATCTACCTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SEETNGSSLMII*RETILDASTSV Trigger: AACAGAGGTAGATGCATCAAGTATTGTCTCTCTCAAAATTATCATTAGTGATGATCCATTTGTTTCCTCAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035850.8 |
||